View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14212_low_19 (Length: 264)

Name: NF14212_low_19
Description: NF14212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14212_low_19
NF14212_low_19
[»] chr3 (53 HSPs)
chr3 (9-234)||(52419439-52419673)
chr3 (92-235)||(18199234-18199378)
chr3 (92-231)||(36093974-36094114)
chr3 (92-242)||(6953822-6953971)
chr3 (92-213)||(36094165-36094287)
chr3 (92-232)||(26943588-26943729)
chr3 (95-238)||(31483532-31483677)
chr3 (92-187)||(6953301-6953395)
chr3 (92-187)||(36947735-36947829)
chr3 (92-187)||(36947874-36947968)
chr3 (95-234)||(26943872-26944012)
chr3 (95-229)||(1883354-1883489)
chr3 (92-187)||(6953683-6953777)
chr3 (115-208)||(18256807-18256901)
chr3 (95-229)||(36091019-36091154)
chr3 (92-179)||(855064-855151)
chr3 (92-187)||(6953440-6953534)
chr3 (9-82)||(38656568-38656641)
chr3 (115-229)||(17657115-17657231)
chr3 (95-171)||(35713141-35713217)
chr3 (115-187)||(36947619-36947690)
chr3 (95-171)||(47724552-47724628)
chr3 (95-171)||(11823954-11824030)
chr3 (95-171)||(18199154-18199230)
chr3 (92-160)||(36948013-36948081)
chr3 (95-171)||(49566006-49566082)
chr3 (115-239)||(13458635-13458762)
chr3 (89-160)||(18199401-18199472)
chr3 (115-238)||(12257813-12257939)
chr3 (139-231)||(26943780-26943873)
chr3 (142-209)||(851130-851198)
chr3 (115-229)||(4585473-4585589)
chr3 (115-171)||(18256686-18256742)
chr3 (92-160)||(36093883-36093951)
chr3 (115-238)||(16647383-16647509)
chr3 (93-171)||(38662187-38662264)
chr3 (95-164)||(43509713-43509782)
chr3 (95-171)||(26943025-26943101)
chr3 (92-160)||(26949097-26949165)
chr3 (95-171)||(33006068-33006143)
chr3 (95-171)||(36094925-36095001)
chr3 (13-84)||(18255625-18255696)
chr3 (95-160)||(38662154-38662219)
chr3 (115-171)||(851252-851308)
chr3 (95-171)||(35860543-35860619)
chr3 (95-171)||(36095140-36095216)
chr3 (92-140)||(6953579-6953627)
chr3 (92-139)||(854955-855002)
chr3 (115-144)||(4585618-4585647)
chr3 (115-144)||(12257968-12257997)
chr3 (115-144)||(13458577-13458606)
chr3 (139-171)||(26943554-26943586)
chr3 (139-171)||(36094306-36094338)
[»] chr1 (44 HSPs)
chr1 (92-234)||(35598166-35598309)
chr1 (92-235)||(39514217-39514361)
chr1 (92-231)||(2052075-2052215)
chr1 (93-234)||(35597733-35597874)
chr1 (95-229)||(36455163-36455298)
chr1 (92-179)||(45507264-45507351)
chr1 (92-234)||(45507413-45507556)
chr1 (9-84)||(29244833-29244908)
chr1 (95-234)||(13929144-13929284)
chr1 (95-234)||(42492406-42492546)
chr1 (95-235)||(9529986-9530127)
chr1 (95-209)||(7475985-7476100)
chr1 (95-229)||(15689166-15689301)
chr1 (95-171)||(22194875-22194951)
chr1 (95-171)||(22195045-22195121)
chr1 (95-166)||(48647756-48647827)
chr1 (95-171)||(7476585-7476661)
chr1 (95-171)||(48958565-48958641)
chr1 (115-229)||(49791089-49791205)
chr1 (115-229)||(49791466-49791582)
chr1 (95-171)||(50704586-50704662)
chr1 (95-166)||(15689392-15689463)
chr1 (9-84)||(23089921-23089996)
chr1 (92-160)||(2051984-2052052)
chr1 (95-171)||(2585415-2585491)
chr1 (95-171)||(45507086-45507162)
chr1 (92-171)||(49791622-49791701)
chr1 (95-171)||(2052573-2052649)
chr1 (127-229)||(49792030-49792134)
chr1 (89-160)||(35597695-35597765)
chr1 (89-160)||(35598072-35598143)
chr1 (13-84)||(37892184-37892255)
chr1 (92-171)||(49791898-49791977)
chr1 (102-160)||(39514136-39514194)
chr1 (143-235)||(38211808-38211901)
chr1 (115-171)||(2051787-2051843)
chr1 (115-171)||(36871047-36871103)
chr1 (127-229)||(49791754-49791858)
chr1 (135-187)||(26209950-26210001)
chr1 (185-234)||(26209152-26209201)
chr1 (134-171)||(2052217-2052254)
chr1 (9-42)||(13926932-13926965)
chr1 (115-144)||(49791031-49791060)
chr1 (115-144)||(49791408-49791437)
[»] chr6 (10 HSPs)
chr6 (89-238)||(3589178-3589328)
chr6 (95-229)||(2271793-2271928)
chr6 (95-229)||(24456370-24456505)
chr6 (95-171)||(33049731-33049807)
chr6 (95-166)||(29371697-29371768)
chr6 (115-164)||(29374269-29374318)
chr6 (115-222)||(29920973-29921082)
chr6 (119-171)||(33007319-33007371)
chr6 (13-84)||(25976129-25976200)
chr6 (13-84)||(25971689-25971760)
[»] chr5 (27 HSPs)
chr5 (92-231)||(23179426-23179566)
chr5 (92-213)||(23179253-23179375)
chr5 (89-237)||(20844633-20844782)
chr5 (92-234)||(20844880-20845023)
chr5 (92-234)||(20842238-20842381)
chr5 (95-235)||(12651227-12651368)
chr5 (95-235)||(39874107-39874248)
chr5 (92-179)||(20844445-20844532)
chr5 (95-171)||(10037189-10037265)
chr5 (115-238)||(20109908-20110034)
chr5 (95-171)||(23178415-23178491)
chr5 (95-171)||(23184344-23184420)
chr5 (92-160)||(32672849-32672917)
chr5 (95-171)||(34757338-34757414)
chr5 (92-179)||(20842443-20842530)
chr5 (92-179)||(20845085-20845172)
chr5 (92-179)||(32672740-32672826)
chr5 (95-165)||(23180082-23180152)
chr5 (115-229)||(3611854-3611970)
chr5 (115-229)||(20109140-20109256)
chr5 (92-160)||(23179589-23179657)
chr5 (95-171)||(23178673-23178749)
chr5 (115-229)||(30094377-30094493)
chr5 (95-164)||(32671996-32672065)
chr5 (13-84)||(38096160-38096231)
chr5 (115-144)||(3611796-3611825)
chr5 (139-179)||(20844841-20844881)
[»] chr4 (43 HSPs)
chr4 (92-231)||(41862222-41862362)
chr4 (92-234)||(41946739-41946884)
chr4 (92-231)||(22673728-22673868)
chr4 (92-231)||(52680154-52680294)
chr4 (95-229)||(35756364-35756499)
chr4 (95-238)||(28380189-28380334)
chr4 (95-222)||(30390829-30390957)
chr4 (92-194)||(41862413-41862516)
chr4 (95-241)||(42345058-42345193)
chr4 (95-171)||(16905836-16905912)
chr4 (95-171)||(29363856-29363932)
chr4 (95-171)||(42345238-42345314)
chr4 (92-164)||(53285650-53285722)
chr4 (95-166)||(21380325-21380396)
chr4 (115-238)||(14148580-14148706)
chr4 (11-84)||(29359850-29359923)
chr4 (92-160)||(22673893-22673961)
chr4 (115-229)||(25819623-25819739)
chr4 (95-171)||(29363528-29363604)
chr4 (95-171)||(29363735-29363811)
chr4 (92-160)||(41861949-41862017)
chr4 (92-160)||(41862040-41862108)
chr4 (92-160)||(41862131-41862199)
chr4 (9-84)||(36896297-36896372)
chr4 (115-229)||(19518516-19518632)
chr4 (115-229)||(21585332-21585448)
chr4 (92-160)||(41946648-41946716)
chr4 (95-171)||(52679741-52679817)
chr4 (92-160)||(52680317-52680385)
chr4 (95-171)||(53285763-53285839)
chr4 (89-160)||(41946554-41946625)
chr4 (95-171)||(41863165-41863241)
chr4 (95-171)||(22673294-22673370)
chr4 (115-171)||(14148434-14148490)
chr4 (134-229)||(9334004-9334101)
chr4 (89-140)||(41946495-41946546)
chr4 (134-171)||(22673689-22673726)
chr4 (130-171)||(29363649-29363690)
chr4 (134-164)||(52680122-52680152)
chr4 (115-144)||(14148522-14148551)
chr4 (115-144)||(19518458-19518487)
chr4 (115-144)||(21585274-21585303)
chr4 (115-144)||(25819768-25819797)
[»] scaffold0160 (3 HSPs)
scaffold0160 (92-234)||(36015-36158)
scaffold0160 (92-179)||(36220-36306)
scaffold0160 (102-179)||(36368-36445)
[»] chr7 (35 HSPs)
chr7 (92-241)||(29954180-29954329)
chr7 (92-231)||(22004400-22004540)
chr7 (92-235)||(13927056-13927199)
chr7 (92-231)||(22004209-22004349)
chr7 (92-231)||(7891177-7891317)
chr7 (95-229)||(20959400-20959535)
chr7 (95-238)||(32656621-32656766)
chr7 (95-237)||(7884872-7885015)
chr7 (113-195)||(3600051-3600132)
chr7 (95-229)||(45112654-45112789)
chr7 (115-235)||(26161860-26161981)
chr7 (92-234)||(3061595-3061725)
chr7 (92-164)||(5090921-5090993)
chr7 (95-171)||(13400704-13400780)
chr7 (92-179)||(13927381-13927466)
chr7 (115-229)||(27712639-27712755)
chr7 (92-166)||(3600159-3600233)
chr7 (95-171)||(5091034-5091110)
chr7 (95-171)||(7890743-7890819)
chr7 (92-160)||(22004563-22004631)
chr7 (96-166)||(7889201-7889271)
chr7 (92-160)||(7891340-7891408)
chr7 (95-171)||(22003511-22003587)
chr7 (92-187)||(31097942-31098036)
chr7 (20-82)||(26168243-26168305)
chr7 (95-171)||(32656790-32656866)
chr7 (115-171)||(32035234-32035290)
chr7 (115-171)||(16719033-16719089)
chr7 (115-171)||(17693243-17693299)
chr7 (134-171)||(7891138-7891175)
chr7 (92-140)||(13927271-13927319)
chr7 (187-234)||(31095117-31095164)
chr7 (115-144)||(16719118-16719147)
chr7 (115-144)||(17693328-17693357)
chr7 (115-144)||(27712784-27712813)
[»] chr2 (56 HSPs)
chr2 (92-210)||(35433149-35433268)
chr2 (92-213)||(13905710-13905832)
chr2 (92-231)||(13899794-13899934)
chr2 (92-231)||(26453329-26453469)
chr2 (92-231)||(40603165-40603305)
chr2 (92-209)||(27999664-27999782)
chr2 (92-209)||(28090398-28090516)
chr2 (92-209)||(28096721-28096839)
chr2 (92-234)||(1925653-1925796)
chr2 (95-241)||(180135-180282)
chr2 (95-229)||(204301-204436)
chr2 (115-235)||(1501725-1501846)
chr2 (95-234)||(980034-980174)
chr2 (95-234)||(2444055-2444195)
chr2 (95-229)||(13899037-13899172)
chr2 (92-187)||(32287396-32287490)
chr2 (92-178)||(32287265-32287351)
chr2 (115-183)||(35433023-35433092)
chr2 (95-229)||(14039654-14039789)
chr2 (95-171)||(19640906-19640982)
chr2 (95-171)||(19839499-19839575)
chr2 (115-229)||(25643677-25643793)
chr2 (9-84)||(4998137-4998212)
chr2 (9-84)||(5014213-5014288)
chr2 (102-179)||(1925514-1925591)
chr2 (95-171)||(980487-980563)
chr2 (95-171)||(5001131-5001207)
chr2 (95-171)||(5012801-5012877)
chr2 (95-171)||(26452895-26452971)
chr2 (95-171)||(36440114-36440190)
chr2 (92-162)||(40603325-40603395)
chr2 (9-82)||(1512154-1512227)
chr2 (115-237)||(2296907-2297032)
chr2 (92-160)||(13905855-13905923)
chr2 (95-171)||(19641068-19641144)
chr2 (95-171)||(19839661-19839737)
chr2 (92-160)||(26453492-26453560)
chr2 (95-166)||(42111679-42111750)
chr2 (118-229)||(13899992-13900105)
chr2 (95-171)||(21591195-21591271)
chr2 (95-171)||(40602731-40602807)
chr2 (161-230)||(1271944-1272014)
chr2 (92-178)||(32287001-32287087)
chr2 (115-171)||(6120837-6120893)
chr2 (145-210)||(35433287-35433353)
chr2 (95-144)||(980282-980331)
chr2 (134-171)||(26453290-26453327)
chr2 (134-171)||(40603126-40603163)
chr2 (92-140)||(32287143-32287191)
chr2 (160-209)||(27999854-27999904)
chr2 (160-209)||(28090588-28090638)
chr2 (160-209)||(28096911-28096961)
chr2 (115-144)||(2297061-2297090)
chr2 (115-144)||(6120922-6120951)
chr2 (115-144)||(25643822-25643851)
chr2 (139-171)||(13899759-13899791)
[»] scaffold0121 (5 HSPs)
scaffold0121 (92-231)||(41126-41266)
scaffold0121 (95-171)||(40825-40901)
scaffold0121 (92-160)||(41289-41357)
scaffold0121 (92-160)||(41380-41448)
scaffold0121 (139-171)||(41086-41118)
[»] chr8 (15 HSPs)
chr8 (95-229)||(19958010-19958145)
chr8 (95-238)||(21636993-21637138)
chr8 (115-229)||(410108-410224)
chr8 (115-187)||(18489801-18489872)
chr8 (95-171)||(18489931-18490007)
chr8 (92-164)||(22732217-22732289)
chr8 (95-171)||(24014126-24014202)
chr8 (95-171)||(37985456-37985532)
chr8 (115-171)||(18278561-18278617)
chr8 (95-164)||(24011222-24011291)
chr8 (123-171)||(37985586-37985634)
chr8 (95-147)||(41377822-41377874)
chr8 (115-144)||(410050-410079)
chr8 (190-235)||(18492665-18492710)
chr8 (185-229)||(24011299-24011343)
[»] scaffold0097 (3 HSPs)
scaffold0097 (95-234)||(44644-44784)
scaffold0097 (130-164)||(48794-48828)
scaffold0097 (139-171)||(51514-51546)
[»] scaffold0642 (2 HSPs)
scaffold0642 (115-229)||(243-359)
scaffold0642 (115-144)||(388-417)
[»] scaffold0345 (2 HSPs)
scaffold0345 (115-229)||(10154-10270)
scaffold0345 (115-144)||(10299-10328)
[»] scaffold0105 (2 HSPs)
scaffold0105 (115-229)||(28710-28826)
scaffold0105 (115-144)||(28652-28681)
[»] scaffold1113 (1 HSPs)
scaffold1113 (95-171)||(2488-2564)
[»] scaffold0374 (2 HSPs)
scaffold0374 (115-229)||(117-233)
scaffold0374 (115-144)||(59-88)
[»] scaffold0119 (2 HSPs)
scaffold0119 (161-230)||(29223-29293)
scaffold0119 (161-230)||(35476-35546)


Alignment Details
Target: chr3 (Bit Score: 148; Significance: 3e-78; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 234
Target Start/End: Original strand, 52419439 - 52419673
Alignment:
Q  9 tctactttgaaaatattatgctttaccaatgtttcctaacaaatttgggtaagtgttgtcaacgatagatgcaataa-----------cttggaaaatta 97  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||| ||||||||||||||           ||||||||||||    
T  52419439 tctactttgaaaatattatgctt--ccaatgtttcctaacaaatttgggtaagtgctgtcaatgatagatgcaataagattacctgaacttggaaaatta 52419536  T
Q  98 ggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaatattaggtat 197  Q
    |||||||||| ||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52419537 ggaaatcatggttaggatttggagaaggggaattagaaaatatggttaggttttgaaggagggaaaagtggctacgatttttaggttaaatattaggtat 52419636  T
Q  198 aattagggcaacaatgctttgtttatgaataaaagat 234  Q
    ||||| ||||||| |||||||||||||||||| ||||    
T  52419637 aattaaggcaacagtgctttgtttatgaataagagat 52419673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 92 - 235
Target Start/End: Complemental strand, 18199378 - 18199234
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  18199378 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatat 18199279  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaagata 235  Q
    |||||  |||||||||||||||| |  |||||| |||||||||||    
T  18199278 taggtggaattagggcaacaatgttaggtttataaataaaagata 18199234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 92 - 231
Target Start/End: Original strand, 36093974 - 36094114
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  36093974 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatat 36094073  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaa 231  Q
    |||||  |||||||||||||||| |  |||||| |||||||    
T  36094074 taggtggaattagggcaacaatgttaggtttataaataaaa 36094114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 92 - 242
Target Start/End: Original strand, 6953822 - 6953971
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatat 190  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||||||    
T  6953822 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttagattttgaaggagggaaaagt-gctacaa-ttttaggttaaaatat 6953919  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaagataagagatg 242  Q
    || ||||||||||||||| | || |||| ||| |||||| ||||||||||||    
T  6953920 taagtataattagggcaagagtgttttgcttaggaataagagataagagatg 6953971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 92 - 213
Target Start/End: Original strand, 36094165 - 36094287
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | || ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  36094165 aaattaggaaatcatggttagggttgggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctataattttttaggttaaatat 36094264  T
Q  191 taggtataattagggcaacaatg 213  Q
    |||||  ||||||||||||||||    
T  36094265 taggtggaattagggcaacaatg 36094287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 92 - 232
Target Start/End: Complemental strand, 26943729 - 26943588
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||| ||||||||| ||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  26943729 aaattaagaaatcatggttagggtttggaggaggggaattagtaaatatggttaggttttgaaggagggaaaagtgactataattttttaggttaaatat 26943630  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaag 232  Q
    |||||  ||||| |||||||||| |  |||||| ||||||||    
T  26943629 taggtggaattatggcaacaatgttaggtttataaataaaag 26943588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 95 - 238
Target Start/End: Complemental strand, 31483677 - 31483532
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattag 193  Q
    ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| || | ||||||| |||||||||    
T  31483677 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtttcta-aaatattaggttaaaatattag 31483579  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataa-aagataaga 238  Q
    | || |||||||||||||| |||||||||| |||||| |||||||||    
T  31483578 gttaaaattagggcaacaaagctttgtttaggaataagaagataaga 31483532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 6953301 - 6953395
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa 187  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  6953301 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggttacaa-ttttaggttaaa 6953395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 36947735 - 36947829
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa 187  Q
    |||||||||||||||| ||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36947735 aaattaggaaatcatggttagggtttggaggaggggtattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-ttttaggttaaa 36947829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 36947874 - 36947968
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa 187  Q
    |||||||||||||||| ||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36947874 aaattaggaaatcatggttagggtttggaggaggggtattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-ttttaggttaaa 36947968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 234
Target Start/End: Complemental strand, 26944012 - 26943872
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||    
T  26944012 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgctaaaatatt-aggttaaaatattag 26943914  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataaaagat 234  Q
    | || |||||||||||| | |||||||||| |||||| ||||    
T  26943913 gttaaaattagggcaaccaagctttgtttaggaataagagat 26943872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 95 - 229
Target Start/End: Original strand, 1883354 - 1883489
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||  ||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||    
T  1883354 ttaggaaatcatagttagggtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaagttgctaaaatatt-aggttaaaatattag 1883452  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataa 229  Q
    | || |||||||||||||| |||||||||| ||||||    
T  1883453 gttaaaattagggcaacaaagctttgtttaggaataa 1883489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 6953683 - 6953777
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa 187  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  6953683 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatagttaggttttgaaggagggaaaagtggttacaa-ttttaggttaaa 6953777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 18256807 - 18256901
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatattaggtataattagggcaa 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||  ||||| |||||    
T  18256807 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtgactacaattttttagcttaaatattaggtggaattacggcaa 18256901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 95 - 229
Target Start/End: Original strand, 36091019 - 36091154
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||    
T  36091019 ttaggaaatcatggttagggtttggaggagaggaactagggaatatggttaggttttgaaggagggaaaagttgctaaaatatt-aggttaaaatattag 36091117  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataa 229  Q
    | || |||||||||||||| |||||||||| ||||||    
T  36091118 gttaaaattagggcaacaaagctttgtttaggaataa 36091154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 855151 - 855064
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaattttt 179  Q
    |||||||||||||||  |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  855151 aaattaggaaatcatagttagagtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtgtctacaattttt 855064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 6953440 - 6953534
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa 187  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| ||||||||||||    
T  6953440 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttaagggagggaaaagtggttacaa-ttttaggttaaa 6953534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 38656568 - 38656641
Alignment:
Q  9 tctactttgaaaatattatgctttaccaatgtttcctaacaaatttgggtaagtgttgtcaacgatagatgcaa 82  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  38656568 tctactttgaaaatattttgctttaccaatgtttcctaacaaatttgggtaagtgctatcaacgatagatgcaa 38656641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 17657231 - 17657115
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| ||| ||  |||| |||||||||| || ||||||||||||||     
T  17657231 tttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgctaaaatattagggttaaaatattaggttaaaattagggcaacaaa 17657132  T
Q  213 gctttgtttatgaataa 229  Q
    |||||||||| ||||||    
T  17657131 gctttgtttaggaataa 17657115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 35713217 - 35713141
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35713217 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 35713141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 36947619 - 36947690
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa 187  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36947619 tttggaggaggggaatttggaaatatggttaggttttgaaggagggaaaagtggctacaa-ttttaggttaaa 36947690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 47724628 - 47724552
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47724628 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 47724552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 11824030 - 11823954
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11824030 ttaggaaatcatggttagggtttggagaaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 11823954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 18199154 - 18199230
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  18199154 ttaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagttgcta 18199230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 36948013 - 36948081
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  36948013 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 36948081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 49566006 - 49566082
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  49566006 ttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgaaggagggaaaagttgcta 49566082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 115 - 239
Target Start/End: Original strand, 13458635 - 13458762
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| |||  |  |||| |||||||||| || |||||||||||| |     
T  13458635 tttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgctaaaataatagggttaaaatattaggttaaaattagggcaaccaa 13458734  T
Q  213 gctttgtttatgaataa-aagataagag 239  Q
    |||||||||| |||||| ||||||||||    
T  13458735 gctttgtttaggaataagaagataagag 13458762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 18199472 - 18199401
Alignment:
Q  89 ggaaaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    ||||||||| ||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  18199472 ggaaaattaagaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 18199401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 238
Target Start/End: Complemental strand, 12257939 - 12257813
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||  ||| ||| ||  |||| |||||||||| || ||||| ||||||||     
T  12257939 tttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttactaaaatattagggttaaaatattaggttaaaattaaggcaacaaa 12257840  T
Q  213 gctttgtttatgaataa-aagataaga 238  Q
    |||||||||| |||||| |||||||||    
T  12257839 gctttgtttaggaataagaagataaga 12257813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 26943873 - 26943780
Alignment:
Q  139 atggttaggttttgaaggagggaaaagtggctacaattttt-aggttaaatattaggtataattagggcaacaatgctttgtttatgaataaaa 231  Q
    |||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||  |||||||||||||||| |  |||||| |||||||    
T  26943873 atgggtaggttttgaaggagggaaaagtggctataattttttaggttaaatattaggtggaattagggcaacaatgttaggtttataaataaaa 26943780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 851198 - 851130
Alignment:
Q  142 gttaggttttgaaggagggaaaagtggctacaat-ttttaggttaaatattaggtataattagggcaac 209  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||    
T  851198 gttaggttttgaaggagggaaaagtggctacaattttttaggttaaatattaggtggaattagggcaac 851130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 4585589 - 4585473
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| ||| ||  |||| |||||||||| || ||||||||| ||||     
T  4585589 tttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgctaaaatattagggttaaaatattaggttaaaattagggctacaaa 4585490  T
Q  213 gctttgtttatgaataa 229  Q
    | |||||||| ||||||    
T  4585489 gttttgtttaggaataa 4585473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 18256686 - 18256742
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18256686 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 18256742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 36093883 - 36093951
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||||||||||||| ||| | |||||||||||||||||| |||||||||||||||||||||||||||    
T  36093883 aaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggttaggttttgaaggaggg 36093951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 115 - 238
Target Start/End: Complemental strand, 16647509 - 16647383
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||| | |||| |||  |  |||| |||||||||| || |||||||||||| |     
T  16647509 tttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaaattgctaaaataatagggttaaaatattaggttaaaattagggcaaccaa 16647410  T
Q  213 gctttgtttatgaataa-aagataaga 238  Q
    |||||||||| |||||| |||||||||    
T  16647409 gctttgtttaggaataagaagataaga 16647383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 38662187 - 38662264
Alignment:
Q  93 aattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||| ||| ||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  38662187 aattaggaaat-atggttaggttttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagttgcta 38662264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 43509713 - 43509782
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 164  Q
    ||||||||||||| ||  | |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43509713 ttaggaaatcatggttggggtttggaggagggaaattaggaaatatggttaggttttgaaggagggaaaa 43509782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 26943101 - 26943025
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    |||| |||||||| ||| | |||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||    
T  26943101 ttagaaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaagttgcta 26943025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 26949165 - 26949097
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||||||||||||| |||   |||||||||||||| |||||||||||||||||||||||||||||||    
T  26949165 aaattaggaaatcatggttagagtttggaggaggggagttaggaaatatggttaggttttgaaggaggg 26949097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 33006068 - 33006143
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||| ||| ||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  33006068 ttaggaaatgatggttagggtttggaggaggggaattaggaaata-ggttaggttttgaaggagggaaaagttgcta 33006143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 36094925 - 36095001
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||    
T  36094925 ttaggaaatcatggttagggtttggaggagggaaattaggaaatatagttaggttttgatggagggaaaagttgcta 36095001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 18255696 - 18255625
Alignment:
Q  13 ctttgaaaatattatgctttaccaatgtttcctaacaaatttgggtaagtgttgtcaacgatagatgcaata 84  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||| | | ||| ||||||||||||    
T  18255696 ctttgaaaatattctgctttaccaatgtgtcctaacaaatttgggtaagtgctttgaacaatagatgcaata 18255625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 38662154 - 38662219
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||| |||||||  ||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  38662154 ttagaaaatcattgttatggtttggaggaggggaattaggaaatatggttaggttttggaggaggg 38662219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 851308 - 851252
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  851308 tttggaggaggggaattagagaatatggttaggttttgaaggagggaaaagttgcta 851252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 35860543 - 35860619
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| |||   ||||||||| || |||||||||||||||||||||||| |||||||||||||| ||||    
T  35860543 ttaggaaatcatggttagcgtttggaggaaggaaattaggaaatatggttaggttttaaaggagggaaaagttgcta 35860619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 36095140 - 36095216
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| |||   ||||||||| || |||||||||||||||||||||||| |||||||||||||| ||||    
T  36095140 ttaggaaatcatggttagcgtttggaggaaggaaattaggaaatatggttaggttttaaaggagggaaaagttgcta 36095216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 6953579 - 6953627
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatat 140  Q
    ||||||| |||||||| ||| | ||||||||||||||||||||||||||    
T  6953579 aaattagaaaatcatggttagggtttggaggaggggaattaggaaatat 6953627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 855002 - 854955
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaata 139  Q
    |||||||||||||||| ||| | ||||||||||||||||||| |||||    
T  855002 aaattaggaaatcatggttagggtttggaggaggggaattagaaaata 854955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Complemental strand, 4585647 - 4585618
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  4585647 tttggaggaggggaattaggaaatatggtt 4585618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Complemental strand, 12257997 - 12257968
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  12257997 tttggaggaggggaattaggaaatatggtt 12257968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Original strand, 13458577 - 13458606
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  13458577 tttggaggaggggaattaggaaatatggtt 13458606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 26943586 - 26943554
Alignment:
Q  139 atggttaggttttgaaggagggaaaagtggcta 171  Q
    |||||||||||||||||||||||||||| ||||    
T  26943586 atggttaggttttgaaggagggaaaagttgcta 26943554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 36094306 - 36094338
Alignment:
Q  139 atggttaggttttgaaggagggaaaagtggcta 171  Q
    |||||||||||||||||||||||||||| ||||    
T  36094306 atggttaggttttgaaggagggaaaagttgcta 36094338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 92 - 234
Target Start/End: Original strand, 35598166 - 35598309
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  35598166 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatat 35598265  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaagat 234  Q
    |||||  |||||||||||||||| |  |||||| ||||||||||    
T  35598266 taggtggaattagggcaacaatgttaggtttataaataaaagat 35598309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 39514217 - 39514361
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  39514217 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatat 39514316  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaagata 235  Q
    |||||  || |||||||||| || |  |||||| |||||||||||    
T  39514317 taggtggaactagggcaacattgttaggtttataaataaaagata 39514361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 92 - 231
Target Start/End: Original strand, 2052075 - 2052215
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||    
T  2052075 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctataattttttaggttaaatat 2052174  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaa 231  Q
    ||| |  |||||||||||||||| |  |||||| |||||||    
T  2052175 tagttggaattagggcaacaatgttaggtttataaataaaa 2052215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 93 - 234
Target Start/End: Original strand, 35597733 - 35597874
Alignment:
Q  93 aattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatatt 191  Q
    ||||||||||| ||| ||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  35597733 aattaggaaat-atggttagggtttggaggaggggaattaggaaatatgattaggttttgaaggagggaaaagtggctataattttttaggttaaatatt 35597831  T
Q  192 aggtataattagggcaacaatgctttgtttatgaataaaagat 234  Q
    ||||  |||||||||||||||  |  |||||| ||||||||||    
T  35597832 aggtggaattagggcaacaattttaggtttataaataaaagat 35597874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 95 - 229
Target Start/End: Complemental strand, 36455298 - 36455163
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||    
T  36455298 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgctaaaatatt-aggttaaaatattag 36455200  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataa 229  Q
    | || |||||||||||||| |||||||||| ||||||    
T  36455199 gttaaaattagggcaacaaagctttgtttaggaataa 36455163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 92 - 179
Target Start/End: Original strand, 45507264 - 45507351
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaattttt 179  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45507264 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaattttt 45507351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 92 - 234
Target Start/End: Original strand, 45507413 - 45507556
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctaca--atttttaggttaaata 189  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||  ||||||||||||||||    
T  45507413 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatagttaggttttgaagaaaggaaaaatggctacaatatttttaggttaaata 45507512  T
Q  190 ttaggtataattagggcaacaatgctttgtttatgaataaaagat 234  Q
    ||||||  ||||||| |||||||| |  |||||| ||||||||||    
T  45507513 ttaggt-gaattaggacaacaatgttaggtttataaataaaagat 45507556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 29244908 - 29244833
Alignment:
Q  9 tctactttgaaaatattatgctttaccaatgtttcctaacaaatttgggtaagtgttgtcaacgatagatgcaata 84  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29244908 tctactttgaaaatattctgctttaccaatgtttcctaacaaatttgggtaagtgttgtcaacgatagatgcaata 29244833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 13929144 - 13929284
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | ||||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||    
T  13929144 ttaggaaatcatggttagggtttggaggaggggaatttggtaatatggttaggttttgaaggagggaaaagttgctaaaatatt-aggttaaaatattag 13929242  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataaaagat 234  Q
    | || |||||||||||||| |||||||||| |||||| ||||    
T  13929243 gttaaaattagggcaacaaagctttgtttaggaataagagat 13929284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 234
Target Start/End: Complemental strand, 42492546 - 42492406
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||    
T  42492546 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgctaaaatatt-aggttaaaatattag 42492448  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataaaagat 234  Q
    | || |||||||||||| | |||||||||| |||||| ||||    
T  42492447 gttaaaattagggcaaccaagctttgtttaggaataagagat 42492406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 95 - 235
Target Start/End: Complemental strand, 9530127 - 9529986
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||    
T  9530127 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgctaaaatatt-aggttaaaatattag 9530029  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataaaagata 235  Q
    | || |||||||||||| |  ||||||||| |||||| |||||    
T  9530028 gttaaaattagggcaaccaaactttgtttaggaataagagata 9529986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 209
Target Start/End: Complemental strand, 7476100 - 7475985
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||    
T  7476100 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgctaaaatatt-aggttaaaatattag 7476002  T
Q  194 g-tataattagggcaac 209  Q
    | || ||||||||||||    
T  7476001 gttaaaattagggcaac 7475985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 229
Target Start/End: Complemental strand, 15689301 - 15689166
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattag 193  Q
    ||||||||||||  ||| | ||||||||||| |||||||||||||||||||||||||||||||||||||| | |||| || | ||||||| |||||||||    
T  15689301 ttaggaaatcatagttagggtttggaggaggagaattaggaaatatggttaggttttgaaggagggaaaatttgcta-aaatattaggttaaaatattag 15689203  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataa 229  Q
    | || ||||||||||||||  ||||||||| ||||||    
T  15689202 gttaaaattagggcaacaaaactttgtttaggaataa 15689166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 22194951 - 22194875
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22194951 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 22194875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 22195121 - 22195045
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22195121 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 22195045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 48647827 - 48647756
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 166  Q
    ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48647827 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 48647756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 7476661 - 7476585
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7476661 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 7476585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 48958641 - 48958565
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  48958641 ttaggaaatcatggttagggtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaagttgcta 48958565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 49791089 - 49791205
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||||||||||| |||| ||| ||  |||| |||||||||| || ||||||||||||||     
T  49791089 tttggaggaggagaattaggaaatatggttaagttttaaaggagggaaaagttgctaaaatattagggttaaaatattaggttaaaattagggcaacaaa 49791188  T
Q  213 gctttgtttatgaataa 229  Q
    |||||||||| ||||||    
T  49791189 gctttgtttaggaataa 49791205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 49791466 - 49791582
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||||||||||| |||| ||| ||  |||| |||||||||| || ||||||||||||||     
T  49791466 tttggaggaggagaattaggaaatatggttaagttttaaaggagggaaaagttgctaaaatattagggttaaaatattaggttaaaattagggcaacaaa 49791565  T
Q  213 gctttgtttatgaataa 229  Q
    |||||||||| ||||||    
T  49791566 gctttgtttaggaataa 49791582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 50704662 - 50704586
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  50704662 ttaggaaatcatggttagagtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 50704586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 15689463 - 15689392
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 166  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15689463 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagt 15689392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 23089921 - 23089996
Alignment:
Q  9 tctactttgaaaatattatgctttaccaatgtttcctaacaaatttgggtaagtgttgtcaacgatagatgcaata 84  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||| | ||||| ||||||||||||    
T  23089921 tctactttgaaaatattctgctttaccaatgtttcctaacaaatttggttaagtgctttcaacaatagatgcaata 23089996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 2051984 - 2052052
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| ||||||||    
T  2051984 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttaaaggaggg 2052052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 2585491 - 2585415
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  2585491 ttaggaaatcatggttagggtttagaggaggggaattagggaatatggttaggttttgaaggagggaaaagttgcta 2585415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 45507086 - 45507162
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | ||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||    
T  45507086 ttaggaaatcatggttagggtttggaggaagggaattagggaatatggttaggttttgaaggagggaaaagttgcta 45507162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 49791622 - 49791701
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    |||||||||||||||| ||| | |||||| ||| ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  49791622 aaattaggaaatcatggttagggtttggaagagaggaattaggaaatatcgttaggttttgaaggagggaaaagttgcta 49791701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 2052573 - 2052649
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||| ||| ||| | |||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  2052573 ttaggaaattatggttagggtttggaggagggaaattagaaaatatggttaggttttgaaggagggaaaagttgcta 2052649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 229
Target Start/End: Original strand, 49792030 - 49792134
Alignment:
Q  127 gaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaatgctttgtttatg 224  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||| ||| ||  |||| |||||||||| || |||||||||||||| |||||||||| |    
T  49792030 gaattaggaaatatggttaagttttaaaggagggaaaagttgctaaaatattagggttaaaatattaggttaaaattagggcaacaaagctttgtttagg 49792129  T
Q  225 aataa 229  Q
    |||||    
T  49792130 aataa 49792134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 35597695 - 35597765
Alignment:
Q  89 ggaaaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||| |||||||    
T  35597695 ggaaaattaggaaatcatggttaggatttggagga-gggaattaggaaatatggttagggtttggaggaggg 35597765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 35598072 - 35598143
Alignment:
Q  89 ggaaaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    ||||||||||||||||||| ||| | |||||||||||| |||||||||| ||| ||||||||||||||||||    
T  35598072 ggaaaattaggaaatcatggttagggtttggaggagggaaattaggaaacatgcttaggttttgaaggaggg 35598143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 37892184 - 37892255
Alignment:
Q  13 ctttgaaaatattatgctttaccaatgtttcctaacaaatttgggtaagtgttgtcaacgatagatgcaata 84  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||| | | ||| ||||||||||||    
T  37892184 ctttgaaaatattctgctttaccaatgtgtcctaacaaatttgggtaagtgctttgaacaatagatgcaata 37892255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 49791898 - 49791977
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||| |||||||| ||| | |||||| ||| ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  49791898 aaattagaaaatcatggttagggtttggaagagaggaattaggaaatatcgttaggttttgaaggagggaaaagttgcta 49791977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 39514136 - 39514194
Alignment:
Q  102 atcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  39514136 atcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 39514194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 38211808 - 38211901
Alignment:
Q  143 ttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatattaggtataattagggcaacaatgctttgtttatgaataaaagata 235  Q
    ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||  |||||| |||||| || |  |||||| |||||||||||    
T  38211808 ttaggttttaaaggagggaaaaatggctacaattttttaggttaaatattaggtggaattagtgcaacattgttaggtttataaataaaagata 38211901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 2051787 - 2051843
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  2051787 tttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 2051843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 36871047 - 36871103
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  36871047 tttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 36871103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 229
Target Start/End: Original strand, 49791754 - 49791858
Alignment:
Q  127 gaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaatgctttgtttatg 224  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||| ||| ||  |||| |||||||||| || |||||||||| ||| |||||||||| |    
T  49791754 gaattaggaaatatggttaagttttaaaggagggaaaagttgctaaaatattagggttaaaatattaggttaaaattagggcagcaaagctttgtttagg 49791853  T
Q  225 aataa 229  Q
    |||||    
T  49791854 aataa 49791858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 26210001 - 26209950
Alignment:
Q  135 aaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa 187  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  26210001 aaatatggttaggttttaaaggagggaaaagtggctacaa-ttttaggttaaa 26209950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 26209201 - 26209152
Alignment:
Q  185 aaatattaggtataattagggcaacaatgctttgtttatgaataaaagat 234  Q
    |||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  26209201 aaatattaggtataattagggcgacaatgctttgtttaagaataagagat 26209152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 2052217 - 2052254
Alignment:
Q  134 gaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  2052217 gaaatatggttaggttttgaaggagggaaaagttgcta 2052254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 13926932 - 13926965
Alignment:
Q  9 tctactttgaaaatattatgctttaccaatgttt 42  Q
    ||||||||||||||||| ||||||||||||||||    
T  13926932 tctactttgaaaatattctgctttaccaatgttt 13926965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Original strand, 49791031 - 49791060
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  49791031 tttggaggaggggaattaggaaatatggtt 49791060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Original strand, 49791408 - 49791437
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  49791408 tttggaggaggggaattaggaaatatggtt 49791437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 1e-46; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 3589328 - 3589178
Alignment:
Q  89 ggaaaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaa 187  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| || |||||||||||||    
T  3589328 ggaaaattaggaaatcatggttagggtttggaggaggggaattagaaaatatggttaggttttgaaggagggaaaaatggctataattttttaggttaaa 3589229  T
Q  188 tattaggtataattagggcaacaatgctttgtttatgaataaaagataaga 238  Q
    ||||||||  |||||||||||||||| |  |||||| ||||||||||||||    
T  3589228 tattaggtggaattagggcaacaatgttaggtttataaataaaagataaga 3589178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 95 - 229
Target Start/End: Complemental strand, 2271928 - 2271793
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || | |||||||||| ||||||    
T  2271928 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta-aaatattaggttaaactattag 2271830  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataa 229  Q
    | || |||||||||||||| |||||||||| ||||||    
T  2271829 gttaaaattagggcaacaaagctttgtttaggaataa 2271793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 229
Target Start/End: Complemental strand, 24456505 - 24456370
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattag 193  Q
    ||||||||||||  ||| | ||||||||||| |||||||||||||||||||||||||||||||||||||| | |||| || | ||||||| |||||||||    
T  24456505 ttaggaaatcatagttagggtttggaggaggagaattaggaaatatggttaggttttgaaggagggaaaatttgcta-aaatattaggttaaaatattag 24456407  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataa 229  Q
    | || ||||||||||||||  ||||||||| ||||||    
T  24456406 gttaaaattagggcaacaaaactttgtttaggaataa 24456370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 33049731 - 33049807
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33049731 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 33049807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 29371697 - 29371768
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 166  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29371697 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttagattttgaaggagggaaaagt 29371768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 29374269 - 29374318
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29374269 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 29374318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 222
Target Start/End: Complemental strand, 29921082 - 29920973
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||| |||||| |||| ||| ||  |||| |||||||||| || ||||||||||||||     
T  29921082 tttggaggaggagaattaggaaatatggttaggtttcaaaggaggaaaaagttgctaaaatattagggttaaaatattaggctaaaattagggcaacaaa 29920983  T
Q  213 gctttgttta 222  Q
    ||||||||||    
T  29920982 gctttgttta 29920973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 33007319 - 33007371
Alignment:
Q  119 gaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33007319 gaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 33007371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 25976129 - 25976200
Alignment:
Q  13 ctttgaaaatattatgctttaccaatgtttcctaacaaatttgggtaagtgttgtcaacgatagatgcaata 84  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||| | | ||| ||||||||||||    
T  25976129 ctttgaaaatattctgctttaccaatgtgtcctaacaaatttgggtaagtgctttgaacaatagatgcaata 25976200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 25971689 - 25971760
Alignment:
Q  13 ctttgaaaatattatgctttaccaatgtttcctaacaaatttgggtaagtgttgtcaacgatagatgcaata 84  Q
    ||||||||||||| |||||||||||||| |||||||||||||| ||||||| | | ||| ||||||||||||    
T  25971689 ctttgaaaatattctgctttaccaatgtgtcctaacaaatttgtgtaagtgctttgaacaatagatgcaata 25971760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 2e-45; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 92 - 231
Target Start/End: Complemental strand, 23179566 - 23179426
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  23179566 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatat 23179467  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaa 231  Q
    |||||  |||||||||||||||| |  |||||| |||||||    
T  23179466 taggtggaattagggcaacaatgttaggtttataaataaaa 23179426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 92 - 213
Target Start/End: Complemental strand, 23179375 - 23179253
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  23179375 aaattaggaaatcatggttagggttgggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatat 23179276  T
Q  191 taggtataattagggcaacaatg 213  Q
    |||||  ||||||||||||||||    
T  23179275 taggtggaattagggcaacaatg 23179253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 89 - 237
Target Start/End: Complemental strand, 20844782 - 20844633
Alignment:
Q  89 ggaaaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaa 187  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||||||||| ||||||||||||| ||||||||| || | |||| |||||||||||||    
T  20844782 ggaaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatcgttaggttttgaatgagggaaaaatgaccacaattttttaggttaaa 20844683  T
Q  188 tattaggtataattagggcaacaatgctttgtttatgaataaaagataag 237  Q
    ||||||||  ||||||||||||| || |  |||||| |||||||||||||    
T  20844682 tattaggtggaattagggcaacagtgttaggtttataaataaaagataag 20844633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 92 - 234
Target Start/End: Complemental strand, 20845023 - 20844880
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaat-ttttaggttaaatat 190  Q
    |||||||||||||||  ||| | ||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  20845023 aaattaggaaatcatagttagggtttggaggaagggaattaggaaatattgttaggttttgaaggaggaaaaagtggctacaattttttaggttaaatat 20844924  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaagat 234  Q
    |||||  ||||||||||||| || |  |||||| ||||||||||    
T  20844923 taggtggaattagggcaacagtgttaggtttataaataaaagat 20844880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 92 - 234
Target Start/End: Complemental strand, 20842381 - 20842238
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaat-ttttaggttaaatat 190  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| |||||||||    
T  20842381 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaaatggctacaattttttaagttaaatat 20842282  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaagat 234  Q
    |||||  |||||| ||| || || |  |||||| ||||||||||    
T  20842281 taggtggaattagagcagcagtgttacgtttataaataaaagat 20842238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 95 - 235
Target Start/End: Complemental strand, 12651368 - 12651227
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||    
T  12651368 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgctaaaatatt-aggttaaaatattag 12651270  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataaaagata 235  Q
    | || |||||||||||| | |||||||||| |||||| |||||    
T  12651269 gttaaaattagggcaaccaagctttgtttaggaataagagata 12651227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 95 - 235
Target Start/End: Complemental strand, 39874248 - 39874107
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||    
T  39874248 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgctaaaatatt-aggttaaaatattag 39874150  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataaaagata 235  Q
    | || |||||||||||| | |||||||||| |||||| |||||    
T  39874149 gttaaaattagggcaaccaagctttgtttaggaataagagata 39874107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 20844532 - 20844445
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaattttt 179  Q
    |||||||||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  20844532 aaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggttaggttttgaaggagggaaaaatggctacaattttt 20844445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 10037265 - 10037189
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||| ||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10037265 ttaggaaatgatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 10037189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 115 - 238
Target Start/End: Original strand, 20109908 - 20110034
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt--aaatattagg-tataattagggcaacaa 211  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| || |  ||||||  |||||||||| || ||||||||||||||    
T  20109908 tttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta-aaataataggtttaaaatattaggttaaaattagggcaacaa 20110006  T
Q  212 tgctttgtttatgaataa-aagataaga 238  Q
     |||||||||| |||||| |||||||||    
T  20110007 agctttgtttaggaataagaagataaga 20110034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 23178491 - 23178415
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23178491 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 23178415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 23184420 - 23184344
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23184420 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 23184344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 32672917 - 32672849
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  32672917 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 32672849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 34757414 - 34757338
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34757414 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 34757338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 20842530 - 20842443
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaattttt 179  Q
    ||||||| |||||||| ||| | |||||||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||||||    
T  20842530 aaattagaaaatcatggttagggtttggaggaggggaattatgaaatatggttatgttttgaatgagggaaaaatggctacaattttt 20842443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 20845172 - 20845085
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaattttt 179  Q
    |||||| ||||||||| ||| | |||| |||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  20845172 aaattacgaaatcatggttagggtttgaaggaggagaattaggaaatatagttaggttttgaaggagggaaaagtggccacaattttt 20845085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 32672826 - 32672740
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaattttt 179  Q
    |||||||||||||||  ||| | ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  32672826 aaattaggaaatcatagttagggtttggaggaggagaattaggaaatatggttaggttttgaaggagggaaaa-tggctataattttt 32672740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 23180152 - 23180082
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaag 165  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23180152 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaag 23180082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 3611854 - 3611970
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| |||  |  |||| |||||||||| || |||||||||||| |     
T  3611854 tttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgctaaaataatagggttaaaatattaggttaaaattagggcaaccaa 3611953  T
Q  213 gctttgtttatgaataa 229  Q
    |||||||||| ||||||    
T  3611954 gctttgtttaggaataa 3611970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 20109140 - 20109256
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| |||  |  |||| |||||||||| || ||||||||||||||     
T  20109140 tttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgctaaaataatagggttaaaatattaggttaaaattagggcaacaaa 20109239  T
Q  213 gctttgtttatgaataa 229  Q
    ||| |||||| ||||||    
T  20109240 gctctgtttaagaataa 20109256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 23179657 - 23179589
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||||||||||||| ||| | |||||||||||||||||| |||||||||||||||||||||||||||    
T  23179657 aaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggttaggttttgaaggaggg 23179589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 23178749 - 23178673
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||    
T  23178749 ttaggaaatcatggttagggtttggaggagggaaattaggaaatatagttaggttttgatggagggaaaagttgcta 23178673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 30094377 - 30094493
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||| | |||| |||  |  |||| |||||||||| || |||||||||||| |     
T  30094377 tttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaaattgctaaaataatagggttaaaatattaggttaaaattagggcaaccaa 30094476  T
Q  213 gctttgtttatgaataa 229  Q
    |||||||||| ||||||    
T  30094477 gctttgtttaggaataa 30094493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 32672065 - 32671996
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 164  Q
    ||||||||||||  ||| | |||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  32672065 ttaggaaatcatagttagggtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaa 32671996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 38096160 - 38096231
Alignment:
Q  13 ctttgaaaatattatgctttaccaatgtttcctaacaaatttgggtaagtgttgtcaacgatagatgcaata 84  Q
    ||||||||||||| |||||||||||||| || ||||||||||| ||||||| | | ||| ||||||||||||    
T  38096160 ctttgaaaatattctgctttaccaatgtgtcataacaaatttgagtaagtgctttgaacaatagatgcaata 38096231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Original strand, 3611796 - 3611825
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  3611796 tttggaggaggggaattaggaaatatggtt 3611825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 20844881 - 20844841
Alignment:
Q  139 atggttaggttttgaaggagggaaaagtggctacaattttt 179  Q
    ||||||||||||| |||||||||||| || |||||||||||    
T  20844881 atggttaggttttcaaggagggaaaaatgactacaattttt 20844841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 2e-45; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 92 - 231
Target Start/End: Original strand, 41862222 - 41862362
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  41862222 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatat 41862321  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaa 231  Q
    |||||  |||||||||||||||| |  |||||| |||||||    
T  41862322 taggtggaattagggcaacaatgttaggtttataaataaaa 41862362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 92 - 234
Target Start/End: Original strand, 41946739 - 41946884
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatat--ggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaat 188  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| || ||||||||||||||    
T  41946739 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaat 41946838  T
Q  189 attaggtataattagggcaacaatgctttgtttatgaataaaagat 234  Q
    |||||||  |||||||||||||||| |  |||||| ||||||||||    
T  41946839 attaggtggaattagggcaacaatgttaggtttataaataaaagat 41946884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 92 - 231
Target Start/End: Complemental strand, 22673868 - 22673728
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  22673868 aaattaggaaattatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatat 22673769  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaa 231  Q
    ||| |  |||||||||||||||| |  |||||| |||||||    
T  22673768 tagttggaattagggcaacaatgttaggtttataaataaaa 22673728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 92 - 231
Target Start/End: Complemental strand, 52680294 - 52680154
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||    
T  52680294 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctataattttttaggttaaatat 52680195  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaa 231  Q
    ||| |  |||||||||||||||| |  |||||| |||||||    
T  52680194 tagttggaattagggcaacaatgttaggtttataaataaaa 52680154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 95 - 229
Target Start/End: Complemental strand, 35756499 - 35756364
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||    
T  35756499 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgctaaaatatt-aggttaaaatattag 35756401  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataa 229  Q
    | || |||||||||||||| |||||||||| ||||||    
T  35756400 gttaaaattagggcaacaaagctttgtttaggaataa 35756364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 95 - 238
Target Start/End: Complemental strand, 28380334 - 28380189
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||| || |||||||| ||||||    
T  28380334 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggggggaaaagttgctaaaatatt-aggttaaaatattag 28380236  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataa-aagataaga 238  Q
    | || |||||||||||||| |||||||||| |||||| |||||||||    
T  28380235 gttaaaattagggcaacaaagctttgtttaggaataagaagataaga 28380189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 95 - 222
Target Start/End: Original strand, 30390829 - 30390957
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaatattagg 194  Q
    ||||||||||||  ||| | ||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||| || || | ||||||||||    
T  30390829 ttaggaaatcatagttagggtttggaggaggtgaattagggaatatggttaggttttgaaggagggaaaagttgctaaaatattaagttaaaatattagg 30390928  T
Q  195 -tataattagggcaacaatgctttgttta 222  Q
     || |||||||||||||| ||||||||||    
T  30390929 ttaaaattagggcaacaaagctttgttta 30390957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 92 - 194
Target Start/End: Original strand, 41862413 - 41862516
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | ||||||||||||||| ||| |||||||||||||||||||| ||||| |||||||||| || ||||||||||||||||    
T  41862413 aaattaggaaatcatggttagggtttggaggaggggaaatagaaaatatggttaggttttgaaagagggtaaagtggctataattttttaggttaaatat 41862512  T
Q  191 tagg 194  Q
    ||||    
T  41862513 tagg 41862516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 95 - 241
Target Start/End: Complemental strand, 42345193 - 42345058
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaatattagg 194  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || | |||||||||            
T  42345193 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta-aaatattaggttaa-------- 42345103  T
Q  195 tataattagggcaacaatgctttgtttatgaat-aaaagataagagat 241  Q
       |||||||||||||| |||||||||| |||| ||||||||||||||    
T  42345102 ---aattagggcaacaaagctttgtttaggaataaaaagataagagat 42345058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 16905912 - 16905836
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16905912 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 16905836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 29363856 - 29363932
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29363856 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 29363932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 42345314 - 42345238
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42345314 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 42345238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 53285722 - 53285650
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 164  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53285722 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 53285650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 21380396 - 21380325
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 166  Q
    ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21380396 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 21380325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 238
Target Start/End: Original strand, 14148580 - 14148706
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| ||| ||  |||| |||||||||| || ||||||| ||||||     
T  14148580 tttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgctaaaatattagggttaaaatattaggttaaaattaggtcaacaaa 14148679  T
Q  213 gctttgtttatgaataa-aagataaga 238  Q
    |||||||||| |||||| |||||||||    
T  14148680 gctttgtttaggaataagaagataaga 14148706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 29359850 - 29359923
Alignment:
Q  11 tactttgaaaatattatgctttaccaatgtttcctaacaaatttgggtaagtgttgtcaacgatagatgcaata 84  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  29359850 tactttgaaaatattctactttaccaatgtttcctaacaaatttgggtaagtgctatcaacgatagatgcaata 29359923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 22673961 - 22673893
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  22673961 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 22673893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 25819739 - 25819623
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||||||||||| |||| ||| ||  |||| |||||||||| || ||||||||||||||     
T  25819739 tttggaggaggagaattaggaaatatggttatgttttaaaggagggaaaagttgctaaaatattagggttaaaatattaggttaaaattagggcaacaaa 25819640  T
Q  213 gctttgtttatgaataa 229  Q
    |||||||||| ||||||    
T  25819639 gctttgtttaggaataa 25819623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 29363528 - 29363604
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  29363528 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttagattttgaaggagggaaaagttgcta 29363604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 29363735 - 29363811
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  29363735 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggatggaaaagttgcta 29363811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 41861949 - 41862017
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  41861949 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 41862017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 41862040 - 41862108
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  41862040 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 41862108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 41862131 - 41862199
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  41862131 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 41862199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 36896297 - 36896372
Alignment:
Q  9 tctactttgaaaatattatgctttaccaatgtttcctaacaaatttgggtaagtgttgtcaacgatagatgcaata 84  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||||||||||||    
T  36896297 tctattttgaaaatattatgctttaccaatgtttcataacaaatttgggtaagtgctttcaacaatagatgcaata 36896372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 19518516 - 19518632
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||||||| |||| ||| ||  ||||||| ||||||| || |||||||||||| |     
T  19518516 tttggaggaggagaattaggaaatatggttaggttttaaatgagggaaaagttgctaaaatattagggttaaattattaggttaaaattagggcaaccaa 19518615  T
Q  213 gctttgtttatgaataa 229  Q
    |||||||||| ||||||    
T  19518616 gctttgtttaggaataa 19518632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 21585332 - 21585448
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||||||| |||| ||| ||  ||||||| ||||||| || |||||||||||| |     
T  21585332 tttggaggaggagaattaggaaatatggttaggttttaaatgagggaaaagttgctaaaatattagggttaaattattaggttaaaattagggcaaccaa 21585431  T
Q  213 gctttgtttatgaataa 229  Q
    |||||||||| ||||||    
T  21585432 gctttgtttaggaataa 21585448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 41946648 - 41946716
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||||||||||||| ||| | |||||||||||||||||| |||||||||||||||||||||||||||    
T  41946648 aaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggttaggttttgaaggaggg 41946716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 52679817 - 52679741
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||    
T  52679817 ttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgaaggagagaaaagttgcta 52679741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 52680385 - 52680317
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| ||||||||    
T  52680385 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttaaaggaggg 52680317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 53285839 - 53285763
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||    
T  53285839 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttagattttgaaggaggaaaaagttgcta 53285763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 41946554 - 41946625
Alignment:
Q  89 ggaaaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    ||||||||| ||||||||| ||| | |||||||||||||||||||||||||| |||||||||||||||||||    
T  41946554 ggaaaattaagaaatcatggttagggtttggaggaggggaattaggaaatatagttaggttttgaaggaggg 41946625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 41863165 - 41863241
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||    
T  41863165 ttaggaaatcatggttagggtttggaggagggaaattaggaaatatagttaggttttgatggagggaaaagttgcta 41863241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 22673370 - 22673294
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||||||| |||  |||||| ||||    
T  22673370 ttaggaaatcatggttaaggtttggaggagggaaattaggaaatatggttaggttttgaaagagataaaagttgcta 22673294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 14148434 - 14148490
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||| ||||||||||||||||||||||||| |||||| ||||||| ||||    
T  14148434 tttggaggaggagaattaggaaatatggttaggttttaaaggagagaaaagttgcta 14148490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 229
Target Start/End: Original strand, 9334004 - 9334101
Alignment:
Q  134 gaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattagg-tataattagggcaacaatgctttgtttatgaataa 229  Q
    |||||||||||||||||| || ||||||||||| |||| ||| ||  ||||||| ||||||| || |||||||||||| | |||||||||| ||||||    
T  9334004 gaaatatggttaggttttaaatgagggaaaagttgctaaaatattagggttaaattattaggttaaaattagggcaaccaagctttgtttaggaataa 9334101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 41946495 - 41946546
Alignment:
Q  89 ggaaaattaggaaatcatgattatgatttggaggaggggaattaggaaatat 140  Q
    ||||||||| ||||||||| ||| | ||||||||||||||||||||||||||    
T  41946495 ggaaaattaagaaatcatggttagggtttggaggaggggaattaggaaatat 41946546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 22673726 - 22673689
Alignment:
Q  134 gaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  22673726 gaaatatggttaggttttgaaggagggaaaagttgcta 22673689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 29363649 - 29363690
Alignment:
Q  130 ttaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  29363649 ttaggaaatatggttagattttgaaggagggaaaagttgcta 29363690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 164
Target Start/End: Complemental strand, 52680152 - 52680122
Alignment:
Q  134 gaaatatggttaggttttgaaggagggaaaa 164  Q
    |||||||||||||||||||||||||||||||    
T  52680152 gaaatatggttaggttttgaaggagggaaaa 52680122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Original strand, 14148522 - 14148551
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  14148522 tttggaggaggggaattaggaaatatggtt 14148551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Original strand, 19518458 - 19518487
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  19518458 tttggaggaggggaattaggaaatatggtt 19518487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Original strand, 21585274 - 21585303
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  21585274 tttggaggaggggaattaggaaatatggtt 21585303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Complemental strand, 25819797 - 25819768
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  25819797 tttggaggaggggaattaggaaatatggtt 25819768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 92; Significance: 9e-45; HSPs: 3)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 92 - 234
Target Start/End: Complemental strand, 36158 - 36015
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaat-ttttaggttaaatat 190  Q
    |||||||||||||||| ||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36158 aaattaggaaatcatggttagggtttggaggatgggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaattttttaggttaaatat 36059  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaagat 234  Q
    |||||  ||||||||||||| || |  |||||| ||||||||||    
T  36058 taggtggaattagggcaacagtgttaggtttataaataaaagat 36015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 36306 - 36220
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaattttt 179  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  36306 aaattaggaaatcatggttagg-tttggaggaggggaattaggaaatatggttaggttttaaaggagggaaaagtgggtacaattttt 36220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 36445 - 36368
Alignment:
Q  102 atcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaattttt 179  Q
    |||||| ||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36445 atcatggttagggtttggaggaggggaattaggatatatggttaggttttgaaggagggaaaagtggctacaattttt 36368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 4e-44; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 92 - 241
Target Start/End: Complemental strand, 29954329 - 29954180
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tat 190  Q
    ||||||||| |||||| ||| | |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  29954329 aaattaggagatcatggttagggtttggaggaggggagttatgaaatatggttaggttttgaaggagggaaaagtggctacaatttt-aggttaaaatat 29954231  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaagataagagat 241  Q
    |||||||||||||| | ||||||||||||||| |||||| |||||| ||||    
T  29954230 taggtataattaggacgacaatgctttgtttaagaataagagataaaagat 29954180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 92 - 231
Target Start/End: Complemental strand, 22004540 - 22004400
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  22004540 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttgggttaaatat 22004441  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaa 231  Q
    |||||  |||||||||||||||| |  |||||| |||||||    
T  22004440 taggtggaattagggcaacaatgttaggtttataaataaaa 22004400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 92 - 235
Target Start/End: Complemental strand, 13927199 - 13927056
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | |||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  13927199 aaattaggaaatcatggttaaggtttggaggagggaaattaggaaatatagttaggttttgaaggaggg-aaagtggctacaattttttaggttaaatat 13927101  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaagata 235  Q
    |||||  |||||||||||||||| |  |||||| |||||||||||    
T  13927100 taggtgaaattagggcaacaatgttaggtttataaataaaagata 13927056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 92 - 231
Target Start/End: Complemental strand, 22004349 - 22004209
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  22004349 aaattaggaaatcatggttagggtttggaggagggtaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatat 22004250  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaa 231  Q
    | |||  |||||||||||||||| |  |||||| |||||||    
T  22004249 tcggtggaattagggcaacaatgttaggtttataaataaaa 22004209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 92 - 231
Target Start/End: Complemental strand, 7891317 - 7891177
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||| ||||| | |||| || ||||||||||||||||    
T  7891317 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaaatagctataattttttaggttaaatat 7891218  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaa 231  Q
    ||| |  |||||||||||||||| |  |||||| |||||||    
T  7891217 tagttggaattagggcaacaatgttaggtttataaataaaa 7891177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 95 - 229
Target Start/End: Original strand, 20959400 - 20959535
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || | |||||||||| ||||||    
T  20959400 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta-aaatattaggttaaactattag 20959498  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataa 229  Q
    | || |||||||||||||| |||||||||| ||||||    
T  20959499 gttaaaattagggcaacaaagctttgtttaggaataa 20959535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 95 - 238
Target Start/End: Complemental strand, 32656766 - 32656621
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaatattagg 194  Q
    ||||||||||||| ||| | ||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||| || || | ||||||||||    
T  32656766 ttaggaaatcatggttagggtttggaggaggtgaattagggaatatggttaggttttgaaggagggaaaagttgctaaaatattaagttaaaatattagg 32656667  T
Q  195 -tataattagggcaacaatgctttgtttatgaataa-aagataaga 238  Q
     || |||||||||||||| |||||||||| |||||| |||||||||    
T  32656666 ttaaaattagggcaacaaagctttgtttaggaataagaagataaga 32656621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 237
Target Start/End: Complemental strand, 7885015 - 7884872
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||    
T  7885015 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgctaaaatatt-aggttaaaatattag 7884917  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataaaagataag 237  Q
    | || |||||||||||| | |||||||||| |||||| |||||||    
T  7884916 gttaaaattagggcaaccaagctttgtttaggaataagagataag 7884872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 3600051 - 3600132
Alignment:
Q  113 gatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaatattaggt 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  3600051 gatttggaggaggggaattaggaaatatggttaggttttgaaggaaggaaaagtggctacaa-ttttaggttaaatattaggt 3600132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 95 - 229
Target Start/End: Complemental strand, 45112789 - 45112654
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattag 193  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || | ||||||| ||||| |||    
T  45112789 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta-aaatattaggttaaaataatag 45112691  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataa 229  Q
    | || |||||||||||||| ||||| |||| ||||||    
T  45112690 gttaaaattagggcaacaaagctttatttaggaataa 45112654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 26161981 - 26161860
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || | |||| || |||||||||| || ||||||||||||||     
T  26161981 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta-aaatattagtttaaaatattaggttaaaattagggcaacaaa 26161883  T
Q  213 gctttgtttatgaataaaagata 235  Q
    |||||||||| |||||| |||||    
T  26161882 gctttgtttaggaataagagata 26161860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 92 - 234
Target Start/End: Original strand, 3061595 - 3061725
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaatatt 191  Q
    ||||||||| |||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||            |||||||    
T  3061595 aaattaggagatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggaaaaagtggctac------------aaatatt 3061682  T
Q  192 aggtataattagggcaacaatgctttgtttatgaataaaagat 234  Q
    ||||||||||||||| ||| ||||||||||| |||||| ||||    
T  3061683 aggtataattagggcgacagtgctttgtttaagaataagagat 3061725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 5090993 - 5090921
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 164  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5090993 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 5090921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 13400704 - 13400780
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13400704 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 13400780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 13927466 - 13927381
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaattttt 179  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||    
T  13927466 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaag--gggaaaagtggcaacaattttt 13927381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 27712755 - 27712639
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| ||| ||  |||| |||||||||| || ||||||||||||||     
T  27712755 tttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgctaaaatattagggttaaaatattaggttaaaattagggcaacaaa 27712656  T
Q  213 gctttgtttatgaataa 229  Q
    |||||||||| ||||||    
T  27712655 gctttgtttaggaataa 27712639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 3600159 - 3600233
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 166  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3600159 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatcgttaggttttgaaggagggaaaagt 3600233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 5091110 - 5091034
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  5091110 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggaaaaagttgcta 5091034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 7890819 - 7890743
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  7890819 ttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgaaggagggaaaagttgcta 7890743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 22004631 - 22004563
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  22004631 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 22004563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 7889201 - 7889271
Alignment:
Q  96 taggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 166  Q
    |||||||||||| ||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7889201 taggaaatcatggttagggtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaagt 7889271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 7891408 - 7891340
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| ||||||||    
T  7891408 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttaaaggaggg 7891340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 22003587 - 22003511
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||    
T  22003587 ttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaagttgcta 22003511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 31098036 - 31097942
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa 187  Q
    ||||||||| |||||  ||| | |||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  31098036 aaattaggagatcatagttagggtttggaggaggggagttaagaaatatggttaggttttgaaggaggaaaaaatggctacaa-ttttaggttaaa 31097942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 26168305 - 26168243
Alignment:
Q  20 aatattatgctttaccaatgtttcctaacaaatttgggtaagtgttgtcaacgatagatgcaa 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  26168305 aatattttgctttaccaatgtttcctaacaaatttgggtaagtgctatcaacgatagatgcaa 26168243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 32656866 - 32656790
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | ||||||||||| |||||||| ||||||||||||||||||| ||||||||||| ||||    
T  32656866 ttaggaaatcatggttagggtttggaggaggtgaattagggaatatggttaggttttgaatgagggaaaagttgcta 32656790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 32035290 - 32035234
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  32035290 tttggaggaggggaattagagaatatggttaggttttgaaggagggaaaagttgcta 32035234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 16719089 - 16719033
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||    
T  16719089 tttggaggaggagaattaggaaatatggttaggttttaaatgagggaaaagttgcta 16719033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 17693299 - 17693243
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||    
T  17693299 tttggaggaggagaattaggaaatatggttaggttttaaatgagggaaaagttgcta 17693243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 7891175 - 7891138
Alignment:
Q  134 gaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  7891175 gaaatatggttaggttttgaaggagggaaaagttgcta 7891138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 13927319 - 13927271
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatat 140  Q
    |||||||||||||||| ||| | |||||||||||| |||||||||||||    
T  13927319 aaattaggaaatcatggttaaggtttggaggagggaaattaggaaatat 13927271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 31095164 - 31095117
Alignment:
Q  187 atattaggtataattagggcaacaatgctttgtttatgaataaaagat 234  Q
    |||||||||||||||||||| ||| ||||||||||| |||||| ||||    
T  31095164 atattaggtataattagggcgacagtgctttgtttaagaataagagat 31095117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Complemental strand, 16719147 - 16719118
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  16719147 tttggaggaggggaattaggaaatatggtt 16719118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Complemental strand, 17693357 - 17693328
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  17693357 tttggaggaggggaattaggaaatatggtt 17693328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Complemental strand, 27712813 - 27712784
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  27712813 tttggaggaggggaattaggaaatatggtt 27712784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 92 - 210
Target Start/End: Original strand, 35433149 - 35433268
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35433149 aaattaggaaatcatggttagggtttggaggaggggaattaagaaatatggttaggttttgaaggagggaaaagtggctacaactttttaggttaaatat 35433248  T
Q  191 taggtataattagggcaaca 210  Q
    |||||  |||||||||||||    
T  35433249 taggtggaattagggcaaca 35433268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 92 - 213
Target Start/End: Complemental strand, 13905832 - 13905710
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  13905832 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttgggttaaatat 13905733  T
Q  191 taggtataattagggcaacaatg 213  Q
    |||||  ||||||||||||||||    
T  13905732 taggtggaattagggcaacaatg 13905710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 92 - 231
Target Start/End: Complemental strand, 13899934 - 13899794
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  13899934 aaattaggaaatcatggttagggtttggaggagggtaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatat 13899835  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaa 231  Q
    | |||  |||||||||||||||| |  |||||| |||||||    
T  13899834 tcggtggaattagggcaacaatgttaggtttataaataaaa 13899794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 92 - 231
Target Start/End: Complemental strand, 26453469 - 26453329
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||    
T  26453469 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctataattttttaggttaaatat 26453370  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaa 231  Q
    ||| |  |||||||||||||||| |  |||||| |||||||    
T  26453369 tagttggaattagggcaacaatgttaggtttataaataaaa 26453329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 92 - 231
Target Start/End: Complemental strand, 40603305 - 40603165
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||    
T  40603305 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctataattttttaggttaaatat 40603206  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaa 231  Q
    ||| |  |||||||||||||||| |  |||||| |||||||    
T  40603205 tagttggaattagggcaacaatgttaggtttataaataaaa 40603165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 27999664 - 27999782
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||||||| | |||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  27999664 aaattaggaaatcatgattagggtttggaggaggggaatcatgaaatatggttaggttatgaaggagggaaaagtggctacaattttttaggttaaatat 27999763  T
Q  191 taggtataattagggcaac 209  Q
    |||||  ||||||||||||    
T  27999764 taggtggaattagggcaac 27999782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 28090398 - 28090516
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||||||| | |||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  28090398 aaattaggaaatcatgattagggtttggaggaggggaatcatgaaatatggttaggttatgaaggagggaaaagtggctacaattttttaggttaaatat 28090497  T
Q  191 taggtataattagggcaac 209  Q
    |||||  ||||||||||||    
T  28090498 taggtggaattagggcaac 28090516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 28096721 - 28096839
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||||||| | |||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  28096721 aaattaggaaatcatgattagggtttggaggaggggaatcatgaaatatggttaggttatgaaggagggaaaagtggctacaattttttaggttaaatat 28096820  T
Q  191 taggtataattagggcaac 209  Q
    |||||  ||||||||||||    
T  28096821 taggtggaattagggcaac 28096839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 92 - 234
Target Start/End: Original strand, 1925653 - 1925796
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||| ||| ||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  1925653 aaattaggaaataatggttagggtttggaggaggggaattatgaaatatggttaggttttgaaggagggaaaagtatctacaattttttaggttaaatat 1925752  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaagat 234  Q
    |||||  ||||||||||||| || |  |||||| ||||||||||    
T  1925753 taggtggaattagggcaacagtgttaggtttataaataaaagat 1925796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 95 - 241
Target Start/End: Complemental strand, 180282 - 180135
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||    
T  180282 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgctaaaatatt-aggttaaaatattag 180184  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataaaagataagagat 241  Q
    | || |||||||||||| | |||||||||| |||||| |||||||||||    
T  180183 gttaaaattagggcaaccaagctttgtttaggaataagagataagagat 180135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 95 - 229
Target Start/End: Complemental strand, 204436 - 204301
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaatattagg 194  Q
    ||||||||||||| ||| | ||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||| || || | ||||||||||    
T  204436 ttaggaaatcatggttagggtttggaggaggtgaattagggaatatggttaggttttgaaggagggaaaagttgctaaaatattaagttaaaatattagg 204337  T
Q  195 -tataattagggcaacaatgctttgtttatgaataa 229  Q
     || |||||||||||||| |||||||||| ||||||    
T  204336 ttaaaattagggcaacaaagctttgtttaggaataa 204301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 1501846 - 1501725
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattagg-tataattagggcaacaat 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||| || ||||||||||||||     
T  1501846 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgctaaaatatt-aggttaaaatattaggttaaaattagggcaacaaa 1501748  T
Q  213 gctttgtttatgaataaaagata 235  Q
    |||||||||| |||||| |||||    
T  1501747 gctttgtttaggaataagagata 1501725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 980034 - 980174
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||    
T  980034 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgctaaaatatt-aggttaaaatattag 980132  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataaaagat 234  Q
    | || |||||||||||| | |||||||||| |||||| ||||    
T  980133 gttaaaattagggcaaccaagctttgtttaggaataagagat 980174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 234
Target Start/End: Complemental strand, 2444195 - 2444055
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||    
T  2444195 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgctaaaatatt-aggttaaaatattag 2444097  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataaaagat 234  Q
    | || |||||||||||| | |||||||||| |||||| ||||    
T  2444096 gttaaaattagggcaaccaagctttgtttaggaataagagat 2444055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 95 - 229
Target Start/End: Complemental strand, 13899172 - 13899037
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | |||||||||||| |||||||||||||||||||||||||| |||||||||||| |||| ||| || |||||||| ||||||    
T  13899172 ttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaagttgctaaaatatt-aggttaaaatattag 13899074  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataa 229  Q
    | || |||||||| ||||| |||||||||| ||||||    
T  13899073 gttaaaattagggtaacaaagctttgtttaggaataa 13899037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 32287490 - 32287396
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa 187  Q
    ||||||||| |||||| ||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  32287490 aaattaggagatcatggttagggtttggaggaggggaattaggaaatatgattaggttttgaaggagggaaaagtggttacaa-ttttaggttaaa 32287396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 178
Target Start/End: Complemental strand, 32287351 - 32287265
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttt 178  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||    
T  32287351 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatagttaggttttgaaggagggaaaaggggttacaatttt 32287265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 35433023 - 35433092
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaat-ttttaggt 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35433023 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatattttaggt 35433092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 229
Target Start/End: Complemental strand, 14039789 - 14039654
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||  ||| | |||||||||||| |||||||||||||||||||||||||| |||||||||||| |||| ||| || |||||||| ||||||    
T  14039789 ttaggaaatcattgttagggtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaagttgctaaaatatt-aggttaaaatattag 14039691  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataa 229  Q
    | || |||||||| ||||| |||||||||| ||||||    
T  14039690 gttaaaattagggtaacaaagctttgtttaggaataa 14039654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 19640982 - 19640906
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19640982 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 19640906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 19839575 - 19839499
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19839575 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 19839499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 25643793 - 25643677
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| ||| ||  |||| |||||||||| || ||||||||||||||     
T  25643793 tttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgctaaaatattagggttaaaatattaggttaaaattagggcaacaaa 25643694  T
Q  213 gctttgtttatgaataa 229  Q
    |||||||||| ||||||    
T  25643693 gctttgtttaggaataa 25643677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 4998137 - 4998212
Alignment:
Q  9 tctactttgaaaatattatgctttaccaatgtttcctaacaaatttgggtaagtgttgtcaacgatagatgcaata 84  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||    
T  4998137 tctactttgaaaatattctgctttaccaatgtttcctaacaaatttgggtaagtgctatcaacgatatatgcaata 4998212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 5014213 - 5014288
Alignment:
Q  9 tctactttgaaaatattatgctttaccaatgtttcctaacaaatttgggtaagtgttgtcaacgatagatgcaata 84  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||    
T  5014213 tctactttgaaaatattctgctttaccaatgtttcctaacaaatttgggtaagtgctatcaacgatatatgcaata 5014288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 1925514 - 1925591
Alignment:
Q  102 atcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaattttt 179  Q
    |||||| ||| | ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1925514 atcatggttagggtttggagaaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctacaattttt 1925591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 980487 - 980563
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  980487 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 980563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 5001131 - 5001207
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  5001131 ttaggaaatcatggttagggtttggaggaggggaattaggaaataaggttaggttttgaaggagggaaaagttgcta 5001207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 5012801 - 5012877
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  5012801 ttaggaaatcatggttagggtttggaggaggggaattaggaaataaggttaggttttgaaggagggaaaagttgcta 5012877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 26452971 - 26452895
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  26452971 ttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgaaggagggaaaagttgcta 26452895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 36440114 - 36440190
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  36440114 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatagttaggttttgaaggagggaaaagttgcta 36440190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 40603395 - 40603325
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaa 162  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40603395 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttaaaggagggaa 40603325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 1512227 - 1512154
Alignment:
Q  9 tctactttgaaaatattatgctttaccaatgtttcctaacaaatttgggtaagtgttgtcaacgatagatgcaa 82  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||| | ||||||||||||||||    
T  1512227 tctactttgaaaatattttactttaccgatgtttcctaacaaatttgggtaagtgctatcaacgatagatgcaa 1512154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 2297032 - 2296907
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| ||| ||  |||| |||||||||| || | |||| |||||||     
T  2297032 tttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgctaaaatattagggttaaaatattaggttaaagttagagcaacaaa 2296933  T
Q  213 gctttgtttatgaataa-aagataag 237  Q
    |||||||||| |||||| ||||||||    
T  2296932 gctttgtttaggaataagaagataag 2296907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 13905923 - 13905855
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  13905923 aaattaggaaatgatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 13905855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 19641144 - 19641068
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    |||||||||||||  || | |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  19641144 ttaggaaatcatggctagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagttgcta 19641068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 19839737 - 19839661
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    |||||||||||||  || | |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  19839737 ttaggaaatcatggctagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagttgcta 19839661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 26453560 - 26453492
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| ||||||||    
T  26453560 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttaaaggaggg 26453492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 42111679 - 42111750
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 166  Q
    ||||||||| ||| ||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42111679 ttaggaaatgatggttagggtttggaggaggggaattagaaaatatggttaggttttgaaggagggaaaagt 42111750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 13900105 - 13899992
Alignment:
Q  118 ggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaatgct 215  Q
    |||||||| ||||||||||||||||||||||||| ||||| |||||||| |||| |||  |  |||| |||||||||| || |||||||||||||| |||    
T  13900105 ggaggaggagaattaggaaatatggttaggttttaaaggatggaaaagttgctaaaataatagggttaaaatattaggttaaaattagggcaacaaagct 13900006  T
Q  216 ttgtttatgaataa 229  Q
    ||||||| ||||||    
T  13900005 ttgtttaggaataa 13899992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 21591195 - 21591271
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||| ||||||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  21591195 ttaggaaatcatggttaggctttgaaggaggggaattagagaatatggttaggttttgaaggagggaaaagttgcta 21591271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 40602807 - 40602731
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||| |||||| |||||||||||| ||||||||||||||||||| ||||    
T  40602807 ttaggaaatcatggttagggtttggaggagggaaattagaaaatatggttagattttgaaggagggaaaagttgcta 40602731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 1272014 - 1271944
Alignment:
Q  161 aaaagtggctacaattttt-aggttaaatattaggtataattagggcaacaatgctttgtttatgaataaa 230  Q
    ||||||||||||||||||| ||||||||||||||||  ||||||||||||| ||||||||||| |||||||    
T  1272014 aaaagtggctacaattttttaggttaaatattaggtggaattagggcaacagtgctttgtttaagaataaa 1271944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 178
Target Start/End: Complemental strand, 32287087 - 32287001
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttt 178  Q
    ||||||| |||||||| ||| | |||||||||| ||||| ||||||| | |||||||||| |||||||||||||||  |||||||||    
T  32287087 aaattagaaaatcatggttagggtttggaggagaggaatcaggaaatgtagttaggttttaaaggagggaaaagtgattacaatttt 32287001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 6120893 - 6120837
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||| ||||||| ||||||||||||||||| |||||||||||||| ||||    
T  6120893 tttggaggaggagaattagaaaatatggttaggttttaaaggagggaaaagttgcta 6120837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 35433287 - 35433353
Alignment:
Q  145 aggttttgaaggagggaaaagtggctacaa-tttttaggttaaatattaggtataattagggcaaca 210  Q
    |||||||||||||| ||||||||||||||| ||||||  |||||||||||||  |||||||||||||    
T  35433287 aggttttgaaggagagaaaagtggctacaactttttaaattaaatattaggtggaattagggcaaca 35433353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 980282 - 980331
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||| ||| | ||| ||||||||||||||||||||||||||    
T  980282 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggtt 980331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 26453327 - 26453290
Alignment:
Q  134 gaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  26453327 gaaatatggttaggttttgaaggagggaaaagttgcta 26453290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 40603163 - 40603126
Alignment:
Q  134 gaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  40603163 gaaatatggttaggttttgaaggagggaaaagttgcta 40603126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 32287191 - 32287143
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatat 140  Q
    |||||||||||||||| ||| | ||||||||||||||||||| ||||||    
T  32287191 aaattaggaaatcatggttaaggtttggaggaggggaattagaaaatat 32287143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 27999854 - 27999904
Alignment:
Q  160 gaaaagtggctacaatttt-taggttaaatattaggtataattagggcaac 209  Q
    ||||||||| ||||||||| |||||||||||||||||  ||||||||||||    
T  27999854 gaaaagtggttacaattttttaggttaaatattaggtggaattagggcaac 27999904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 28090588 - 28090638
Alignment:
Q  160 gaaaagtggctacaatttt-taggttaaatattaggtataattagggcaac 209  Q
    ||||||||| ||||||||| |||||||||||||||||  ||||||||||||    
T  28090588 gaaaagtggttacaattttttaggttaaatattaggtggaattagggcaac 28090638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 28096911 - 28096961
Alignment:
Q  160 gaaaagtggctacaatttt-taggttaaatattaggtataattagggcaac 209  Q
    ||||||||| ||||||||| |||||||||||||||||  ||||||||||||    
T  28096911 gaaaagtggttacaattttttaggttaaatattaggtggaattagggcaac 28096961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Complemental strand, 2297090 - 2297061
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  2297090 tttggaggaggggaattaggaaatatggtt 2297061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Complemental strand, 6120951 - 6120922
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  6120951 tttggaggaggggaattaggaaatatggtt 6120922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Complemental strand, 25643851 - 25643822
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  25643851 tttggaggaggggaattaggaaatatggtt 25643822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 13899791 - 13899759
Alignment:
Q  139 atggttaggttttgaaggagggaaaagtggcta 171  Q
    |||||||||||||||||||||||||||| ||||    
T  13899791 atggttaggttttgaaggagggaaaagttgcta 13899759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 81; Significance: 3e-38; HSPs: 5)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 92 - 231
Target Start/End: Complemental strand, 41266 - 41126
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaa-tttttaggttaaatat 190  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  41266 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataatttttttggttaaatat 41167  T
Q  191 taggtataattagggcaacaatgctttgtttatgaataaaa 231  Q
    | | |  |||||||||||||||| |  |||||| |||||||    
T  41166 ttgttggaattagggcaacaatgttaggtttataaataaaa 41126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 40901 - 40825
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||    
T  40901 ttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaagttgcta 40825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 41357 - 41289
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||||||||||||| ||| | |||||||||||||||||| |||||||||||||||||||||||||||    
T  41357 aaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggttaggttttgaaggaggg 41289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 41448 - 41380
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggaggg 160  Q
    |||||||||||||||| ||| | ||||||||||||||||||| ||||||||||||||||||||||||||    
T  41448 aaattaggaaatcatggttagggtttggaggaggggaattagaaaatatggttaggttttgaaggaggg 41380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 41118 - 41086
Alignment:
Q  139 atggttaggttttgaaggagggaaaagtggcta 171  Q
    |||||||||||||||||||||||||||| ||||    
T  41118 atggttaggttttgaaggagggaaaagttgcta 41086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 229
Target Start/End: Complemental strand, 19958145 - 19958010
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||    
T  19958145 ttaggaaatcatggttagagtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgctaaaatatt-aggttaaaatattag 19958047  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataa 229  Q
    | || |||||||||||||| |||||||||| ||||||    
T  19958046 gttaaaattagggcaacaaagctttgtttaggaataa 19958010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 95 - 238
Target Start/End: Complemental strand, 21637138 - 21636993
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatatt-a 192  Q
    ||||||||||||| ||| | |||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| || | ||||||| ||||||| |    
T  21637138 ttaggaaatcatggttagggtttggaggagaggaattagggaatatggttaggttttgaaggagggaaaagttgcta-aaatattaggttaaaatattaa 21637040  T
Q  193 ggtataattagggcaacaatgctttgtttatgaataa-aagataaga 238  Q
    | || |||||||||||||| |||||||||| |||||| |||||||||    
T  21637039 gttaaaattagggcaacaaagctttgtttaggaataagaagataaga 21636993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 410108 - 410224
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||| ||||||||| |||||||||||||| |||| ||| ||  |||| |||||||||| || ||||||||||||||     
T  410108 tttggaggaggagaattaggaaatatgcttaggttttaaaggagggaaaagttgctaaaatattagggttaaaatattaggttaaaattagggcaacaaa 410207  T
Q  213 gctttgtttatgaataa 229  Q
    |||||||||| ||||||    
T  410208 gctttgtttaggaataa 410224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 18489801 - 18489872
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa 187  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||    
T  18489801 tttggaggaggggaattaggaaatatggttatgttttgaaggagggaaaagtgactacaa-ttttaggttaaa 18489872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 18490007 - 18489931
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  18490007 ttaggaaatcatggttagggtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaagttgcta 18489931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 22732217 - 22732289
Alignment:
Q  92 aaattaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 164  Q
    |||||||||||||||| ||| | |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22732217 aaattaggaaatcatggttagggtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaa 22732289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 24014126 - 24014202
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||| ||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24014126 ttaggaaatgatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 24014202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 37985456 - 37985532
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  37985456 ttaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagttgcta 37985532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 18278561 - 18278617
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18278561 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 18278617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 24011222 - 24011291
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 164  Q
    ||||||||||||| ||| | ||||||||||| |||||| ||||||||||||| |||||||||||||||||    
T  24011222 ttaggaaatcatggttagggtttggaggaggagaattatgaaatatggttagattttgaaggagggaaaa 24011291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 37985586 - 37985634
Alignment:
Q  123 aggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  37985586 aggggaattaggaaatattgttaggttttgaaggagggaaaagttgcta 37985634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 41377822 - 41377874
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttagg 147  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||    
T  41377822 ttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttagg 41377874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Original strand, 410050 - 410079
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  410050 tttggaggaggggaattaggaaatatggtt 410079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 18492665 - 18492710
Alignment:
Q  190 ttaggtataattagggcaacaatgctttgtttatgaataaaagata 235  Q
    ||||||||||||||||| | ||||||||||||| |||||| |||||    
T  18492665 ttaggtataattagggcgataatgctttgtttaagaataagagata 18492710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 24011299 - 24011343
Alignment:
Q  185 aaatattaggtataattagggcaacaatgctttgtttatgaataa 229  Q
    |||||||||||  |||||||||||||| |||||||||| ||||||    
T  24011299 aaatattaggttaaattagggcaacaaagctttgtttaggaataa 24011343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 44644 - 44784
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggttaaa-tattag 193  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||    
T  44644 ttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgctaaaatatt-aggttaaaatattag 44742  T
Q  194 g-tataattagggcaacaatgctttgtttatgaataaaagat 234  Q
    | || |||||||||||| | |||||||||| |||||| ||||    
T  44743 gttaaaattagggcaaccaagctttgtttaggaataagagat 44784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 48828 - 48794
Alignment:
Q  130 ttaggaaatatggttaggttttgaaggagggaaaa 164  Q
    |||||||||||||||||||||||||| ||||||||    
T  48828 ttaggaaatatggttaggttttgaagaagggaaaa 48794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 51514 - 51546
Alignment:
Q  139 atggttaggttttgaaggagggaaaagtggcta 171  Q
    |||||||||||||||||||||||||||| ||||    
T  51514 atggttaggttttgaaggagggaaaagttgcta 51546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 359 - 243
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| ||| ||  |||| |||||||||| || ||||||||||||||     
T  359 tttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgctaaaatattagggttaaaatattaggttaaaattagggcaacaaa 260  T
Q  213 gctttgtttatgaataa 229  Q
    |||||||||| ||||||    
T  259 gctttgtttaggaataa 243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Complemental strand, 417 - 388
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  417 tttggaggaggggaattaggaaatatggtt 388  T

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Target: scaffold0345 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 10270 - 10154
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| ||| ||  |||| |||||||||| || ||||||||||||||     
T  10270 tttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgctaaaatattagggttaaaatattaggttaaaattagggcaacaaa 10171  T
Q  213 gctttgtttatgaataa 229  Q
    |||||||||| ||||||    
T  10170 gctttgtttaggaataa 10154  T

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Target: scaffold0345; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Complemental strand, 10328 - 10299
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  10328 tttggaggaggggaattaggaaatatggtt 10299  T

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Target: scaffold0105 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 28710 - 28826
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| ||| ||  |||| |||||||||| || ||||||||||||||     
T  28710 tttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgctaaaatattagggttaaaatattaggttaaaattagggcaacaaa 28809  T
Q  213 gctttgtttatgaataa 229  Q
    |||||||||| ||||||    
T  28810 gctttgtttaggaataa 28826  T

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Target: scaffold0105; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Original strand, 28652 - 28681
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  28652 tttggaggaggggaattaggaaatatggtt 28681  T

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Target: scaffold1113 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold1113
Description:

Target: scaffold1113; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 2488 - 2564
Alignment:
Q  95 ttaggaaatcatgattatgatttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 171  Q
    ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2488 ttaggaaatcatggttagggtttagaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 2564  T

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Target: scaffold0374 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 117 - 233
Alignment:
Q  115 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttttaggtt-aaatattagg-tataattagggcaacaat 212  Q
    ||||||||||| ||||||||||||||| ||||||||| |||||||||||||| |||| ||| ||  |||| |||||||||| || ||||||||||||||     
T  117 tttggaggaggagaattaggaaatatgcttaggttttaaaggagggaaaagttgctaaaatattagggttaaaatattaggttaaaattagggcaacaaa 216  T
Q  213 gctttgtttatgaataa 229  Q
    |||||||||| ||||||    
T  217 gctttgtttaggaataa 233  T

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Target: scaffold0374; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Original strand, 59 - 88
Alignment:
Q  115 tttggaggaggggaattaggaaatatggtt 144  Q
    ||||||||||||||||||||||||||||||    
T  59 tttggaggaggggaattaggaaatatggtt 88  T

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Target: scaffold0119 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 29223 - 29293
Alignment:
Q  161 aaaagtggctacaatttt-taggttaaatattaggtataattagggcaacaatgctttgtttatgaataaa 230  Q
    |||||||||||||||||| |||||||||||||||||  ||||||||||||| ||||||||||| |||||||    
T  29223 aaaagtggctacaattttttaggttaaatattaggtggaattagggcaacagtgctttgtttaagaataaa 29293  T

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Target: scaffold0119; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 35476 - 35546
Alignment:
Q  161 aaaagtggctacaatttt-taggttaaatattaggtataattagggcaacaatgctttgtttatgaataaa 230  Q
    |||||||||||||||||| |||||||||||||||||  ||||||||||||| ||||||||||| |||||||    
T  35476 aaaagtggctacaattttttaggttaaatattaggtggaattagggcaacagtgctttgtttaagaataaa 35546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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