View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14218_high_5 (Length: 358)
Name: NF14218_high_5
Description: NF14218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14218_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 1 - 346
Target Start/End: Original strand, 25011373 - 25011720
Alignment:
| Q |
1 |
taacttcactgttattggggaaaaaacaaaagctcaagaaacatagtagattgttgtcttgctacaaaaagattgtaaacaaattccactaagctggtga |
100 |
Q |
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| T |
25011373 |
taacttcactgttattggggaaaaaacaaaagctcaagaaacatagtagattgttgtcttgctacaaaaagattgtaaacaaattccactaagctggtga |
25011472 |
T |
|
| Q |
101 |
aactagtatatctgaaa-cacgttgctttgtcaaattatcgtttcgtgtaagtgctatacactattcgaagaattccacaggattgaagagtaagtttga |
199 |
Q |
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| T |
25011473 |
aactagtatatctgaaaacacgttgctttgtcaaattatcgtttcgaaaaagtgctatacactattcgaagaattccacaggattgaagagtaagtttga |
25011572 |
T |
|
| Q |
200 |
agagaaattattgaaaccgtcaagttgagtactcacagagtgaagaatccctttggttgtaacatcaaatgcacctgcagtaccaccagcagcactgatc |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25011573 |
agagaaattattgaaaccgtcaagttgagtactcacagagtgaagaatccctttggttgtaacatcaaatgcacctgcagtaccaccagcagcactgatc |
25011672 |
T |
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| Q |
300 |
cagtcaacgatcctctgcctgtgtgcatcttgatgatg-tccatctca |
346 |
Q |
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|||||||||||||||||||||||||||||||||| ||| ||||||||| |
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| T |
25011673 |
cagtcaacgatcctctgcctgtgtgcatcttgattatgatccatctca |
25011720 |
T |
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