View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1422-Insertion-10 (Length: 534)
Name: NF1422-Insertion-10
Description: NF1422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1422-Insertion-10 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 515; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 515; E-Value: 0
Query Start/End: Original strand, 8 - 534
Target Start/End: Complemental strand, 30702739 - 30702213
Alignment:
| Q |
8 |
acaatagtgtaacaatggtatcaactaagacctcataaattaaataacaaacaacataatttaactcatgtatgatcaattaattttaacaaaaatcatg |
107 |
Q |
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| T |
30702739 |
acaatagtgtaacaatggtatcaactaagacctcataaattaaataacaaacaacataatttaactcatgcatgatcaattaattttaacaaaaatcatg |
30702640 |
T |
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| Q |
108 |
agattggtggtacctgcaatatagtatgactgtgagtgctgctgaatatttgggatgacaacttctgtcctcaaactatcaagatcttgtaaataatttg |
207 |
Q |
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| T |
30702639 |
agattggtggtacctgcaatatagtatgactgtgagtgctgctgaatatttgggatgacaacttctgtcctcaaactatcaagatcttgtaaataatttg |
30702540 |
T |
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| Q |
208 |
aacaatatgtattataaatggtagtagaatcaacaataccattcttatgatttccatgatgaagatgatgataatctacagcattatgatcaggtgtttc |
307 |
Q |
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| T |
30702539 |
aacaatatgtattataaatggtagtagaatcaacaataccattcttatgatttccatgatgaagatgatgataatctacagcattatgatcaggtgtttc |
30702440 |
T |
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| Q |
308 |
tgctctaactttccctcgaggttgcacttgcaccaattggttttggtgatctctaaacatcttaagttcatcaaataatcttttatactcattgtaaact |
407 |
Q |
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| T |
30702439 |
tgctctaactttcccttgaggttgcacttgcaccaattggttttgatgatctctaaacatcttaagttcatcaaataatcttttatactcattgtaaact |
30702340 |
T |
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| Q |
408 |
tttgtatactctccataagaaccatttattggatccttttgcctagaaagtgcttcccatatcaatgaatccacaacttttcttctatctccctcttgag |
507 |
Q |
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| T |
30702339 |
tttgtatactctccataagaaccatttattggatccttttgcctagaaagtgcttcccatatcaatgaatccacaacttttcttctatctccctcttgag |
30702240 |
T |
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| Q |
508 |
cattccttacaaactttgttatgttgc |
534 |
Q |
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| T |
30702239 |
cattccttacaaactttgttatgttgc |
30702213 |
T |
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