View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1422-Insertion-16 (Length: 418)
Name: NF1422-Insertion-16
Description: NF1422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1422-Insertion-16 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 8 - 418
Target Start/End: Complemental strand, 43104366 - 43103956
Alignment:
| Q |
8 |
gtaaagaatgttggatttgtgagaaaaagaagagaatgtgcaaggcagcaaggggtagtgctccgtgggaattgcaagtgggaagagtaggaagaagctg |
107 |
Q |
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| T |
43104366 |
gtaaagaatgttggatttgtgagaaaaagaagagaatgtgcaaggcagcaaggggtagtgctccgtgggaatagcaagtgggaagagtaagaagaagctg |
43104267 |
T |
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| Q |
108 |
tggacattgcaagtgggaagatgatacaacnnnnnnnnnnnnggacatcatatatacagaactcatatacaaaatgaatatggatgagattatggttgtt |
207 |
Q |
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| T |
43104266 |
tggacattgcaagtgggaagatgatacaactttttattttttggacatcatatatacagcacttatatgccaaatgaatatggatgagattatggttgtt |
43104167 |
T |
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| Q |
208 |
tatcaagcagacatccattttagttttggatgtgtgaaacaatgtcactttaatctttaaatgtattgaaattgcaatcatatccaaagataatggtaag |
307 |
Q |
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| T |
43104166 |
tatcaagcagacatccattttagttttggatgtgtgaaacaatgtcactttaatctttaaatgtattgaaattgcaatcatatccaaagataatggtaag |
43104067 |
T |
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| Q |
308 |
taataacaacttatcacctattcaatcaccaaaatgattgtttgcatgtttgtttggccnnnnnnnngttcctttggcataagttgtggtcaaaacttat |
407 |
Q |
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| T |
43104066 |
tgataacaacttatcacctattcaatcaccaaaatgattgtttgcatgtttgtttggccttttttttgttcctttggcataagttgtggtcaaaacttat |
43103967 |
T |
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| Q |
408 |
agtccattaca |
418 |
Q |
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| T |
43103966 |
agtccattaca |
43103956 |
T |
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