View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14217_high_11 (Length: 278)
Name: NF14217_high_11
Description: NF14217
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14217_high_11 |
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Alignment Details
Target: chr5 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 8 - 262
Target Start/End: Original strand, 3287674 - 3287928
Alignment:
| Q |
8 |
ccaagaatatattatagtgaatttcttttctcagctcagcacttctcagatgtccctctggtttaacaggattttagaatccatatggacgtgtaaaaat |
107 |
Q |
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| T |
3287674 |
ccaaaaatatattatagtgaatttcttttctcagctcagcacttctcagatgtccctctggtttaacaggattttagaatccatctggacgtgtaaaaat |
3287773 |
T |
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| Q |
108 |
gttgcaaaaccctccctattttacacgcggaattttaaaatcccgacaaatcatgagtcaatgagatgtgtataggatagaaaaagaaaccgtctaaatt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3287774 |
gttgcaaaaccctccctattttacacgcggaattttaaaatcccgacaaatcatgagtcaatgagatgtgtataggatagaaaaagaaaccgtctaaatt |
3287873 |
T |
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| Q |
208 |
gtaagcagaaaaccatgagacccaacccaatggaatgaagctgtaaccaatccct |
262 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3287874 |
gtaagcagaaaaccatgagacccaacccaatggaatgaagctgtaaccaatccct |
3287928 |
T |
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