View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14214_high_4 (Length: 352)
Name: NF14214_high_4
Description: NF14214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14214_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 1 - 342
Target Start/End: Complemental strand, 34972056 - 34971714
Alignment:
| Q |
1 |
tatttatctatattaattaattcttcataattattttggaatatactctatatatgtgctttatgttagagacattccctcttta-aactagccaccaaa |
99 |
Q |
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| T |
34972056 |
tatttatctatattaattaattcttcataattattttggaatatactctatatatgtgctttatgttagagacattccctctttagaactagccaccaaa |
34971957 |
T |
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| Q |
100 |
ctcaactaattacatcatatatatattctttatcttctcttgttggcttttcaaaattaaattaaacaatagcttcaatgagttcaataagcaaagctcc |
199 |
Q |
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| T |
34971956 |
ctcaactaattacatcatatatatattctttatcttctcttgttggcttttcaaaattaaattaaacaatagcttcaatgagttcaataagcaaagctcc |
34971857 |
T |
|
| Q |
200 |
ttctaacaataacatgataagttttgagtcttctgaggagagtagttggaccaagtattttgaggatttctttaacaatgatcagaaatgttctattaat |
299 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34971856 |
atccaacaataacatgataagttttgagtcttctgaggagagtagttggaccaagtattttgaggatttctttaacaatgatcagaaatgttctattaat |
34971757 |
T |
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| Q |
300 |
tctttctctgattttgatgatggctcttcttcccttgtctctg |
342 |
Q |
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| T |
34971756 |
tctttctctgattttgatgatggctcttcttcccttgtctctg |
34971714 |
T |
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