View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1422-Insertion-23 (Length: 632)
Name: NF1422-Insertion-23
Description: NF1422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1422-Insertion-23 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 489; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 489; E-Value: 0
Query Start/End: Original strand, 8 - 632
Target Start/End: Original strand, 33836794 - 33837418
Alignment:
| Q |
8 |
atttatgcacacaattttgaaacatagacaccaaaaataatacaaat-----ggtatacgttttgtccttccttaaaaattttcagttcacgcttcgatg |
102 |
Q |
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| T |
33836794 |
atttatgcacacaattttgaaacatagacaccaaaaataatacaaattaaatggtgtacgttttgtccttctttaaaaaatttcagttcacgcatcgatg |
33836893 |
T |
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| Q |
103 |
tccccactcattcatcgagtgtatattggtgtacgatgtcgtcaatataatgttggtcaaacttgtgttccaataacatgcctctatagtatctttggtc |
202 |
Q |
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| T |
33836894 |
tccccactcattcatcgagtgtatattggtgtacgatgtc---aatactatattggacaaacttgtgttccaataacatgcctctatagtatgtttggtc |
33836990 |
T |
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| Q |
203 |
ttttccgtagactttattcactaaagatcattttaattgaagtattgttagatattaaatataaatactcctgttcatttagaatttgaaccttaattcg |
302 |
Q |
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| T |
33836991 |
ttt-ctgtagacttcattcattaaagatcattctaattgaagtattgttagatattaaatataaatactta-gttcatttagaatttgaaccttaattcg |
33837088 |
T |
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| Q |
303 |
ttaggtgataaggatataacatcatcctccacttgattcaatccctattagaaaacctattggggagttaccataacacaaaactaaaacaacaactaaa |
402 |
Q |
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| T |
33837089 |
ttaggtgataaggatataacatcatcctccacttgattcaatccctattagaaaacctattggggagttaccataacacaaaactaaaacaacaactaaa |
33837188 |
T |
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| Q |
403 |
tggacaatgatctttatgggttttaatgacaattttttgagatcagttgaagtttgattcttgtgttttgttgacaaggaacgtgtggcgcagcctttat |
502 |
Q |
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| T |
33837189 |
tggacaatgatctttatgggtgttaatgacaactttttgagatcagttgaagtttgattcttgtgttttgttgacaaggaacatgtggcgcagcctttat |
33837288 |
T |
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| Q |
503 |
tgacaagggaaggccattgtttttgttgtatctatagtatatgtatacgtgtatatccacgtgcatgtgcttttcacgcctgatctcataatagtaccta |
602 |
Q |
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| T |
33837289 |
tgacaagggaaggccattg-ttttgttgtatctatagtatatgtatacgtatatatccacgtgcatgtgcttttcacgcctgatctcataatagtaccta |
33837387 |
T |
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| Q |
603 |
accaaatgac-aaattttcctaaacaacaaa |
632 |
Q |
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| T |
33837388 |
accaaatgacaaaattttcctaaacaacaaa |
33837418 |
T |
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