View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1422-Insertion-40 (Length: 301)
Name: NF1422-Insertion-40
Description: NF1422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1422-Insertion-40 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 8 - 301
Target Start/End: Complemental strand, 40846812 - 40846523
Alignment:
| Q |
8 |
cttttccttcgatagtaccttagaactgagcaaccaatattggattgtaacttaccgctgcaaagtgcaaacctaacaatgcaggtaaaacgaatcagct |
107 |
Q |
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| T |
40846812 |
cttttccttcgatagtaccttagaactgagcaaccaatattggcttgtaacttactactgcaaagtgcaaacctaacaatgcaggtaaaacgaatcagct |
40846713 |
T |
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| Q |
108 |
gacaagattataaagttgcgttgnnnnnnnnaagctgttggatataattattacacagtctagattacaacttcttcaaaccattgactttatttttata |
207 |
Q |
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| T |
40846712 |
gacaagattataaagttgcgttgttttttttaagctgttggata--attattaca--gtctagattacaacttcttcaaaccattgactttatttttata |
40846617 |
T |
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| Q |
208 |
agcataatttttattgaaagagactaaactagcacaagatgtgcaaagtagctctaagaccatcatacagttcaatgtgaagacagtgccttcc |
301 |
Q |
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| T |
40846616 |
agcataatttttattgaaagagactaaactagcacaagatgtgcaaagtagctctaagaccatcacacagttcaatgtgaagacagtgccttcc |
40846523 |
T |
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