View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1422-Insertion-41 (Length: 232)

Name: NF1422-Insertion-41
Description: NF1422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1422-Insertion-41
NF1422-Insertion-41
[»] chr6 (9 HSPs)
chr6 (8-227)||(11170743-11170962)
chr6 (8-227)||(11209565-11209784)
chr6 (11-232)||(11196899-11197120)
chr6 (8-227)||(11276127-11276346)
chr6 (8-230)||(11156443-11156665)
chr6 (11-232)||(11200064-11200289)
chr6 (11-232)||(11241217-11241438)
chr6 (8-232)||(11161310-11161546)
chr6 (52-230)||(11133211-11133389)
[»] scaffold1207 (1 HSPs)
scaffold1207 (8-227)||(1061-1277)
[»] chr7 (12 HSPs)
chr7 (74-152)||(8382727-8382805)
chr7 (71-152)||(13333307-13333388)
chr7 (71-151)||(10494226-10494306)
chr7 (74-152)||(8602213-8602291)
chr7 (71-152)||(8667655-8667736)
chr7 (71-151)||(8585558-8585638)
chr7 (71-150)||(8628768-8628847)
chr7 (71-145)||(27830733-27830807)
chr7 (78-140)||(29577532-29577594)
chr7 (71-152)||(8654686-8654767)
chr7 (72-152)||(6789749-6789829)
chr7 (71-151)||(8671482-8671562)
[»] chr4 (2 HSPs)
chr4 (72-152)||(9335742-9335822)
chr4 (71-152)||(35132684-35132765)
[»] chr2 (1 HSPs)
chr2 (119-152)||(7542510-7542543)
[»] chr1 (1 HSPs)
chr1 (71-151)||(34466645-34466725)


Alignment Details
Target: chr6 (Bit Score: 200; Significance: 1e-109; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 227
Target Start/End: Original strand, 11170743 - 11170962
Alignment:
Q  8 caaagtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagccgcagtaggccca 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  11170743 caaagtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctca 11170842  T
Q  108 ttgagtattcgcataacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacat 207  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11170843 ttgagtattcgcaaaacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacat 11170942  T
Q  208 ccttcactgttgatccaagg 227  Q
    ||| |||| |||||||||||    
T  11170943 cctccactattgatccaagg 11170962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 8 - 227
Target Start/End: Original strand, 11209565 - 11209784
Alignment:
Q  8 caaagtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagccgcagtaggccca 107  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| | ||| |||||||||||||||||| ||||||||| ||    
T  11209565 caaagtaccaccacctaagtcaaatatgaaaacatttctacgtccatgattaaatggtttcatgccaaagccatatgcaattgcagctgcagtaggctca 11209664  T
Q  108 ttgagtattcgcataacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacat 207  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11209665 ttgagtattcgcaaaacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacat 11209764  T
Q  208 ccttcactgttgatccaagg 227  Q
    | | ||||||||||||||||    
T  11209765 catccactgttgatccaagg 11209784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 11 - 232
Target Start/End: Original strand, 11196899 - 11197120
Alignment:
Q  11 agtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagccgcagtaggcccattg 110  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||| ||||||||||||||||| |||| |||| |||||    
T  11196899 agtaccaccacctaaatcaaaaatgaaaacatgtctacatccatgattaaaaggtttcatgtcaagaccatatgcaattgcagctgcagaaggctcattg 11196998  T
Q  111 agtattcgcataacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacatcct 210  Q
    | |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11196999 attattcgcataacattgaggccagcaataacacccgcatctcgagtggactggcgttgtgagtcattaaagtaagcaggcacagttataacaacatcct 11197098  T
Q  211 tcactgttgatccaaggtaagc 232  Q
    ||||||||||||||||||||||    
T  11197099 tcactgttgatccaaggtaagc 11197120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 8 - 227
Target Start/End: Original strand, 11276127 - 11276346
Alignment:
Q  8 caaagtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagccgcagtaggccca 107  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  || || |||||||||||||||||| ||||||||| ||    
T  11276127 caaagtaccaccacctaagtcaaatatgaaaacatttctacatccatgattaaatggtttcgtgttaaagccatatgcaattgcagctgcagtaggctca 11276226  T
Q  108 ttgagtattcgcataacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacat 207  Q
    || | |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11276227 tttattattcgcataacgtttaggccagcaatagcacccgcatctcgagtagactggcgctgtgagtcattaaagtatgcaggcacagttataacaacat 11276326  T
Q  208 ccttcactgttgatccaagg 227  Q
    ||| ||||||| ||||||||    
T  11276327 cctccactgttaatccaagg 11276346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 8 - 230
Target Start/End: Original strand, 11156443 - 11156665
Alignment:
Q  8 caaagtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagccgcagtaggccca 107  Q
    |||||||||||| ||||| |||||||||||||||| | |||||||||||||||| ||||||| |||||| ||||||||||||||||| |||| |||| ||    
T  11156443 caaagtaccacctcctaaatcaaaaatgaaaacatgtttacatccatgattaaaaggtttcatgtcaagaccatatgcaattgcagctgcagaaggctca 11156542  T
Q  108 ttgagtattcgcataacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacat 207  Q
    |||| |||||||||||||||||||||||||||| ||||||||||| | || |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11156543 ttgattattcgcataacattgaggccagcaataacacccgcatcttgggtggactggcgttgtgagtcattaaagtaagcaggcacagttataacaacat 11156642  T
Q  208 ccttcactgttgatccaaggtaa 230  Q
    |||||||||||||||||||||||    
T  11156643 ccttcactgttgatccaaggtaa 11156665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 232
Target Start/End: Original strand, 11200064 - 11200289
Alignment:
Q  11 agtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagccgcagtaggcccattg 110  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||| |||| |||| |||||    
T  11200064 agtaccaccacctaaataaaaaatgaaaacatttctacatccatgattaaaaggtttcatgtcaagaccatatgcaattgcagctgcagaaggctcattg 11200163  T
Q  111 agtattcgcataacattgaggccagcaatagcacccgcatctcgagtagactgg----cgttgtgagtcattaaagtatgcaggcacagttataacaaca 206  Q
    | |||||||| |||||||||||||||||||||||||||||||| ||||||||||    |||||||| ||||||||||||| ||||||| |||||||||||    
T  11200164 attattcgcaaaacattgaggccagcaatagcacccgcatctcaagtagactggcgtacgttgtgaatcattaaagtatgtaggcacaattataacaaca 11200263  T
Q  207 tccttcactgttgatccaaggtaagc 232  Q
    ||||||||||||||||||||||||||    
T  11200264 tccttcactgttgatccaaggtaagc 11200289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 11 - 232
Target Start/End: Complemental strand, 11241438 - 11241217
Alignment:
Q  11 agtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagccgcagtaggcccattg 110  Q
    ||||||||||||||| || ||||| | ||||| |||||||||||||||||  | ||||| || ||||||||||||||||||| | ||||||||| || ||    
T  11241438 agtaccaccacctaaatcgaaaattagaacatgtctacatccatgattaagagttttcatgttaaggccatatgcaattgcaactgcagtaggctcagtg 11241339  T
Q  111 agtattcgcataacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacatcct 210  Q
    | ||||| || ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11241338 attattcacaaaactttgaggccagcaatagcacccgcatctcgaatagactggcgttgtgagtcattaaagtaagcaggcacagttataacaacatcct 11241239  T
Q  211 tcactgttgatccaaggtaagc 232  Q
    ||||||||||||||||||||||    
T  11241238 tcactgttgatccaaggtaagc 11241217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 8 - 232
Target Start/End: Original strand, 11161310 - 11161546
Alignment:
Q  8 caaagtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagccgcagtaggcc-- 105  Q
    |||||||||||||||||| | |||||||||||||| | |||||||||||||||| ||||||| |||||| ||||||||||||||| | |||||||||       
T  11161310 caaagtaccaccacctaaataaaaaatgaaaacatgtatacatccatgattaaaaggtttcatgtcaagaccatatgcaattgcatctgcagtaggctag 11161409  T
Q  106 ------cattgagtattcgcataacattgaggccagcaatagcacccgcatctcgagtagactggcgt----tgtgagtcattaaagtatgcaggcacag 195  Q
          |||||| || |||||||||||| |||||| ||||||||||||||||||||||||||||||||    |||||  |||||||||||| |||||||     
T  11161410 tagagtcattgattactcgcataacattaaggccaacaatagcacccgcatctcgagtagactggcgtacgttgtgaaacattaaagtatgtaggcacaa 11161509  T
Q  196 ttataacaacatccttcactgttgatccaaggtaagc 232  Q
    |||||||||||||||||||||||||||||||||||||    
T  11161510 ttataacaacatccttcactgttgatccaaggtaagc 11161546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 52 - 230
Target Start/End: Original strand, 11133211 - 11133389
Alignment:
Q  52 catgattaaatggtttcaagtcaaggccatatgcaattgcagccgcagtaggcccattgagtattcgcataacattgaggccagcaatagcacccgcatc 151  Q
    |||||||||| ||||||  |||||| ||||||||||||||||| || |||||| | |||| |||||||||||| ||||| || |||||| |||| |||||    
T  11133211 catgattaaacggtttcttgtcaagaccatatgcaattgcagctgctgtaggctcgttgattattcgcataacgttgagacctgcaataacacctgcatc 11133310  T
Q  152 tcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacatccttcactgttgatccaaggtaa 230  Q
    || |||||  |||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||    
T  11133311 tctagtagcttggcgttgcgagtcattaaagtaagcaggaacagttataacgacatccttcactgttgatccaaggtaa 11133389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1207 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 8 - 227
Target Start/End: Original strand, 1061 - 1277
Alignment:
Q  8 caaagtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagccgcagtaggccca 107  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||     |||||||   ||||| |||||||||||||||||| ||||||||| ||    
T  1061 caaagtaccaccacctaagtcaaaaatgaaaacatttctatgtccatgtg---atggttttgtgtcaaagccatatgcaattgcagctgcagtaggctca 1157  T
Q  108 ttgagtattcgcataacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacat 207  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1158 ttgagtattcccaaaacattgaggccagcaatagcacctgcatctcgagtagattggcgttgtgagtcattaaagtatgcaggcacagttataacaacat 1257  T
Q  208 ccttcactgttgatccaagg 227  Q
    ||| ||||||||||||||||    
T  1258 cctccactgttgatccaagg 1277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 8382805 - 8382727
Alignment:
Q  74 aaggccatatgcaattgcagccgcagtaggcccattgagtattcgcataacattgaggccagcaatagcacccgcatct 152  Q
    ||||||||||||||  ||||| ||||| ||| |||||| ||| ||||| ||||||||||||||||| ||||| ||||||    
T  8382805 aaggccatatgcaagagcagcggcagttggctcattgattatccgcattacattgaggccagcaatcgcaccagcatct 8382727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 13333388 - 13333307
Alignment:
Q  71 gtcaaggccatatgcaattgcagccgcagtaggcccattgagtattcgcataacattgaggccagcaatagcacccgcatct 152  Q
    |||||||||||||||||| || || ||||||||  |||||| |||||| || | ||| ||||||||||||||||| ||||||    
T  13333388 gtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgatattaaggccagcaatagcaccagcatct 13333307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 151
Target Start/End: Complemental strand, 10494306 - 10494226
Alignment:
Q  71 gtcaaggccatatgcaattgcagccgcagtaggcccattgagtattcgcataacattgaggccagcaatagcacccgcatc 151  Q
    |||||||||||||||||| || || ||||||||  |||||| ||| || || ||||| ||||||||||||||||| |||||    
T  10494306 gtcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagcaccagcatc 10494226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 152
Target Start/End: Original strand, 8602213 - 8602291
Alignment:
Q  74 aaggccatatgcaattgcagccgcagtaggcccattgagtattcgcataacattgaggccagcaatagcacccgcatct 152  Q
    ||||||||||||||  ||||| ||||| ||| |||||| ||| ||||| |||||||| |||||||| ||||| ||||||    
T  8602213 aaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgagaccagcaatggcaccagcatct 8602291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 8667655 - 8667736
Alignment:
Q  71 gtcaaggccatatgcaattgcagccgcagtaggcccattgagtattcgcataacattgaggccagcaatagcacccgcatct 152  Q
    |||||||||||||||||| || |||||||||||  |||||| ||| || || ||||| || |||||||||| ||| ||||||    
T  8667655 gtcaaggccatatgcaatagctgccgcagtaggttcattgattatccgaatgacattaagtccagcaatagtaccagcatct 8667736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 151
Target Start/End: Complemental strand, 8585638 - 8585558
Alignment:
Q  71 gtcaaggccatatgcaattgcagccgcagtaggcccattgagtattcgcataacattgaggccagcaatagcacccgcatc 151  Q
    |||||||||||||||||| || || ||||| ||  |||||| ||| | ||||||||| ||||||||||| ||||| |||||    
T  8585638 gtcaaggccatatgcaatagctgcagcagtgggttcattgattatcctcataacattaaggccagcaatggcaccagcatc 8585558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 8628768 - 8628847
Alignment:
Q  71 gtcaaggccatatgcaattgcagccgcagtaggcccattgagtattcgcataacattgaggccagcaatagcacccgcat 150  Q
    |||||||||||||||||| || || ||||| ||  |||||| ||| | ||||||||| ||||||||||| ||||| ||||    
T  8628768 gtcaaggccatatgcaatagctgcagcagtggggtcattgattatcctcataacattaaggccagcaatggcaccagcat 8628847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 27830807 - 27830733
Alignment:
Q  71 gtcaaggccatatgcaattgcagccgcagtaggcccattgagtattcgcataacattgaggccagcaatagcacc 145  Q
    |||||||||||||||||| || || ||||||||| |  | | ||| ||||||||||| ||||||||||| |||||    
T  27830807 gtcaaggccatatgcaatagctgcagcagtaggctcgcttattatccgcataacattaaggccagcaatggcacc 27830733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 29577594 - 29577532
Alignment:
Q  78 ccatatgcaattgcagccgcagtaggcccattgagtattcgcataacattgaggccagcaata 140  Q
    |||||||||| |||||| ||||| ||  |||||| ||| ||||| ||||||||||||||||||    
T  29577594 ccatatgcaagtgcagcagcagttggttcattgattatccgcattacattgaggccagcaata 29577532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 8654686 - 8654767
Alignment:
Q  71 gtcaaggccatatgcaattgcagccgcagtaggcccattgagtattcgcataacattgaggccagcaatagcacccgcatct 152  Q
    |||||||||||||||||| || || ||||||||  |||||||||| || || || || || |||||||| ||||| ||||||    
T  8654686 gtcaaggccatatgcaatagctgcggcagtaggttcattgagtatccgaatgacgttaagtccagcaatggcaccagcatct 8654767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 152
Target Start/End: Original strand, 6789749 - 6789829
Alignment:
Q  72 tcaaggccatatgcaattgcagccgcagtaggcccattgagtattcgcataacattgaggccagcaatagcacccgcatct 152  Q
    ||||||||||||||||  ||||| || || ||  |||||| |||||| |||||||| || |||||||| ||||| ||||||    
T  6789749 tcaaggccatatgcaagagcagcagctgttggttcattgattattcgtataacattaagaccagcaatggcaccagcatct 6789829  T

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Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 151
Target Start/End: Complemental strand, 8671562 - 8671482
Alignment:
Q  71 gtcaaggccatatgcaattgcagccgcagtaggcccattgagtattcgcataacattgaggccagcaatagcacccgcatc 151  Q
    |||||||||||||||||| || || ||||||||  |||||| ||| || || ||||| || |||||||||| ||| |||||    
T  8671562 gtcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaagtccagcaatagtaccagcatc 8671482  T

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Target: chr4 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 152
Target Start/End: Complemental strand, 9335822 - 9335742
Alignment:
Q  72 tcaaggccatatgcaattgcagccgcagtaggcccattgagtattcgcataacattgaggccagcaatagcacccgcatct 152  Q
    ||||||||||||||||| || || ||||||||  |||||| ||| || || ||||| ||||||||||||| ||| ||||||    
T  9335822 tcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagtaccagcatct 9335742  T

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Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 35132684 - 35132765
Alignment:
Q  71 gtcaaggccatatgcaattgcagccgcagtaggcccattgagtattcgcataacattgaggccagcaatagcacccgcatct 152  Q
    |||||||||||||||||  || || ||||||||  |||| | || || |||||||||| | |||||||||||||| ||||||    
T  35132684 gtcaaggccatatgcaaccgctgcggcagtaggttcattcattactctcataacattgggaccagcaatagcaccagcatct 35132765  T

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Target: chr2 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 152
Target Start/End: Original strand, 7542510 - 7542543
Alignment:
Q  119 cataacattgaggccagcaatagcacccgcatct 152  Q
    ||||||||||||||||||||| ||||||||||||    
T  7542510 cataacattgaggccagcaatggcacccgcatct 7542543  T

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Target: chr1 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 151
Target Start/End: Complemental strand, 34466725 - 34466645
Alignment:
Q  71 gtcaaggccatatgcaattgcagccgcagtaggcccattgagtattcgcataacattgaggccagcaatagcacccgcatc 151  Q
    |||||| ||||||||||| || || ||||| ||  |||||| |||| ||| |||||| ||||||||||||| ||| |||||    
T  34466725 gtcaagtccatatgcaatagctgcagcagtgggttcattgattatttgcaaaacattaaggccagcaatagtaccagcatc 34466645  T

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