View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1422-Insertion-7 (Length: 401)
Name: NF1422-Insertion-7
Description: NF1422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1422-Insertion-7 |
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Alignment Details
Target: chr4 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 8 - 306
Target Start/End: Complemental strand, 30008479 - 30008181
Alignment:
| Q |
8 |
agttgaggttgaagaaggattggaacaatcattttggttcaccttgtttcccatcatctctttcacactagaacattctggtgaaacagaaaccaaattt |
107 |
Q |
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| T |
30008479 |
agttgaggttgaagaaggattggaacaatcattttggttcaccttgtttcccatcatctctttcacactagaacattctggtgaaacagaaaccaaattt |
30008380 |
T |
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| Q |
108 |
ggaagcgaatttatcggtacggtcgaagaagaatttgtagcatcaaatacttcatcaaccttttgatcagacttctagcaactactactattgctgctgc |
207 |
Q |
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| T |
30008379 |
ggaagcgaatttatcggtaccgtcgaagaagaatttgtagcatcaaatacttcatcaaccttttgatcagacttcaagcaactactactgttgctgctgc |
30008280 |
T |
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| Q |
208 |
caccattatccataaactgatatccattgcttaaaacttgttgcatctgaggtacttgaaagctttgaaagttgcactgattttgagaaacaaagttgg |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
30008279 |
caccattatccataaactgatatccattgcttaaaacttgttgcatctgaggtacttgaaagctttgaaagttgcactgattttgagaagcaaagttgg |
30008181 |
T |
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