View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14220_high_3 (Length: 332)

Name: NF14220_high_3
Description: NF14220
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14220_high_3
NF14220_high_3
[»] chr6 (68 HSPs)
chr6 (8-187)||(13480413-13480593)
chr6 (1-187)||(5064334-5064521)
chr6 (8-186)||(23291949-23292128)
chr6 (8-188)||(15819694-15819876)
chr6 (3-186)||(21880364-21880548)
chr6 (8-188)||(22494085-22494265)
chr6 (68-187)||(13480207-13480326)
chr6 (8-188)||(32337769-32337952)
chr6 (68-186)||(737963-738081)
chr6 (68-185)||(23291745-23291862)
chr6 (68-188)||(20560926-20561046)
chr6 (68-183)||(5064601-5064716)
chr6 (39-186)||(20994819-20994965)
chr6 (69-188)||(26503621-26503740)
chr6 (78-187)||(30234868-30234977)
chr6 (68-189)||(32337561-32337682)
chr6 (68-183)||(20561193-20561307)
chr6 (1-184)||(7612745-7612931)
chr6 (68-186)||(21880630-21880748)
chr6 (1-181)||(1066143-1066325)
chr6 (76-186)||(20994965-20995075)
chr6 (8-185)||(26542822-26543003)
chr6 (84-185)||(3299841-3299942)
chr6 (68-160)||(22493907-22493998)
chr6 (8-187)||(3299558-3299738)
chr6 (1-187)||(3586211-3586397)
chr6 (78-172)||(9607592-9607686)
chr6 (37-188)||(20774316-20774467)
chr6 (1-188)||(31879655-31879844)
chr6 (70-186)||(8427200-8427316)
chr6 (84-196)||(7612538-7612650)
chr6 (108-188)||(16704615-16704695)
chr6 (84-188)||(19296509-19296613)
chr6 (84-188)||(26542612-26542719)
chr6 (84-186)||(1066421-1066522)
chr6 (86-188)||(17784385-17784487)
chr6 (84-186)||(33399966-33400068)
chr6 (120-185)||(13480333-13480398)
chr6 (70-187)||(22539999-22540116)
chr6 (84-188)||(4116797-4116901)
chr6 (84-188)||(4117545-4117649)
chr6 (108-188)||(16706957-16707037)
chr6 (1-172)||(31393380-31393553)
chr6 (84-183)||(20774092-20774191)
chr6 (119-185)||(20561121-20561187)
chr6 (119-185)||(23291868-23291934)
chr6 (129-186)||(31879591-31879648)
chr6 (119-186)||(1066332-1066399)
chr6 (84-183)||(1661428-1661527)
chr6 (119-186)||(3586404-3586471)
chr6 (84-187)||(31386798-31386901)
chr6 (84-183)||(31879461-31879559)
chr6 (84-187)||(33401124-33401227)
chr6 (84-190)||(14657207-14657313)
chr6 (120-186)||(21544518-21544584)
chr6 (119-185)||(32337688-32337754)
chr6 (119-184)||(7612672-7612737)
chr6 (119-160)||(21880583-21880624)
chr6 (119-184)||(22494004-22494069)
chr6 (119-160)||(26503488-26503529)
chr6 (120-184)||(5064530-5064594)
chr6 (94-157)||(8427373-8427436)
chr6 (111-150)||(15819604-15819643)
chr6 (119-186)||(26542741-26542808)
chr6 (119-172)||(737904-737957)
chr6 (90-187)||(18865119-18865216)
chr6 (119-188)||(19296418-19296487)
chr6 (121-186)||(31386925-31386989)
[»] chr2 (75 HSPs)
chr2 (8-188)||(16366961-16367142)
chr2 (1-186)||(20911328-20911513)
chr2 (8-188)||(32519360-32519541)
chr2 (2-188)||(1150136-1150323)
chr2 (8-192)||(19606911-19607097)
chr2 (68-188)||(1149935-1150055)
chr2 (68-188)||(20911128-20911248)
chr2 (12-183)||(8089661-8089831)
chr2 (68-186)||(32519155-32519273)
chr2 (68-186)||(45663774-45663892)
chr2 (68-189)||(22731798-22731919)
chr2 (1-160)||(9693768-9693928)
chr2 (1-188)||(22309429-22309617)
chr2 (8-186)||(28599632-28599811)
chr2 (68-177)||(16367229-16367338)
chr2 (1-186)||(17284933-17285119)
chr2 (67-187)||(4375816-4375936)
chr2 (1-188)||(17580526-17580711)
chr2 (86-186)||(10446832-10446932)
chr2 (68-183)||(8089455-8089570)
chr2 (1-187)||(41846391-41846578)
chr2 (8-172)||(18476921-18477086)
chr2 (8-188)||(37984932-37985113)
chr2 (1-144)||(17366820-17366964)
chr2 (84-187)||(9694024-9694127)
chr2 (68-186)||(17580328-17580446)
chr2 (84-187)||(22309713-22309816)
chr2 (86-186)||(17366626-17366726)
chr2 (66-188)||(43681854-43681977)
chr2 (70-160)||(19620777-19620867)
chr2 (10-186)||(9958826-9959002)
chr2 (71-160)||(43236530-43236619)
chr2 (84-183)||(28599430-28599529)
chr2 (84-161)||(41846674-41846751)
chr2 (71-187)||(43237705-43237821)
chr2 (84-183)||(9959107-9959206)
chr2 (113-188)||(17284741-17284816)
chr2 (71-157)||(7981076-7981162)
chr2 (84-185)||(4375550-4375651)
chr2 (84-188)||(20982522-20982626)
chr2 (84-188)||(29957815-29957919)
chr2 (119-186)||(17366750-17366817)
chr2 (84-187)||(20101769-20101872)
chr2 (119-186)||(41846585-41846652)
chr2 (67-141)||(5608637-5608711)
chr2 (68-144)||(13646122-13646198)
chr2 (68-144)||(13652075-13652151)
chr2 (119-187)||(45663700-45663768)
chr2 (84-187)||(24387350-24387453)
chr2 (113-183)||(18477187-18477257)
chr2 (84-186)||(20983259-20983361)
chr2 (70-156)||(24607944-24608030)
chr2 (84-186)||(29958545-29958647)
chr2 (119-185)||(32519279-32519345)
chr2 (119-184)||(9693937-9694002)
chr2 (119-183)||(17580452-17580516)
chr2 (86-186)||(25624433-25624533)
chr2 (119-186)||(22731725-22731792)
chr2 (119-186)||(43682050-43682117)
chr2 (119-185)||(1150061-1150127)
chr2 (119-185)||(16367157-16367223)
chr2 (67-156)||(11830225-11830314)
chr2 (119-160)||(20911254-20911295)
chr2 (84-188)||(20103142-20103246)
chr2 (86-186)||(25623288-25623388)
chr2 (68-107)||(19607130-19607169)
chr2 (119-186)||(22309624-22309691)
chr2 (119-185)||(8089576-8089642)
chr2 (70-144)||(15075144-15075218)
chr2 (120-186)||(28599552-28599618)
chr2 (74-144)||(34404967-34405037)
chr2 (68-181)||(33881580-33881693)
chr2 (119-183)||(4375673-4375737)
chr2 (84-160)||(5608876-5608952)
chr2 (92-160)||(7983816-7983884)
[»] chr1 (103 HSPs)
chr1 (1-189)||(1047402-1047591)
chr1 (1-187)||(26953100-26953287)
chr1 (1-186)||(2953464-2953650)
chr1 (1-183)||(49002879-49003061)
chr1 (1-185)||(5183507-5183692)
chr1 (8-183)||(29980642-29980817)
chr1 (1-186)||(739416-739602)
chr1 (1-189)||(33347413-33347602)
chr1 (1-195)||(24701261-24701456)
chr1 (8-180)||(37152544-37152717)
chr1 (68-186)||(2953730-2953848)
chr1 (1-187)||(25414843-25415030)
chr1 (8-186)||(29042960-29043139)
chr1 (68-188)||(6056374-6056494)
chr1 (68-187)||(1040297-1040416)
chr1 (68-187)||(1047203-1047322)
chr1 (187-298)||(49258945-49259056)
chr1 (68-187)||(12577278-12577397)
chr1 (68-187)||(19755671-19755790)
chr1 (68-186)||(46849924-46850042)
chr1 (1-188)||(12577008-12577198)
chr1 (68-188)||(739217-739337)
chr1 (68-188)||(49003141-49003261)
chr1 (68-187)||(33347682-33347801)
chr1 (8-183)||(46849661-46849837)
chr1 (67-181)||(5926524-5926638)
chr1 (8-187)||(48380886-48381068)
chr1 (68-185)||(25415110-25415227)
chr1 (68-185)||(29980904-29981021)
chr1 (68-185)||(37152804-37152921)
chr1 (75-187)||(46364573-46364685)
chr1 (68-186)||(5183772-5183890)
chr1 (8-187)||(8890211-8890388)
chr1 (8-186)||(6056581-6056763)
chr1 (84-193)||(48380674-48380783)
chr1 (68-186)||(5926787-5926905)
chr1 (67-188)||(33030600-33030720)
chr1 (68-188)||(29042754-29042873)
chr1 (8-188)||(35311972-35312155)
chr1 (84-187)||(33030333-33030436)
chr1 (68-185)||(26953367-26953484)
chr1 (84-188)||(8890491-8890595)
chr1 (68-188)||(28533775-28533895)
chr1 (68-160)||(46364841-46364933)
chr1 (66-186)||(49990060-49990180)
chr1 (1-186)||(34175922-34176109)
chr1 (84-163)||(46545013-46545092)
chr1 (84-186)||(46282071-46282173)
chr1 (68-150)||(49989831-49989913)
chr1 (17-172)||(10019387-10019543)
chr1 (78-154)||(37152465-37152541)
chr1 (1-150)||(30830166-30830317)
chr1 (68-188)||(2828191-2828311)
chr1 (84-188)||(35312258-35312362)
chr1 (84-188)||(52455037-52455140)
chr1 (84-158)||(10019655-10019729)
chr1 (70-187)||(28534780-28534897)
chr1 (75-185)||(52454757-52454866)
chr1 (78-187)||(6334655-6334764)
chr1 (68-153)||(6345619-6345704)
chr1 (84-197)||(24701551-24701664)
chr1 (68-188)||(30830397-30830515)
chr1 (119-185)||(6056500-6056566)
chr1 (119-185)||(29042879-29042945)
chr1 (119-185)||(46364769-46364835)
chr1 (8-94)||(46544823-46544910)
chr1 (119-185)||(46849852-46849918)
chr1 (84-186)||(51935197-51935299)
chr1 (84-181)||(46282791-46282888)
chr1 (84-172)||(34176206-34176294)
chr1 (119-186)||(10019566-10019633)
chr1 (86-189)||(13295132-13295235)
chr1 (119-186)||(24701463-24701530)
chr1 (119-186)||(30830324-30830391)
chr1 (122-185)||(33347610-33347673)
chr1 (84-187)||(49093040-49093143)
chr1 (119-185)||(12577206-12577272)
chr1 (119-185)||(19755599-19755665)
chr1 (119-185)||(25415038-25415104)
chr1 (119-160)||(1040422-1040463)
chr1 (119-160)||(1047328-1047369)
chr1 (68-153)||(6344288-6344373)
chr1 (86-183)||(25064936-25065033)
chr1 (120-185)||(29980832-29980897)
chr1 (119-184)||(33030458-33030523)
chr1 (119-188)||(46544758-46544827)
chr1 (119-184)||(49003070-49003135)
chr1 (84-181)||(50062946-50063043)
chr1 (119-183)||(26953297-26953361)
chr1 (68-192)||(52563645-52563769)
chr1 (145-188)||(10019729-10019772)
chr1 (119-186)||(37152731-37152798)
chr1 (119-186)||(52454948-52455015)
chr1 (119-185)||(5183700-5183766)
chr1 (84-142)||(49093811-49093869)
chr1 (8-57)||(51933903-51933953)
chr1 (120-185)||(8890403-8890468)
chr1 (117-190)||(32238695-32238768)
chr1 (84-181)||(32619389-32619486)
chr1 (84-181)||(32622354-32622451)
chr1 (119-159)||(739343-739383)
chr1 (70-142)||(2829523-2829595)
chr1 (68-160)||(52564933-52565025)
[»] chr7 (65 HSPs)
chr7 (8-187)||(43937893-43938073)
chr7 (1-187)||(37563353-37563540)
chr7 (1-188)||(26825628-26825816)
chr7 (68-187)||(43938160-43938279)
chr7 (70-189)||(37563622-37563741)
chr7 (1-198)||(34454472-34454666)
chr7 (68-187)||(12929520-12929639)
chr7 (68-179)||(12931004-12931115)
chr7 (37-187)||(12930771-12930921)
chr7 (8-188)||(5636230-5636411)
chr7 (8-186)||(27558053-27558236)
chr7 (68-188)||(34454746-34454866)
chr7 (67-188)||(12928035-12928155)
chr7 (67-187)||(12929286-12929406)
chr7 (76-188)||(26825904-26826016)
chr7 (84-186)||(5280553-5280655)
chr7 (8-188)||(47081845-47082026)
chr7 (70-187)||(5280271-5280388)
chr7 (84-183)||(20947196-20947295)
chr7 (79-185)||(25049438-25049544)
chr7 (68-185)||(12928305-12928422)
chr7 (8-151)||(15827756-15827900)
chr7 (70-188)||(7159197-7159314)
chr7 (8-185)||(20947398-20947577)
chr7 (67-186)||(23191119-23191239)
chr7 (67-185)||(47121543-47121661)
chr7 (8-160)||(44545621-44545774)
chr7 (84-198)||(5636015-5636127)
chr7 (70-187)||(31695598-31695715)
chr7 (67-152)||(35262660-35262745)
chr7 (84-172)||(27557862-27557950)
chr7 (84-188)||(40022527-40022630)
chr7 (84-188)||(47121276-47121380)
chr7 (119-186)||(15827914-15827981)
chr7 (86-188)||(37284107-37284209)
chr7 (66-187)||(7158230-7158351)
chr7 (119-186)||(27557972-27558039)
chr7 (68-183)||(39527063-39527178)
chr7 (119-185)||(26825824-26825890)
chr7 (119-185)||(34454674-34454740)
chr7 (86-188)||(37289310-37289412)
chr7 (86-183)||(44545879-44545976)
chr7 (84-188)||(27480745-27480849)
chr7 (68-144)||(47738979-47739055)
chr7 (119-185)||(19980074-19980140)
chr7 (119-185)||(37563548-37563614)
chr7 (86-187)||(4227172-4227273)
chr7 (119-184)||(12929449-12929514)
chr7 (84-181)||(22661362-22661459)
chr7 (119-160)||(43938113-43938154)
chr7 (119-183)||(47082043-47082107)
chr7 (68-144)||(47733062-47733138)
chr7 (120-175)||(5636150-5636205)
chr7 (86-188)||(12643098-12643200)
chr7 (84-158)||(19979979-19980052)
chr7 (86-160)||(26828501-26828575)
chr7 (84-186)||(40021491-40021593)
chr7 (136-186)||(44545788-44545838)
chr7 (86-187)||(4226124-4226225)
chr7 (119-184)||(12930933-12930998)
chr7 (119-160)||(20947317-20947358)
chr7 (68-157)||(26830007-26830096)
chr7 (68-181)||(31694476-31694589)
chr7 (119-160)||(45586590-45586631)
chr7 (129-186)||(47121411-47121468)
[»] chr3 (72 HSPs)
chr3 (8-187)||(1741386-1741566)
chr3 (8-185)||(10998078-10998256)
chr3 (1-188)||(11312733-11312921)
chr3 (8-183)||(55036874-55037050)
chr3 (1-188)||(40257072-40257259)
chr3 (68-187)||(10749317-10749436)
chr3 (1-188)||(51279229-51279417)
chr3 (67-185)||(33458183-33458301)
chr3 (2-184)||(53037226-53037409)
chr3 (69-187)||(10749663-10749781)
chr3 (67-185)||(30804113-30804231)
chr3 (68-181)||(40256879-40256992)
chr3 (68-183)||(55036672-55036787)
chr3 (68-187)||(22129005-22129124)
chr3 (68-186)||(53037027-53037145)
chr3 (67-196)||(46670238-46670367)
chr3 (68-185)||(10997878-10997992)
chr3 (68-183)||(21300399-21300514)
chr3 (8-133)||(10749523-10749650)
chr3 (67-155)||(22129274-22129362)
chr3 (1-185)||(38642632-38642816)
chr3 (67-184)||(33989284-33989401)
chr3 (67-186)||(24576560-24576677)
chr3 (1-188)||(30890405-30890593)
chr3 (8-154)||(28310380-28310527)
chr3 (84-184)||(30803848-30803948)
chr3 (68-151)||(11313001-11313083)
chr3 (8-186)||(30654484-30654663)
chr3 (8-127)||(21300192-21300312)
chr3 (84-187)||(22736688-22736791)
chr3 (86-187)||(32717105-32717206)
chr3 (67-172)||(35432615-35432720)
chr3 (86-163)||(46670539-46670616)
chr3 (84-192)||(1757302-1757410)
chr3 (84-188)||(30654762-30654865)
chr3 (84-188)||(33457914-33458018)
chr3 (84-188)||(48189097-48189201)
chr3 (119-186)||(24576414-24576481)
chr3 (119-186)||(30803970-30804037)
chr3 (84-187)||(33989014-33989116)
chr3 (84-186)||(1756550-1756652)
chr3 (119-185)||(11312929-11312995)
chr3 (119-185)||(22129130-22129196)
chr3 (84-186)||(45279282-45279384)
chr3 (119-185)||(53037151-53037217)
chr3 (84-181)||(48188383-48188480)
chr3 (84-187)||(2944664-2944767)
chr3 (119-186)||(33989138-33989204)
chr3 (119-185)||(10749442-10749508)
chr3 (84-186)||(11026630-11026732)
chr3 (116-186)||(43105233-43105303)
chr3 (119-185)||(55036793-55036859)
chr3 (108-183)||(24576291-24576366)
chr3 (84-187)||(28310630-28310733)
chr3 (119-185)||(1741581-1741647)
chr3 (119-185)||(21300327-21300393)
chr3 (71-144)||(20974976-20975049)
chr3 (84-185)||(21255813-21255914)
chr3 (84-181)||(43105832-43105929)
chr3 (84-181)||(44476054-44476151)
chr3 (84-181)||(45278549-45278646)
chr3 (119-160)||(51279449-51279490)
chr3 (129-186)||(51279541-51279598)
chr3 (117-188)||(29193024-29193095)
chr3 (86-188)||(29192033-29192135)
chr3 (68-106)||(51279496-51279534)
chr3 (111-188)||(49647-49724)
chr3 (84-173)||(30890220-30890309)
chr3 (119-160)||(30890331-30890372)
chr3 (131-188)||(35432404-35432461)
chr3 (119-183)||(33458040-33458104)
chr3 (119-183)||(40256998-40257062)
[»] chr5 (74 HSPs)
chr5 (1-187)||(32052223-32052410)
chr5 (8-187)||(25253291-25253471)
chr5 (8-187)||(25317082-25317262)
chr5 (1-187)||(33735312-33735499)
chr5 (1-186)||(13064607-13064793)
chr5 (1-186)||(12990986-12991172)
chr5 (68-188)||(32052490-32052610)
chr5 (68-187)||(37944993-37945112)
chr5 (68-188)||(33735579-33735699)
chr5 (8-188)||(37945199-37945379)
chr5 (68-187)||(14745447-14745566)
chr5 (8-184)||(20704918-20705096)
chr5 (68-185)||(25253087-25253204)
chr5 (68-185)||(25316877-25316994)
chr5 (1-188)||(22533388-22533576)
chr5 (8-183)||(6421625-6421801)
chr5 (67-187)||(7015507-7015627)
chr5 (71-188)||(6421891-6422008)
chr5 (71-179)||(14745582-14745690)
chr5 (8-160)||(41339380-41339533)
chr5 (84-186)||(7015791-7015893)
chr5 (8-172)||(18013817-18013981)
chr5 (76-159)||(18013639-18013722)
chr5 (67-188)||(18934979-18935099)
chr5 (1-185)||(27753480-27753665)
chr5 (68-188)||(14744712-14744832)
chr5 (84-188)||(22024152-22024256)
chr5 (1-186)||(8323254-8323440)
chr5 (84-185)||(21260866-21260967)
chr5 (67-188)||(16117959-16118072)
chr5 (84-187)||(8654106-8654209)
chr5 (84-187)||(20072867-20072970)
chr5 (84-187)||(34404483-34404585)
chr5 (84-186)||(39181794-39181896)
chr5 (79-184)||(20704740-20704844)
chr5 (79-187)||(147383-147491)
chr5 (84-188)||(22533672-22533776)
chr5 (70-142)||(39402132-39402204)
chr5 (84-184)||(41339635-41339735)
chr5 (67-186)||(21261128-21261247)
chr5 (119-186)||(27753672-27753739)
chr5 (84-158)||(27753761-27753835)
chr5 (84-185)||(18934714-18934815)
chr5 (84-188)||(39181055-39181159)
chr5 (84-183)||(8323059-8323158)
chr5 (119-186)||(18934837-18934904)
chr5 (119-186)||(22533583-22533650)
chr5 (119-185)||(18013736-18013802)
chr5 (119-185)||(32052418-32052484)
chr5 (119-185)||(33735507-33735573)
chr5 (122-184)||(41339549-41339611)
chr5 (86-187)||(22870462-22870563)
chr5 (119-186)||(34404607-34404675)
chr5 (119-182)||(6421819-6421882)
chr5 (119-186)||(16118144-16118211)
chr5 (84-187)||(20856931-20857034)
chr5 (119-186)||(25253210-25253277)
chr5 (119-185)||(12990912-12990978)
chr5 (119-185)||(13064533-13064599)
chr5 (84-186)||(20072121-20072223)
chr5 (84-181)||(16532898-16532995)
chr5 (119-184)||(21260989-21261054)
chr5 (86-183)||(31108338-31108434)
chr5 (118-186)||(22024063-22024131)
chr5 (135-186)||(9915431-9915482)
chr5 (129-184)||(12628263-12628318)
chr5 (84-186)||(16533623-16533725)
chr5 (86-172)||(22869619-22869705)
chr5 (117-187)||(31107930-31108000)
chr5 (122-188)||(31118953-31119019)
chr5 (1-58)||(34404682-34404740)
chr5 (84-181)||(21978015-21978112)
chr5 (119-160)||(25317000-25317041)
chr5 (120-172)||(12628340-12628392)
[»] chr4 (85 HSPs)
chr4 (1-187)||(20086436-20086623)
chr4 (1-188)||(12691604-12691791)
chr4 (1-188)||(53559585-53559773)
chr4 (8-188)||(22249731-22249912)
chr4 (8-186)||(13872069-13872248)
chr4 (1-187)||(47862350-47862536)
chr4 (1-187)||(33294342-33294528)
chr4 (1-179)||(19916663-19916842)
chr4 (68-186)||(12691406-12691524)
chr4 (1-188)||(8287130-8287319)
chr4 (8-184)||(54961636-54961813)
chr4 (68-187)||(22249999-22250118)
chr4 (36-186)||(47981870-47982020)
chr4 (68-186)||(13872335-13872453)
chr4 (1-186)||(37677848-37678034)
chr4 (68-184)||(47980687-47980803)
chr4 (68-188)||(54961429-54961549)
chr4 (68-195)||(33294135-33294262)
chr4 (1-172)||(50245871-50246043)
chr4 (68-182)||(34238474-34238588)
chr4 (68-186)||(47862152-47862270)
chr4 (84-190)||(50246140-50246246)
chr4 (84-185)||(37678130-37678231)
chr4 (84-186)||(19916938-19917040)
chr4 (84-195)||(35730943-35731054)
chr4 (67-188)||(48507682-48507803)
chr4 (68-152)||(26601342-26601426)
chr4 (66-187)||(13336818-13336939)
chr4 (68-133)||(53559440-53559505)
chr4 (74-142)||(52339239-52339307)
chr4 (67-184)||(34238735-34238845)
chr4 (116-186)||(19740860-19740930)
chr4 (84-185)||(32846363-32846464)
chr4 (70-187)||(53475830-53475947)
chr4 (70-187)||(53477064-53477181)
chr4 (84-188)||(8286930-8287034)
chr4 (84-188)||(38814325-38814429)
chr4 (67-186)||(27813318-27813436)
chr4 (119-186)||(37678041-37678108)
chr4 (120-186)||(20601072-20601138)
chr4 (68-185)||(20086703-20086820)
chr4 (84-188)||(52816421-52816525)
chr4 (84-188)||(56556580-56556684)
chr4 (119-186)||(8287056-8287123)
chr4 (89-188)||(22882330-22882429)
chr4 (89-188)||(22933994-22934093)
chr4 (68-199)||(48507401-48507532)
chr4 (68-183)||(54590146-54590261)
chr4 (70-186)||(54591560-54591678)
chr4 (119-185)||(12691530-12691596)
chr4 (119-185)||(33294268-33294334)
chr4 (119-185)||(34238594-34238660)
chr4 (120-186)||(37732397-37732463)
chr4 (84-186)||(38813554-38813656)
chr4 (119-185)||(47862276-47862342)
chr4 (119-195)||(23454945-23455021)
chr4 (67-103)||(35730731-35730767)
chr4 (68-144)||(53752278-53752354)
chr4 (68-184)||(53753400-53753516)
chr4 (119-186)||(35730854-35730921)
chr4 (84-182)||(489466-489564)
chr4 (84-182)||(515258-515356)
chr4 (119-185)||(20086631-20086697)
chr4 (119-185)||(22249927-22249993)
chr4 (86-188)||(23455689-23455791)
chr4 (119-185)||(53559511-53559577)
chr4 (129-186)||(27813182-27813239)
chr4 (119-172)||(48507538-48507591)
chr4 (84-185)||(56557323-56557424)
chr4 (84-184)||(27813051-27813151)
chr4 (84-144)||(45199169-45199229)
chr4 (119-186)||(50246050-50246118)
chr4 (116-188)||(52815661-52815733)
chr4 (119-186)||(489376-489443)
chr4 (119-186)||(515168-515235)
chr4 (67-122)||(20601211-20601266)
chr4 (129-188)||(35730660-35730719)
chr4 (8-58)||(35730789-35730840)
chr4 (70-188)||(9254404-9254522)
chr4 (74-144)||(13231281-13231351)
chr4 (68-186)||(22881167-22881285)
chr4 (68-186)||(22932831-22932949)
chr4 (119-185)||(47980809-47980875)
chr4 (84-160)||(20600973-20601049)
chr4 (84-188)||(55013087-55013190)
[»] chr8 (91 HSPs)
chr8 (1-196)||(40525705-40525901)
chr8 (1-188)||(41182094-41182282)
chr8 (8-186)||(43866916-43867095)
chr8 (8-188)||(36623350-36623532)
chr8 (8-184)||(41801818-41801995)
chr8 (68-188)||(25287790-25287910)
chr8 (8-186)||(23424717-23424896)
chr8 (68-195)||(11478136-11478263)
chr8 (8-183)||(27856947-27857123)
chr8 (8-187)||(29190159-29190339)
chr8 (2-163)||(11478344-11478506)
chr8 (68-188)||(36623619-36623739)
chr8 (8-188)||(37342780-37342961)
chr8 (68-187)||(43866710-43866829)
chr8 (1-183)||(7396-7579)
chr8 (1-185)||(26739914-26740101)
chr8 (68-184)||(37343048-37343164)
chr8 (68-188)||(40525505-40525625)
chr8 (67-186)||(547431-547549)
chr8 (68-188)||(7659-7779)
chr8 (67-187)||(40422159-40422279)
chr8 (68-188)||(41251121-41251241)
chr8 (8-172)||(20096225-20096394)
chr8 (68-188)||(20096018-20096138)
chr8 (2-184)||(31690094-31690277)
chr8 (68-186)||(547701-547819)
chr8 (68-186)||(23424512-23424630)
chr8 (68-184)||(26739714-26739835)
chr8 (68-188)||(29190425-29190545)
chr8 (84-187)||(40422442-40422545)
chr8 (84-186)||(9632328-9632430)
chr8 (1-187)||(25287990-25288177)
chr8 (66-185)||(22763596-22763715)
chr8 (1-150)||(22763793-22763944)
chr8 (67-188)||(9632568-9632689)
chr8 (68-141)||(27856787-27856860)
chr8 (78-160)||(38619824-38619906)
chr8 (67-188)||(41251391-41251512)
chr8 (70-186)||(38600218-38600334)
chr8 (8-193)||(35163490-35163681)
chr8 (66-199)||(4463406-4463539)
chr8 (84-184)||(15716158-15716258)
chr8 (71-158)||(36574845-36574932)
chr8 (70-157)||(7393129-7393216)
chr8 (84-191)||(38598959-38599066)
chr8 (92-186)||(24529946-24530040)
chr8 (68-153)||(4970158-4970243)
chr8 (70-187)||(29574741-29574858)
chr8 (119-184)||(31690019-31690084)
chr8 (84-197)||(37713685-37713798)
chr8 (84-187)||(31689894-31689997)
chr8 (84-187)||(34665769-34665872)
chr8 (68-186)||(27436563-27436681)
chr8 (119-185)||(40525631-40525697)
chr8 (119-188)||(37713820-37713889)
chr8 (70-142)||(7392252-7392324)
chr8 (84-188)||(33497614-33497718)
chr8 (68-144)||(41802082-41802158)
chr8 (84-190)||(34214526-34214633)
chr8 (122-185)||(41182023-41182086)
chr8 (119-184)||(25287916-25287981)
chr8 (70-186)||(27437503-27437619)
chr8 (8-95)||(23514226-23514314)
chr8 (119-186)||(35163695-35163762)
chr8 (71-181)||(36575996-36576096)
chr8 (119-186)||(40422354-40422420)
chr8 (119-185)||(7587-7653)
chr8 (119-185)||(11478269-11478335)
chr8 (119-185)||(23424636-23424702)
chr8 (119-185)||(29190353-29190419)
chr8 (84-182)||(33497020-33497118)
chr8 (119-185)||(37342976-37343042)
chr8 (119-185)||(43866835-43866901)
chr8 (84-149)||(24529716-24529780)
chr8 (84-181)||(34666539-34666635)
chr8 (67-144)||(41767655-41767732)
chr8 (67-144)||(41773595-41773672)
chr8 (121-185)||(41251249-41251313)
chr8 (68-188)||(43073561-43073681)
chr8 (84-187)||(23514020-23514123)
chr8 (86-153)||(24377214-24377281)
chr8 (8-58)||(24529881-24529932)
chr8 (119-185)||(547629-547695)
chr8 (70-132)||(4462179-4462241)
chr8 (119-185)||(20096144-20096210)
chr8 (119-185)||(26739841-26739906)
chr8 (119-181)||(36623551-36623613)
chr8 (119-160)||(15716095-15716136)
chr8 (68-181)||(29575867-29575980)
chr8 (84-188)||(34213762-34213866)
chr8 (119-183)||(40933299-40933363)
[»] scaffold1493 (3 HSPs)
scaffold1493 (68-188)||(859-979)
scaffold1493 (1-187)||(592-779)
scaffold1493 (119-184)||(788-853)
[»] scaffold0321 (3 HSPs)
scaffold0321 (8-187)||(10867-11047)
scaffold0321 (71-188)||(10660-10777)
scaffold0321 (119-182)||(10786-10849)
[»] scaffold0206 (2 HSPs)
scaffold0206 (68-198)||(10313-10443)
scaffold0206 (120-188)||(10450-10518)
[»] scaffold0201 (3 HSPs)
scaffold0201 (1-188)||(13891-14079)
scaffold0201 (68-151)||(14159-14242)
scaffold0201 (119-183)||(14089-14153)
[»] scaffold0279 (3 HSPs)
scaffold0279 (8-186)||(10853-11036)
scaffold0279 (84-172)||(11139-11227)
scaffold0279 (119-186)||(11050-11117)
[»] scaffold0233 (3 HSPs)
scaffold0233 (69-188)||(8699-8818)
scaffold0233 (84-184)||(8435-8535)
scaffold0233 (1-56)||(8631-8687)
[»] scaffold0251 (1 HSPs)
scaffold0251 (86-188)||(12017-12119)
[»] scaffold0202 (2 HSPs)
scaffold0202 (1-187)||(14433-14619)
scaffold0202 (84-183)||(14238-14337)
[»] scaffold0022 (2 HSPs)
scaffold0022 (67-188)||(120465-120584)
scaffold0022 (84-196)||(120195-120301)
[»] scaffold0009 (2 HSPs)
scaffold0009 (86-188)||(262441-262543)
scaffold0009 (68-187)||(261000-261119)
[»] scaffold0182 (2 HSPs)
scaffold0182 (84-187)||(14375-14478)
scaffold0182 (84-198)||(13122-13236)
[»] scaffold0018 (1 HSPs)
scaffold0018 (84-186)||(73109-73211)
[»] scaffold0347 (1 HSPs)
scaffold0347 (86-186)||(13609-13709)


Alignment Details
Target: chr6 (Bit Score: 124; Significance: 9e-64; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 8 - 187
Target Start/End: Original strand, 13480413 - 13480593
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||    
T  13480413 aatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgtaggg 13480512  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
     |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  13480513 gcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaaggacgaaagacatatttaagcct 13480593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 5064521 - 5064334
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||||| ||||||||||| ||||||||||       ||||||||||||||||||||||||||||||||||    
T  5064521 ctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagtccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatt 5064422  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
    ||||||| || ||||| ||||||||||| |||||||||||||||| ||||||| |||||||||| |||||||| ||||||||||||||    
T  5064421 tgcaggggcaaattgggaggattagtaacttcagggacgaaaattcaaatgacttatatttacagggacgaaagacatatttaagcct 5064334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 23291949 - 23292128
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||| |||||||||||| ||| |||||        |||||||||| |||||||||||||||||||||||||||||    
T  23291949 aatcatcacttgccacatgggcaccacgtcgctaatgacagctcacttcagcaaaaaaacctaattaggatcaaaagtcaaatgattaatatttgcaggg 23292048  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    | ||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||||||| |||||||||||||    
T  23292049 atagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaagacatatttaagcc 23292128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 8 - 188
Target Start/End: Original strand, 15819694 - 15819876
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnn-tctaattaggaccaaaagtcaaatgattaatatttgcagg 105  Q
    |||||||||||||||||||| | | |||| ||||||||||||||||||||||        ||||||||||||||||||||||||||||| |||||||| |    
T  15819694 aatcatcacttgccacatgggcactacgtcgctaatgacagcccacctcagcaaaaaaaatctaattaggaccaaaagtcaaatgattagtatttgcaag 15819793  T
Q  106 gacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    |  ||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||||||| |||||||||||||||    
T  15819794 ggtagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcctt 15819876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 3 - 186
Target Start/End: Complemental strand, 21880548 - 21880364
Alignment:
Q  3 cgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttg 101  Q
    |||| |||||||||||||||||||| | |||||| | ||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||    
T  21880548 cgcccaatcatcacttgccacatgggcaccacgtcggtaatgacagcccacctcagcaaaaaaacctaattagtaccaaaagtcaaatgattaatatttg 21880449  T
Q  102 cagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||| ||||||| |||||||||||| ||||| |||||||||| ||||||| |||||||||| | |||||| |||||||||||||    
T  21880448 caggggcagattgaaaggattagtaacttcagagacgaaaattcaaatgacttatatttacaggaacgaaagacatatttaagcc 21880364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 8 - 188
Target Start/End: Original strand, 22494085 - 22494265
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | ||| || ||||||||||| ||||||||||        | ||||||||||||||||||||||||| ||||||||||||    
T  22494085 aatcatcacttgccacatgggcaccatgttgctaatgacagtccacctcagcaaaaaaacccaattaggaccaaaagtcaaatgattgatatttgcaggg 22494184  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
     |||||||||||||||||||| |||| ||||||||||| ||||||||||||||| || |||| |||||||||||||||||||    
T  22494185 gcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggac-aaaaacatatttaagcctt 22494265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 13480326 - 13480207
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||| ||||||||| || |||    
T  13480326 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcaggga 13480227  T
Q  168 cgaaaaacatatttaagcct 187  Q
    ||||| ||||||||||||||    
T  13480226 cgaaagacatatttaagcct 13480207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 8 - 188
Target Start/End: Original strand, 32337769 - 32337952
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnn---tctaattaggaccaaaagtcaaatgattaatatttgca 103  Q
    |||||||||||||||||||| | |||| | ||||||||||||||||||||||          |||||||||||| |||||||||||||||||||||||||    
T  32337769 aatcatcacttgccacatgggcaccacattgctaatgacagcccacctcagcaaaaaaaaaatctaattaggacgaaaagtcaaatgattaatatttgca 32337868  T
Q  104 gggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||| || ||||||||||| ||||| |||||||||||||||| ||||||||||||||| | ||||||||| |||||||||||||||    
T  32337869 ggggcatattggaaggatcagtaacttcagggacgaaaattcaaatgacctatatttgc-aggacgaaagacatatttaagcctt 32337952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 737963 - 738081
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||| |||| ||||||||||| ||||||||||||||| || |||    
T  737963 taattaggaccaaaagtcaaatgattaatacttgaaggggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcaggga 738062  T
Q  168 cgaaaaacatatttaagcc 186  Q
    ||||| |||||||||||||    
T  738063 cgaaagacatatttaagcc 738081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 23291862 - 23291745
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| ||||| |||||||||  | |||    
T  23291862 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatggcctatatttgtaggga 23291763  T
Q  168 cgaaaaacatatttaagc 185  Q
    ||||| ||||||||||||    
T  23291762 cgaaagacatatttaagc 23291745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 20561046 - 20560926
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| || ||||| ||| | |||||||||||||| ||||||||||||||| || |||    
T  20561046 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaatgattaataactacagggacgaaaattcaaatgacctatatttgcaggga 20560947  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| |||||||||||||||    
T  20560946 cgaaagacatatttaagcctt 20560926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 183
Target Start/End: Original strand, 5064601 - 5064716
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||| ||||| ||||||||| ||  ||    
T  5064601 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacctcagggacgaaaattcaaatggcctatatttgcagaga 5064700  T
Q  168 cgaaaaacatatttaa 183  Q
    ||||| ||||||||||    
T  5064701 cgaaagacatatttaa 5064716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 39 - 186
Target Start/End: Complemental strand, 20994965 - 20994819
Alignment:
Q  39 taatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacg 138  Q
    ||||||||||||||||||||        ||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||| ||||    
T  20994965 taatgacagcccacctcagcaaaaaaacctaattatgaccaaaagttaaatgattaatatttgcaggg-cagattagaaggattagtaacttcagagacg 20994867  T
Q  139 aaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    |||||| |||||| ||||||||||| |||||||| |||||||||||||    
T  20994866 aaaattcaaatgaactatatttacagggacgaaagacatatttaagcc 20994819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 26503621 - 26503740
Alignment:
Q  69 aattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggac 168  Q
    |||||||||||||||||||||||||||||||||||| | | |||||||||||||| ||| |||| ||||||||||| ||||||| ||||||| || ||||    
T  26503621 aattaggaccaaaagtcaaatgattaatatttgcagtggcggattggaaggattaataacttcatggacgaaaattcaaatgacttatatttgcagggac 26503720  T
Q  169 gaaaaacatatttaagcctt 188  Q
    ||||||| ||||||||||||    
T  26503721 gaaaaacctatttaagcctt 26503740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 78 - 187
Target Start/End: Original strand, 30234868 - 30234977
Alignment:
Q  78 caaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacat 177  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| |||  |||||||||| || |||||||| ||||    
T  30234868 caaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaacaacctatatttgcagggacgaaagacat 30234967  T
Q  178 atttaagcct 187  Q
    ||||||||||    
T  30234968 atttaagcct 30234977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 32337682 - 32337561
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||| |||||  |||||||| || |||    
T  32337682 taattaggcccaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggtctatatttgcaggga 32337583  T
Q  168 cgaaaaacatatttaagccttg 189  Q
    ||||| || ||||||| |||||    
T  32337582 cgaaagacctatttaaaccttg 32337561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 183
Target Start/End: Original strand, 20561193 - 20561307
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||  ||| ||||||||||| ||||||| ||||||||||| ||    
T  20561193 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattaataacatcaaggacgaaaattcaaatgacatatatttacaa-ga 20561291  T
Q  168 cgaaaaacatatttaa 183  Q
    ||||| || |||||||    
T  20561292 cgaaagacctatttaa 20561307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 7612745 - 7612931
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnnt--ctaattaggaccaaaagtcaaatgattaata 97  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||          ||||||| |||||||||||||||||||||      
T  7612745 ctcgcccaatcatcacttgccacatggacaccacgtcgctaatgacagcccacctcagcaaaaaaaaacctaattatgaccaaaagtcaaatgattaaat 7612844  T
Q  98 tttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
    ||||||| | |||||||||| |||| |||| |||||||||||||||| ||||  | |||||||||| | |||||| || ||||||||    
T  7612845 tttgcagtggcagattggaaagattggtaatttcagggacgaaaattcaaatagcttatatttacaggcacgaaagacctatttaag 7612931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 21880630 - 21880748
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||  | |||||||  | |||    
T  21880630 taattaggaccaaaagtcaaatgcttaatatttgcagggatagattggaaggattagtaacttcagggacgaaaattcaaattgcatatatttggaggga 21880729  T
Q  168 cgaaaaacatatttaagcc 186  Q
    ||||| || ||||||||||    
T  21880730 cgaaagacctatttaagcc 21880748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 1066325 - 1066143
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntc-taattaggaccaaaagtcaaatgattaatat 98  Q
    |||||| |||||||||||||||||||| | ||| || ||||||||||||||||||||||        | ||||||||||||||| |||||| |||||  |    
T  1066325 ctcgcccaatcatcacttgccacatgggcaccatgtcgctaatgacagcccacctcagcaaaaaaaacctaattaggaccaaaattcaaattattaaatt 1066226  T
Q  99 ttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattt 181  Q
    |||||| ||||||||| |||||||| ||| || | ||||||||||| ||||||||||||||||||||||| ||| || |||||    
T  1066225 ttgcagtgacagattgaaaggattaataactttaaggacgaaaattcaaatgacctatatttacaaggacaaaagacttattt 1066143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 20994965 - 20995075
Alignment:
Q  76 accaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaac 175  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| ||||||| | ||||| ||  ||||||| ||    
T  20994965 accaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacttctatttgcagagacgaaagac 20995064  T
Q  176 atatttaagcc 186  Q
     ||||||||||    
T  20995065 ctatttaagcc 20995075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 185
Target Start/End: Original strand, 26542822 - 26543003
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnn---tctaattaggaccaaaagtcaaatgattaatatttgca 103  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||     
T  26542822 aatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgcg 26542921  T
Q  104 gggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    | | | ||||| ||  |||||||| ||||| |||||||| | ||||||||||||||| || |||||||| || || ||||||    
T  26542922 gtggccgattgaaattattagtaacttcagagacgaaaactcaaatgacctatatttgcagggacgaaagacctaattaagc 26543003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 3299841 - 3299942
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  | |||||||||||||||||||| |||| ||||||||||| ||||||||||||||| || |||||||| ||||||||||    
T  3299841 tcaaatgattaatatttgcaatggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaatacatatttaa 3299940  T
Q  184 gc 185  Q
    ||    
T  3299941 gc 3299942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 160
Target Start/End: Complemental strand, 22493998 - 22493907
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    |||||||||||||||||||||||||||||||||||||||  |||||| || ||||||||| |||||||||||||||| |||||||||||||||    
T  22493998 taattaggaccaaaagtcaaatgattaatatttgcaggg-tagattgaaaagattagtaacttcagggacgaaaattcaaatgacctatattt 22493907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 187
Target Start/End: Complemental strand, 3299738 - 3299558
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||| ||||||| | |||||| |||||||||||||||||||  |        |||||||||| ||||||| ||||||||||||||||||  |    
T  3299738 aatcatcacttgtcacatgggcaccacgttgctaatgacagcccacctcgacaaaaaaacctaattaggatcaaaagtgaaatgattaatatttgcaatg 3299639  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
     || ||||||| ||||||||| |||| ||||||||||| ||||||| ||||||| ||  ||||||| || |||||||||||    
T  3299638 gcaaattggaatgattagtaacttcatggacgaaaattcaaatgacttatatttgcagagacgaaagacctatttaagcct 3299558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 3586397 - 3586211
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| ||||||||||| |||||||| | |||||| ||||||||||| |||||| |||        ||||||| ||||| |||||||||||||||  ||    
T  3586397 ctcgcctaatcatcacttaccacatgggcaccacgtcgctaatgacagtccaccttagcgaaaaaacctaattaagaccagaagtcaaatgattaaattt 3586298  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
    ||||| | |||||| |||||||||| || || || |||||||||| ||||||||||||||| | ||||||||| || |||||||||||    
T  3586297 tgcagtggcagatttgaaggattagcaactttagagacgaaaattcaaatgacctatatttgc-aggacgaaagacctatttaagcct 3586211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 9607592 - 9607686
Alignment:
Q  78 caaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaa 172  Q
    ||||||||||||||||||||||||||||| || ||| ||||||||||||| |||| ||||||||||| ||||||||||||||| || ||||||||    
T  9607592 caaaagtcaaatgattaatatttgcaggggcatattagaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaa 9607686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 188
Target Start/End: Original strand, 20774316 - 20774467
Alignment:
Q  37 gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcaggga 136  Q
    ||||||||||||||| ||||||       |||||||| |||||||||||||||||||||  ||||||| | ||||||| ||| |||||||| ||||| ||    
T  20774316 gctaatgacagcccaactcagcataaaaatctaattatgaccaaaagtcaaatgattaaattttgcagtggcagattgaaagaattagtaacttcagaga 20774415  T
Q  137 cgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    |||||||  ||||||||||||||| ||  ||||||| || ||||||||||||    
T  20774416 cgaaaatacaaatgacctatatttgcagagacgaaagacctatttaagcctt 20774467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 31879655 - 31879844
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnnt-ctaattaggaccaaaagtcaaatgattaatat 98  Q
    |||||| |||||||||||| ||||||| | |||||  ||||||||||||||||||||||         ||||||| |||||||||||||||||||||  |    
T  31879655 ctcgcccaatcatcacttggcacatgggcaccacgccgctaatgacagcccacctcagcaaaaaaaagctaattatgaccaaaagtcaaatgattaaatt 31879754  T
Q  99 ttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||||  |||||||||||  |||||||| |||||||| | ||||| |||||||||||||||  | |||||||| || |||| |||||||    
T  31879755 ttgcagtaacagattggaattattagtaacttcagggatgcaaattcaaatgacctatatttgtagggacgaaagacctattgaagcctt 31879844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 8427316 - 8427200
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacg 169  Q
    |||||||  |||| |||| |||||||||||||||||| || | ||| ||||||||||| || || |||||||||| ||||||||||||||| |||||| |    
T  8427316 attaggatgaaaattcaactgattaatatttgcaggggcaaaatgggaggattagtaacttgagagacgaaaattcaaatgacctatatttgcaaggatg 8427217  T
Q  170 aaaaacatatttaagcc 186  Q
    ||| |||||||||||||    
T  8427216 aaagacatatttaagcc 8427200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 196
Target Start/End: Complemental strand, 7612650 - 7612538
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  |||| | || ||| |||||||| |||||||||||||||| |||||  |||||||| || |||||||| || |||||||    
T  7612650 tcaaatgattaatatttgcaatgacaaaatgaaagaattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaa 7612551  T
Q  184 gccttgattaaat 196  Q
    |||| ||| ||||    
T  7612550 gcctagataaaat 7612538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 16704615 - 16704695
Alignment:
Q  108 cagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    |||||||||||||||||||| |||| ||||||||||| ||||| ||||||||| || |||||||| || ||||||||||||    
T  16704615 cagattggaaggattagtaacttcaaggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagcctt 16704695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 19296509 - 19296613
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||| |  ||||||| |  |||||||| |||||| ||||||||| ||||||| ||||||| ||||||||||| || |||||||    
T  19296509 tcaaatgattaatatttgcagtggtagattggcaaaattagtaacttcaggaacgaaaattcaaatgacatatatttgcaaggacgaaagacctatttaa 19296608  T
Q  184 gcctt 188  Q
     ||||    
T  19296609 acctt 19296613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 26542719 - 26542612
Alignment:
Q  84 tcaaatgattaa-tatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatt--tacaaggacgaaaaacatatt 180  Q
    |||||||||||| ||||||||| | ||||||| || ||||||||| |||||||||||||||| ||||||| ||||||  || | ||||||||||| ||||    
T  26542719 tcaaatgattaaatatttgcagtggcagattgaaatgattagtaacttcagggacgaaaattcaaatgacatatatttgtaaagggacgaaaaacctatt 26542620  T
Q  181 taagcctt 188  Q
    ||||||||    
T  26542619 taagcctt 26542612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 1066421 - 1066522
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  | || | |||||  |||||||| |||||||||||||||| |||||| |||||||||||| || ||||||| |||||||    
T  1066421 tcaaatgattaatatttgcaatggcaaaatggaaatattagtaacttcagggacgaaaattcaaatgatctatatttacaa-gatgaaaaacctatttaa 1066519  T
Q  184 gcc 186  Q
    |||    
T  1066520 gcc 1066522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 17784385 - 17784487
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||||||||||||||| || | ||| |||||||||||||||| ||| ||||| | ||||| |||||  || || ||| ||||| |||||||||||    
T  17784385 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcatggatgaaaaatcaaatggcctatcattgcagggatgaaaagcatatttaagc 17784484  T
Q  186 ctt 188  Q
    |||    
T  17784485 ctt 17784487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 33400068 - 33399966
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||||||| ||||| | ||| | |||||| ||||| ||| ||||| |||||||||    
T  33400068 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 33399969  T
Q  184 gcc 186  Q
    |||    
T  33399968 gcc 33399966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 13480333 - 13480398
Alignment:
Q  120 attagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    |||||||| |||||||||||||||| ||||||||||||||| || ||| ||||||| |||||||||    
T  13480333 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaaaacctatttaagc 13480398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 70 - 187
Target Start/End: Complemental strand, 22540116 - 22539999
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacg 169  Q
    ||||| ||||||| ||||||||||  || ||| ||||| || ||| ||||||||||||||  || |||||||| |||| |||  | |||||||||||||     
T  22540116 attagaaccaaaattcaaatgattggtaattgtagggaaagtttgaaaggattagtaagtatagcgacgaaaacttaactgagatctatttacaaggact 22540017  T
Q  170 aaaaacatatttaagcct 187  Q
    ||| ||||||||||||||    
T  22540016 aaacacatatttaagcct 22539999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 4116901 - 4116797
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||  ||| ||||| || | ||| |||||||||||| ||||||| ||||| | ||| | |||||| ||||| ||| |||||||||||||||    
T  4116901 tcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaacggcctataattacagggatgaaaaacatatttaa 4116802  T
Q  184 gcctt 188  Q
    |||||    
T  4116801 gcctt 4116797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 4117545 - 4117649
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||  ||| ||||| || | ||| |||||||||||| ||||||| ||||| | ||| | |||||| ||||| ||| |||||||||||||||    
T  4117545 tcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaacggcctataattacagggatgaaaaacatatttaa 4117644  T
Q  184 gcctt 188  Q
    |||||    
T  4117645 gcctt 4117649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 16706957 - 16707037
Alignment:
Q  108 cagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    |||||||||| ||||||||| |||| ||||||||||| ||||||||||||||| || |||| ||| || || |||||||||    
T  16706957 cagattggaatgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggaccaaagacctaattaagcctt 16707037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 31393380 - 31393553
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaa-ttaggaccaaaagtcaaatgattaatat 98  Q
    |||||| |||||||||||||||||||  ||||| || ||||||||||||||||||||||          || |||||||||||||||||||||||||  |    
T  31393380 ctcgcccaatcatcacttgccacatgagcgccatgtcgctaatgacagcccacctcagcaaaaaaaaaaaaattaggaccaaaagtcaaatgattaaatt 31393479  T
Q  99 ttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaa 172  Q
    |||| | | || |||||||| |||||||| |||| | | ||||||| |||| | |||| ||| || ||||||||    
T  31393480 ttgcggtggcatattggaagaattagtaacttcatgaatgaaaattgaaataagctatgtttgcagggacgaaa 31393553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 20774191 - 20774092
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  |||| | || |||||||| ||| |||| ||||||||||| ||||||| |||||||  ||||| |||| || |||||||    
T  20774191 tcaaatgattaatatttgcaatgacaaaatgaaaggattaataacttcaaggacgaaaattcaaatgacatatatttgtaaggatgaaagacctatttaa 20774092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 20561187 - 20561121
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||| ||||||||||| ||||||||||||||| || ||| |||| ||||||||||||    
T  20561187 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggatgaaagacatatttaagc 20561121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 23291868 - 23291934
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  23291868 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 23291934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 31879591 - 31879648
Alignment:
Q  129 ttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||| || ||||||||||    
T  31879591 ttcagggacgaaaattcaaatgacctatatttccaaagacgaaagacctatttaagcc 31879648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 1066399 - 1066332
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| ||  |||| ||||||| ||||||||||||||| |||||||||||||| | ||||||||    
T  1066399 gattagtaacttttgggatgaaaattcaaatgacctatatttgcaaggacgaaaaacctttttaagcc 1066332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 183
Target Start/End: Original strand, 1661428 - 1661527
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || |||||  | | |||||||||||||||||||||||| ||||| | ||| | |||||| ||||| ||| ||||| |||||||||    
T  1661428 tcaaatgattagtaattacaggggtaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaatcatatttaa 1661527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 3586471 - 3586404
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| || ||||||||||||| |||||||||||||||  | |||||||| || ||||||||||    
T  3586471 gattagtaactttagggacgaaaattcaaatgacctatatttgtagggacgaaagacctatttaagcc 3586404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 31386901 - 31386798
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||    || | |||||||||||| || |||| ||||||| ||| ||||  |||||||||||| ||| |||| || |||||||    
T  31386901 tcaaatgattaatatttgcaattgcaaaatggaaggattagcaacttcaaggacgaatattcaaatatcctatatttacagggatgaaacacctatttaa 31386802  T
Q  184 gcct 187  Q
    ||||    
T  31386801 gcct 31386798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 31879559 - 31879461
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||| |||||||||||||  | || | ||||| ||||||||| ||| |||||||||||| |||||||| |||||| || |||||||| || |||||||    
T  31879559 tcaaattattaatatttgcaatggcaaaatggaaagattagtaacttcggggacgaaaattcaaatgacc-atatttgcagggacgaaagacctatttaa 31879461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 33401124 - 33401227
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||  ||| ||||| || | ||| |||||||||||||||||||| ||||| | ||| | |||||| || || ||| ||||| |||||||||    
T  33401124 tcaaatgattaacttttacaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaacggcctataattgcagggatgaaaagcatatttaa 33401223  T
Q  184 gcct 187  Q
    ||||    
T  33401224 gcct 33401227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 190
Target Start/End: Original strand, 14657207 - 14657313
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||||||||| |||||||  |||| | ||| | |||||| ||| | ||| ||||| |||||||||    
T  14657207 tcaaatgattagtaattacaggggcaaaatggaaggattagtaaggtcagggataaaaaatcaaacggcctataattatagggatgaaaagcatatttaa 14657306  T
Q  184 gccttga 190  Q
    |||||||    
T  14657307 gccttga 14657313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 21544584 - 21544518
Alignment:
Q  120 attagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    |||||||| ||||| |||||||||| ||||||||||||||| || |||||||| |  ||||||||||    
T  21544584 attagtaacttcagagacgaaaattcaaatgacctatatttgcagggacgaaagatctatttaagcc 21544518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 32337688 - 32337754
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| ||||| |||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  32337688 gattagtaacttcagagacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 32337754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 7612672 - 7612737
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
    ||||||||| | |||||||||||||| ||||||| ||||||| || |||||||| || ||||||||    
T  7612672 gattagtaattccagggacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaag 7612737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 21880624 - 21880583
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  21880624 gattagtaacttcagggacgaaaattcaaatgacctatattt 21880583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 22494004 - 22494069
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
    ||||||||| |||||||||||||||| |||| |||||||||| || ||| |||| || ||||||||    
T  22494004 gattagtaacttcagggacgaaaattcaaataacctatatttgcagggatgaaagacttatttaag 22494069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 26503488 - 26503529
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  26503488 gattagtaacttcagggacgaaaattcaaatgacctatattt 26503529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 5064594 - 5064530
Alignment:
Q  120 attagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
    |||||||| |||||||||||||||| |||||| |||||||| || ||| |||| || ||||||||    
T  5064594 attagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagacctatttaag 5064530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 8427373 - 8427436
Alignment:
Q  94 aatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctata 157  Q
    ||||||||||||| || | ||| ||||||||||||| |||||| ||||| | ||||||||||||    
T  8427373 aatatttgcaggggcaaaatgggaggattagtaagtccagggatgaaaaatcaaatgacctata 8427436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 15819643 - 15819604
Alignment:
Q  111 attggaaggattagtaagttcagggacgaaaatttaaatg 150  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  15819643 attggaaggattagtaacttcagggacgaaaattcaaatg 15819604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 26542741 - 26542808
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| |||||||||||||||| |||||| |||||||| ||   |||||| || ||||||||||    
T  26542741 gattagtaacttcagggacgaaaattcaaatgatctatatttgcagatacgaaagacctatttaagcc 26542808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 737957 - 737904
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaa 172  Q
    ||||||||| |||||| | ||||||| ||||||||||||||| || ||||||||    
T  737957 gattagtaacttcaggaatgaaaattcaaatgacctatatttgcagggacgaaa 737904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 18865216 - 18865119
Alignment:
Q  90 gattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
    ||||||||||||||| | ||  |||||||||||||||| || |  |||||||||| ||||||| | |||||  | |||| ||| || |||||||||||    
T  18865216 gattaatatttgcagtggcaatttggaaggattagtaactttatagacgaaaattcaaatgacttgtatttgtagggactaaagacctatttaagcct 18865119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 19296487 - 19296418
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||||||| |||| ||| ||||||| ||||||||||||||| || |||||| | || ||||||| ||||    
T  19296487 gattagtaacttcatggatgaaaattcaaatgacctatatttgcagggacgatagacctatttaaacctt 19296418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 31386925 - 31386989
Alignment:
Q  121 ttagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||| |||||| | ||||||| ||||||||||||||| ||||||| ||| || ||||||||||    
T  31386925 ttagtaacttcagg-atgaaaattcaaatgacctatatttgcaaggacaaaagacctatttaagcc 31386989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 6e-62; HSPs: 75)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 8 - 188
Target Start/End: Complemental strand, 16367142 - 16366961
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||  | |||||| ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||    
T  16367142 aatcatcacttgccacatgtgcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgcaggg 16367043  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
     |||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  16367042 gcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagcctt 16366961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 20911328 - 20911513
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||||| ||||||||||||||| ||||||       |||||||| |||||||||||||||||||||||||    
T  20911328 ctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccatctcagcaaaaaaatctaattatgaccaaaagtcaaatgattaatatt 20911427  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    |||||| ||||||||||| ||||||||| ||||||||| |||||| |||||||||||||||||| |||||||| |||||||||||||    
T  20911428 tgcagg-acagattggaatgattagtaacttcagggacaaaaattcaaatgacctatatttacagggacgaaagacatatttaagcc 20911513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 8 - 188
Target Start/End: Original strand, 32519360 - 32519541
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||    
T  32519360 aatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaggg 32519459  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
     ||||||| |||||||||||| |||||| ||||||||| ||||||| ||||||| || |||||||| |||||||||||||||    
T  32519460 gcagattgaaaggattagtaacttcaggaacgaaaattcaaatgacttatatttgcagggacgaaagacatatttaagcctt 32519541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 2 - 188
Target Start/End: Original strand, 1150136 - 1150323
Alignment:
Q  2 tcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatattt 100  Q
    ||||| |||||||||||||||||||| | |||||| |||||||  || |||||||| |       |||||||||||||||||||||||||||||||||||    
T  1150136 tcgcccaatcatcacttgccacatgggcaccacgtcgctaatggaagtccacctcaacaaaaaaatctaattaggaccaaaagtcaaatgattaatattt 1150235  T
Q  101 gcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    |||||| ||||||| |||||||||||| |||||||||||||||| ||||||||||||||| || | |||||| |||||||||||||||    
T  1150236 gcaggggcagattgaaaggattagtaatttcagggacgaaaattcaaatgacctatatttgcaggcacgaaagacatatttaagcctt 1150323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 8 - 192
Target Start/End: Complemental strand, 19607097 - 19606911
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntct-aattaggaccaaaagtcaaatgattaatatttgcagg 105  Q
    ||||||||||||||| |||| | |||||| ||||||||||||||||||| ||        || |||||||||||||||||||||||||||||||||||      
T  19607097 aatcatcacttgccatatgggcaccacgtcgctaatgacagcccacctcggcaaaaaaaacttaattaggaccaaaagtcaaatgattaatatttgcaac 19606998  T
Q  106 gacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagccttgatt 192  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||| |||||||| |||||||||| | ||||||    
T  19606997 gacagattggaaggattagtaacttcagggacgaaaattcaaatgacatatatttacagggacgaaagacatatttaaactttgatt 19606911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 1150055 - 1149935
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||    
T  1150055 taattaggaccaaaagtcaaatgattaatatttgcaggggccgattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaggga 1149956  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| || ||||||||||||    
T  1149955 cgaaatacctatttaagcctt 1149935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 20911248 - 20911128
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||    
T  20911248 taattatgaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaggga 20911149  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| || ||||||||||||    
T  20911148 cgaaagacctatttaagcctt 20911128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 8089661 - 8089831
Alignment:
Q  12 atcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntc-taattaggaccaaaagtcaaatgattaatatttgcagggaca 109  Q
    |||||||||||||||||| |||||| ||||||||||| ||||||||||        | ||||||||||||||||||||||||||||||||||   || ||    
T  8089661 atcacttgccacatggacaccacgtcgctaatgacagtccacctcagcaaaaaaaacctaattaggaccaaaagtcaaatgattaatatttg---gggca 8089757  T
Q  110 gattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||||||||||||||| ||||||||| |||||  |||||||||||||||||||| |||||| ||||||||||    
T  8089758 gattggaaggattagtaacttcagggacaaaaatgcaaatgacctatatttacaagaacgaaagacatatttaa 8089831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 32519273 - 32519155
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||| ||||||||||||||||||||||||||||||  || ||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||    
T  32519273 taattagaaccaaaagtcaaatgattaatatttgcaggagcatattggaaggattagtaatttcagggacgaaaattcaaatgacctatatttgcaggga 32519174  T
Q  168 cgaaaaacatatttaagcc 186  Q
    ||||| |||||||||||||    
T  32519173 cgaaagacatatttaagcc 32519155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 45663774 - 45663892
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||| ||||   ||||||||||| |||    
T  45663774 taattaggaccaaaagtcaaatgattaatatttgcagggccagatttgaaggattagtaacttcagggacgaaaattcaaattgactatatttacaggga 45663873  T
Q  168 cgaaaaacatatttaagcc 186  Q
    ||||| |||||||||||||    
T  45663874 cgaaagacatatttaagcc 45663892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 22731798 - 22731919
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||| ||||||||||| ||||| ||||||||| || |||    
T  22731798 taataaggaccaaaagtcaaatgattaatatttgcagggacagattgaaaggaatagtaacttcacggacgaaaattcaaatggcctatatttgcaggga 22731897  T
Q  168 cgaaaaacatatttaagccttg 189  Q
    ||||| ||||||||||||||||    
T  22731898 cgaaagacatatttaagccttg 22731919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 9693928 - 9693768
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||| | | |||||| ||||||||||||||||||||||        |||||||||||||||||||||||||||||  ||    
T  9693928 ctcgcccaatcatcacttgccacataggcaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaaactt 9693829  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||| | |||||||||||||||||||| ||||| |||||||||| ||||| |||||||||    
T  9693828 tgcagtggcagattggaaggattagtaacttcagtgacgaaaattaaaatggcctatattt 9693768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 22309617 - 22309429
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | | | || ||||||||||||||||||||||        |||| || ||||||||||||||||||||||||     
T  22309617 ctcgcccaatcatcacttgccacatgggcacgatgtcgctaatgacagcccacctcagcaaaaaaacctaaatatgaccaaaagtcaaatgattaatatg 22309518  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||| | |||||||||||||||||||| ||||  ||| |||||| ||||||||||||||| || |||||||| || ||||||||||||    
T  22309517 tgcagtggcagattggaaggattagtaacttcattgactaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcctt 22309429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 28599632 - 28599811
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||| ||| ||||||||||| ||||||       ||||||||||||||||||||||||||||||  ||||||  |    
T  28599632 aatcatcacttgccacatgggcaccacgtcgctcatgacagcccatctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaaattttgcaatg 28599731  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
     ||||||||||||||| |||| ||||| |||||||||| ||||||| |||||||||| ||| |||| || ||||||||||    
T  28599732 gcagattggaaggatttgtaacttcagagacgaaaattcaaatgacttatatttacagggatgaaagacctatttaagcc 28599811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 16367229 - 16367338
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||| ||||| ||||||||| || |||    
T  16367229 taattaggaccaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcaggga 16367328  T
Q  168 cgaaaaacat 177  Q
    ||||| ||||    
T  16367329 cgaaagacat 16367338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 17284933 - 17285119
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    ||||||||||||||||||||||||||  | |||||| ||||||||||||||||||||||       ||||||||||||||||||| ||||||||||  ||    
T  17284933 ctcgccaaatcatcacttgccacatgtgcaccacgtcgctaatgacagcccacctcagccaaaaaatctaattaggaccaaaagttaaatgattaaattt 17285032  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||  | |||| ||||||||||||||||| ||||  |||||||||| |||||||||| |||| || |||||||| |  ||||||||||    
T  17285033 tgttgtgacatattggaaggattagtaacttcattgacgaaaattcaaatgacctaaattttcagggacgaaagatctatttaagcc 17285119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 67 - 187
Target Start/End: Original strand, 4375816 - 4375936
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    |||||||||||||||||||||||||||||  ||||||| | |||||||||||||||||||| |||| ||||||||||||||||||| ||||||| || ||    
T  4375816 ctaattaggaccaaaagtcaaatgattaaattttgcagtggcagattggaaggattagtaacttcatggacgaaaatttaaatgacatatatttgcatgg 4375915  T
Q  167 acgaaaaacatatttaagcct 187  Q
    |||||| || |||||||||||    
T  4375916 acgaaagacctatttaagcct 4375936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 17580526 - 17580711
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||||| |||||||||| |||||||||||        |||||||||||||||||||||    ||||||||    
T  17580526 ctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacaacccacctcagcaaaaaaacctaattaggaccaaaagtcaa----ttaatatt 17580621  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacg-aaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||| | || ||||||||||||||||| || ||||||| |||||| |||||||||||||||  | |||||||| |||||||||||||||    
T  17580622 tgcagtggcatattggaaggattagtaactttagggacgaaaaattcaaatgacctatatttgtagggacgaaagacatatttaagcctt 17580711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 86 - 186
Target Start/End: Complemental strand, 10446932 - 10446832
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||| ||||||||| || |||||||| ||||||||||||    
T  10446932 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagc 10446833  T
Q  186 c 186  Q
    |    
T  10446832 c 10446832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 183
Target Start/End: Complemental strand, 8089570 - 8089455
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||  |||||||||| ||||||| ||||||| ||  ||    
T  8089570 taattaggaccaaaagtcaaatgattgatatttgcaggggcagattggaaggattagtaacttcaaagacgaaaattcaaatgacatatatttgcagaga 8089471  T
Q  168 cgaaaaacatatttaa 183  Q
    |||||||| |||||||    
T  8089470 cgaaaaacctatttaa 8089455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 41846578 - 41846391
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||| |||| | | |        ||||||| ||  |||||||||||||||||||||    
T  41846578 ctcgccaaatcatcacttgccacatgggcaccacgtcgctaatgacagtccactttaacaaaaaaacctaattatgattaaaagtcaaatgattaatatt 41846479  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
    ||||| | |||||| ||||||||| ||| |||||||||||||||| |||||||||||||||  | |||||||| |  |||||||||||    
T  41846478 tgcagtggcagattagaaggattactaacttcagggacgaaaattcaaatgacctatatttgtagggacgaaagatctatttaagcct 41846391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 8 - 172
Target Start/End: Complemental strand, 18477086 - 18476921
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    ||||||||||| |||||||| | ||| || | ||||||||||||||||||||        |||||||||| ||||||||||||||||||  ||||||| |    
T  18477086 aatcatcacttaccacatgggcaccatgtcgttaatgacagcccacctcagcaaaaaaacctaattaggatcaaaagtcaaatgattaaattttgcagtg 18476987  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaa 172  Q
     |||||||||||||||||||| ||||||||| |||||| |||||||||||| || || ||||||||    
T  18476986 gcagattggaaggattagtaacttcagggacaaaaattcaaatgacctatagttgcagggacgaaa 18476921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 8 - 188
Target Start/End: Original strand, 37984932 - 37985113
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    ||||||||||||||||||||   |||||| ||||||||||||||||||||||        ||||||| || ||||||||||||||||||  ||||||| |    
T  37984932 aatcatcacttgccacatgggtaccacgttgctaatgacagcccacctcagcaaaaaaacctaattaagatcaaaagtcaaatgattaaattttgcagtg 37985031  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
     || ||||||||||||||||| ||||| |||||||| | ||||||| ||||||| || |||||||| || ||||| ||||||    
T  37985032 gcaaattggaaggattagtaatttcagagacgaaaaatcaaatgacatatatttgcagggacgaaatacttattttagcctt 37985113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 17366820 - 17366964
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||| || |||| | |||||| |||||||||| |||||||||||        ||||||||||||||||||||| |||||||||||    
T  17366820 ctcgcccaatcatcacttgtcatatgggcaccacgtcgctaatgacaacccacctcagcaaaaaaacctaattaggaccaaaagtcaattgattaatatt 17366919  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatt 144  Q
    ||||| | |||||||||||||||||||| || |||||||||||||    
T  17366920 tgcagtggcagattggaaggattagtaactttagggacgaaaatt 17366964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 9694024 - 9694127
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  |||| | ||||||||||||||| |||||||||||||||| ||||||||||||||| || |||||||| || |||||||    
T  9694024 tcaaatgattaatatttgcaatgacaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaagacctatttaa 9694123  T
Q  184 gcct 187  Q
    ||||    
T  9694124 gcct 9694127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 17580446 - 17580328
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||| ||||||||||||||||||||||||||||| || ||||||||||||| ||| ||| |||||||||||| ||||   |||||||||||  ||    
T  17580446 taattaggatcaaaagtcaaatgattaatatttgcaggggcaaattggaaggattaataacttcggggacgaaaattcaaatagtctatatttacagaga 17580347  T
Q  168 cgaaaaacatatttaagcc 186  Q
    ||||| || ||||||||||    
T  17580346 cgaaagacctatttaagcc 17580328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 22309713 - 22309816
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||| | ||||||||||  |||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || |||||||    
T  22309713 tcaaatgattaatatttgcagtgtcagattggaacaattagtaacttcagggacgaaaattcaaatgacctatatttgcagggaagaaagacctatttaa 22309812  T
Q  184 gcct 187  Q
    ||||    
T  22309813 gcct 22309816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 86 - 186
Target Start/End: Complemental strand, 17366726 - 17366626
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||||||||||||| | |||||||||||||||| ||| |||||||| ||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  17366726 aaatgattaatatttgcagtggcagattggaaggattattaaattcagggaagaaaattcaaatgacctatatttgcatggatgaaagacctatttaagc 17366627  T
Q  186 c 186  Q
    |    
T  17366626 c 17366626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 43681977 - 43681854
Alignment:
Q  66 tctaattaggaccaaaa-gtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaa 164  Q
    |||||||| |||||||| |||||||||||||||||||||  | || | ||||| ||||||||| || | ||||||||||| ||||||| ||||||| ||     
T  43681977 tctaattatgaccaaaaagtcaaatgattaatatttgcaatggcaaaatggaatgattagtaactttatggacgaaaattcaaatgacatatatttgcag 43681878  T
Q  165 ggacgaaaaacatatttaagcctt 188  Q
    |||||||| |||||||||||||||    
T  43681877 ggacgaaagacatatttaagcctt 43681854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 19620777 - 19620867
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    |||||||  |||| ||||||||||||||||||||||| || | |||||||||||||||||||||||| |||| || |||||||||||||||    
T  19620777 attaggatgaaaattcaaatgattaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatgacctatattt 19620867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 9959002 - 9958826
Alignment:
Q  10 tcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnnt-ctaattaggaccaaaagtcaaatgattaatatttgcaggga 107  Q
    ||||||||||| |||||| | |||||| ||||||||||||||||||||||         |||||||| |||||||||||| |||||||||||||||| |     
T  9959002 tcatcacttgcgacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaaactaattag-accaaaagtcaactgattaatatttgcagtgg 9958904  T
Q  108 cagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    | ||||||||| ||||| || ||||  |||||||||| |||||| |||||||| || ||||| ||||| ||||||||||    
T  9958903 ctgattggaagcattagcaacttcattgacgaaaattcaaatgatctatatttgcagggacg-aaaacctatttaagcc 9958826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 43236619 - 43236530
Alignment:
Q  71 ttaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    |||||||||||| ||||||||||||||||||||||||  | |||| |||||||||||||||||||| |||| || ||||| |||||||||    
T  43236619 ttaggaccaaaactcaaatgattaatatttgcagggaaggtttgggaggattagtaagttcagggatgaaatttcaaatggcctatattt 43236530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 28599529 - 28599430
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  | || | ||||||||||||||| |||| ||||||||||| |||||| |||||||| ||||||||||| || |||||||    
T  28599529 tcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcatggacgaaaattcaaatgatctatatttgcaaggacgaaagacctatttaa 28599430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 41846674 - 41846751
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatattta 161  Q
    ||||||||||||||||||||| | ||||||||||||| |||||| |||||| ||||||||| ||||| ||||||||||    
T  41846674 tcaaatgattaatatttgcagtggcagattggaaggagtagtaacttcaggaacgaaaattcaaatggcctatattta 41846751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 71 - 187
Target Start/End: Original strand, 43237705 - 43237821
Alignment:
Q  71 ttaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacga 170  Q
    |||||||||||| |||| |||||||||||||||||||  | |||| ||||||||||||||||||||  ||| || ||||| ||||||||| || |||| |    
T  43237705 ttaggaccaaaactcaagtgattaatatttgcagggaaggtttgggaggattagtaagttcagggataaaatttcaaatggcctatatttgcagggacaa 43237804  T
Q  171 aaaacatatttaagcct 187  Q
    ||  ||||||| |||||    
T  43237805 aatgcatattttagcct 43237821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 183
Target Start/End: Original strand, 9959107 - 9959206
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||||||||||||||| || | ||||||| |||||||||||| |||| |||| |||||| |||||||| |||||| || |||||||| || |||||||    
T  9959107 tcaaatgattaatatttgtagtggcagattgaaaggattagtaacttcatggaccaaaattcaaatgaccaatatttgcagggacgaaagacttatttaa 9959206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 17284816 - 17284741
Alignment:
Q  113 tggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||||||||||||| |||||  ||||||||| ||||||||||||||| || ||||||||||| ||||||||||||    
T  17284816 tggaaggattagtaacttcagatacgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaagcctt 17284741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 7981162 - 7981076
Alignment:
Q  71 ttaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctata 157  Q
    |||||||||||| |||| |||||||||||||||||||  | |||| ||||||||||||||| |||| |||| || ||||||||||||    
T  7981162 ttaggaccaaaactcaagtgattaatatttgcagggaaggtttgggaggattagtaagttcggggatgaaatttcaaatgacctata 7981076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 4375651 - 4375550
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||||||||||||||||   | || | ||||||||||| ||| ||||| || |||||||||| |||||||||||||||  |||||||||| |||||||    
T  4375651 tcaaatgattaatatttgctatggcaaaatggaaggattaataatttcagagatgaaaatttaattgacctatatttacatagacgaaaaacctatttaa 4375552  T
Q  184 gc 185  Q
    ||    
T  4375551 gc 4375550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 20982626 - 20982522
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||||||| ||||| | ||| | |||||| ||||| ||| ||||| |||||||||    
T  20982626 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 20982527  T
Q  184 gcctt 188  Q
    |||||    
T  20982526 gcctt 20982522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 29957919 - 29957815
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||||||| ||||| | ||| | |||||| ||||| ||| ||||| |||||||||    
T  29957919 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 29957820  T
Q  184 gcctt 188  Q
    |||||    
T  29957819 gcctt 29957815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 17366750 - 17366817
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| |||||||||||||||| |||||  |||||||| ||||||||||| |||||||||||||    
T  17366750 gattagtaacttcagggacgaaaattcaaatggactatatttgcaaggacgaaagacatatttaagcc 17366817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 20101872 - 20101769
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || |||||||| || | ||| |||||||||||| ||||||| ||||| | ||||| |||||| ||||| ||| ||||| |||||||||    
T  20101872 tcaaatgattattaattgcaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacagggatgaaaagcatatttaa 20101773  T
Q  184 gcct 187  Q
    ||||    
T  20101772 gcct 20101769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 41846652 - 41846585
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || |||||||| || ||||||||||    
T  41846652 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacttatttaagcc 41846585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 5608711 - 5608637
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaa 141  Q
    ||||||| || ||||||||||||||||||  ||||||| | || ||||||||||||||||| |||||||||||||    
T  5608711 ctaattaagatcaaaagtcaaatgattaaattttgcagtgccaaattggaaggattagtaacttcagggacgaaa 5608637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 13646198 - 13646122
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatt 144  Q
    ||||||||||||||  | || |||||||||||||||||| || ||||| ||||||||||||| ||||||| ||||||    
T  13646198 taattaggaccaaattttaagtgattaatatttgcaggggcaaattgggaggattagtaagtacagggactaaaatt 13646122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 13652075 - 13652151
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatt 144  Q
    ||||||||||||||  | || |||||||||||||||||| || ||||| ||||||||||||| ||||||| ||||||    
T  13652075 taattaggaccaaattttaagtgattaatatttgcaggggcaaattgggaggattagtaagtacagggactaaaatt 13652151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 45663768 - 45663700
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
    ||||||||| |||| | ||||||||| ||||||||||||||| || |||||||| ||||||||||||||    
T  45663768 gattagtaacttcaagaacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcct 45663700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 24387453 - 24387350
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||| ||| || ||||| | ||| |||||||||||| ||||||| ||||| ||||||| |||||| || || ||| ||||  |||||||||    
T  24387453 tcaaatgattaatttttacatggacaaaatgggaggattagtaagctcagggatgaaaaattaaatggcctataattgcagggatgaaatgcatatttaa 24387354  T
Q  184 gcct 187  Q
    ||||    
T  24387353 gcct 24387350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 18477187 - 18477257
Alignment:
Q  113 tggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||| ||||||||| |||| ||||||||||||||||| | ||||||| || |||||||| ||||||||||    
T  18477187 tggaatgattagtaacttcatggacgaaaatttaaatggcttatatttgcagggacgaaatacatatttaa 18477257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 20983259 - 20983361
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||||||| ||||| | ||| |  ||||| ||||| ||| ||||| |||||||||    
T  20983259 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggtctataattacagggatgaaaagcatatttaa 20983358  T
Q  184 gcc 186  Q
    |||    
T  20983359 gcc 20983361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 24608030 - 24607944
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctat 156  Q
    ||||||||||||| ||||||||||||||||||  | |   | ||| |||||||||||| |||||||| ||||||| |||||||||||    
T  24608030 attaggaccaaaattcaaatgattaatatttgtggtggatgtttgaaaggattagtaacttcagggaagaaaattcaaatgacctat 24607944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 29958545 - 29958647
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || ||  |||| || | |||||||||||||||||||||||| ||||| | |||   |||||| ||||| ||| |||||||||||||||    
T  29958545 tcaaatgattagtaattataggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacagcctataattacagggatgaaaaacatatttaa 29958644  T
Q  184 gcc 186  Q
    |||    
T  29958645 gcc 29958647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 32519279 - 32519345
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  32519279 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 32519345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 9694002 - 9693937
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
    ||||||||| || ||||||||||||| ||||||||||||||| || ||||||||| | ||||||||    
T  9694002 gattagtaactttagggacgaaaattcaaatgacctatatttgcagggacgaaaatcctatttaag 9693937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 17580452 - 17580516
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||| |||||||||||||||| |||||| |||||||| |||||| |||| || |||||||    
T  17580452 gattagtaacttcagggacgaaaattcaaatgatctatatttgcaaggatgaaagacctatttaa 17580516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 186
Target Start/End: Original strand, 25624433 - 25624533
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||||| ||| |||||  | | ||| |||||||||||| ||||||| ||||| | |||||||||||| ||||| ||| ||||  |||||||||||    
T  25624433 aaatgattaatttttacaggggaaaaatgggaggattagtaagctcagggatgaaaaatcaaatgacctataattacagggatgaaatgcatatttaagc 25624532  T
Q  186 c 186  Q
    |    
T  25624533 c 25624533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 22731792 - 22731725
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| || ||||||||||||| ||||||||||||||| || ||| |||| || ||||||||||    
T  22731792 gattagtaactttagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcc 22731725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 43682117 - 43682050
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| |||||||||||||||| |||| ||||| |||| ||  ||||||| |||||||||||||    
T  43682117 gattagtaacttcagggacgaaaattcaaataacctaaatttgcagagacgaaagacatatttaagcc 43682050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 1150061 - 1150127
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| |||||||||||||||  | ||| |||| || |||||||||    
T  1150061 gattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaagc 1150127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 16367223 - 16367157
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| |||||||||||||||  | ||| |||| || |||||||||    
T  16367223 gattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaagc 16367157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 11830225 - 11830314
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctat 156  Q
    ||||||| |||||||| |||||| |||| |||| | |  | |||||||||||||||||||| | || ||| ||||||| |||||||||||    
T  11830225 ctaattatgaccaaaaatcaaataattagtattcgtaatggcagattggaaggattagtaactccatggatgaaaattcaaatgacctat 11830314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 20911254 - 20911295
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  20911254 gattagtaacttcagggacgaaaattcaaatgacctatattt 20911295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 20103142 - 20103246
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || ||||| || || | ||| |||||||||||| ||||||| ||||| |  |||| |||||| ||||| |||  |||| |||||||||    
T  20103142 tcaaatgattagtaattgcatgggcaaaatgggaggattagtaagctcagggatgaaaaatctaatggcctataattacagggataaaaagcatatttaa 20103241  T
Q  184 gcctt 188  Q
    |||||    
T  20103242 gcctt 20103246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 186
Target Start/End: Complemental strand, 25623388 - 25623288
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||||| ||| ||||| || | ||| |||||||||||| ||||||| ||||| | ||||| |||||| ||| | ||| ||||  |||||||||||    
T  25623388 aaatgattaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattatagggatgaaatgcatatttaagc 25623289  T
Q  186 c 186  Q
    |    
T  25623288 c 25623288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 19607169 - 19607130
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcaggga 107  Q
    ||||||| |||||||||||||| |||||||||||||||||    
T  19607169 taattagaaccaaaagtcaaattattaatatttgcaggga 19607130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 22309691 - 22309624
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| || ||||||||||||| ||||||||||||||| || |||| |||  | ||||||||||    
T  22309691 gattagtaactttagggacgaaaattcaaatgacctatatttgcagggacaaaatgcctatttaagcc 22309624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 8089576 - 8089642
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||| ||||||||||| ||| ||||||||||| || ||| |||| || |||||||||    
T  8089576 gattagtaacttcaaggacgaaaattcaaacgacctatatttgcagggatgaaagacctatttaagc 8089642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 15075144 - 15075218
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatt 144  Q
    ||||||||||||| | ||||||||| || ||||| ||| |  |||||||||||||||||| ||| ||| ||||||    
T  15075144 attaggaccaaaaattaaatgattagtaattgcatggaaattttggaaggattagtaagtacagagactaaaatt 15075218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 28599552 - 28599618
Alignment:
Q  120 attagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    |||||||| |||||||||||||||| |||||  |||||||| || || ||||| || ||||||||||    
T  28599552 attagtaatttcagggacgaaaattcaaatggtctatatttgcaggggcgaaagacctatttaagcc 28599618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 34404967 - 34405037
Alignment:
Q  74 ggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatt 144  Q
    ||||||||| |||||||||||  ||||||||||| |  |||| ||||||||||||| || |||| ||||||    
T  34404967 ggaccaaaactcaaatgattagaatttgcagggaaattttgggaggattagtaagtacatggactaaaatt 34405037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 33881693 - 33881580
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||| | || |||||||||||||||| | || | ||| || |||| |||  | ||||| |||| || ||||| |||||||||||| |||    
T  33881693 taattaggaccaaaactgaagtgattaatatttgcagtggcaaaatgggagaattaataaccttagggatgaaatttcaaatgccctatatttacaggga 33881594  T
Q  168 cgaaaaacatattt 181  Q
     ||||  |||||||    
T  33881593 tgaaatgcatattt 33881580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 4375673 - 4375737
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||| |||||||||||||||| ||||  | ||||||| ||  ||||||| ||||||||||    
T  4375673 gattagtaacttcagggacgaaaattcaaattgcatatatttgcagagacgaaagacatatttaa 4375737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 5608876 - 5608952
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||||||||||||||||||  | || | || |||||||||||| || || || ||||||| |||||| ||||||||    
T  5608876 tcaaatgattaatatttgcaatggcaaaatgaaaggattagtaactttagagaggaaaattcaaatgatctatattt 5608952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 7983816 - 7983884
Alignment:
Q  92 ttaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||||||||||| ||  | |||| ||||||||||||||||  || |||| || |||||||||||||||    
T  7983816 ttaatatttgcagtgaaggtttgggaggattagtaagttcatagatgaaatttcaaatgacctatattt 7983884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 1e-59; HSPs: 103)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 1047402 - 1047591
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| ||||||||||||||||||| || |||||| |||||||||| |||||||||||       ||||||||||||||||||||||||||||||||||    
T  1047402 ctcgcccaatcatcacttgccacatgtacaccacgtcgctaatgacaacccacctcagctaaaaaatctaattaggaccaaaagtcaaatgattaatatt 1047501  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagccttg 189  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||| |||||||||||||||||| ||| |||| ||||||||||||||||    
T  1047502 tgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatgacctatatttacagggatgaaagacatatttaagccttg 1047591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 26953287 - 26953100
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||||| ||||||||||||||| ||||||       ||||||||||||||||||||||||||||||||||    
T  26953287 ctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccagctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatt 26953188  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
    ||||||| ||||||| |||||||||||| |||||||||||||||| ||||   |||||||| ||||||||||| ||||||||||||||    
T  26953187 tgcaggggcagattgaaaggattagtaacttcagggacgaaaattcaaatagtctatatttgcaaggacgaaagacatatttaagcct 26953100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 2953650 - 2953464
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||  | |||||| | ||||||||||||||||||||       |||||||| |||||||||||||||||||||||||    
T  2953650 ctcgcccaatcatcacttgccacatgtgcaccacgtcgttaatgacagcccacctcagcaaaaaaatctaattatgaccaaaagtcaaatgattaatatt 2953551  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||| ||||||| |||||||||||| || ||||||||||||| |||||||||||||||||| |||||||| |||||||||||||    
T  2953550 tgcaggggcagattgaaaggattagtaactttagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagcc 2953464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 49003061 - 49002879
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||||| |||||||||||||||||||| |        |||||||||||||||||||||||||||||||||    
T  49003061 ctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcaacaaaaaac-ctaattaggaccaaaagtcaaatgattaatatt 49002963  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||| |||||||||||||||||||| |||| ||||||||||| ||||||||||||||| || |||||||| ||||||||||    
T  49002962 tgcaggggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 49002879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 5183692 - 5183507
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||  | |||||| |||||||| |||||||||||||       ||||||||||||||||||||||||||||||||||    
T  5183692 ctcgcccaatcatcacttgccacatgtgcaccacgtcgctaatgatagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatt 5183593  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||| |||||||||||||||||||| || | ||||||||||| ||||||||||||||| || | |||||| ||||||||||||    
T  5183592 tgcaggggcagattggaaggattagtaactttatggacgaaaattcaaatgacctatattttcaggaacgaaagacatatttaagc 5183507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 29980817 - 29980642
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||| || |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||    
T  29980817 aatcatcacttgccacatgggcaccacgttgcaaatgacagcccacctcagcaaaaaac-ctaattaggaccaaaagtcaaatgattaatatttgcaggg 29980719  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
     |||||||||| ||||||||| |||| || |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  29980718 gcagattggaaagattagtaacttcatgggcgaaaattcaaatgacctatatttacaaggacgaaagacatatttaa 29980642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 739416 - 739602
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||||| |||||||||||| |||||||||        |||||||||| ||||||||||||||||||||||    
T  739416 ctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagctcacctcagcaaaaaaacctaattaggatcaaaagtcaaatgattaatatt 739515  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||||||||| |||||||||||| |||| | ||||||||| ||||||||||||||| ||  |||||||| ||||||||||||    
T  739516 tgcagggacagattgaaaggattagtaacttcatgtacgaaaattcaaatgacctatatttgcagagacgaaaatcatatttaagcc 739602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 33347602 - 33347413
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||| | |||||||||||||||||||| |        |||||||||||||||||||||||||||||||||    
T  33347602 ctcgcccaatcatcacttgccacatgggcaccacatcgctaatgacagcccacctcaacaaaaaaacctaattaggaccaaaagtcaaatgattaatatt 33347503  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagccttg 189  Q
    || |||| ||||||||||| |||||||| ||||||||||||| || ||||||| ||||||| || |||||||| ||||||||||||||||    
T  33347502 tgtaggggcagattggaagaattagtaacttcagggacgaaagttcaaatgacttatatttgcagggacgaaagacatatttaagccttg 33347413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 24701456 - 24701261
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||||| ||||||||||||||||||||||        |||||||||||||||||| ||||||||||  ||    
T  24701456 ctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaaagttaaatgattaaattt 24701357  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagccttgattaaa 195  Q
    ||||| | |||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||  ||||||| || |||||||||||| ||||||    
T  24701356 tgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgagctatatttgcagagacgaaagacttatttaagcctttattaaa 24701261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 37152717 - 37152544
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||||||       ||||||||||| ||||||||||||||||| |||||||| ||    
T  37152717 aatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggatcaaaagtcaaatgattagtatttgcacgg 37152618  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatt 180  Q
     |||||||||||||||||||| |||| ||||||||||| |||||||||||||||  | |||||||| |||||||    
T  37152617 gcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgtagggacgaaagacatatt 37152544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 2953730 - 2953848
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||    
T  2953730 taattaggaccaaaaatcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaggga 2953829  T
Q  168 cgaaaaacatatttaagcc 186  Q
    ||||| |||||||||||||    
T  2953830 cgaaagacatatttaagcc 2953848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 25415030 - 25414843
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||| ||||||| | |||||| |||||||||| | |||||||||        |||||||||||||||||||||||||||||||||    
T  25415030 ctcgcccaatcatcacttgtcacatgggcaccacgtcgctaatgacaactcacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatt 25414931  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
    ||||||| |||||||||||||||||||| ||||| || ||||||| ||||| |||||||||  | |||||||| ||||||||||||||    
T  25414930 tgcaggggcagattggaaggattagtaacttcagagaagaaaattcaaatggcctatatttgtagggacgaaagacatatttaagcct 25414843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 29042960 - 29043139
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||| ||||||||  ||||||||||||       | ||||||||| |||||||||||||||||||||||||||||    
T  29042960 aatcatcacttgccacatgggcaccacgtcgctaatgatggcccacctcagcaaaaaaatttaattaggatcaaaagtcaaatgattaatatttgcaggg 29043059  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
     ||||||| |||||||||||| |||||||||||||||| ||||| ||||||||| ||  ||||||| |||||||||||||    
T  29043060 gcagattgaaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagagacgaaagacatatttaagcc 29043139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 6056494 - 6056374
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||||| ||||||||||||||| || |||    
T  6056494 taattaggaccaaaagtcaaatgattaatatttgcagggacatattggaaggatcagtaattttagggacgaaaattcaaatgacctatatttgcaggga 6056395  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| |||||||||||||||    
T  6056394 cgaaagacatatttaagcctt 6056374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 1040416 - 1040297
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||| ||||| | ||||||| ||||||    
T  1040416 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaattcaaatggcttatatttgcaagga 1040317  T
Q  168 cgaaaaacatatttaagcct 187  Q
    ||||| ||||||||||||||    
T  1040316 cgaaagacatatttaagcct 1040297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 1047322 - 1047203
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||| ||||| | ||||||| ||||||    
T  1047322 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaattcaaatggcttatatttgcaagga 1047223  T
Q  168 cgaaaaacatatttaagcct 187  Q
    ||||| ||||||||||||||    
T  1047222 cgaaagacatatttaagcct 1047203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 187 - 298
Target Start/End: Original strand, 49258945 - 49259056
Alignment:
Q  187 ttgattaaattactcaactattgataccaaaagaaagggnnnnnnncagatgatgttgaatgcagacaaaatgtcatgaatagacaagacttttcactaa 286  Q
    |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49258945 ttgattaaattactcaactattgataccaaaagaaagggaaaaaaacagatgatgttgaatgcagactaaatgtcatgaatagacaagacttttcactaa 49259044  T
Q  287 attcacttttcc 298  Q
    ||||||||||||    
T  49259045 attcacttttcc 49259056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 68 - 187
Target Start/End: Original strand, 12577278 - 12577397
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||| ||||||| || |||    
T  12577278 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaatttaaatgacttatatttgcaggga 12577377  T
Q  168 cgaaaaacatatttaagcct 187  Q
    ||||| || |||||||||||    
T  12577378 cgaaagacctatttaagcct 12577397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 68 - 187
Target Start/End: Original strand, 19755671 - 19755790
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  |||||| ||||||||||||||| || |||    
T  19755671 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggataaaaattcaaatgacctatatttgcaggga 19755770  T
Q  168 cgaaaaacatatttaagcct 187  Q
    ||||| || |||||||||||    
T  19755771 cgaaagacctatttaagcct 19755790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 46849924 - 46850042
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||||| ||||||||||||||| || |||    
T  46849924 taattaggaccaaaagtcaaatgattaatatttgcaggggcaaattggaaggatcagtaacttcagggacgaaaattcaaatgacctatatttgcaggga 46850023  T
Q  168 cgaaaaacatatttaagcc 186  Q
    ||||| || ||||||||||    
T  46850024 cgaaagacctatttaagcc 46850042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 12577198 - 12577008
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntc-taattaggaccaaaa-gtcaaatgattaata 97  Q
    |||||| |||||||||||||||||||| | | |||| |||||||||||| |||||||||        | ||||||||||||||| |||||||||||||||    
T  12577198 ctcgcccaatcatcacttgccacatgggcactacgtcgctaatgacagctcacctcagcaaaaaaaacctaattaggaccaaaaagtcaaatgattaata 12577099  T
Q  98 tttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||||||| ||||||| || ||||||||| ||||  |||||||||| ||||| |||||||||||| |||||||| |||||||||||||||    
T  12577098 tttgcaggggcagattgaaatgattagtaacttcatagacgaaaattcaaatggcctatatttacagggacgaaagacatatttaagcctt 12577008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 739337 - 739217
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||| ||||||||||| |||||  |||||||| || |||    
T  739337 taattaggaccaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcaaggacgaaaattcaaatggtctatatttgcaggga 739238  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    |||||||| ||||||||||||    
T  739237 cgaaaaacctatttaagcctt 739217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 49003141 - 49003261
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||| |||| ||||||||||| ||||||||||||||| || |||    
T  49003141 taattaggaccaaaaatcaaatgattaatatttgcagaggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcaggga 49003240  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| || ||||||||||||    
T  49003241 cgaaagacctatttaagcctt 49003261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 187
Target Start/End: Original strand, 33347682 - 33347801
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||| ||||||||||| ||||||||||||||| || |||    
T  33347682 taattaggaccaaaagtcaaatgattaatatttgcaagggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcaggga 33347781  T
Q  168 cgaaaaacatatttaagcct 187  Q
    ||||| || ||| |||||||    
T  33347782 cgaaagacctatataagcct 33347801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 46849837 - 46849661
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||| |||||||| |||||||||||||        ||||||| ||||||||||||||||| |||||||| |||||    
T  46849837 aatcatcacttgccacatgggcaccacgtcgctaatgatagcccacctcagcaaaaaaacctaattatgaccaaaagtcaaatgactaatatttacaggg 46849738  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
     ||||||| ||| |||| ||| |||||||||||||||| |||||||||||||||||| |||||| | ||||| ||||    
T  46849737 gcagattgaaagaattaataacttcagggacgaaaattcaaatgacctatatttacagggacgagagacatacttaa 46849661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 67 - 181
Target Start/End: Complemental strand, 5926638 - 5926524
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    ||||||| |||||||||||||||||||||| ||||||||| || ||||||||||||||||| |||||||||||||||| ||||||||||||||| || ||    
T  5926638 ctaattaagaccaaaagtcaaatgattaatgtttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaggg 5926539  T
Q  167 acgaaaaacatattt 181  Q
    |||||| ||||||||    
T  5926538 acgaaagacatattt 5926524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 8 - 187
Target Start/End: Original strand, 48380886 - 48381068
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntc--taattaggaccaaaagtcaaatgattaatatttgcag 104  Q
    |||||||||||||||||||||| |||||| |||||||||| ||||||| |||           |||||||||||||||||||||||||||||||||||||    
T  48380886 aatcatcacttgccacatggacaccacgtcgctaatgacaacccaccttagcaaaaaaaaacataattaggaccaaaagtcaaatgattaatatttgcag 48380985  T
Q  105 ggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
     | |||||||||||||||| ||| || | ||||||||||||||||||  |||||||||| |||||||| || |||||||||||    
T  48380986 cggcagattggaaggattaataactttaaggacgaaaatttaaatgaattatatttacagggacgaaagacttatttaagcct 48381068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 25415110 - 25415227
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| |||||| ||||||||| ||||||| ||||||| || |||    
T  25415110 taattaggaccaaaagtcaaatggttaatatttgcaggaacatattggaaggattagtaacttcaggaacgaaaattcaaatgacttatatttgcaggga 25415209  T
Q  168 cgaaaaacatatttaagc 185  Q
    ||||||| ||||||||||    
T  25415210 cgaaaaatatatttaagc 25415227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 29980904 - 29981021
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||||||| ||||||||||||||| ||| ||    
T  29980904 taattaggaccaaaaatcaaatgattaatatttgcaggggcaaattggaaggattagtaacttccgggacgaaaattcaaatgacctatatttgcaaaga 29981003  T
Q  168 cgaaaaacatatttaagc 185  Q
    ||||| || |||||||||    
T  29981004 cgaaagacctatttaagc 29981021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 37152804 - 37152921
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||| |||||  |||||||| || |||    
T  37152804 taattaggactaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatggactatatttgcaggga 37152903  T
Q  168 cgaaaaacatatttaagc 185  Q
    ||||| ||||||||||||    
T  37152904 cgaaagacatatttaagc 37152921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 75 - 187
Target Start/End: Complemental strand, 46364685 - 46364573
Alignment:
Q  75 gaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaa 174  Q
    ||||||||||||||||||||||||||| |||||||||| | || ||||||||| |||||||||||||||| ||||||||||||||| || |||||||| |    
T  46364685 gaccaaaagtcaaatgattaatatttgtagggacagatggaaaagattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaaga 46364586  T
Q  175 catatttaagcct 187  Q
    |||||||||||||    
T  46364585 catatttaagcct 46364573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 5183772 - 5183890
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||| |||||||||||||||| ||||| ||||||||| || |||    
T  5183772 taattaggaccaaaagtcaaatgattaatatttgcaggggcaaattggaaggattcgtaacttcagggacgaaaattcaaatggcctatatttgcaggga 5183871  T
Q  168 cgaaaaacatatttaagcc 186  Q
    | ||| || ||||||||||    
T  5183872 caaaagacgtatttaagcc 5183890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 187
Target Start/End: Complemental strand, 8890388 - 8890211
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||| | |||||||||| ||||||||||        |||||||| ||||||||||||||||||||||||||| || |    
T  8890388 aatcatcacttgccacatgggcaccacatcgctaatgacaacccacctcag--taaaaatctaattacgaccaaaagtcaaatgattaatatttggagtg 8890291  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
     |||||||||| ||||||||| ||||||||| || ||| ||||||||||||||| || |||||||| || |||||||||||    
T  8890290 gcagattggaaagattagtaacttcagggac-aatattcaaatgacctatatttgcagggacgaaatacctatttaagcct 8890211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 6056581 - 6056763
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnnt--ctaattaggaccaaaagtcaaatgattaatatttgcag 104  Q
    |||||||||||| ||||||| | |||||| ||||||||||||||||||||||          ||||||| ||||||| ||||||||||||||||||||||    
T  6056581 aatcatcacttgtcacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaaacctaattatgaccaaatgtcaaatgattaatatttgcag 6056680  T
Q  105 ggacagattggaaggattagtaagtt-cagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    || ||||||| |||||||||||| || |||||| ||||||| ||||| | ||||||| || |||||||| |||||||||||||    
T  6056681 gggcagattgaaaggattagtaacttacagggatgaaaattcaaatggcttatatttgcagggacgaaagacatatttaagcc 6056763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 84 - 193
Target Start/End: Complemental strand, 48380783 - 48380674
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||| ||||||  | |||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| || |||||||    
T  48380783 tcaaatgattaatttttgcactggcagattggaaggattagtaacttcagcgacgaaaattcaaatgacctatatttacaaggacgaaagacctatttaa 48380684  T
Q  184 gccttgatta 193  Q
    ||||| ||||    
T  48380683 gccttaatta 48380674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 5926787 - 5926905
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||| ||||||||| | ||||||||| |||||||||| |||||||| ||||||| |||||  |||||||| || |||    
T  5926787 taattaggaccaaaagtcaaatgattactatttgcagaggcagattggacggattagtaacttcagggatgaaaattcaaatggtctatatttgcaggga 5926886  T
Q  168 cgaaaaacatatttaagcc 186  Q
    ||||| || ||||||||||    
T  5926887 cgaaagacctatttaagcc 5926905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 33030600 - 33030720
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||| |||||||||||| |||| ||||||||||| |||||| |||||||| || |     
T  33030600 ctaattagaaccaaaagtcaaatgattaatatttgcagtggcagattgaaaggattagtaatttcatggacgaaaattcaaatgatctatatttgcagga 33030699  T
Q  167 acgaaaaacatatttaagcctt 188  Q
    |||||| || ||||||||||||    
T  33030700 acgaaagac-tatttaagcctt 33030720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 29042873 - 29042754
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||| | |||||||| | ||||| |||||||||||  |||    
T  29042873 taattatgaccaaaaatcaaatgattaatatttgcagggacagattggaaggattaataacttccgcgacgaaaaatcaaatggcctatatttac-ggga 29042775  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| |||||||||| ||||    
T  29042774 cgaaagacatatttaaacctt 29042754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 188
Target Start/End: Complemental strand, 35312155 - 35311972
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnnt--ctaattaggaccaaaagtcaaatgattaatatttgcag 104  Q
    |||||||||||||||||||| | ||| || |||||||||| |||||||||||          |||||||||||  ||||||||||||||||  ||||||     
T  35312155 aatcatcacttgccacatgggcaccatgtcgctaatgacaacccacctcagcaaaaaaaaacctaattaggactgaaagtcaaatgattaaattttgcaa 35312056  T
Q  105 ggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
     |||||||||||| ||||||||| ||||| |||||||||| |||||||||||||||| | |||||||| || ||||||| ||||    
T  35312055 tgacagattggaatgattagtaacttcagtgacgaaaattcaaatgacctatatttatagggacgaaagacctatttaaacctt 35311972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 33030436 - 33030333
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||||||| |||||||||| | ||||||||||| |||||||| |||||||||||||||| ||||||||||||||| || |||| ||| || |||||||    
T  33030436 tcaaatgattcatatttgcagtggcagattggaagaattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacaaaagacctatttaa 33030337  T
Q  184 gcct 187  Q
    ||||    
T  33030336 gcct 33030333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 26953367 - 26953484
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||||||||||||||||||||||||||||| |  ||||||||||| |||||||| |||||| | ||||||| |||||   ||||||| || |||    
T  26953367 taattaggaccaaaagtcaaatgattaatatttgcaagagcagattggaagaattagtaacttcaggaatgaaaattcaaatggtttatatttgcaggga 26953466  T
Q  168 cgaaaaacatatttaagc 185  Q
    ||||| | ||||||||||    
T  26953467 cgaaatatatatttaagc 26953484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 8890491 - 8890595
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||| |||| ||||||| ||||||| | |||| ||||||| ||| ||||||||||||||| || |||||||| || |||||||    
T  8890491 tcaaatgattaatatttgcagtgacatattggaatgattagtcacttcatggacgaatattcaaatgacctatatttgcagggacgaaagacctatttaa 8890590  T
Q  184 gcctt 188  Q
    |||||    
T  8890591 gcctt 8890595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 28533895 - 28533775
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||| || |||||||||  | |||| |||||||||||||  ||||||||||||| ||| || |  ||||| || |||    
T  28533895 taattaggaccaaaagtcaaatgattagtaattgcagggaaggtttgggaggattagtaagtatagggacgaaaattcaaacgagccctatttgcaggga 28533796  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| |||||||||||||||    
T  28533795 cgaaacacatatttaagcctt 28533775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 68 - 160
Target Start/End: Original strand, 46364841 - 46364933
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| |||| ||||||||||| |||| || |||||||    
T  46364841 taattaggatcaaaagtcaaatgattaatatttgcaggggcatattgaaaggattagtaatttcaaggacgaaaattcaaataacttatattt 46364933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 49990060 - 49990180
Alignment:
Q  66 tctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaag 165  Q
    |||||||| ||||||||||||||||||||||||||| ||||  ||||| ||||||||| ||| ||||  |||||||||| ||||   |||||||| || |    
T  49990060 tctaattaagaccaaaagtcaaatgattaatatttgtaggggtagatttgaaggattaataacttcaaagacgaaaattcaaatagtctatatttgcagg 49990159  T
Q  166 gacgaaaaacatatttaagcc 186  Q
    ||||||| |||||||||||||    
T  49990160 gacgaaagacatatttaagcc 49990180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 34176109 - 34175922
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagc-nnnnnnntctaattaggaccaaaagtcaaatgattaatat 98  Q
    |||||| |||||||||||||||||||| | |||||| ||||||||||| ||||||||||         ||||||| ||||||||||||||||||||| ||    
T  34176109 ctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagtccacctcagcaaaaaaaaactaattatgaccaaaagtcaaatgattaacat 34176010  T
Q  99 ttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    || |||    | | ||||||||||| ||| ||||  |||||||||| |||||||||| ||||||||| || ||| || ||||||||||    
T  34176009 tttcagtagtaaaatggaaggattaataacttcaatgacgaaaattcaaatgacctaaatttacaagaacaaaagacctatttaagcc 34175922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 84 - 163
Target Start/End: Original strand, 46545013 - 46545092
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttaca 163  Q
    ||||||||||||||||||||| | || | ||||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  46545013 tcaaatgattaatatttgcagtggcaaaatggaaggattagtaacttcagggacgaaacttcaaatgacctatatttaca 46545092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 46282173 - 46282071
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||||||| ||||| | ||| |||||||| ||||| ||| |||||||||||||||    
T  46282173 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacgacctataattacagggatgaaaaacatatttaa 46282074  T
Q  184 gcc 186  Q
    |||    
T  46282073 gcc 46282071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 49989913 - 49989831
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatg 150  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||| ||| |||| | ||||||| |||||||    
T  49989913 taattaggaccaaaagtcaaatgattaatatttgcagaggcagattgaaaggattaataacttcaagaacgaaaaattaaatg 49989831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 172
Target Start/End: Complemental strand, 10019543 - 10019387
Alignment:
Q  17 ttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntc-taattaggaccaaaagtcaaatgattaatatttgcagggacagattg 114  Q
    ||||||||||| | |||||| ||||||||||||||||||||||        | ||||||||| ||||||||||||||||||  ||||||     ||||||    
T  10019543 ttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaacctaattaggatcaaaagtcaaatgattaaattttgcaatagtagattg 10019444  T
Q  115 gaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaa 172  Q
    ||||||||||||| |||| ||| ||||||||||||| ||||||||| || ||||||||    
T  10019443 gaaggattagtaacttca-ggatgaaaatttaaatggcctatatttgcatggacgaaa 10019387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 37152541 - 37152465
Alignment:
Q  78 caaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacct 154  Q
    ||||||||||||||||| |||||||| || || ||||||||||||||||| |||| ||||||||||| |||||||||    
T  37152541 caaaagtcaaatgattagtatttgcaagggcatattggaaggattagtaacttcatggacgaaaattcaaatgacct 37152465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 30830317 - 30830166
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntct-aattaggaccaaaagtcaaatgattaatat 98  Q
    |||||| |||||||||||||||||||| | |||||| ||||||||||||||||| ||||        |  |||||||| ||||| ||||||||||||  |    
T  30830317 ctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccaccccagcaaaaaaaacccaattaggatcaaaattcaaatgattaaatt 30830218  T
Q  99 ttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatg 150  Q
    |||| | | |||||||||| ||||| ||| |||||||||||||||| |||||    
T  30830217 ttgcggtggcagattggaatgattattaacttcagggacgaaaattcaaatg 30830166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 2828311 - 2828191
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||| ||| |||| ||||||||||||||||||||| | || | | |||||||||||||||| | ||| ||||| | |||||| ||||| || ||||||    
T  2828311 taattaagacgaaaattcaaatgattaatatttgcagaggcaaaatagaaggattagtaagtttatggatgaaaaatcaaatgatctataattgcaagga 2828212  T
Q  168 cgaaaaacatatttaagcctt 188  Q
     ||||  ||||||||||||||    
T  2828211 tgaaatgcatatttaagcctt 2828191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 35312258 - 35312362
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  |||| | ||||||||||||||| | || ||||||||||| |||| |  |||||||||| | |||||| || |||||||    
T  35312258 tcaaatgattaatatttgcaatgacaaaatggaaggattagtaactccaaggacgaaaattcaaataagatatatttacaggaacgaaagacttatttaa 35312357  T
Q  184 gcctt 188  Q
    |||||    
T  35312358 gcctt 35312362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 52455037 - 52455140
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||||||||||| |||||| | |||||||||||||||| ||| || | |||||||||||||||| || ||||||| || |||| |||||| |||||||    
T  52455037 tcaaatgattaatagttgcagtggcagattggaaggattaataactttatggacgaaaatttaaataacttatatttgcatggacaaaaaac-tatttaa 52455135  T
Q  184 gcctt 188  Q
     ||||    
T  52455136 acctt 52455140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 158
Target Start/End: Original strand, 10019655 - 10019729
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatat 158  Q
    ||||||||||||||||||||  | || | ||||||||||||||| |||||||| ||||||| |||||||||||||    
T  10019655 tcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggatgaaaattcaaatgacctatat 10019729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 187
Target Start/End: Original strand, 28534780 - 28534897
Alignment:
Q  70 attaggaccaaaagtcaaatgatt-aatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggac 168  Q
    |||||||  |||| |||||||||| ||||||||||| |  | | |||||||||||||||||||||||| |||| || ||||| ||||||||||| || ||    
T  28534780 attaggatgaaaattcaaatgatttaatatttgcagaggtaaaatggaaggattagtaagttcagggatgaaatttcaaatgccctatatttac-agaac 28534878  T
Q  169 gaaaaacatatttaagcct 187  Q
    ||||  |||||||||||||    
T  28534879 gaaatgcatatttaagcct 28534897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 52454866 - 52454757
Alignment:
Q  75 gaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaa 174  Q
    ||||| ||||||||| |||||||||||||| | |||||||||| ||||  ||| |||| ||||||||| | ||||||||||||||| || || ||||| |    
T  52454866 gaccagaagtcaaat-attaatatttgcagtggcagattggaatgattgataacttcatggacgaaaagtcaaatgacctatatttgcatgggcgaaaga 52454768  T
Q  175 catatttaagc 185  Q
    | |||||||||    
T  52454767 cttatttaagc 52454757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 6334764 - 6334655
Alignment:
Q  78 caaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacat 177  Q
    |||||| |||||||||||||||||||| | ||||| |||||||||||||| || |   ||||||||| |||||  |||||||| || ||| |||| || |    
T  6334764 caaaagccaaatgattaatatttgcagtggcagatcggaaggattagtaactttaacaacgaaaattcaaatggtctatatttgcagggatgaaagactt 6334665  T
Q  178 atttaagcct 187  Q
    ||||||||||    
T  6334664 atttaagcct 6334655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 6345619 - 6345704
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacc 153  Q
    |||||||||| |||  | ||||| ||||||||||||||| || | |||||||||||||||||||||||| |||| || ||||||||    
T  6345619 taattaggactaaattttaaatgcttaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatgacc 6345704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 24701551 - 24701664
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||| |||||||||| |  | || | ||||||||||||||| |||||||||||||||| ||||| | ||||||| || ||| |||| || |||||||    
T  24701551 tcaaatggttaatatttgtaatggcaaaatggaaggattagtaacttcagggacgaaaattcaaatggcttatatttgcagggatgaaagacctatttaa 24701650  T
Q  184 gccttgattaaatt 197  Q
    ||||| | ||||||    
T  24701651 gcctttaataaatt 24701664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 30830397 - 30830515
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||||| |  ||||||||||||||||||||  | || | ||||| ||||||||| ||   ||||||||||| ||||||| ||||||| ||||||    
T  30830397 taattaggaccatatttcaaatgattaatatttgcaatggcaaaatggaatgattagtaactt---ggacgaaaattcaaatgacttatatttgcaagga 30830493  T
Q  168 cgaaaa-acatatttaagcctt 188  Q
    | |||| || ||||||||||||    
T  30830494 caaaaagacctatttaagcctt 30830515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 6056500 - 6056566
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  6056500 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacttatttaagc 6056566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 29042879 - 29042945
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||| ||||||| ||||||||||||||| |||||| |||| || |||||||||    
T  29042879 gattagtaacttcagggatgaaaattcaaatgacctatatttgcaaggatgaaagacctatttaagc 29042945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 46364835 - 46364769
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  46364835 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 46364769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 46544910 - 46544823
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgatta 94  Q
    |||||||||||||||||||| | ||| || ||||||||||||||||||||||        |||||||||| |||||||||||||||||    
T  46544910 aatcatcacttgccacatgggcaccatgtcgctaatgacagcccacctcagcaaaaaaacctaattaggatcaaaagtcaaatgatta 46544823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 46849918 - 46849852
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| ||||||| ||||||| |||||| |||| || |||||||||    
T  46849918 gattagtaacttcagggacgaaaattcaaatgacatatatttgcaaggatgaaagacctatttaagc 46849852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 51935197 - 51935299
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || |||||||| || | ||| |||||||| ||| ||||||| ||||| | ||||||| |||| ||||| ||| ||||| |||||||||    
T  51935197 tcaaatgattagtaattgcaggggcaaaatgggaggattagaaagctcagggatgaaaaatcaaatgacatataattacatggatgaaaagcatatttaa 51935296  T
Q  184 gcc 186  Q
    |||    
T  51935297 gcc 51935299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 46282791 - 46282888
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattt 181  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||||||| ||||| | ||| | |||||| ||||| ||| ||||| |||||||    
T  46282791 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatattt 46282888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 34176206 - 34176294
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaa 172  Q
    |||||| |||||||||||| | ||||||||  || ||||||||| || ||||| ||||||| |||| ||||||||||| | ||||||||    
T  34176206 tcaaataattaatatttgcggtgacagattaaaaagattagtaactttagggatgaaaattcaaattacctatatttatatggacgaaa 34176294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 10019633 - 10019566
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    |||||| || |||||||||||||||| ||||||| ||||||| || |||||||| || ||||||||||    
T  10019633 gattagcaacttcagggacgaaaattcaaatgacttatatttgcagggacgaaatacctatttaagcc 10019566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 189
Target Start/End: Complemental strand, 13295235 - 13295132
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||||| ||| || || || | |||||||||||||||| ||||||  ||||| | |||||||||||| ||||| ||  ||||  |||||||||||    
T  13295235 aaatgattaatttttacaagggcaaaatggaaggattagtaagctcaggggtgaaaaatcaaatgacctataattacaggggtgaaatgcatatttaagc 13295136  T
Q  186 cttg 189  Q
    ||||    
T  13295135 cttg 13295132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 24701530 - 24701463
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||| ||| |||||||||||||||| ||||||||||||||| || |||||||| |  ||||||||||    
T  24701530 gattaataacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagagctatttaagcc 24701463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 30830391 - 30830324
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| || ||||||||||||| ||||||| ||||||| || |||||||| || ||||||||||    
T  30830391 gattagtaactttagggacgaaaattcaaatgacttatatttgcagggacgaaagacttatttaagcc 30830324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 33347673 - 33347610
Alignment:
Q  122 tagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    |||||| |||||||||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  33347673 tagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 33347610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 49093143 - 49093040
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || || || || | |||||||||||||||||||||||| ||||| | ||| | |||||| ||||| ||| ||||| ||| |||||    
T  49093143 tcaaatgattagtaattacatgggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatgtttaa 49093044  T
Q  184 gcct 187  Q
    ||||    
T  49093043 gcct 49093040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 12577272 - 12577206
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || | |||||||    
T  12577272 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctgtttaagc 12577206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 19755665 - 19755599
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| |||||||||||||||  | ||| |||| || |||||||||    
T  19755665 gattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaagc 19755599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 25415104 - 25415038
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| ||||| |||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  25415104 gattagtaacttcagagacgaaaattcaaatgacctatatttgcatggatgaaagacctatttaagc 25415038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 1040422 - 1040463
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  1040422 gattagtaacttcagggacgaaaattcaaatgacctatattt 1040463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 1047328 - 1047369
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  1047328 gattagtaacttcagggacgaaaattcaaatgacctatattt 1047369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 6344373 - 6344288
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacc 153  Q
    |||||| |||||||  ||||||| |||||||||||| || || | ||| |||||||||||||||| ||| |||| || ||||||||    
T  6344373 taattatgaccaaatttcaaatgtttaatatttgcaagggcaaaatgggaggattagtaagttcatggatgaaatttcaaatgacc 6344288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 183
Target Start/End: Complemental strand, 25065033 - 25064936
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| |||  ||||||||| ||| |||||||||||| ||||||| ||||| | |||| ||||||| || || ||| ||||  |||||||||    
T  25065033 aaatgattaatttttatagggacagaatgggaggattagtaagatcagggatgaaaaatcaaattacctataattgcagggatgaaatgcatatttaa 25064936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 29980897 - 29980832
Alignment:
Q  120 attagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    |||||||| || ||||||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  29980897 attagtaactttagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 29980832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 33030458 - 33030523
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
    ||||||||| |||||  ||||||||| |||||| |||||||| || ||||||||||| ||||||||    
T  33030458 gattagtaacttcagaaacgaaaattcaaatgatctatatttgcagggacgaaaaacctatttaag 33030523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 46544827 - 46544758
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||||||| ||||  |||||||||| ||||||||||||||| |||  |||||| || ||||||||||||    
T  46544827 gattagtaacttcaaagacgaaaattcaaatgacctatatttgcaataacgaaagacttatttaagcctt 46544758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 49003135 - 49003070
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
    ||||||||| |||||||||| ||||| ||||||||||||||| || ||| |||| || ||||||||    
T  49003135 gattagtaacttcagggacggaaattcaaatgacctatatttgcagggatgaaagacttatttaag 49003070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 50062946 - 50063043
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattt 181  Q
    ||||||||||| || || ||| | || | |||||||||||||||||||||||| ||||| | ||| | |||||| ||||| ||| ||||| |||||||    
T  50062946 tcaaatgattagtaattacagaggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatattt 50063043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 26953361 - 26953297
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||| ||||| |||||||||| ||||||||||||||| || ||| |||| || |||||||    
T  26953361 gattagtaacttcagagacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 26953297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 192
Target Start/End: Complemental strand, 52563769 - 52563645
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||| |||| |||||||||||||||| | || | ||| |||||||||||  ||| ||| |||| |  ||||  ||||||||| || |||    
T  52563769 taattaggaccaaaactcaagtgattaatatttgcagtggcaaaatgggaggattagtaacctcaaggatgaaattccaaataccctatatttgcaggga 52563670  T
Q  168 cgaaaaacatatttaagccttgatt 192  Q
     ||||  ||||||| ||||| ||||    
T  52563669 tgaaatgcatattttagcctagatt 52563645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 10019729 - 10019772
Alignment:
Q  145 taaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||||||||||||||||| |||||||| || ||||||||||||    
T  10019729 taaatgacctatatttacagggacgaaagacctatttaagcctt 10019772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 37152798 - 37152731
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| |||| ||||||||||| ||||||| ||||||| || ||| |||| || ||||||||||    
T  37152798 gattagtaacttcaaggacgaaaattcaaatgacttatatttgcatggatgaaagacctatttaagcc 37152731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 52455015 - 52454948
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| || ||||| ||||||| ||||||||||| ||| || |||||||| || ||||||||||    
T  52455015 gattagtaactttagggatgaaaattcaaatgacctatttttgcagggacgaaatacctatttaagcc 52454948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 5183766 - 5183700
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||| ||||||||||| |||||||||||||||  | ||| |||| || |||||||||    
T  5183766 gattagtaacttcatggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaagc 5183700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 49093811 - 49093869
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaa 142  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||||||| |||||    
T  49093811 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaa 49093869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 51933953 - 51933903
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcag 57  Q
    |||||||||||||||||||||| |||||| |||||||||| |||| |||||    
T  51933953 aatcatcacttgccacatggacaccacgtcgctaatgacatcccaactcag 51933903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 8890468 - 8890403
Alignment:
Q  120 attagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    |||||||| |||| ||||||||||| |||||||||||||||  | ||| |||| || |||||||||    
T  8890468 attagtaacttcatggacgaaaattcaaatgacctatatttgaagggaagaaatacctatttaagc 8890403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 32238768 - 32238695
Alignment:
Q  117 aggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagccttga 190  Q
    |||||||||||||||||||| |||| || ||||  ||||||||| || ||| ||||  ||||||| ||||||||    
T  32238768 aggattagtaagttcagggatgaaatttcaaatagcctatatttgcagggatgaaatgcatattttagccttga 32238695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 181
Target Start/End: Complemental strand, 32619486 - 32619389
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattt 181  Q
    ||||||||||| || || ||||| || | ||| |||||||||||| ||||||| ||||| | ||||| || ||| ||||| ||| ||||| |||||||    
T  32619486 tcaaatgattagtaattacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcccataattacagggatgaaaagcatattt 32619389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 32622354 - 32622451
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattt 181  Q
    |||||| |||| || || ||||| || | ||| |||||||||||| ||||||| ||||| | ||||| || ||| ||||| ||| |||||||||||||    
T  32622354 tcaaattattagtaattacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcccataattacagggatgaaaaacatattt 32622451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 739343 - 739383
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatt 159  Q
    ||||||||| |||||| ||||||||| ||||||||||||||    
T  739343 gattagtaacttcaggaacgaaaattcaaatgacctatatt 739383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 2829523 - 2829595
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaa 142  Q
    |||| ||| |||| |||||||||||||||||||||||  | | ||| |||||||||||| ||| ||| |||||    
T  2829523 attatgacgaaaattcaaatgattaatatttgcaggggtaaaatgggaggattagtaagctcaaggatgaaaa 2829595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 160
Target Start/End: Original strand, 52564933 - 52565025
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||||||||||||| |||| ||||||||||||| || | || | |||||| ||||||||  | ||||| |||| || ||| | |||||||||    
T  52564933 taattaggaccaaaactcaagtgattaatatttgtagtggcaaaatggaagaattagtaatcttagggaagaaatttcaaacgccctatattt 52565025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 5e-59; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 8 - 187
Target Start/End: Complemental strand, 43938073 - 43937893
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    ||||||||||||||||||| || |||||| | ||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||    
T  43938073 aatcatcacttgccacatgtacaccacgtcgttaatgacagcccacctcagcaaaaaaatctaattatgaccaaaagtcaaatgattaatatttgcaggg 43937974  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
     |||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  43937973 gcagattggaaggattagtaacttcagggatgaaaattcaaatgacctatatttacaaggacgaaagacatatttaagcct 43937893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 37563540 - 37563353
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||||| ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  37563540 ctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatt 37563441  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||| ||||| ||||||||| || |||| ||| ||||||||||||||    
T  37563440 tgcaggggcagattagaaggattagtaaattcagggacgaaaattcaaatggcctatatttgcagggacaaaagacatatttaagcct 37563353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 26825816 - 26825628
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||||| |||||||||| | |||||||||       |||||||| |||||||||||||||||||||| ||    
T  26825816 ctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacaactcacctcagcaaaaaaatctaattaagaccaaaagtcaaatgattaatctt 26825717  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  26825716 tgcaggggcagattggaatgattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagcctt 26825628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 68 - 187
Target Start/End: Original strand, 43938160 - 43938279
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||| | ||||||| ||||||    
T  43938160 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcttatatttgcaagga 43938259  T
Q  168 cgaaaaacatatttaagcct 187  Q
    ||||| ||||||||||||||    
T  43938260 cgaaagacatatttaagcct 43938279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 70 - 189
Target Start/End: Original strand, 37563622 - 37563741
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacg 169  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||||||||||||| ||||| |||||||||||| |||||    
T  37563622 attaggaccaaaagtcaaaagattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttacagggacg 37563721  T
Q  170 aaaaacatatttaagccttg 189  Q
    ||| ||||||||||||||||    
T  37563722 aaagacatatttaagccttg 37563741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 34454666 - 34454472
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||||| ||||||||||||||||||||||        ||||    || ||||||||||||||||||||||    
T  34454666 ctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaacctaa----gatcaaaagtcaaatgattaatatt 34454571  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagccttgattaaatta 198  Q
    |||||||  ||||||||||||||||||| ||||  |||||||||| ||||||||||||||| || |||||||  ||||||||||||||| || ||||||    
T  34454570 tgcaggggtagattggaaggattagtaacttcaaagacgaaaattcaaatgacctatatttgcagggacgaaggacatatttaagccttaataaaatta 34454472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 187
Target Start/End: Original strand, 12929520 - 12929639
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||| | |||||||||| ||||| |||||||| |||||| || |||    
T  12929520 taattaggaccaaaagtcaaatgattaatatttgcacgggcagattggaaggattagtcacttcagggacggaaattcaaatgaccaatatttgcaggga 12929619  T
Q  168 cgaaaaacatatttaagcct 187  Q
    ||||| ||||||||||||||    
T  12929620 cgaaagacatatttaagcct 12929639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 12931004 - 12931115
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||| |||||||| |||||| || |||    
T  12931004 taattaggaccaaaagtcaaatgattaatatttgcatgggcagattggaaggattagtaacttcagggacgaaaattcaaatgaccaatatttgcaggga 12931103  T
Q  168 cgaaaaacatat 179  Q
    ||||| ||||||    
T  12931104 cgaaagacatat 12931115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 37 - 187
Target Start/End: Complemental strand, 12930921 - 12930771
Alignment:
Q  37 gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcaggga 136  Q
    |||||||||||||||||||| |        |||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||    
T  12930921 gctaatgacagcccacctcaacaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaggggcaaaatggaaggattagtaagttcaggga 12930822  T
Q  137 cgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
     ||||| | |||||||||||| || || ||| ||||  |||||||||||||    
T  12930821 tgaaaaatcaaatgacctataattgcagggatgaaatgcatatttaagcct 12930771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 8 - 188
Target Start/End: Original strand, 5636230 - 5636411
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||| ||| ||||||| | |||||| |||||||||||||||||||| |        ||||||||||||||| ||||||| |||||  ||||||| |    
T  5636230 aatcatcatttgtcacatgggcaccacgttgctaatgacagcccacctcaactaaaaaacctaattaggaccaaatgtcaaataattaaattttgcagtg 5636329  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
     |||||||||||||||||||| |||||||||||||||| |||| || ||||||| ||||||||||| || ||||||| ||||    
T  5636330 gcagattggaaggattagtaacttcagggacgaaaattcaaattacttatatttgcaaggacgaaagacctatttaaacctt 5636411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 27558053 - 27558236
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnnt----ctaattaggaccaaaagtcaaatgattaatatttgc 102  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||||||            |||||||||| |||||||||||||||||||||||||    
T  27558053 aatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaaaaaactaattaggatcaaaagtcaaatgattaatatttgc 27558152  T
Q  103 agggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    |  | || | ||||||||||||||| |||  ||||||||||| ||||||||||||||| || |||||||| || ||||||||||    
T  27558153 aatggcaaaatggaaggattagtaacttcgtggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 27558236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 34454746 - 34454866
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||| ||| |||||||| |||||||||||||||| |||||| |||||||| || |||    
T  34454746 taattagaaccaaaagtcaaatgattaatatttgcaggggcagattgaaagaattagtaacttcagggacgaaaattcaaatgatctatatttgcaggga 34454845  T
Q  168 cgaaaaacatatttaagcctt 188  Q
     ||||  | ||||||||||||    
T  34454846 tgaaagtcctatttaagcctt 34454866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 67 - 188
Target Start/End: Complemental strand, 12928155 - 12928035
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    ||||||||||||||| |||||||||||||||| |||| || |||||||||||||||||||| || ||||||||||||| || || ||||||||| ||  |    
T  12928155 ctaattaggaccaaatgtcaaatgattaatatatgcatgg-cagattggaaggattagtaactttagggacgaaaattcaagtggcctatatttgcagcg 12928057  T
Q  167 acgaaaaacatatttaagcctt 188  Q
    |||||| |||||||||||||||    
T  12928056 acgaaagacatatttaagcctt 12928035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 187
Target Start/End: Complemental strand, 12929406 - 12929286
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    |||||||||||||||||||||||||||||||||||||||| || | ||| |||||||||||||||||||| ||||| | ||||  ||||||||| || ||    
T  12929406 ctaattaggaccaaaagtcaaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatagcctatatttgcaggg 12929307  T
Q  167 acgaaaaacatatttaagcct 187  Q
    | ||||  |||||||||||||    
T  12929306 atgaaatgcatatttaagcct 12929286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 26825904 - 26826016
Alignment:
Q  76 accaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaac 175  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| ||| |||| ||||||||||| ||||||| ||||||| || | |||||| ||    
T  26825904 accaaaagtcaaatgattaatatttgcaggggcagattgaaaggattaataacttcatggacgaaaattcaaatgacatatatttgcaggaacgaaagac 26826003  T
Q  176 atatttaagcctt 188  Q
     ||||||||||||    
T  26826004 ctatttaagcctt 26826016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 5280553 - 5280655
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  ||||||||  |||||||||||| |||||||||||||||| ||||||||||||||| ||||||| ||| || |||||||    
T  5280553 tcaaatgattaatatttgcaatgacagattcaaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacaaaagacctatttaa 5280652  T
Q  184 gcc 186  Q
    |||    
T  5280653 gcc 5280655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 8 - 188
Target Start/End: Complemental strand, 47082026 - 47081845
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||| || |||||| ||| |||||| |||||||||| |||||||||||        ||||||| |||||||| ||||||||||||||||| ||  |    
T  47082026 aatcatcatttaccacattgacaccacgtcgctaatgacaacccacctcagcaaaaaaacctaattaagaccaaaaatcaaatgattaatatttacaatg 47081927  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
     ||||||| |||||||||||| ||||| || ||||||| ||||||| |||||||  | |||||||| || ||||||||||||    
T  47081926 gcagattgaaaggattagtaacttcagagatgaaaattcaaatgacatatatttgaagggacgaaagacctatttaagcctt 47081845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 187
Target Start/End: Complemental strand, 5280388 - 5280271
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacg 169  Q
    ||||||||| ||| |||||| |||||||||| ||| | |||||||||||||||||||| |||||  ||||||||| ||||| ||||||||| || |||||    
T  5280388 attaggaccgaaattcaaattattaatatttacagtggcagattggaaggattagtaacttcagtaacgaaaattcaaatggcctatatttgcagggacg 5280289  T
Q  170 aaaaacatatttaagcct 187  Q
    ||| || |||||||||||    
T  5280288 aaagacttatttaagcct 5280271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 20947295 - 20947196
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||||||||||||||| || | |||||||||||||||||||| |||| ||||||||||| |||||||||||||||  | |||||||| || |||||||    
T  20947295 tcaaatgattaatatttgtagtggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgaagggacgaaagacctatttaa 20947196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 25049438 - 25049544
Alignment:
Q  79 aaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacata 178  Q
    |||||||||||||||||  ||||||| | || ||||||| ||||||||| ||||||||  |||||| |||||||||||||||||| |||||||| || ||    
T  25049438 aaaagtcaaatgattaaattttgcagtggcatattggaaagattagtaacttcagggagaaaaattcaaatgacctatatttacagggacgaaagaccta 25049537  T
Q  179 tttaagc 185  Q
    |||||||    
T  25049538 tttaagc 25049544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 12928305 - 12928422
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||| |||||||||||||||||| |||||||||| | ||||||  |||||||||||| |||| ||||||||||| |||||  |||||||| || |||    
T  12928305 taattagaaccaaaagtcaaatgattgatatttgcagcggcagattaaaaggattagtaacttcaaggacgaaaattcaaatggtctatatttgcaggga 12928404  T
Q  168 cgaaaaacatatttaagc 185  Q
    | ||| || |||||||||    
T  12928405 caaaagacctatttaagc 12928422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 15827900 - 15827756
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||| |||||||||||| |||||||||        |||||||  ||||||||||||||| ||||||||||||| |    
T  15827900 aatcatcacttgccacatgggcaccacgttgctaatgacagctcacctcagcaaaaaaacctaattaaaaccaaaagtcaaatggttaatatttgcagtg 15827801  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatga 151  Q
     ||||||| |||||||| ||| ||||   ||||||||| ||||||    
T  15827800 gcagattgaaaggattaataacttcaaaaacgaaaattcaaatga 15827756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 7159197 - 7159314
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacg 169  Q
    |||||||| |||| |||||||||||||||||||||||  | || ||| |||||||||| |||||| ||||||||| |||||| |||||||| || ||| |    
T  7159197 attaggacgaaaattcaaatgattaatatttgcagggtaaaatggga-ggattagtaacttcaggaacgaaaattcaaatgatctatatttgcagggatg 7159295  T
Q  170 aaaaacatatttaagcctt 188  Q
    ||  |||||||||||||||    
T  7159296 aatgacatatttaagcctt 7159314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 185
Target Start/End: Original strand, 20947398 - 20947577
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntct-aattaggaccaaaagtcaaatgattaatatttgcagg 105  Q
    |||||||| ||||||||||| | |||||| | ||||||||||||||||||||        || ||||| || ||||||| ||||||||||||||| |||     
T  20947398 aatcatcatttgccacatgggcaccacgtcgttaatgacagcccacctcagcaaaaaaaacttaattatgatcaaaagttaaatgattaatatttacagt 20947497  T
Q  106 gacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    |  ||||||||||||||||||| ||||  || ||||||| |||| || ||||||| |||| || ||| ||||||||||||    
T  20947498 ggtagattggaaggattagtaacttcatagatgaaaattcaaataacttatatttgcaagcacaaaagacatatttaagc 20947577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 23191119 - 23191239
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaag- 165  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||  ||||| |||| |||| || ||||||| || |     
T  23191119 ctaattaggaccaaaagtcaaatgattaatatttgcagtggcagattggaagaattagtaaattca-tgacgataattcaaataacatatatttgcaggg 23191217  T
Q  166 -gacgaaaaacatatttaagcc 186  Q
     ||||||| | |||||||||||    
T  23191218 agacgaaagagatatttaagcc 23191239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 47121543 - 47121661
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    |||||||||||||||||||||||||||||  ||||||| |  |||||| ||| |||||||| ||||| |||||||||| |||||  | |||||| || ||    
T  47121543 ctaattaggaccaaaagtcaaatgattaaattttgcagtggtagattgaaagtattagtaacttcagagacgaaaattcaaatggtcaatatttgcaggg 47121642  T
Q  167 acgaaaaacatatttaagc 185  Q
    |||||| || |||||||||    
T  47121643 acgaaagacctatttaagc 47121661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 160
Target Start/End: Complemental strand, 44545774 - 44545621
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | ||| || |||||||||| | |||||||||        ||||||||||||||||||||||| ||||   ||||||| |    
T  44545774 aatcatcacttgccacatgggcaccatgtcgctaatgacaactcacctcagcaaaaaaacctaattaggaccaaaagtcaaataattatattttgcagcg 44545675  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
     ||||| | ||  |||||||| |||||| ||||||||| |||||||||||||||    
T  44545674 gcagatcgaaataattagtaacttcaggaacgaaaattcaaatgacctatattt 44545621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 84 - 198
Target Start/End: Complemental strand, 5636127 - 5636015
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  | || || |||||||||||||| || ||||||||||||| ||||||||||||||| || ||||| || || |||||||    
T  5636127 tcaaatgattaatatttgcaatggcaaat-ggaaggattagtaactttagggacgaaaattcaaatgacctatatttgcagggacg-aatacctatttaa 5636030  T
Q  184 gccttgattaaatta 198  Q
    |||||  ||||||||    
T  5636029 gccttctttaaatta 5636015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 187
Target Start/End: Original strand, 31695598 - 31695715
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacg 169  Q
    ||||||||||||  |||| ||||||| | ||||||||| | | |||||||||||||||||| ||||| |||| || ||||||||||||||| || ||| |    
T  31695598 attaggaccaaatttcaagtgattaacaattgcagggaaaaaatggaaggattagtaagtttagggatgaaatttcaaatgacctatatttgcagggatg 31695697  T
Q  170 aaaaacatatttaagcct 187  Q
    |||  ||||||| |||||    
T  31695698 aaatgcatattttagcct 31695715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 152
Target Start/End: Complemental strand, 35262745 - 35262660
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgac 152  Q
    ||||||| || ||||||||||||||||||  ||||||| | |||||||||||||||||||| ||||| ||| |||||| |||||||    
T  35262745 ctaattatgatcaaaagtcaaatgattaaattttgcagtggcagattggaaggattagtaacttcagagacaaaaattcaaatgac 35262660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 27557950 - 27557862
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaa 172  Q
    ||||||||||||||||||||  | || | |||||| |||| ||| |||| ||||||||||| |||||||||||||||||| ||||||||    
T  27557950 tcaaatgattaatatttgcaatggcaaaatggaagaattattaacttcaaggacgaaaattcaaatgacctatatttacagggacgaaa 27557862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 40022527 - 40022630
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||| ||||||||||||| |||| | |||||||||||||||| ||||||| |||| || |||||| |||||||| || ||| |||| |||||||| |    
T  40022527 tcaaatgcttaatatttgcagtgacaaaatggaaggattagtaagatcagggatgaaatttcaaatga-ctatatttgcagggatgaaatacatatttta 40022625  T
Q  184 gcctt 188  Q
    |||||    
T  40022626 gcctt 40022630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 47121380 - 47121276
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||| |||||||||||||  |  | | ||||||||||  ||| |||||||||||||||||||| ||||||||||||||||||| |||||  |||||||    
T  47121380 tcaaataattaatatttgcaatgggaaaatggaaggattgataacttcagggacgaaaatttaaaagacctatatttacaaggacaaaaaatctatttaa 47121281  T
Q  184 gcctt 188  Q
     ||||    
T  47121280 acctt 47121276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 15827981 - 15827914
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| |||||||||||||||| ||||| ||||||||| || |||||||| |||||||||||||    
T  15827981 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 15827914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 37284209 - 37284107
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| || |||||||| || | ||| |||||||||||| ||||||| ||||| | ||||| |||||| ||||| ||| ||||| |||||||||||    
T  37284209 aaatgattagtaattgcaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacagggatgaaaagcatatttaagc 37284110  T
Q  186 ctt 188  Q
    |||    
T  37284109 ctt 37284107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 7158351 - 7158230
Alignment:
Q  66 tctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaag 165  Q
    ||||||||||||| |   ||||||||||||||||| ||||| || | |||||||||||||||||||| ||| ||||| | ||||| |||||| ||  | |    
T  7158351 tctaattaggaccgattctcaaatgattaatatttacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaatggcctataattgtagg 7158252  T
Q  166 gacgaaaaacatatttaagcct 187  Q
    || ||||  |||||||||||||    
T  7158251 gatgaaatgcatatttaagcct 7158230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 27557972 - 27558039
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| |||| ||||||||||| ||||||||||||||| || |||||||| || ||||||||||    
T  27557972 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 27558039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 183
Target Start/End: Original strand, 39527063 - 39527178
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||  ||||||||||||||||| || |||||||||    || ||||||||||||||| |||||||||||||| ||| |  |  |||||||| |||    
T  39527063 taattagggtcaaaagtcaaatgattagtaattgcagggaagtttttgaaggattagtaagtacagggacgaaaattcaaacggaccctatttacaggga 39527162  T
Q  168 cgaaaaacatatttaa 183  Q
    | ||| ||||||||||    
T  39527163 ctaaacacatatttaa 39527178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 26825890 - 26825824
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  26825890 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaatacctatttaagc 26825824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 34454740 - 34454674
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  34454740 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 34454674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 37289310 - 37289412
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| || |||||||| || | ||| |||||||||||| ||||||| |||||   ||||| |||||| ||||| ||| ||||| |||||||||||    
T  37289310 aaatgattagtaattgcaggggcaaaatgggaggattagtaagctcagggatgaaaaaccaaatggcctataattacagggatgaaaagcatatttaagc 37289409  T
Q  186 ctt 188  Q
    |||    
T  37289410 ctt 37289412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 183
Target Start/End: Original strand, 44545879 - 44545976
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||  |  | | | ||||||||||||| |||||||||||||||| ||||||| | ||||| || |||||||| || |||||||    
T  44545879 aaatgattaatatttgcaatggtaaaattgaaggattagtaacttcagggacgaaaattcaaatgacttgtatttgcatggacgaaagacctatttaa 44545976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 27480745 - 27480849
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||||||||  ||| ||| ||||| | ||| | |||||| ||||| ||| |||||||||||||||    
T  27480745 tcaaatgattagtaattacaggggcaaaatggaaggattagtaaaatcaaggatgaaaaatcaaacggcctataattacagggatgaaaaacatatttaa 27480844  T
Q  184 gcctt 188  Q
    |||||    
T  27480845 gcctt 27480849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 47738979 - 47739055
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatt 144  Q
    ||||||||||||||  | || |||||||||||||||||| || ||||| ||||||||||| | ||||||| ||||||    
T  47738979 taattaggaccaaattttaagtgattaatatttgcaggggcaaattgggaggattagtaaatacagggactaaaatt 47739055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 19980074 - 19980140
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||| ||||||||||| |||||| ||||||||  |||||||||| || |||||||||    
T  19980074 gattagtaacttcaaggacgaaaattcaaatgatctatatttggaaggacgaaagacctatttaagc 19980140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 37563614 - 37563548
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| ||||| ||||||||| || ||| |||| || |||||||||    
T  37563614 gattagtaacttcagggacgaaaattcaaatgccctatatttgcagggatgaaagacttatttaagc 37563548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 187
Target Start/End: Original strand, 4227172 - 4227273
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||| ||||| ||| |||||||| | ||| |||||||||||| ||| ||| ||||| | ||||| |||||| ||||| ||| ||||  |||||||||||    
T  4227172 aaatggttaatttttacagggacaaaatgggaggattagtaagctcaaggatgaaaaatcaaatggcctataattacagggatgaaatgcatatttaagc 4227271  T
Q  186 ct 187  Q
    ||    
T  4227272 ct 4227273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 12929514 - 12929449
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
    ||||||||| |||| ||||||||||| ||||||||||||||| || ||| |||| || ||||||||    
T  12929514 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 12929449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 181
Target Start/End: Complemental strand, 22661459 - 22661362
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattt 181  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||| ||| ||||| | ||| | |||||| ||||| ||| ||||| |||||||    
T  22661459 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcaaggatgaaaaatcaaacggcctataattacagggatgaaaagcatattt 22661362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 43938154 - 43938113
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  43938154 gattagtaacttcagggacgaaaattcaaatgacctatattt 43938113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 47082107 - 47082043
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||| ||| |||||||||||||||| |||||| |||||||| || |||||||| || |||||||    
T  47082107 gattaataacttcagggacgaaaattcaaatgaactatatttgcagggacgaaagacttatttaa 47082043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 47733138 - 47733062
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatt 144  Q
    ||||||||||||||  | || ||||||||||||||||||  | ||||| ||||||||||| | ||||||| ||||||    
T  47733138 taattaggaccaaattttaagtgattaatatttgcaggggtaaattgggaggattagtaattacagggactaaaatt 47733062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 5636150 - 5636205
Alignment:
Q  120 attagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaac 175  Q
    |||||||| |||||||||||||||| ||||||| |||||||  | |||||||||||    
T  5636150 attagtaacttcagggacgaaaattcaaatgacttatatttgaagggacgaaaaac 5636205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 12643200 - 12643098
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||| ||||| |||||||||  | | ||| |||||||||||| |||| || ||||| | ||||| |||||| ||||| ||| ||||  |||||||||||    
T  12643200 aaatggttaatttttgcaggggtaaaatgggaggattagtaagctcagagatgaaaaatcaaatggcctataattacagggatgaaatgcatatttaagc 12643101  T
Q  186 ctt 188  Q
    |||    
T  12643100 ctt 12643098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 19980052 - 19979979
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatat 158  Q
    ||||||||||||||||||||  | || | ||||| ||||||||| |||| ||| ||||||| |||||||||||||    
T  19980052 tcaaatgattaatatttgcaacggcaaaatggaatgattagtaacttca-ggatgaaaattcaaatgacctatat 19979979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 26828575 - 26828501
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||||||||||||||||| |  | | ||||||||||||||  || ||||| ||||||| ||| |||||||||||    
T  26828575 aaatgattaatatttgcagtggtaaaatggaaggattagtacttttagggatgaaaattcaaacgacctatattt 26828501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 40021593 - 40021491
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||| ||||||||||||| | || | | |||| ||||| ||||| | ||| |||| || |||||||||||||||||| ||| ||||  ||||||| |    
T  40021593 tcaaatgtttaatatttgcagtggcaaaatagaagaattagcaagtttatggatgaaatttcaaatgacctatatttacagggatgaaatgcatatttta 40021494  T
Q  184 gcc 186  Q
    |||    
T  40021493 gcc 40021491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 44545838 - 44545788
Alignment:
Q  136 acgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| ||||||||||||||| |||| |||||| || ||||||||||    
T  44545838 acgaaaattcaaatgacctatatttgcaagaacgaaagacctatttaagcc 44545788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 4226225 - 4226124
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||||| ||| ||||| || | |||||||||||||||| ||| ||  ||| | | ||||| |||||| ||||| ||| ||||  |||||||||||    
T  4226225 aaatgattaatttttacaggggcaaaatggaaggattagtaagctcatggttgaagaatcaaatggcctataattacagggatgaaatgcatatttaagc 4226126  T
Q  186 ct 187  Q
    ||    
T  4226125 ct 4226124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 12930998 - 12930933
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
    |||||| || |||| ||||||||||| ||||||||||||||| || ||| |||| || ||||||||    
T  12930998 gattagaaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaacacctatttaag 12930933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 20947317 - 20947358
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||||||| |||| ||||||||||| |||||||||||||||    
T  20947317 gattagtaacttcaaggacgaaaattcaaatgacctatattt 20947358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 26830007 - 26830096
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctata 157  Q
    ||||||||||  ||| | ||||||||||||||||||| | || | ||||||||||||||| |||| | | ||||||| ||| | ||||||    
T  26830007 taattaggactgaaattaaaatgattaatatttgcagtggcaaaatggaaggattagtaacttcatgaatgaaaattaaaacggcctata 26830096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 31694589 - 31694476
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||  |||| ||||||| | ||||| ||| ||| ||| ||||||||||| || ||||| |||| || |||||  |||||||| || |||    
T  31694589 taattaggaccaaatttcaagtgattaacaattgcatggaaagaatgggaggattagtaaatttagggatgaaatttcaaatggactatatttgcaggga 31694490  T
Q  168 cgaaaaacatattt 181  Q
     ||||  |||||||    
T  31694489 tgaaatgcatattt 31694476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 45586631 - 45586590
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||||||| |||| ||||||||||| |||||||||||||||    
T  45586631 gattagtaacttcaaggacgaaaattcaaatgacctatattt 45586590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 47121411 - 47121468
Alignment:
Q  129 ttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    |||||||||||||||| ||||||||||||||| || ||| ||||  | ||||||||||    
T  47121411 ttcagggacgaaaattcaaatgacctatatttgcagggatgaaaggcctatttaagcc 47121468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 1e-56; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 8 - 187
Target Start/End: Complemental strand, 1741566 - 1741386
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||| ||    
T  1741566 aatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaagg 1741467  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
     |||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||||||| ||||||||||||||    
T  1741466 gcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcct 1741386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 8 - 185
Target Start/End: Original strand, 10998078 - 10998256
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||||||       | |||||| ||||||||||||||||||||||||||||||||    
T  10998078 aatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatttaattatgaccaaaagtcaaatgattaatatttgcaggg 10998177  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
     |||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||    
T  10998178 gcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagagacgaaaaacatatttaagc 10998256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 11312921 - 11312733
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgtg-ctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||  | ||||||  ||||||||| |||||||||||       ||||||||||||||||||||||||||||||||||    
T  11312921 ctcgcccaatcatcacttgccacatgagcaccacgtcactaatgacatcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatt 11312822  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||||| |||| || ||||||| |||| |||||||||||||||| |||||||||||||||| | |||||||| |||||||||||||||    
T  11312821 tgcaggggcagactgcaaggattggtaacttcagggacgaaaattcaaatgacctatatttagagggacgaaagacatatttaagcctt 11312733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 8 - 183
Target Start/End: Original strand, 55036874 - 55037050
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||| |||||||||| || ||||||||       ||||||||||||||||| |||||||||||||||||||||||    
T  55036874 aatcatcacttgccacatgggcaccacgtcgctaatgacaaccgacctcagcaaaaaaatctaattaggaccaaaaatcaaatgattaatatttgcaggg 55036973  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
     |||||||||||||||||||| |||| | ||||||||| ||||||||||||||| || |||||||| ||||||||||    
T  55036974 gcagattggaaggattagtaacttcaagaacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 55037050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 40257072 - 40257259
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgtgctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatattt 100  Q
    |||||| |||||||||||||||||||| | ||||||   ||||||||||||||||| |        |||||||||| |||||||||||||||||||||||    
T  40257072 ctcgcccaatcatcacttgccacatgggcaccacgtcgcaatgacagcccacctcaacaaaaatacctaattaggatcaaaagtcaaatgattaatattt 40257171  T
Q  101 gcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    |||||| ||||||| || ||||||||| |||||||||||||||| |||| || |||||||| | ||||||||||||||||||||||||    
T  40257172 gcaggggcagattgaaatgattagtaatttcagggacgaaaattcaaataacttatatttatagggacgaaaaacatatttaagcctt 40257259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 10749436 - 10749317
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||| |||||||||||||||||| |||    
T  10749436 taattaggaccaaaagtcaaatgattaatatttgcagggatagattagaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaggga 10749337  T
Q  168 cgaaaaacatatttaagcct 187  Q
    ||||| || |||||||||||    
T  10749336 cgaaagacctatttaagcct 10749317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 51279417 - 51279229
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||||| ||||||||||| ||||||| ||        ||||||||||| |||||||||||||||||||||    
T  51279417 ctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagtccacctcggcaaaaaaacctaattaggactaaaagtcaaatgattaatatt 51279318  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||||| || |||| || ||||||||| ||| |||||||||||| |||| |||||||||| || |||||||| |||||||||||||||    
T  51279317 tgcaggggcaaattgaaatgattagtaacttctgggacgaaaattcaaataacctatatttgcagggacgaaagacatatttaagcctt 51279229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 33458183 - 33458301
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||| |||| ||||||||||||||| || ||    
T  33458183 ctaattaggaccaaaagtcaaatgattaatatttgcagtgacagattagaaggattagtaacttcagggacgacaattcaaatgacctatatttgcaggg 33458282  T
Q  167 acgaaaaacatatttaagc 185  Q
    |||||| || |||||||||    
T  33458283 acgaaagacctatttaagc 33458301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 184
Target Start/End: Original strand, 53037226 - 53037409
Alignment:
Q  2 tcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatattt 100  Q
    ||||| ||| |||||||||||||||| | |||||| ||||||| |||||||||| |||        ||||||||||||||||||||||||||||||||||    
T  53037226 tcgcccaattatcacttgccacatgggcaccacgttgctaatggcagcccaccttagcaaaaaaacctaattaggaccaaaagtcaaatgattaatattt 53037325  T
Q  101 gcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
    |||||| ||||||| |||||| ||||| |  ||||||||||||| ||||||||||||||||||  ||||||| | |||||||||    
T  53037326 gcaggggcagattgaaaggatcagtaactgtagggacgaaaattcaaatgacctatatttacagagacgaaagatatatttaag 53037409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 10749663 - 10749781
Alignment:
Q  69 aattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggac 168  Q
    ||||| |||||||||||||||||||||||||||| | | |||||||||| ||||||||| |||||||||||||||||||||||||||||||| || ||||    
T  10749663 aattatgaccaaaagtcaaatgattaatatttgctgaggcagattggaaagattagtaacttcagggacgaaaatttaaatgacctatatttgcagggac 10749762  T
Q  169 gaaaaacatatttaagcct 187  Q
    |||| ||||||| ||||||    
T  10749763 gaaagacatattcaagcct 10749781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 30804113 - 30804231
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||| ||||||  |||||||| | ||    
T  30804113 ctaattaggaccaaaagtcaaatgattaatatttgcagtgacagattggaaggattagtaacttcaggaacgaaaattcaaatgatatatatttaaaggg 30804212  T
Q  167 acgaaaaacatatttaagc 185  Q
    |||||| || |||||||||    
T  30804213 acgaaatacttatttaagc 30804231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 40256992 - 40256879
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||||||||||||||||||||||||||||| || || ||||||||||||||||| |||||||||||||||| |||| |||||||||| || |||    
T  40256992 taattaggaccaaaagtcaaatgattaatatttgcaagggcatattggaaggattagtaacttcagggacgaaaattcaaataacctatatttgcatgga 40256893  T
Q  168 cgaaaaacatattt 181  Q
    ||||| || |||||    
T  40256892 cgaaagacctattt 40256879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 183
Target Start/End: Complemental strand, 55036787 - 55036672
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||| |||||| | ||||||| ||||||||||||||| || |||    
T  55036787 taattaggaccaaaggttaaatgattaatatttgcaggggcagattggaaggattagtaacttcaggaatgaaaattcaaatgacctatatttgcaggga 55036688  T
Q  168 cgaaaaacatatttaa 183  Q
    ||||| || |||||||    
T  55036687 cgaaagacctatttaa 55036672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 22129124 - 22129005
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||| ||||  |||||||||||  |||    
T  22129124 taattaggacgaaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagtgacgaaaattcaaatagcctatatttacgggga 22129025  T
Q  168 cgaaaaacatatttaagcct 187  Q
     |||| || |||||||||||    
T  22129024 tgaaagacctatttaagcct 22129005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 53037145 - 53037027
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||| || |||| ||||||||| ||||||||||||||  | ||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||    
T  53037145 taattatgatcaaatgtcaaatgactaatatttgcaggggtatattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaggga 53037046  T
Q  168 cgaaaaacatatttaagcc 186  Q
     |||| || ||||||||||    
T  53037045 tgaaagacttatttaagcc 53037027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 67 - 196
Target Start/End: Complemental strand, 46670367 - 46670238
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    |||||||||||||||||||||||||||||  ||||||| |  ||||||||||||||||||| |||| ||||| ||||| ||||||||||||||| || ||    
T  46670367 ctaattaggaccaaaagtcaaatgattaaattttgcagtggtagattggaaggattagtaaattcaaggacggaaattcaaatgacctatatttgcaggg 46670268  T
Q  167 acgaaaaacatatttaagccttgattaaat 196  Q
    || ||| || |||||||||||  |||||||    
T  46670267 acaaaagacttatttaagcctaaattaaat 46670238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 10997992 - 10997878
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||| ||||||||||||||||||||||| ||||||   ||||||||||||||||| |||||||||||||||| ||||||||| ||||| || | |    
T  10997992 taattaggatcaaaagtcaaatgattaatatttacaggga---attggaaggattagtaacttcagggacgaaaattcaaatgacctgtatttgcaggaa 10997896  T
Q  168 cgaaaaacatatttaagc 185  Q
    | ||| ||||||||||||    
T  10997895 caaaatacatatttaagc 10997878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 68 - 183
Target Start/End: Original strand, 21300399 - 21300514
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||| |||||||||||||||||||||||| |||||||||| || |||||||||||| ||||| |||||||||| |||| || ||||||| || |||    
T  21300399 taattagggccaaaagtcaaatgattaatatttacagggacagactgaaaggattagtaacttcagagacgaaaattcaaataacatatatttgcaggga 21300498  T
Q  168 cgaaaaacatatttaa 183  Q
    ||||| || |||||||    
T  21300499 cgaaagacctatttaa 21300514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 133
Target Start/End: Original strand, 10749523 - 10749650
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnn-tctaattaggaccaaaagtcaaatgattaatatttgcagg 105  Q
    |||||||||||||||||||||| | |||| |||||||||| |||||||||||        || |||||||||||||||||||||||||||||||||| ||    
T  10749523 aatcatcacttgccacatggacactacgtcgctaatgacaacccacctcagcaaaaaaaatccaattaggaccaaaagtcaaatgattaatatttgctgg 10749622  T
Q  106 gacagattggaaggattagtaagttcag 133  Q
    | |||||||||||||||||||| |||||    
T  10749623 ggcagattggaaggattagtaacttcag 10749650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 155
Target Start/End: Original strand, 22129274 - 22129362
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgaccta 155  Q
    ||||||||||||||||||||||| |||||||||||||| | || ||| ||||||||||||| |||||||||||||||| ||||||||||    
T  22129274 ctaattaggaccaaaagtcaaattattaatatttgcagaggcaaatttgaaggattagtaacttcagggacgaaaattcaaatgaccta 22129362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 38642816 - 38642632
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| | |||||||||||||||||| | |||| | ||||||||||||| ||||||||        |||||||||||||||||| ||||||||||  ||    
T  38642816 ctcgcccactcatcacttgccacatgggcaccacatcgctaatgacagcc-acctcagccaaaaaacctaattaggaccaaaagtgaaatgattaaattt 38642718  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||| |  | |||||||||||| |||| |||||||||  ||||||||||||| ||||||| || |||||||| || |||||||||    
T  38642717 tgcagtggtatattggaaggattggtaacttcagggacagaaatttaaatgacttatatttgcatggacgaaatacctatttaagc 38642632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 33989284 - 33989401
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    |||||||||||||||||||||||||||||||| || || |||| ||||||||||||| ||| |||| ||||||||||| ||||||  ||||||| ||       
T  33989284 ctaattaggaccaaaagtcaaatgattaatatctgtagtgacaaattggaaggattactaacttcatggacgaaaattcaaatgatatatatttgcatct 33989383  T
Q  167 acgaaaaacatatttaag 184  Q
    |||||| |||||||||||    
T  33989384 acgaaagacatatttaag 33989401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 24576560 - 24576677
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    |||||||||||||||| ||||||||||||||||||||  | |||||||||||||||||||| ||||  || ||||||| || |||||  |||||||| ||    
T  24576560 ctaattaggaccaaaattcaaatgattaatatttgcactggcagattggaaggattagtaatttcaaagatgaaaattcaactgacc--tatttacaggg 24576657  T
Q  167 acgaaaaacatatttaagcc 186  Q
    |||||| || ||||||||||    
T  24576658 acgaaagacctatttaagcc 24576677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 30890405 - 30890593
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| ||||||  |||||||||||| | |||||  |||||||||||||||||||||         | | ||||||| |||||||||||||||||  ||    
T  30890405 ctcgcccaatcatatcttgccacatgggcaccacgccgctaatgacagcccacctcagaaaaaaaaaccatttaggacaaaaagtcaaatgattaaattt 30890504  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||| | ||||||| || ||||||||| |||||||| ||||||| ||||||||||||||||||   |||||| || ||||||| ||||    
T  30890505 tgcagtggcagattgaaaagattagtaacttcagggatgaaaattcaaatgacctatatttacagaaacgaaagacctatttaaacctt 30890593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 28310527 - 28310380
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    ||||||||||||||||||||   |||||| ||||||||||||||||||||||        |||||||| ||||||||||||||||||||  ||||||| |    
T  28310527 aatcatcacttgccacatgggaaccacgtcgctaatgacagcccacctcagcaaaaaaacctaattagaaccaaaagtcaaatgattaaattttgcagtg 28310428  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacct 154  Q
      | | ||||||||||||||| || ||||||| ||||| |||||||||    
T  28310427 gaaaactggaaggattagtaactttagggacggaaattcaaatgacct 28310380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 184
Target Start/End: Complemental strand, 30803948 - 30803848
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||| |||||||||||||||| ||||||||||||| |||||||| ||||| |||||||||| |||||||||||| ||  | |||||||| || |||||||    
T  30803948 tcaattgattaatatttgcagtgacagattggaagaattagtaacttcagagacgaaaattcaaatgacctatagttgaagggacgaaagacctatttaa 30803849  T
Q  184 g 184  Q
    |    
T  30803848 g 30803848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 11313001 - 11313083
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatga 151  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||| ||||  |||||||||| ||||||    
T  11313001 taattaggaccaaaagtcaaatgattagtatttgcaggggcagattagaaggattagtaacttca-tgacgaaaattcaaatga 11313083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 30654663 - 30654484
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    ||||||||||||||| |||  | |||||| |||||||||| | |||||||||        ||||||||||||||||||||||| |||||||||| |||      
T  30654663 aatcatcacttgccatatgagcaccacgttgctaatgacaactcacctcagctaaaaagactaattaggaccaaaagtcaaattattaatatttacagta 30654564  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
     ||||||||||  |||||||| |||| |||||||| || ||| ||| ||||||| || ||| |||| || ||||||||||    
T  30654563 gcagattggaaatattagtaacttcaaggacgaaatttcaaacgacttatatttgcagggatgaaagacttatttaagcc 30654484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 21300312 - 21300192
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||| | ||||||||||| ||||||||||        ||||||||||| |||| |||||||||||||||||||| ||    
T  21300312 aatcatcacttgccacatgggcaccacatcgctaatgacagtccacctcagcaaaaaaacctaattaggacaaaaaatcaaatgattaatatttgcatgg 21300213  T
Q  107 acagattggaaggattagtaa 127  Q
     ||||| | ||||||||||||    
T  21300212 gcagatagaaaggattagtaa 21300192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 22736688 - 22736791
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | ||| |||||||||||| ||||||| ||||| | |||||||||||| ||||| ||| |||||||||||||||    
T  22736688 tcaaatgattagtaattacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatgacctataattacagggatgaaaaacatatttaa 22736787  T
Q  184 gcct 187  Q
    ||||    
T  22736788 gcct 22736791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 187
Target Start/End: Original strand, 32717105 - 32717206
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||||| ||| ||||| || | |||||||||||||||||| ||||| ||||| | |||||||||||| ||||| ||| ||||  |||||||||||    
T  32717105 aaatgattaatttttacaggggcaaaatggaaggattagtaagtttagggatgaaaaatcaaatgacctataattacagggatgaaatgcatatttaagc 32717204  T
Q  186 ct 187  Q
    ||    
T  32717205 ct 32717206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 35432615 - 35432720
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    ||||||| ||| ||||||||||| |||||||||||||| | |||||||||||||||| ||| || | | ||||||||| |||| || |||||||||| |     
T  35432615 ctaattatgacaaaaagtcaaataattaatatttgcagtggcagattggaaggattaataactttatgaacgaaaattcaaataacttatatttacagga 35432714  T
Q  167 acgaaa 172  Q
    ||||||    
T  35432715 acgaaa 35432720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 46670539 - 46670616
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttaca 163  Q
    ||||||||||||||||||  |||| | |||||| |||||||| |||||||| ||||||| ||||||||||||||||||    
T  46670539 aaatgattaatatttgcaatgacaaaatggaagaattagtaacttcagggatgaaaattcaaatgacctatatttaca 46670616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 1757302 - 1757410
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||| ||| ||||| | ||| | |||||| ||||| ||| ||||| |||||||||    
T  1757302 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattacagggatgaaaatcatatttaa 1757401  T
Q  184 gccttgatt 192  Q
    |||||||||    
T  1757402 gccttgatt 1757410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 30654762 - 30654865
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||||||||||||| |||| | |||||| ||||||| ||||| ||||  |||||||||| ||||||||||||||| || |||||||| || |||| ||    
T  30654762 tcaaatgattaatatt-gcagtggcagattagaaggatcagtaacttcatagacgaaaattcaaatgacctatatttgcagggacgaaagacctattaaa 30654860  T
Q  184 gcctt 188  Q
    |||||    
T  30654861 gcctt 30654865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 33458018 - 33457914
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||| |||| |||  |||||||||||| ||||| | | |||||| |||||| | ||||||||| |||||||| || |||||||    
T  33458018 tcaaatgattaatatttgcagtgacatattaaaaggattagtaacttcagaggcaaaaattcaaatgatccatatttacatggacgaaagacctatttaa 33457919  T
Q  184 gcctt 188  Q
     ||||    
T  33457918 acctt 33457914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 48189097 - 48189201
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||||||||| ||||||| ||||| | ||| | |||||| ||||||||| ||||| |||||||||    
T  48189097 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagctcagggatgaaaaatcaaacggcctataattacaaggatgaaaagcatatttaa 48189196  T
Q  184 gcctt 188  Q
    |||||    
T  48189197 gcctt 48189201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 24576414 - 24576481
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    |||| |||| |||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||||    
T  24576414 gatttgtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaaaacttatttaagcc 24576481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 30803970 - 30804037
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| ||| |||||||||||| ||||||||||||||| || ||||||||||| ||||||||||    
T  30803970 gattagtaacttccgggacgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaagcc 30804037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 33989116 - 33989014
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||| |||||||||||||| | |||||||||||||||||||| || ||| ||||||||| ||| |  |||||||| | ||||||||| || |||||||    
T  33989116 tcaaataattaatatttgcagtggcagattggaaggattagtaacttaaggtacgaaaattcaaaaggtctatatttgc-aggacgaaatacctatttaa 33989018  T
Q  184 gcct 187  Q
    ||||    
T  33989017 gcct 33989014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 1756652 - 1756550
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||| ||| ||||| | ||| | |||||| ||||||||| |||||| ||||||||    
T  1756652 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattacaaggatgaaaaatatatttaa 1756553  T
Q  184 gcc 186  Q
    |||    
T  1756552 gcc 1756550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 11312995 - 11312929
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| ||||||||||||||| |||||| |||| || |||||||||    
T  11312995 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggatgaaagacttatttaagc 11312929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 22129130 - 22129196
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| |||||||||||||||||| ||| |||| || |||||||||    
T  22129130 gattagtaacttcagggacgaaaattcaaatgacctatatttacagggatgaaagacttatttaagc 22129196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 45279282 - 45279384
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||||||| ||||| | ||| | |||||| ||||| ||| ||||| |||||||||    
T  45279282 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 45279381  T
Q  184 gcc 186  Q
    |||    
T  45279382 gcc 45279384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 53037151 - 53037217
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| ||||||||||||||| |||||| |||| || |||||||||    
T  53037151 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggatgaaagacctatttaagc 53037217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 84 - 181
Target Start/End: Complemental strand, 48188480 - 48188383
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattt 181  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||||||| ||||| | ||| | |||||| ||||| ||| |||||||||||||    
T  48188480 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaaacatattt 48188383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 2944664 - 2944767
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||| ||||||||||||||||||| ||||| | ||| | |||||| ||||| ||| ||||| |||||||||    
T  2944664 tcaaatgattagtaattacaggggcaaaatggatggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 2944763  T
Q  184 gcct 187  Q
    ||||    
T  2944764 gcct 2944767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 33989138 - 33989204
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| |||||| ||||||||| ||||||||||||||| || ||||||||||| ||||||||||    
T  33989138 gattagtaacttcagg-acgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaagcc 33989204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 10749442 - 10749508
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||||||||||||||||||| || ||| |||| || |||| ||||    
T  10749442 gattagtaacttcagggacgaaaatttaaatgacctatatttgcagggatgaaagacctattaaagc 10749508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 11026630 - 11026732
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||| ||||||||||||| ||||| | ||| | |||||| ||||| ||| ||||| |||||||||    
T  11026630 tcaaatgattagtaattacaggggcaaaatggaaggattggtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 11026729  T
Q  184 gcc 186  Q
    |||    
T  11026730 gcc 11026732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 43105303 - 43105233
Alignment:
Q  116 aaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||||||||||||||| ||||| | ||| | |||||| ||||||||| | ||||||||||||||||    
T  43105303 aaggattagtaagttcagggatgaaaaatcaaacggcctataattacaaggatgtaaaacatatttaagcc 43105233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 55036793 - 55036859
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  55036793 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 55036859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 24576366 - 24576291
Alignment:
Q  108 cagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||| ||||||||||||| |||| ||||||||||| ||||| | ||||||| || |||||||| || |||||||    
T  24576366 cagattagaaggattagtaatttcatggacgaaaattcaaatggcttatatttgcagggacgaaagacctatttaa 24576291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 28310630 - 28310733
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  | || | ||||| ||||||||| || |||| |||| ||| ||||||||||||||| |  | |||||| || |||||||    
T  28310630 tcaaatgattaatatttgcaatggcaaaatggaaagattagtaactttagggtcgaagattcaaatgacctatatttgctggaacgaaagacctatttaa 28310729  T
Q  184 gcct 187  Q
    ||||    
T  28310730 gcct 28310733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 1741647 - 1741581
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| | ||||||||||||||||| |||||||||||| || ||| |||| || |||||||||    
T  1741647 gattagtaactccagggacgaaaatttaattgacctatattttcagggatgaaagacctatttaagc 1741581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 21300393 - 21300327
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||| ||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  21300393 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 21300327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 20975049 - 20974976
Alignment:
Q  71 ttaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatt 144  Q
    |||||||||||| |||||||||||||| ||||||| | | |  || ||||||||||||| || |||||||||||    
T  20975049 ttaggaccaaaactcaaatgattaataattgcaggaaaaaaaagggaggattagtaagtacatggacgaaaatt 20974976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 21255813 - 21255914
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||| ||  | || | |||||| |||||||| || | ||||||||||| |||||| |||||||| || | |||||| || |||||||    
T  21255813 tcaaatgattaatatttacaatggcaaaatggaagcattagtaactttatggacgaaaattcaaatgatctatatttgcaggaacgaaagacttatttaa 21255912  T
Q  184 gc 185  Q
    ||    
T  21255913 gc 21255914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 43105832 - 43105929
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattt 181  Q
    ||||||||||| || || ||||| || | || ||||||||||||||||||||| ||||| | ||| | |||||| ||||| ||| ||||||| |||||    
T  43105832 tcaaatgattagtaattacaggggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaaacgtattt 43105929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 181
Target Start/End: Complemental strand, 44476151 - 44476054
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattt 181  Q
    ||||||||||| || || | ||| || | ||| |||||||||||||||||||| ||||| | ||||| || ||| ||||| ||| |||||||||||||    
T  44476151 tcaaatgattagtaattacgggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcccataattacagggatgaaaaacatattt 44476054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 181
Target Start/End: Complemental strand, 45278646 - 45278549
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattt 181  Q
    ||||||||||| || || ||||| || | ||||||||||||||| |||||||| ||||| | ||| | |||||| ||||| ||| ||||| |||||||    
T  45278646 tcaaatgattagtaattacaggggcaaaatggaaggattagtaaattcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatattt 45278549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 51279490 - 51279449
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  51279490 gattagtaacttcagggacgaaaattcaaatgacctatattt 51279449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 51279541 - 51279598
Alignment:
Q  129 ttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    |||| ||||||||||| |||||||||||||||||||||||| || |  ||||||||||    
T  51279541 ttcaaggacgaaaattcaaatgacctatatttacaaggacggaagatttatttaagcc 51279598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 29193024 - 29193095
Alignment:
Q  117 aggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    |||||||||||| ||||||| ||||| | ||||| |||||| ||||| ||| ||||  ||||||||||||||    
T  29193024 aggattagtaagctcagggatgaaaaatcaaatggcctataattacagggatgaaatgcatatttaagcctt 29193095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 29192135 - 29192033
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||||| ||| ||||| || |  ||||||||||||||| ||||| | ||||| | ||||| |||||| ||||| ||| ||||  ||||||| |||    
T  29192135 aaatgattaatttttacaggggcaaaacggaaggattagtaagctcaggaatgaaaaatcaaatggcctataattacagggatgaaatgcatatttcagc 29192036  T
Q  186 ctt 188  Q
    |||    
T  29192035 ctt 29192033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 51279496 - 51279534
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  51279496 taattatgaccaaaagtcaaatgattaatatttacaggg 51279534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 188
Target Start/End: Complemental strand, 49724 - 49647
Alignment:
Q  111 attggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    |||||||| |||||||| ||||||||||||| || ||||  | ||||||| || |||| ||| || ||||||||||||    
T  49724 attggaagaattagtaatttcagggacgaaatttcaaatagcttatatttgcagggacaaaatacctatttaagcctt 49647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 173
Target Start/End: Complemental strand, 30890309 - 30890220
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaa 173  Q
    ||||||||||||||||| ||  | || | | ||| ||||||||| ||||| || ||||||| |||||| ||||||||| | |||||||||    
T  30890309 tcaaatgattaatatttacaatggcaaaatagaaagattagtaacttcagagatgaaaattcaaatgatctatatttatagggacgaaaa 30890220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 30890331 - 30890372
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||||||| |||||||||||||||| ||||||| |||||||    
T  30890331 gattagtaacttcagggacgaaaattcaaatgacttatattt 30890372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 35432461 - 35432404
Alignment:
Q  131 cagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    |||||||||||||| |||||  |||||||| || |||||||| || ||||||||||||    
T  35432461 cagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagcctt 35432404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 33458040 - 33458104
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||| || || |||||||||| |||||||||||||||  | |||||||| || |||||||    
T  33458040 gattagtaactttagagacgaaaattcaaatgacctatatttgtagggacgaaagacctatttaa 33458104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 40256998 - 40257062
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||| || |||||| ||||||||| ||||||||||||||| || ||| |||| || |||||||    
T  40256998 gattagcaacttcaggaacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 40257062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 5e-56; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 32052410 - 32052223
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| ||| ||| |||||||||||| | |||||| |||||||||||||||||| |||       ||||||||||| ||||||||||||||||||||||    
T  32052410 ctcgcccaatgatcgcttgccacatgggcaccacgtcgctaatgacagcccaccttagcaaaaaaatctaattaggatcaaaagtcaaatgattaatatt 32052311  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
    ||||||| | |||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  32052310 tgcaggggcggattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaaaacatatttaagcct 32052223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 8 - 187
Target Start/End: Original strand, 25253291 - 25253471
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    ||||||||||||||||||||   |||||| ||||||||||||||||||||||       ||||||||||||||||||||||||||||| |||||||| ||    
T  25253291 aatcatcacttgccacatgggtaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattagtatttgcaagg 25253390  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
     |||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||||||| ||||||||||||||    
T  25253391 gcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcct 25253471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 8 - 187
Target Start/End: Original strand, 25317082 - 25317262
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    ||||||||||||||||||||   |||||| ||||||||||||||||||||||       ||||||||||||||||||||||||||||| |||||||| ||    
T  25317082 aatcatcacttgccacatgggtaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattagtatttgcaagg 25317181  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
     |||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||||||| ||||||||||||||    
T  25317182 gcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcct 25317262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 33735499 - 33735312
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||||| |||||| |||||||||| |||||||||||        |||||||| ||||||||||||||||||||||||    
T  33735499 ctcgcccaatcatcacttgccacatggacaccacgtcgctaatgacatcccacctcagcaaaaaaacctaattagaaccaaaagtcaaatgattaatatt 33735400  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
    |||||||||||||||||||||||||||| |||||||||||||| | ||||| |||||||||  | |||||||| ||||||||||||||    
T  33735399 tgcagggacagattggaaggattagtaatttcagggacgaaaaatcaaatggcctatatttgtagggacgaaagacatatttaagcct 33735312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 13064607 - 13064793
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||| ||||||| | |||||| ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  13064607 ctcgcccaatcatcacttgtcacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatt 13064706  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||| |||||||||||||||||||| || || |||||||||| ||||||| ||||||| || |||||||| |||||||||||||    
T  13064707 tgcaggggcagattggaaggattagtaactttagagacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaagcc 13064793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 12990986 - 12991172
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||| ||||||| | |||||| ||||||||||||||||||||||       ||||||||||| ||||||||||||||||||||||    
T  12990986 ctcgcccaatcatcacttgtcacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggatcaaaagtcaaatgattaatatt 12991085  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    |||||||  ||||||||||||||||||| ||||| |||||||||| ||||||| ||||||| || |||||||| |||||||||||||    
T  12991086 tgcaggggtagattggaaggattagtaacttcagagacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaagcc 12991172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 32052490 - 32052610
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||    
T  32052490 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaggga 32052589  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| |||||||||||||||    
T  32052590 cgaaagacatatttaagcctt 32052610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 37945112 - 37944993
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  37945112 taattaggaccaaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaagga 37945013  T
Q  168 cgaaaaacatatttaagcct 187  Q
    ||||| || |||||||||||    
T  37945012 cgaaagacctatttaagcct 37944993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 33735579 - 33735699
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||    
T  33735579 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaggga 33735678  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| || ||||||||||||    
T  33735679 cgaaagacctatttaagcctt 33735699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 8 - 188
Target Start/End: Original strand, 37945199 - 37945379
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||||| |       |||||||| || |||||||||||||||||||||||||| ||    
T  37945199 aatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcaacaaaaaaatctaattatgatcaaaagtcaaatgattaatatttgcaagg 37945298  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
     ||||||| |||||||||||| |||||||||||||| || |||||||||||||| || |||||||| |||||||||||||||    
T  37945299 gcagattgaaaggattagtaacttcagggacgaaaa-ttcaatgacctatatttgcagggacgaaagacatatttaagcctt 37945379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 14745566 - 14745447
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| ||||||||||||||| || |||    
T  14745566 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctatatttgcaggga 14745467  T
Q  168 cgaaaaacatatttaagcct 187  Q
    ||||| || |||||||||||    
T  14745466 cgaaagacctatttaagcct 14745447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 8 - 184
Target Start/End: Original strand, 20704918 - 20705096
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    ||||||||||||| |||||| | |||||| ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||    
T  20704918 aatcatcacttgctacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgcaggg 20705017  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacc--tatatttacaaggacgaaaaacatatttaag 184  Q
     ||||||| || ||||||||| ||||  |||||||||| ||||||||  |||||||||| |||||||| |||||||||||    
T  20705018 -cagattgaaaagattagtaacttcaaagacgaaaattcaaatgacctatatatttacagggacgaaagacatatttaag 20705096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 25253204 - 25253087
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||| |||||| |||||||| || |||    
T  25253204 taattaggaccaaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactatatttgcaggga 25253105  T
Q  168 cgaaaaacatatttaagc 185  Q
     |||| ||||||||||||    
T  25253104 tgaaagacatatttaagc 25253087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 25316994 - 25316877
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||| |||||| |||||||| || |||    
T  25316994 taattaggaccaaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactatatttgcaggga 25316895  T
Q  168 cgaaaaacatatttaagc 185  Q
     |||| ||||||||||||    
T  25316894 tgaaagacatatttaagc 25316877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 22533576 - 22533388
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | ||| || ||||||||||||||||||||||        ||||||| |||||||||| ||||||||||  ||    
T  22533576 ctcgcccaatcatcacttgccacatgggcaccatgtcgctaatgacagcccacctcagcaaaaaaacctaattatgaccaaaagttaaatgattaaattt 22533477  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    || || | |||||||||| ||||| ||| |||||||||||||||| ||||||||||||||| ||||| ||||| || ||||||||||||    
T  22533476 tgtagtggcagattggaatgattaataacttcagggacgaaaattcaaatgacctatatttgcaagggcgaaagacctatttaagcctt 22533388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 6421801 - 6421625
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    ||||||||| |||||||||| | |||||| ||||||||||  ||||||||||        ||||||||||||||||||||||||||||||||||| ||||    
T  6421801 aatcatcacatgccacatgggcaccacgtcgctaatgacaatccacctcagcagaaaaacctaattaggaccaaaagtcaaatgattaatatttgtaggg 6421702  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
     ||||||| || ||||||||| |||| |||| |||||| ||||||| ||||||| || |||||||| ||||||||||    
T  6421701 gcagattgaaaagattagtaacttcaaggacaaaaattcaaatgacatatatttgcagggacgaaagacatatttaa 6421625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 67 - 187
Target Start/End: Complemental strand, 7015627 - 7015507
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| |||| ||| ||||||| ||||| ||||||||| || ||    
T  7015627 ctaattaggaccaaaagtcaaatgattaatatttgcagtggcagattggaatgattagtaacttcatggatgaaaattcaaatggcctatatttgcaggg 7015528  T
Q  167 acgaaaaacatatttaagcct 187  Q
    |||||| || |||||||||||    
T  7015527 acgaaagacctatttaagcct 7015507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 71 - 188
Target Start/End: Original strand, 6421891 - 6422008
Alignment:
Q  71 ttaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacga 170  Q
    |||||||||||||||||||||||||||||||||||| || |||| |||||||||||| |||||||||||||||| ||||||| ||||||| || || |||    
T  6421891 ttaggaccaaaagtcaaatgattaatatttgcaggggcatattgaaaggattagtaatttcagggacgaaaattcaaatgacttatatttgcaggggcga 6421990  T
Q  171 aaaacatatttaagcctt 188  Q
    || || ||||||| ||||    
T  6421991 aagacctatttaaacctt 6422008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 71 - 179
Target Start/End: Original strand, 14745582 - 14745690
Alignment:
Q  71 ttaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacga 170  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| |||||||||| ||||| |||||||||  | ||||||    
T  14745582 ttaggaccaaaagtcaaatgattaatatttgcaagggcagattggaaggattagtaacttcagcgacgaaaattcaaatggcctatatttgtagggacga 14745681  T
Q  171 aaaacatat 179  Q
    || ||||||    
T  14745682 aagacatat 14745690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 8 - 160
Target Start/End: Complemental strand, 41339533 - 41339380
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||||| |||||| ||| |||||||| |||||||||        |||||||||||||||||||||||||| ||  ||||||| |    
T  41339533 aatcatcacttgccacatggacaccacgtcgctgatgacagctcacctcagcaaaaaaacctaattaggaccaaaagtcaaatgataaaattttgcagtg 41339434  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
     |||||||||| |||||| || |||||||||||||||| ||||||| |||||||    
T  41339433 gcagattggaaagattagcaacttcagggacgaaaattcaaatgacttatattt 41339380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 7015791 - 7015893
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||| ||| ||| ||||||| ||||||||||| || |||||||    
T  7015791 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaacgacttatatttgcaaggacgaaagacctatttaa 7015890  T
Q  184 gcc 186  Q
    |||    
T  7015891 gcc 7015893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 18013817 - 18013981
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||| ||||||  | |||||| ||||||||||| ||||||||||        |||||||  |||||||||||||| |||||||||||||| |    
T  18013817 aatcatcacttgtcacatgcgcaccacgtcgctaatgacagtccacctcagcaaaaaaacctaattaaaaccaaaagtcaaataattaatatttgcagag 18013916  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaa 172  Q
     ||||||| ||||||| |||| |||| ||||||||||||||||| ||||||||| || ||||||||    
T  18013917 gcagattgaaaggattggtaacttca-ggacgaaaatttaaatggcctatatttgcagggacgaaa 18013981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 159
Target Start/End: Complemental strand, 18013722 - 18013639
Alignment:
Q  76 accaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatt 159  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  18013722 accaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcactgacgaaaattcaaatgacctatatt 18013639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 18934979 - 18935099
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    |||||||  ||||||||||||||||||||  ||||||| | || ||| ||||||||||||| |||||||||||||| | |||||||||||||||||| ||    
T  18934979 ctaattataaccaaaagtcaaatgattaaattttgcagtggcaaattagaaggattagtaatttcagggacgaaaa-tcaaatgacctatatttacaggg 18935077  T
Q  167 acgaaaaacatatttaagcctt 188  Q
    || |||||| ||||||| ||||    
T  18935078 acaaaaaacctatttaaacctt 18935099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 27753665 - 27753480
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntc-taattaggaccaaaagtcaaatgattaatat 98  Q
    |||||| |||||||||||||||||||| | |||||| |||||||||| ||||||||| |        | || |||  | |||||||||||||||||||||    
T  27753665 ctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacaacccacctcaccaaaaaaaacctatttataatcaaaagtcaaatgattaatat 27753566  T
Q  99 ttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    |||||| | ||| |||||||||||||||| |||| ||||||||| || |||||||||||||| || |||||||| || || ||||||    
T  27753565 ttgcagtggcagtttggaaggattagtaacttcatggacgaaaa-ttcaatgacctatatttgcagggacgaaagacctacttaagc 27753480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 14744712 - 14744832
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||| |||| ||||||||||||||||||||||| || | ||| |||||||||||||||||||| ||||| | ||||||| |||| || || |||    
T  14744712 taattaggacgaaaattcaaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatgacatataattgcaggga 14744811  T
Q  168 cgaaaaacatatttaagcctt 188  Q
     ||||  ||||||||||||||    
T  14744812 tgaaatgcatatttaagcctt 14744832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 22024152 - 22024256
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||| | || ||||||||||||||||| || || |||||||||| ||||||||||||||| ||  ||||||| || |||||||    
T  22024152 tcaaatgattaatatttgcagtggcaaattggaaggattagtaacttaagtgacgaaaattcaaatgacctatatttgcagagacgaaagacgtatttaa 22024251  T
Q  184 gcctt 188  Q
    |||||    
T  22024252 gcctt 22024256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 8323254 - 8323440
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| ||||||||||||||||||   | |||||| | |||||| |||||||||||||        |||||||||||||||||||||||||||||||||    
T  8323254 ctcgcccaatcatcacttgccacataagcaccacgtcgttaatgatagcccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatt 8323353  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||  | || | || ||| |||||||| |||| ||||||||||| ||||  | ||||||| || || ||||| || ||||||||||    
T  8323354 tgcaatggcaaaatgaaagaattagtaacttcaaggacgaaaattcaaatagcatatatttgcaggggcgaaagacctatttaagcc 8323440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 21260967 - 21260866
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  | || | ||||||||||||||| |||||||||||||||| ||||||||||||||| || |||||||| |  |||||||    
T  21260967 tcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagaactatttaa 21260868  T
Q  184 gc 185  Q
    ||    
T  21260867 gc 21260866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 188
Target Start/End: Complemental strand, 16118072 - 16117959
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    |||||||||||||||||||||||||||||  |||||||        ||| ||||||||||| |||||||||||||||| |||||||||||||||||| ||    
T  16118072 ctaattaggaccaaaagtcaaatgattaaattttgcag--------tggcaggattagtaacttcagggacgaaaattcaaatgacctatatttacaggg 16117981  T
Q  167 acgaaaaacatatttaagcctt 188  Q
    || ||| || ||||||| ||||    
T  16117980 acaaaagacctatttaaacctt 16117959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 8654209 - 8654106
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || ||||||||||| | ||| |||||||||||| ||| ||| ||||| | |||||||||||| ||||| ||| |||||||||||||||    
T  8654209 tcaaatgattagtaattgcagggacaaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattacagggatgaaaaacatatttaa 8654110  T
Q  184 gcct 187  Q
    ||||    
T  8654109 gcct 8654106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 20072867 - 20072970
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||||||| ||||| | ||| |||||||| ||||| ||| ||||| |||||||||    
T  20072867 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacgacctataattacagggatgaaaagcatatttaa 20072966  T
Q  184 gcct 187  Q
    ||||    
T  20072967 gcct 20072970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 34404585 - 34404483
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  | || || |||||||||||||| ||||| |||||||||| ||||||||||||||| || | |||||| || |||||||    
T  34404585 tcaaatgattaatatttgcaatgccaaat-ggaaggattagtaacttcagtgacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 34404487  T
Q  184 gcct 187  Q
    ||||    
T  34404486 gcct 34404483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 39181794 - 39181896
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||||||| ||||| | ||| |||||||| ||||| |||  ||||||||||||||    
T  39181794 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacgacctataattacagggattaaaaacatatttaa 39181893  T
Q  184 gcc 186  Q
    |||    
T  39181894 gcc 39181896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 20704844 - 20704740
Alignment:
Q  79 aaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacata 178  Q
    ||||||||||||||||||||||||| ||| | |||  |||||||||||| ||||||||  |||||| ||||||| ||||||||| || |||||| | |||    
T  20704844 aaaagtcaaatgattaatatttgcaaggataaattaaaaggattagtaatttcagggataaaaattcaaatgacttatatttac-agaacgaaagatata 20704746  T
Q  179 tttaag 184  Q
    ||||||    
T  20704745 tttaag 20704740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 187
Target Start/End: Original strand, 147383 - 147491
Alignment:
Q  79 aaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacata 178  Q
    |||| |||||||||||||||||  | ||  ||||||||| ||||||||| ||||||||| ||||||||||||| |||||||| || | |||||| |  ||    
T  147383 aaaaatcaaatgattaatatttttatgggtagattggaatgattagtaatttcagggacaaaaatttaaatgatctatatttgcaggaacgaaagagcta 147482  T
Q  179 tttaagcct 187  Q
    |||||||||    
T  147483 tttaagcct 147491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 22533672 - 22533776
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  | ||   | ||||||||||||| ||| |||||||||||| ||||||||||||||| || ||||||||||  |||||||    
T  22533672 tcaaatgattaatatttgcaatggcaacattgaaggattagtaacttcggggacgaaaattcaaatgacctatatttgcagggacgaaaaagctatttaa 22533771  T
Q  184 gcctt 188  Q
     ||||    
T  22533772 acctt 22533776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 39402132 - 39402204
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaa 142  Q
    ||||||||||||| ||||||||||||||||||||||| || | ||| ||||||||||||| |||||| |||||    
T  39402132 attaggaccaaaactcaaatgattaatatttgcaggggcaaaatgggaggattagtaagtccagggatgaaaa 39402204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 184
Target Start/End: Original strand, 41339635 - 41339735
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||||||||||||||||   | || | ||||| ||||||||| || | ||||||||||| |||||||||||||||||||| |||||  ||||||||||    
T  41339635 tcaaatgattaatatttgcgatggcaaaatggaatgattagtaactttatggacgaaaattcaaatgacctatatttacaagaacgaatgacatatttaa 41339734  T
Q  184 g 184  Q
    |    
T  41339735 g 41339735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 21261128 - 21261247
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    ||||||||||||||||||||||||| | |  ||||| | | |||||||||||||||| ||| |||| ||| ||||| | ||| ||||||| ||| || |     
T  21261128 ctaattaggaccaaaagtcaaatgagtgaactttgcggtggcagattggaaggattaataacttcatggatgaaaactcaaaggacctatctttgcagga 21261227  T
Q  167 acgaaaaacatatttaagcc 186  Q
    |||||| |||||||||||||    
T  21261228 acgaaagacatatttaagcc 21261247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 27753739 - 27753672
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| || ||||||||||||| ||||||||||||||| || |||||||| |||||||||||||    
T  27753739 gattagtaactttagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 27753672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 158
Target Start/End: Original strand, 27753761 - 27753835
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatat 158  Q
    ||||||||||||||||||||| | |||||||||||||||||||| |||||  ||||||||| |||| || |||||    
T  27753761 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagaaacgaaaattcaaataacttatat 27753835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 18934815 - 18934714
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||||| |||||||||||  | || | || |||||||||||| |||| ||||||||||| ||||||| ||||||| || ||| |||| ||||||||||    
T  18934815 tcaaatgactaatatttgcaatggcaaaatgaaaggattagtaacttcatggacgaaaattcaaatgacttatatttgcagggatgaaagacatatttaa 18934716  T
Q  184 gc 185  Q
    ||    
T  18934715 gc 18934714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 39181159 - 39181055
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||||||| ||||| | ||| | | |||| ||||| ||| ||||| |||||||||    
T  39181159 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcttataattacagggatgaaaagcatatttaa 39181060  T
Q  184 gcctt 188  Q
    |||||    
T  39181059 gcctt 39181055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 8323158 - 8323059
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||| | ||  | || | ||||||||||||||| |||| ||||||||||| |||||||||||||||| | ||| |||| || |||||||    
T  8323158 tcaaatgattaatatcttcaatggcaaaatggaaggattagtaacttcatggacgaaaattcaaatgacctatatttatagggatgaaagacctatttaa 8323059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 18934837 - 18934904
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| ||| |||| ||||||| |||||||||||||||||| |||||||| || ||||||||||    
T  18934837 gattagtaacttccgggatgaaaattcaaatgacctatatttacagggacgaaatacctatttaagcc 18934904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 22533650 - 22533583
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| |||||||||||||||| |||||||||| |||| || |||||||| || ||||||||||    
T  22533650 gattagtaacttcagggacgaaaattcaaatgacctaaatttgcagggacgaaagacctatttaagcc 22533583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 18013736 - 18013802
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  18013736 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacttatttaagc 18013802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 32052484 - 32052418
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| |||||| |||||||| || ||| ||||||| |||||||||    
T  32052484 gattagtaacttcagggacgaaaattcaaatgaactatatttgcagggatgaaaaacctatttaagc 32052418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 33735573 - 33735507
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  33735573 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 33735507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 41339611 - 41339549
Alignment:
Q  122 tagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
    |||||| |||||||||||||||| |||||| |||||||| || |||||||| |||||||||||    
T  41339611 tagtaacttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacatatttaag 41339549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 187
Target Start/End: Original strand, 22870462 - 22870563
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||||| ||| ||||| || | ||| |||||||||||| ||||||| ||||| | ||||| |||||| ||||| ||| ||||  |||||||||||    
T  22870462 aaatgattaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacagggatgaaatgcatatttaagc 22870561  T
Q  186 ct 187  Q
    ||    
T  22870562 ct 22870563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 34404607 - 34404675
Alignment:
Q  119 gattagtaagttcagggacg-aaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| |||| ||||| |||||| ||||||||||||||| ||||||||||| || ||||||||||    
T  34404607 gattagtaacttcatggacggaaaattcaaatgacctatatttgcaaggacgaaagacttatttaagcc 34404675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 6421882 - 6421819
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattta 182  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || ||||||    
T  6421882 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctattta 6421819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 16118211 - 16118144
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| || || |||||||||| ||||||||||||||| || |||||||| || ||||||||||    
T  16118211 gattagtaactttagagacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 16118144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 20857034 - 20856931
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||  ||| ||||| || | ||| |||||||||||| ||||||| ||||| | ||| | |||||| ||||| ||| ||||| |||||||||    
T  20857034 tcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 20856935  T
Q  184 gcct 187  Q
    ||||    
T  20856934 gcct 20856931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 25253210 - 25253277
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| |||| ||||||||||| ||||||||||||||| || ||| |||| || ||||||||||    
T  25253210 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcc 25253277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 12990912 - 12990978
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||| ||||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  12990912 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 12990978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 13064533 - 13064599
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||| ||||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  13064533 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 13064599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 20072223 - 20072121
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | || ||||||||||||||||||||| ||||| | ||| | |||||| |||||  || ||||| |||||||||    
T  20072223 tcaaatgattagtaattacaggggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagagatgaaaagcatatttaa 20072124  T
Q  184 gcc 186  Q
    |||    
T  20072123 gcc 20072121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 181
Target Start/End: Complemental strand, 16532995 - 16532898
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattt 181  Q
    ||||||||||| || || ||||| || | ||||||||||| |||||||||||| ||||| | ||| | |||||| ||||| ||| ||||| |||||||    
T  16532995 tcaaatgattagtaattacaggggcaaaatggaaggattaataagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatattt 16532898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 21260989 - 21261054
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
    ||||| ||| |||||| ||||||||| ||||||||||||||| || |||| ||| |||||||||||    
T  21260989 gattaataacttcaggaacgaaaattcaaatgacctatatttgcagggacaaaagacatatttaag 21261054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 183
Target Start/End: Original strand, 31108338 - 31108434
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||| |||||| | | ||||| |||||||||||||| ||| ||||| | |||||  |||||||| || ||| |||| ||||||||||    
T  31108338 aaatgattaatatttacagggataaaatggaaagattagtaagttcatggatgaaaaatcaaatg-tctatatttgcagggatgaaatacatatttaa 31108434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 22024131 - 22024063
Alignment:
Q  118 ggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    |||| ||||| |||| ||||||||||| ||||||||||||||| || |||||||| || ||| ||||||    
T  22024131 ggataagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatataagcc 22024063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 9915482 - 9915431
Alignment:
Q  135 gacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    |||||||||| |||||||||||||||| | |||||||| || ||||||||||    
T  9915482 gacgaaaattcaaatgacctatatttatagggacgaaagacctatttaagcc 9915431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 12628318 - 12628263
Alignment:
Q  129 ttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
    |||| ||||||||||| |||||||||||||||||| |||||||  || ||||||||    
T  12628318 ttcaaggacgaaaattcaaatgacctatatttacatggacgaaggacctatttaag 12628263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 16533623 - 16533725
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | ||||||||||| ||||||||| || ||||| | ||| | |||||| ||| | ||| ||||| |||||||||    
T  16533623 tcaaatgattagtaattacaggggcaaaatggaaggattaataagttcagagatgaaaaatcaaacggcctataattatagggatgaaaagcatatttaa 16533722  T
Q  184 gcc 186  Q
    |||    
T  16533723 gcc 16533725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 22869705 - 22869619
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaa 172  Q
    ||||| ||||| ||| ||||| || | ||| |||||||||||| ||||||| ||||| | ||||| |||||| ||||||||| ||||    
T  22869705 aaatggttaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacaaggatgaaa 22869619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 31108000 - 31107930
Alignment:
Q  117 aggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
    |||||||||||||||||||| ||||| | ||||| |||||| || || ||| ||||  |||||||||||||    
T  31108000 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagcct 31107930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 31119019 - 31118953
Alignment:
Q  122 tagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    |||||| |||||||| ||||||| ||||| ||||||||| || |||||||| |  ||||||||||||    
T  31119019 tagtaacttcagggatgaaaattcaaatggcctatatttgcagggacgaaagatctatttaagcctt 31118953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34404682 - 34404740
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagc 58  Q
    |||||| |||||||||||||||||||| | ||||||  ||||||||| |||||||||||    
T  34404682 ctcgcccaatcatcacttgccacatgggcaccacgtcactaatgacatcccacctcagc 34404740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 21978015 - 21978112
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattt 181  Q
    ||||||||||| || || ||||| || | ||| |||||||||||| ||||||| ||||| | ||||| || ||| ||||| ||| ||||| |||||||    
T  21978015 tcaaatgattagtaattacaggggcaaagtgggaggattagtaagctcagggatgaaaaatcaaatggcccataattacagggatgaaaagcatattt 21978112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 25317000 - 25317041
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||||||| |||| ||||||||||| |||||||||||||||    
T  25317000 gattagtaacttcaaggacgaaaattcaaatgacctatattt 25317041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 12628340 - 12628392
Alignment:
Q  120 attagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaa 172  Q
    |||||||| |||||||||||||||| |||| || ||||||| || ||||||||    
T  12628340 attagtaacttcagggacgaaaattcaaatcacttatatttgcatggacgaaa 12628392  T

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Target: chr4 (Bit Score: 107; Significance: 1e-53; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 20086623 - 20086436
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||||| |||||||||||||||||||| |        ||||||||||| |||||||||||||||||||||    
T  20086623 ctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcaacaaaaaaacctaattaggactaaaagtcaaatgattaatatt 20086524  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
    ||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||| |  ||||||| ||||||||||||||    
T  20086523 tgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttatagagacgaaagacatatttaagcct 20086436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 12691604 - 12691791
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||||| ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  12691604 ctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaa-ctaattaggaccaaaagtcaaatgattaatatt 12691702  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||||| | |||||||||||||||||| ||||||||| |||||| ||||||||||||||| || |||||||| |||||||||| ||||    
T  12691703 tgcaggggcggattggaaggattagtaacttcagggacaaaaattcaaatgacctatatttgcagggacgaaagacatatttaaccctt 12691791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 53559585 - 53559773
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgtg-ctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | ||||||  ||||||||||||||||| |||        |||||||||||||||||||||||||||||||||    
T  53559585 ctcgcccaatcatcacttgccacatgggcaccacgtcactaatgacagcccaccttagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatt 53559684  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||| ||||| ||||||||| || |||||||| |||||||||||||||    
T  53559685 tgcaggggcagattggaacgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcctt 53559773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 8 - 188
Target Start/End: Complemental strand, 22249912 - 22249731
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||  |||||||||||||||||||| |        ||||||||||||||||||||||||||||||||||||||||    
T  22249912 aatcatcacttgccacatgggcaccacgccgctaatgacagcccacctcaacaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaggg 22249813  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
     ||||||| |||||||||||| |||| ||||||||||| |||||| |||||||| || ||||||||||||||||||||||||    
T  22249812 gcagattgaaaggattagtaacttcatggacgaaaattcaaatgatctatatttgcagggacgaaaaacatatttaagcctt 22249731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 13872248 - 13872069
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||||||       ||||||||||||||||||||||||||||| |||||||| ||    
T  13872248 aatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattagtatttgcaagg 13872149  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
     || ||||||||||||| ||| |||| ||||||||||| |||| |||||||||| || |||||||| |||||||||||||    
T  13872148 gcatattggaaggattaataacttcatggacgaaaattcaaataacctatatttgcagggacgaaagacatatttaagcc 13872069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 47862350 - 47862536
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgtg-ctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| ||||||||||||||||||||   ||||||  ||||||||| |||||||||||       ||||||||||||||||||||||||||||||||||    
T  47862350 ctcgcccaatcatcacttgccacatgggtaccacgtcactaatgacatcccacctcagcaaaaaaatctaattaggaccaaaagtcaaatgattaatatt 47862449  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
    ||||||| || ||| ||||||||||||| |||| ||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||||    
T  47862450 tgcaggggcaaattagaaggattagtaacttcatggacgaaaattcaaatggcctatatttac-aggacgaaagacatatttaagcct 47862536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 33294342 - 33294528
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgtgctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatattt 100  Q
    |||||| |||||||||||||||||||| | ||||||   ||||||||||||||||||        ||||||||||||||||| |||||||||||||||||    
T  33294342 ctcgcctaatcatcacttgccacatgggcaccacgtcgcaatgacagcccacctcagtaaaaaaatctaattaggaccaaaaatcaaatgattaatattt 33294441  T
Q  101 gcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
    |||||| ||||| |||||||||||||| |||||||||||||||| ||||  ||||||||| || ||| |||| ||||||||||||||    
T  33294442 gcaggggcagatcggaaggattagtaacttcagggacgaaaattcaaattgcctatatttgcagggaggaaagacatatttaagcct 33294528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 19916842 - 19916663
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||| | |||||||||| |||| || |||        |||||||||||||||||||||||||||||||||    
T  19916842 ctcgcccaatcatcacttgccacatgggcaccacatcgctaatgacaacccaacttagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatt 19916743  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatat 179  Q
    ||||| | |||||||||||||||||||| ||||||| |||||||||||||||||||||||| || |||||||| ||||||    
T  19916742 tgcagtggcagattggaaggattagtaacttcaggggcgaaaatttaaatgacctatatttgcagggacgaaagacatat 19916663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 12691524 - 12691406
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||| || |||    
T  12691524 taattaggaccaaaagtcaaatgattaatatttgtagggacagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcatgga 12691425  T
Q  168 cgaaaaacatatttaagcc 186  Q
    ||||| || ||||||||||    
T  12691424 cgaaagacctatttaagcc 12691406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 8287130 - 8287319
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntc-taattaggaccaaaagtcaaatgattaatat 98  Q
    |||||| ||||||| |||||||||||| | |||||| ||||||||||||||||||||||        | |||| |||||||||||||||||||||||  |    
T  8287130 ctcgcccaatcatcccttgccacatgggcaccacgttgctaatgacagcccacctcagcaaaaaaaacctaatcaggaccaaaagtcaaatgattaaatt 8287229  T
Q  99 ttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    |||||| | |||||||||||||||||||| |||||||||||||||| ||||| ||||||||| || |||||||| || ||||||||||||    
T  8287230 ttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagcctt 8287319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 184
Target Start/End: Original strand, 54961636 - 54961813
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||| |||||||||| ||||||||| |        |||||||||| ||||||||||||||||||||||| | |||    
T  54961636 aatcatcacttgccacatgggcaccacgtcgctaatgacaacccacctcaccaaaaaaacctaattaggagcaaaagtcaaatgattaatatttacgggg 54961735  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
     ||||||| |||||||||||| ||||||||| |||||| ||||||||||||||| || |||||||| |||||||||||    
T  54961736 gcagattgaaaggattagtaacttcagggactaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 54961813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 187
Target Start/End: Original strand, 22249999 - 22250118
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||| |||||||||||||||||||||||||||| || |||||||| |||||||| |||||||||||||||| ||||| ||||||||| || |||    
T  22249999 taattaggactaaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcaggga 22250098  T
Q  168 cgaaaaacatatttaagcct 187  Q
    ||||| ||||||||||||||    
T  22250099 cgaaagacatatttaagcct 22250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 36 - 186
Target Start/End: Original strand, 47981870 - 47982020
Alignment:
Q  36 tgctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcaggg 135  Q
    |||||||||||| ||||||||||        |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||| |    
T  47981870 tgctaatgacagtccacctcagcaaaaaaacctaattaggaccaaaaatcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagag 47981969  T
Q  136 acgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| ||||   |||||||| || |||||||| |||||||||||||    
T  47981970 acgaaaattcaaatagtctatatttgcagggacgaaagacatatttaagcc 47982020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 13872335 - 13872453
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| |||||| ||||   |||||||| || |||    
T  13872335 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaagaattagtaacttcagggacaaaaattcaaatagactatatttgcaggga 13872434  T
Q  168 cgaaaaacatatttaagcc 186  Q
    ||||| |||||||||||||    
T  13872435 cgaaagacatatttaagcc 13872453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 37678034 - 37677848
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgtg-ctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||||   ||||||| ||||||||| |||        ||||||| |||||||||||||||||||||  ||    
T  37678034 ctcgcccaatcatcacttgccacatgggcaccacgccactaatgatagcccaccttagcaaaaaaacctaattatgaccaaaagtcaaatgattaaattt 37677935  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||| | ||||| |||||||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || ||||||||||    
T  37677934 tgcagtggcagatcggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggaagaaagacctatttaagcc 37677848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 47980803 - 47980687
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||||  |||||||| || |||    
T  47980803 taattaggatcaaaagtcaaatgattaatatttgcagggatagattggaaggatcagtaacttcagggacgaaaattcaaatggtctatatttgcaggga 47980704  T
Q  168 cgaaaaacatatttaag 184  Q
    ||||| || ||||||||    
T  47980703 cgaaagacctatttaag 47980687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 54961549 - 54961429
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||| || ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||| |||||  |||||||| || |||    
T  54961549 taattatgatcaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggtctatatttgcaggga 54961450  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| || ||||||||||||    
T  54961449 cgaaagacctatttaagcctt 54961429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 33294262 - 33294135
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||| |||||||||| ||||||||||||||||||||| || ||||||||||||||||| |||| |||| |||||| |||| |||||||||| || |||    
T  33294262 taattatgaccaaaagttaaatgattaatatttgcaggggcaaattggaaggattagtaacttcatggacaaaaattcaaataacctatatttgcatgga 33294163  T
Q  168 cgaaaaacatatttaagccttgattaaa 195  Q
    | ||||||||||||||||| | ||||||    
T  33294162 caaaaaacatatttaagccgtaattaaa 33294135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 50246043 - 50245871
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||| | ||||| | |||||| ||||||||||| |||||| |||        ||||||| ||| |||||||||||||||||||||    
T  50246043 ctcgcccaatcatcacttgtcgcatgggcaccacgtcgctaatgacagtccaccttagcgaaaaaacctaattaagactaaaagtcaaatgattaatatt 50245944  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaa 172  Q
    ||||| | |||||||||| ||||||||| |||| ||| ||||||| |||||||||||||||||| ||||||||    
T  50245943 tgcagtggcagattggaatgattagtaacttcatggatgaaaattcaaatgacctatatttacagggacgaaa 50245871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 68 - 182
Target Start/End: Complemental strand, 34238588 - 34238474
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||| |||||||||||||||||||||||||||||||| || |||| |||||||||||| ||||| |||||||||| ||||  ||||||||||||||||    
T  34238588 taattatgaccaaaagtcaaatgattaatatttgcaggggcatattgaaaggattagtaacttcagagacgaaaattcaaatagcctatatttacaagga 34238489  T
Q  168 cgaaaaacatattta 182  Q
    ||||| || ||||||    
T  34238488 cgaaagacctattta 34238474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 47862270 - 47862152
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||| ||||| |||||||||| ||||||| ||||||| || |||    
T  47862270 taattaggacaaaaagtcaaatgattagtatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatgacatatatttgcaggga 47862171  T
Q  168 cgaaaaacatatttaagcc 186  Q
     |||| || ||||||||||    
T  47862170 tgaaagacctatttaagcc 47862152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 84 - 190
Target Start/End: Original strand, 50246140 - 50246246
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||| || ||| |||| |  |||||||    
T  50246140 tcaaatgattaatatttgcagtgacagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagatctatttaa 50246239  T
Q  184 gccttga 190  Q
    |||||||    
T  50246240 gccttga 50246246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 37678130 - 37678231
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||| | ||||||| || |||||||| || |||||||    
T  37678130 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaatttaaatggcttatatttgcagggacgaaagacctatttaa 37678229  T
Q  184 gc 185  Q
    ||    
T  37678230 gc 37678231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 19916938 - 19917040
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||| | ||||||| || ||||||||| ||||  |||||||||||||||||||||||||| || ||||||||||| |||||||    
T  19916938 tcaaatgattaatatttgcagtggcagattgaaatgattagtaacttcaaagacgaaaatttaaatgacctatatttgcagggacgaaaaacctatttaa 19917037  T
Q  184 gcc 186  Q
    |||    
T  19917038 gcc 19917040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 195
Target Start/End: Original strand, 35730943 - 35731054
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  |||| | ||||||||||||||| |||||||||||||||| ||||||||||||||| || |||||||| || || ||||    
T  35730943 tcaaatgattaatatttgcaatgacataatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctacttaa 35731042  T
Q  184 gccttgattaaa 195  Q
     ||||| |||||    
T  35731043 accttgtttaaa 35731054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 48507682 - 48507803
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    ||||||| |||||||||||||||||||||  ||||  | | |||||||||||||||||||| ||||| |||||||||| |||||||||||||||  | ||    
T  48507682 ctaattaagaccaaaagtcaaatgattaaattttgttgtggcagattggaaggattagtaacttcagagacgaaaattcaaatgacctatatttgtaggg 48507781  T
Q  167 acgaaaaacatatttaagcctt 188  Q
    |||||| || ||||||| ||||    
T  48507782 acgaaagacctatttaaacctt 48507803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 26601342 - 26601426
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgac 152  Q
    |||||||||||||||||||||||||||||||||||| || || ||||||| ||||||||| |||| ||||||||||| |||||||    
T  26601342 taattaggaccaaaagtcaaatgattaatatttgcatgggcatattggaatgattagtaacttcatggacgaaaattcaaatgac 26601426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 66 - 187
Target Start/End: Original strand, 13336818 - 13336939
Alignment:
Q  66 tctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaag 165  Q
    |||||| |||||||||  |||| ||||||| | ||||||||| ||| ||| |||||||||||||||||||| |||| || ||||||||||||||| || |    
T  13336818 tctaataaggaccaaatttcaagtgattaacaattgcagggaaagaatgggaggattagtaagttcagggatgaaatttcaaatgacctatatttgcagg 13336917  T
Q  166 gacgaaaaacatatttaagcct 187  Q
    || ||||  |||||||||||||    
T  13336918 gatgaaatgcatatttaagcct 13336939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 53559505 - 53559440
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcag 133  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||    
T  53559505 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattaataacttcag 53559440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 52339307 - 52339239
Alignment:
Q  74 ggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaa 142  Q
    |||||||||||||| ||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||    
T  52339307 ggaccaaaagtcaagtgattaatatttgcagggaaagattgaaaggattagtaaattcagggaccaaaa 52339239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 34238735 - 34238845
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    ||||||||||| ||||||||||||||||||||||||| ||       | ||  |||||||| ||||||||||||||||||||||| |||||||| || |     
T  34238735 ctaattaggactaaaagtcaaatgattaatatttgcatgg-------gaaaaaattagtaatttcagggacgaaaatttaaatgatctatatttgcagga 34238827  T
Q  167 acgaaaaacatatttaag 184  Q
    |||||||| |||||||||    
T  34238828 acgaaaaatatatttaag 34238845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 19740930 - 19740860
Alignment:
Q  116 aaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    |||||||||||| |||||||||||||||| ||||||| ||||||| ||||||||||| || ||||||||||    
T  19740930 aaggattagtaacttcagggacgaaaattcaaatgacatatatttgcaaggacgaaagacctatttaagcc 19740860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 32846464 - 32846363
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  | || | ||||||||||| ||| |||||| ||||||||| ||||| ||||||||| |||| |||||| || |||||||    
T  32846464 tcaaatgattaatatttgcaatggcaaaatggaaggattaataacttcaggaacgaaaattcaaatggcctatatttgcaagcacgaaagacctatttaa 32846365  T
Q  184 gc 185  Q
    ||    
T  32846364 gc 32846363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 187
Target Start/End: Complemental strand, 53475947 - 53475830
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacg 169  Q
    |||||||| |||| |||||||||||||||||||| || ||  ||| |||||||||||| || ||||| ||||| | |||||  |||||||| ||| || |    
T  53475947 attaggactaaaactcaaatgattaatatttgcaagggcaatttgaaaggattagtaactttagggatgaaaactcaaatggtctatatttgcaaagatg 53475848  T
Q  170 aaaaacatatttaagcct 187  Q
    ||| ||||||||||||||    
T  53475847 aaagacatatttaagcct 53475830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 187
Target Start/End: Original strand, 53477064 - 53477181
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacg 169  Q
    ||||||| ||||  ||||||||||||||||||||||| || | ||| ||||||||||||||||| || ||||| | |||||||||||| || ||  || |    
T  53477064 attaggaacaaatttcaaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagagatgaaaaatcaaatgacctataattgcagagatg 53477163  T
Q  170 aaaaacatatttaagcct 187  Q
    |||  |||||||||||||    
T  53477164 aaatgcatatttaagcct 53477181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 8287034 - 8286930
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  | || | ||||||||||| ||| ||||| |||||||||| ||||| | ||||||| || |||||||| || |||||||    
T  8287034 tcaaatgattaatatttgcaatggcaaaatggaaggattattaacttcagagacgaaaattcaaatggcttatatttgcagggacgaaagacctatttaa 8286935  T
Q  184 gcctt 188  Q
    |||||    
T  8286934 gcctt 8286930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 38814325 - 38814429
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||||||| ||||| | ||| | |||| | ||||||||| ||||| |||||||||    
T  38814325 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctaaaattacaaggatgaaaagcatatttaa 38814424  T
Q  184 gcctt 188  Q
    |||||    
T  38814425 gcctt 38814429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 27813318 - 27813436
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    ||||||| ||||||||||||| | |||||  ||||||| | |||||||||||||||||||| ||||||| || ||||| ||||| | |||| || || ||    
T  27813318 ctaattatgaccaaaagtcaagtaattaaattttgcagtggcagattggaaggattagtaacttcaggggcggaaattcaaatggcgtata-ttgcaggg 27813416  T
Q  167 acgaaaaacatatttaagcc 186  Q
    |||||| || ||||||||||    
T  27813417 acgaaagacttatttaagcc 27813436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 37678108 - 37678041
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || |||||||| || ||||||||||    
T  37678108 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 37678041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 20601072 - 20601138
Alignment:
Q  120 attagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    |||| ||| ||||||||||||||||  ||||||||||| |||||||||||||| |||||||||||||    
T  20601072 attaataacttcagggacgaaaattcgaatgacctataattacaaggacgaaagacatatttaagcc 20601138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 20086703 - 20086820
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||| |||||||||||||||||||||||||  | ||||||  |||||||| ||| ||||| ||  ||| || |||||   |||||||| |||||    
T  20086703 taattaggacaaaaagtcaaatgattaatatttgcaaagccagattaaaaggattaataacttcagagataaaatttcaaatgttttatatttagaagga 20086802  T
Q  168 cgaaaaacatatttaagc 185  Q
    ||||| || |||||||||    
T  20086803 cgaaagacttatttaagc 20086820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 52816421 - 52816525
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | ||||||||||||||||||||| || ||||| | ||| | |||||| ||||| ||| ||||| |||||||||    
T  52816421 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagagatgaaaaatcaaacggcctataattacagggatgaaaatcatatttaa 52816520  T
Q  184 gcctt 188  Q
    |||||    
T  52816521 gcctt 52816525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 56556684 - 56556580
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||| ||| ||||| | ||| | |||||| ||||| ||| ||||| |||||||||    
T  56556684 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 56556585  T
Q  184 gcctt 188  Q
    |||||    
T  56556584 gcctt 56556580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 8287056 - 8287123
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || | |||||| || ||||||||||    
T  8287056 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 8287123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 22882330 - 22882429
Alignment:
Q  89 tgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||||| | ||||||||| ||| ||| ||||||| |||||||||||| |||| || ||||||||||||||| || ||| ||||  ||||||| ||||||    
T  22882330 tgattaacaattgcagggaaagaatgggaggattattaagttcagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatattttagcctt 22882429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 22933994 - 22934093
Alignment:
Q  89 tgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||||| | ||||||||| ||| ||| ||||||| |||||||||||| |||| || ||||||||||||||| || ||| ||||  ||||||| ||||||    
T  22933994 tgattaacaattgcagggaaagaatgggaggattattaagttcagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatattttagcctt 22934093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 48507532 - 48507401
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||||| |  |||||| |||||||| ||||  |||| | | ||||| ||||||| ||||   |  ||||| |||||||||||||||||||| ||    
T  48507532 taattaggaccatatttcaaattattaatatgtgcaatgacaaaatagaagggttagtaacttcataaataaaaatataaatgacctatatttacaaaga 48507433  T
Q  168 cgaaaaacatatttaagccttgattaaattac 199  Q
    ||||| || |||||||||| |||| |||||||    
T  48507432 cgaaatacctatttaagccatgataaaattac 48507401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 183
Target Start/End: Complemental strand, 54590261 - 54590146
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||| |||| |||||||||||||||||| || | || | |||||| |||||||||||||  || ||||| | |||||||||||| || || |||    
T  54590261 taattaggacgaaaattcaaatgattaatatttgtagaggcaaaatggaagaattagtaagttcaaagatgaaaaatcaaatgacctataattgcaggga 54590162  T
Q  168 cgaaaaacatatttaa 183  Q
     ||||  |||||||||    
T  54590161 tgaaatgcatatttaa 54590146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 54591560 - 54591678
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatattt--gcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||| |||| |||||||||||||||||  |||||| || | ||| ||| |||||||||||||||| ||||| | |||||| ||||| || || |||    
T  54591560 attaggacgaaaattcaaatgattaatatttttgcaggggcaaaatgggaggtttagtaagttcagggatgaaaaatcaaatgatctataattgcaggga 54591659  T
Q  168 cgaaaaacatatttaagcc 186  Q
     ||||  ||||||||||||    
T  54591660 tgaaatgcatatttaagcc 54591678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 12691530 - 12691596
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  12691530 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacttatttaagc 12691596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 33294268 - 33294334
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| ||| |||||||||||| ||||||||||||||| || ||| |||| ||||||||||||    
T  33294268 gattagtaacttccgggacgaaaattcaaatgacctatatttgcagggatgaaagacatatttaagc 33294334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 34238594 - 34238660
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| |||||||||| |||| || ||| ||||||| |||||||||    
T  34238594 gattagtaacttcagggacgaaaattcaaatgacctaaatttgcagggatgaaaaacctatttaagc 34238660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 37732397 - 37732463
Alignment:
Q  120 attagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    |||||||| |||||| ||||||||| |||| ||||||||||||| ||||| ||||| ||||||||||    
T  37732397 attagtaacttcaggaacgaaaattcaaataacctatatttacagggacgtaaaacctatttaagcc 37732463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 38813656 - 38813554
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||| |||| || || ||||| || | |||||||||||||||||||||||| ||||| | ||| | |||||| ||||| ||| ||||| |||||||||    
T  38813656 tcaaattattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 38813557  T
Q  184 gcc 186  Q
    |||    
T  38813556 gcc 38813554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 47862276 - 47862342
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  47862276 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 47862342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 23455021 - 23454945
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagccttgattaaa 195  Q
    |||||||||| ||||||| ||||| | ||||| |||||| ||||| ||| ||||  |||||||||||||||||||||    
T  23455021 gattagtaagctcagggatgaaaaatcaaatggcctataattacagggatgaaatgcatatttaagccttgattaaa 23454945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 35730767 - 35730731
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgca 103  Q
    |||||||||||||||||||||||||||||||||||||    
T  35730767 ctaattaggaccaaaagtcaaatgattaatatttgca 35730731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 53752354 - 53752278
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatt 144  Q
    ||||||||||||||||||||||||||| ||  ||||||||  | |||| |||||||||||||  || ||||||||||    
T  53752354 taattaggaccaaaagtcaaatgattagtaaatgcagggaaggtttgggaggattagtaagtatagagacgaaaatt 53752278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 53753400 - 53753516
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||| || ||||||| |    |||| ||||||| |||||  ||||||||||||| ||| || |  |||||| | |||    
T  53753400 taattaggaccaaaagtcaaatgattagtaattgcaggaaagttttgggaggattaataagtatagggacgaaaattcaaacgagcactatttataggga 53753499  T
Q  168 cgaaaaacatatttaag 184  Q
     |||| |||||||||||    
T  53753500 tgaaacacatatttaag 53753516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 35730921 - 35730854
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| |||| ||||||||||| ||||||||||||||| || |||||||| |  ||||||||||    
T  35730921 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcatggacgaaagaactatttaagcc 35730854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 489466 - 489564
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattta 182  Q
    ||||||||||||||||||||  | || | ||||||||||||||| ||| |||||||||||  ||| | |||||||||| |  ||||||| || ||||||    
T  489466 tcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttctgggacgaaaatccaaacggcctatatttatatagacgaaagacctattta 489564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 515258 - 515356
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattta 182  Q
    ||||||||||||||||||||  | || | ||||||||||||||| ||| |||||||||||  ||| | |||||||||| |  ||||||| || ||||||    
T  515258 tcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttctgggacgaaaatccaaacggcctatatttatatagacgaaagacctattta 515356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 20086697 - 20086631
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| ||| ||||||||||| || ||| |||| || |||||||||    
T  20086697 gattagtaacttcagggacgaaaattcaaaggacctatatttgcagggatgaaagacctatttaagc 20086631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 22249993 - 22249927
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||| ||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  22249993 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacttatttaagc 22249927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 23455689 - 23455791
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||||| ||| ||| | || | ||| |||||||||||| ||||| | ||||| | |||||||||||| ||||| ||| ||||  |||||||||||    
T  23455689 aaatgattaatttttacagtggcaaaatgggaggattagtaagctcaggaatgaaaaatcaaatgacctataattacagggatgaaatgcatatttaagc 23455788  T
Q  186 ctt 188  Q
    |||    
T  23455789 ctt 23455791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 53559511 - 53559577
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || ||| |||||    
T  53559511 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatgtaagc 53559577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 27813182 - 27813239
Alignment:
Q  129 ttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    |||||||||||||||| |||||| |||||||| || |||||||| || ||||||||||    
T  27813182 ttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacctatttaagcc 27813239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 48507538 - 48507591
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaa 172  Q
    ||||||||| |||||||||||||||| ||||||| ||||||| || ||||||||    
T  48507538 gattagtaacttcagggacgaaaattcaaatgacttatatttgcagggacgaaa 48507591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 56557323 - 56557424
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||| ||| ||||| | ||| | |||||| ||| | ||| ||||| |||||||||    
T  56557323 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattagagggatgaaaagcatatttaa 56557422  T
Q  184 gc 185  Q
    ||    
T  56557423 gc 56557424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 184
Target Start/End: Complemental strand, 27813151 - 27813051
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| ||||||||  |||| | ||||||||| ||||| |||| |||  |||||| ||||||| ||||||| || |||| ||| || |||||||    
T  27813151 tcaaatgattagtatttgcaatgacaaaatggaaggatcagtaacttcatggataaaaattcaaatgacttatatttgcagggacaaaagacttatttaa 27813052  T
Q  184 g 184  Q
    |    
T  27813051 g 27813051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 45199229 - 45199169
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatt 144  Q
    ||||||||||||||||||||  | || |||| |||||||||||| ||||| ||||||||||    
T  45199229 tcaaatgattaatatttgcactgtcatattgaaaggattagtaacttcagagacgaaaatt 45199169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 50246118 - 50246050
Alignment:
Q  119 gattagtaagttcaggg-acgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| ||||||| ||||||||| ||||||| |||| ||||| |||||||| || ||||||||||    
T  50246118 gattagtaacttcaggggacgaaaattcaaatgacttataattacagggacgaaagacctatttaagcc 50246050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 52815733 - 52815661
Alignment:
Q  116 aaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    |||||||||||||||||||||  |||| | ||| | |||||| ||||| ||| ||||| ||||||||||||||    
T  52815733 aaggattagtaagttcagggataaaaaatcaaacggcctataattacagggatgaaaagcatatttaagcctt 52815661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 489443 - 489376
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| || ||||||| ||||| ||| ||||||||||| || |||||||| || ||||||||||    
T  489443 gattagtaaatttagggacggaaattcaaacgacctatatttgcagggacgaaagacctatttaagcc 489376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 515235 - 515168
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| || ||||||| ||||| ||| ||||||||||| || |||||||| || ||||||||||    
T  515235 gattagtaaatttagggacggaaattcaaacgacctatatttgcagggacgaaagacctatttaagcc 515168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 20601211 - 20601266
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggatt 122  Q
    ||||||| || |||||||||||||||| |||||||||  ||||||||| |||||||    
T  20601211 ctaattatgatcaaaagtcaaatgatttatatttgcaatgacagattgaaaggatt 20601266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 35730719 - 35730660
Alignment:
Q  129 ttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||| |||||||||| ||||||| ||||||| || |||||||| || ||||||||||||    
T  35730719 ttcagagacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaagcctt 35730660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 35730840 - 35730789
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagc 58  Q
    |||||||||||||||||||||| |||||| ||||||||||| ||| ||||||    
T  35730840 aatcatcacttgccacatggacaccacgtcgctaatgacagtccatctcagc 35730789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 9254522 - 9254404
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacg 169  Q
    ||||||||||||  |||| ||||||| | ||||||||| | | |   |||||||||||||||| ||| |||| || ||||| ||||||||| || ||| |    
T  9254522 attaggaccaaatttcaagtgattaacaattgcagggaaataataagaggattagtaagttcaaggatgaaatttcaaatggcctatatttgcagggatg 9254423  T
Q  170 aaaaacatatttaagcctt 188  Q
    |||  ||||||| ||||||    
T  9254422 aaatgcatattttagcctt 9254404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 13231351 - 13231281
Alignment:
Q  74 ggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatt 144  Q
    ||||||||  |||| ||||||||| ||||||||| |  |||| ||||||||||||| ||||||| ||||||    
T  13231351 ggaccaaatttcaagtgattaataattgcagggaaattttgggaggattagtaagtacagggactaaaatt 13231281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 22881285 - 22881167
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||  |||| ||||||| | ||| ||| | ||| ||| ||||||||||| | ||| || |||| || ||||| |||||||||||| |||    
T  22881285 taattaggaccaaatttcaagtgattaacaattgtaggaaaagaatgggaggattagtaaatgcagagatgaaatttcaaatggcctatatttacaggga 22881186  T
Q  168 cgaaaaacatatttaagcc 186  Q
     ||||  ||||||| ||||    
T  22881185 tgaaatgcatattttagcc 22881167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 22932949 - 22932831
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||  |||| ||||||| | ||| ||| | ||| ||| ||||||||||| | ||| || |||| || ||||| |||||||||||| |||    
T  22932949 taattaggaccaaatttcaagtgattaacaattgtaggaaaagaatgggaggattagtaaatgcagagatgaaatttcaaatggcctatatttacaggga 22932850  T
Q  168 cgaaaaacatatttaagcc 186  Q
     ||||  ||||||| ||||    
T  22932849 tgaaatgcatattttagcc 22932831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 47980809 - 47980875
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||| ||||||||||| ||||||||| ||||| || ||| |||| || |||||||||    
T  47980809 gattagtaacttcatggacgaaaattcaaatgacctgtatttgcagggatgaaagacctatttaagc 47980875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 20601049 - 20600973
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    |||||| ||||||| |||||| | || |||||||| ||||| || ||||   ||||||||| |||||||||||||||    
T  20601049 tcaaattattaatagttgcagtggcaaattggaagaattagcaacttcaaaaacgaaaattcaaatgacctatattt 20600973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 55013087 - 55013190
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | ||| |||||||||||| ||||| | ||||| | ||||  |||||| ||||| ||| ||||| |||||||||    
T  55013087 tcaaatgattagtaattacaggggcaaactgggaggattagtaagctcagg-atgaaaaatcaaatagcctataattacatggatgaaaagcatatttaa 55013185  T
Q  184 gcctt 188  Q
    |||||    
T  55013186 gcctt 55013190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 91)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 40525705 - 40525901
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||| | |||||||||| ||||||||| |        |||||||||||||||||||||||||||||||||    
T  40525705 ctcgcccaatcatcacttgccacatgggcaccacttcgctaatgacatcccacctcatcaaaaaaacctaattaggaccaaaagtcaaatgattaatatt 40525804  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagccttgattaaat 196  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||| |||| ||||||||||||| ||||| || | |||||||||||| ||||||||    
T  40525805 tgcaggggcagattggaatgattagtaatttcagggacgaaaattcaaataacctatatttacagggacggaagatatatttaagcctagattaaat 40525901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 41182094 - 41182282
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||| ||||||||||| | |||||| ||||||||||||||||||| ||        |||||||||||||||||||||||||||||||||    
T  41182094 ctcgcccaatcatcatttgccacatgggcaccacgtcgctaatgacagcccacctcggcaaaaaaacctaattaggaccaaaagtcaaatgattaatatt 41182193  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||||| ||||||| || ||||||||| |||||||||||||||| ||||||| ||||||| || |||||||| |||||||||||||||    
T  41182194 tgcaggggcagattgaaatgattagtaacttcagggacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaagcctt 41182282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 43866916 - 43867095
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||  ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||    
T  43866916 aatcatcacttgccacatgggcaccacgccgctaatgacagcccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaggg 43867015  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
     ||||||| |||||||||||| |||| ||||||||||| |||||  |||||||| || ||||||||||||||||||||||    
T  43867016 gcagattgaaaggattagtaacttcatggacgaaaattcaaatggtctatatttgcagggacgaaaaacatatttaagcc 43867095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 8 - 188
Target Start/End: Complemental strand, 36623532 - 36623350
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnnt-ctaattaggaccaaaagtcaaatgattaatatttgcagg 105  Q
    |||||||||||||||||||| | |||||| ||||||||||||||| ||||||         |||||||||||||||||||||||||||||||||||||||    
T  36623532 aatcatcacttgccacatgggcaccacgtcgctaatgacagcccaactcagcaaaaaaaaactaattaggaccaaaagtcaaatgattaatatttgcagg 36623433  T
Q  106 gacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
      ||||||| |||||||||||| |||||||||||||||| ||||| ||||||||| || ||||||||||||||||||||||||    
T  36623432 agcagattgaaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaaaacatatttaagcctt 36623350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 8 - 184
Target Start/End: Complemental strand, 41801995 - 41801818
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||| ||| | |||||| |||||| |||||||||||||||        ||||||| || |||||||||||||||||||||||||||||    
T  41801995 aatcatcacttgccacgtgggcaccacgtcgctaataacagcccacctcagcaaaaaaacctaattatgatcaaaagtcaaatgattaatatttgcaggg 41801896  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
     |||||||||||||||||||| |||||| ||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  41801895 gcagattggaaggattagtaacttcaggaacgaaaattcaaatgacctatatttgcagggacgaaaaacatatttaag 41801818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 25287910 - 25287790
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||| || ||||||||| |||    
T  25287910 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggccaatatttacaggga 25287811  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| |||||||||||||||    
T  25287810 cgaaagacatatttaagcctt 25287790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 23424717 - 23424896
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||||  |||| | ||||||| ||||||||||||||        |||||||||||||||| |||||||||||||||||||||||    
T  23424717 aatcatcacttgccacatggataccacatcgctaatgtcagcccacctcagcaacaaaacctaattaggaccaaaaatcaaatgattaatatttgcaggg 23424816  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
     |||||||||| ||||||||| |||||||||||||||| ||||| ||||||||| || | |||||| |||||||||||||    
T  23424817 gcagattggaatgattagtaacttcagggacgaaaattcaaatggcctatatttgcaggaacgaaagacatatttaagcc 23424896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 11478263 - 11478136
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||| ||||||||||||||| || |||    
T  11478263 taattagggccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcaggga 11478164  T
Q  168 cgaaaaacatatttaagccttgattaaa 195  Q
    |||||||| |||||||||||| ||||||    
T  11478163 cgaaaaacctatttaagcctttattaaa 11478136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 8 - 183
Target Start/End: Original strand, 27856947 - 27857123
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||| || ||||||||||||||| |||         |||||||||||||||||||||||||||||||||||| ||    
T  27856947 aatcatcacttgccacatgggcaccacgtcgccaatgacagcccaccttagcaaaaaaacataattaggaccaaaagtcaaatgattaatatttgcaagg 27857046  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
     |||||||||| ||||||||| |||||||||||||||| ||||| ||||||||| || |||||||| ||||||||||    
T  27857047 gcagattggaatgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaa 27857123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 8 - 187
Target Start/End: Complemental strand, 29190339 - 29190159
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||| ||||||| || ||||||||||        |||||||||||||||||||||||||||||||||||||||||    
T  29190339 aatcatcacttgccacatgggcaccacgtcgctaatggcaacccacctcaggaaaaaaatctaattaggaccaaaagtcaaatgattaatatttgcaggg 29190240  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
    | ||||||||||||||||||| ||||| |||||||||| | ||| ||||||||| || ||| |||| | ||||||||||||    
T  29190239 atagattggaaggattagtaacttcagagacgaaaattcagatggcctatatttgcagggaggaaagatatatttaagcct 29190159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 11478344 - 11478506
Alignment:
Q  2 tcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatattt 100  Q
    ||||| |||||||||||||||||||| | |||||| ||||||||||| ||||||||||        |||||||||||||||| |||||||||||||||||    
T  11478344 tcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagtccacctcagcaaaaaaacctaattaggaccaaaaatcaaatgattaatattt 11478443  T
Q  101 gcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttaca 163  Q
    |||||| |||||||||||||||||||| ||||||||||||| || |||||  |||||||||||    
T  11478444 gcaggggcagattggaaggattagtaacttcagggacgaaagttcaaatggtctatatttaca 11478506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 36623619 - 36623739
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| |||||||||||||||| ||||| ||||||||| || |||    
T  36623619 taattaggaccaaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcaggga 36623718  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| |||||||||||||||    
T  36623719 cgaaagacatatttaagcctt 36623739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 188
Target Start/End: Complemental strand, 37342961 - 37342780
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | ||| || |||||||||| |||||||||||        ||||||||||||||||||||||||||||||||||||||||    
T  37342961 aatcatcacttgccacatgggcaccatgtcgctaatgacaacccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgcaggg 37342862  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
     | ||||| |||||||||||| |||||| ||||||||| |||||  || ||||| || |||||||||| |||||||||||||    
T  37342861 gcggattgaaaggattagtaacttcaggaacgaaaattcaaatggtctgtatttgcagggacgaaaaagatatttaagcctt 37342780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 43866829 - 43866710
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| |||||||||||||||| ||||| ||||||||| || |||    
T  43866829 taattaggaccaaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcaggga 43866730  T
Q  168 cgaaaaacatatttaagcct 187  Q
    ||||| ||||||||||||||    
T  43866729 cgaaagacatatttaagcct 43866710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 7579 - 7396
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||  | |||||| ||||||||||| |||| |||||        ||||||| |||||||||||||||||||||||||    
T  7579 ctcgcccaatcatcacttgccacatgagcaccacgtcgctaatgacagtccacttcagcaaaaaaacctaattatgaccaaaagtcaaatgattaatatt 7480  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    || |||||||  ||||||| |||||||| |||||||| ||||||| ||||||||||||||| || |||||||| ||||||||||    
T  7479 tgtagggacatgttggaagaattagtaacttcagggaagaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 7396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 26739914 - 26740101
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntct-aattaggaccaaaagtcaaatgattaatat 98  Q
    |||||| |||||||||||| ||||||||| |||| | ||||||||||||||||||||||        || |||||| |||||||||||||||||||||||    
T  26739914 ctcgcccaatcatcacttggcacatggacaccacatcgctaatgacagcccacctcagcaaaaaaaacttaattagaaccaaaagtcaaatgattaatat 26740013  T
Q  99 ttgcaggga-cagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||| ||||  ||||||| |||||||||||| |||| ||||||||||| ||||||||||||||| || |||||||| ||||||||||||    
T  26740014 ttgtagggggcagattgcaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 26740101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 37343048 - 37343164
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| |||||||||||||||| ||||||||||||||| || ||     
T  37343048 taattaggaccaaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatgacctatatttgcagggg 37343147  T
Q  168 cgaaaaacatatttaag 184  Q
    ||||| |||||||||||    
T  37343148 cgaaagacatatttaag 37343164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 40525625 - 40525505
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||| ||||||| ||||||| || | |    
T  40525625 taattaggaccaaaagtcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgacatatatttgcaggaa 40525526  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| || ||||||||||||    
T  40525525 cgaaagacttatttaagcctt 40525505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 67 - 186
Target Start/End: Complemental strand, 547549 - 547431
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||| ||||||||| || ||    
T  547549 ctaattaggaccaaaagtgaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaatttaaatggcctatatttgcaggg 547450  T
Q  167 acgaaaaacatatttaagcc 186  Q
    ||| ||| ||||||||||||    
T  547449 acg-aaagcatatttaagcc 547431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 7659 - 7779
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| |||| ||||||||||| ||||| ||||||||| || |||    
T  7659 taattatgaccaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcatggacgaaaattcaaatggcctatatttgcaggga 7758  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| || ||||||||||||    
T  7759 cgaaagacctatttaagcctt 7779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 67 - 187
Target Start/End: Complemental strand, 40422279 - 40422159
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| | ||||| |||||||||| | ||||||||||||| || ||    
T  40422279 ctaattaggaccaaaagtcaaatgattaatatttgcagtggcagattggaaggattagttacttcagagacgaaaattcatatgacctatatttgcaggg 40422180  T
Q  167 acgaaaaacatatttaagcct 187  Q
    |||||| || |||||||||||    
T  40422179 acgaaagacctatttaagcct 40422159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 41251241 - 41251121
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||||| || |||||||||||| || |||    
T  41251241 taattatgaccaaaagtcaaatgattaatatttgtagggacatattggaaggattagtaacttcagagacgaaaattcaattgacctatatttgcaggga 41251142  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| || ||||||||||||    
T  41251141 cgaaagacctatttaagcctt 41251121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 20096225 - 20096394
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntc-taattaggaccaaaagtcaaatgattaa---tatttgc 102  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||||||        | ||||||||||||||| ||||||||||||   |||||||    
T  20096225 aatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaacctaattaggaccaaaattcaaatgattaaatatatttgc 20096324  T
Q  103 agggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaa 172  Q
    | || |||||||||||||||||||| |||||||||||||||| ||||| ||||||||| || ||||||||    
T  20096325 atgggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaa 20096394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 20096138 - 20096018
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||| ||||||||| |||||| ||||||| ||||||| || |||    
T  20096138 taattaggaccaaaagtcaaatgattaatatttgcagaggcaaattggaaggattagtaacttcagggacaaaaattcaaatgacatatatttgcaggga 20096039  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| || ||||||| ||||    
T  20096038 cgaaagacctatttaaacctt 20096018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 184
Target Start/End: Original strand, 31690094 - 31690277
Alignment:
Q  2 tcgccaaatcatcacttgccacatggacgccacgtg-ctaatgacagcccacctcagcnnnnnnnt-ctaattaggaccaaaagtcaaatgattaatatt 99  Q
    ||||| |||||||||||||||||||| |  |||||  ||||||||| |||||||||||         |||| || |||||||||| ||||||||||||||    
T  31690094 tcgcccaatcatcacttgccacatgggcatcacgtcactaatgacaacccacctcagcaaaaaaaaactaactatgaccaaaagttaaatgattaatatt 31690193  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
    ||||| | |||||||||| ||||||||| |||||||||||||| || ||||||||||||||||| |||||||| |||||||||||    
T  31690194 tgcagtggcagattggaatgattagtaacttcagggacgaaaa-ttcaatgacctatatttacagggacgaaatacatatttaag 31690277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 547701 - 547819
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||||||||||||||||||||||||||| || | |||||||||||||||||||| || ||||||||||||| |||||| |||||||| || |||    
T  547701 taattaggaccaaaagtcaaatgattaatatttgtagtggcagattggaaggattagtaactttagggacgaaaattcaaatgatctatatttgcaggga 547800  T
Q  168 cgaaaaacatatttaagcc 186  Q
    ||||| |  ||||||||||    
T  547801 cgaaagatctatttaagcc 547819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 23424630 - 23424512
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||  || |||||||| ||||||||| |||||| |||||||||||||||||| |||    
T  23424630 taattaggatcaaaagtcaaatgattaatatttgcaggggcagattgttagaattagtaacttcagggacaaaaattcaaatgacctatatttacaggga 23424531  T
Q  168 cgaaaaacatatttaagcc 186  Q
     |||| || ||||||||||    
T  23424530 tgaaagacctatttaagcc 23424512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 26739835 - 26739714
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacct-----atatttac 162  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||| |||||| ||     ||||||||    
T  26739835 taattaggaccaaacgtcaaatgattaatatttgcagggacatattgaaaggattagtaatttcagggacgaaaattcaaatgatctgatctatatttac 26739736  T
Q  163 aaggacgaaaaacatatttaag 184  Q
    | |||||||| || ||||||||    
T  26739735 agggacgaaagacctatttaag 26739714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 29190425 - 29190545
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||  |||||| |||||  |||||||| || |||    
T  29190425 taattaggactaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagagataaaaattcaaatggtctatatttgcaggga 29190524  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| || ||||||| ||||    
T  29190525 cgaaagacctatttaaacctt 29190545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 40422442 - 40422545
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||| | |||||| ||||||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || |||||||    
T  40422442 tcaaatgattaatatttgcagtggcagatttgaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 40422541  T
Q  184 gcct 187  Q
    ||||    
T  40422542 gcct 40422545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 9632430 - 9632328
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  |||| | ||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| ||| || |||||||    
T  9632430 tcaaatgattaatatttgcaatgacaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacaaaagacctatttaa 9632331  T
Q  184 gcc 186  Q
    |||    
T  9632330 gcc 9632328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 25287990 - 25288177
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgtg-ctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||| |||   ||||||  ||||||||||||||| |||||        |||||||| ||||||||||||||||||||||||    
T  25287990 ctcgcccaatcatcacttgccacttgggtaccacgtcactaatgacagcccacttcagcaaaaaaacctaattagaaccaaaagtcaaatgattaatatt 25288089  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
    ||||||| || | ||  |||||||||||||||||||| ||||| | |||||||||||| || ||  || ||||  |||||||||||||    
T  25288090 tgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagtgatgaaatgcatatttaagcct 25288177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 185
Target Start/End: Complemental strand, 22763715 - 22763596
Alignment:
Q  66 tctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaag 165  Q
    ||||||||||||||    |||||||||||||||||| || |  ||||| ||| ||||||||| |||||||||||||||| ||||||||||||||| ||||    
T  22763715 tctaattaggaccatttttcaaatgattaatatttgtagtggtagattagaaagattagtaacttcagggacgaaaattcaaatgacctatatttgcaag 22763616  T
Q  166 gacgaaaaacatatttaagc 185  Q
    ||||||| || |||||||||    
T  22763615 gacgaaatacctatttaagc 22763596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 22763793 - 22763944
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaa-ttaggaccaaaagtcaaatgattaatat 98  Q
    |||||| |||||||| ||||||||||  | |||||| ||||||||||||||||||||||        | || ||| ||||||||||||||||||||||||    
T  22763793 ctcgcccaatcatcatttgccacatgagcaccacgtcgctaatgacagcccacctcagcaaaaaaagccaaattatgaccaaaagtcaaatgattaatat 22763892  T
Q  99 ttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatg 150  Q
    || ||  |||||||||||||||||||||| ||||| |||||||||| |||||    
T  22763893 ttacaatgacagattggaaggattagtaacttcagagacgaaaattcaaatg 22763944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 9632568 - 9632689
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    |||||||||||||||| ||| |||| |||  ||| ||| |||| ||||||||||||||||| |||| ||||||||||| ||||||||||||||| || ||    
T  9632568 ctaattaggaccaaaactcagatgactaaattttacagtgacacattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcaggg 9632667  T
Q  167 acgaaaaacatatttaagcctt 188  Q
    || ||| || ||||||||||||    
T  9632668 acaaaagacctatttaagcctt 9632689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 27856860 - 27856787
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaa 141  Q
    |||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||    
T  27856860 taattaagaccaaaagtcaaatgattaatatttgcaggggcggattggaaggattagtaacttcagggacgaaa 27856787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 38619906 - 38619824
Alignment:
Q  78 caaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||||||||||||||||  ||||||| | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  38619906 caaaagtcaaatgattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgatctatattt 38619824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 41251391 - 41251512
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||| || ||||||||| |||| ||||| ||||| |||||   ||||||| || ||    
T  41251391 ctaattatgaccaaaagtcaaatgattaatatttgcaggggtagattgaaatgattagtaacttcatggacggaaattcaaatggtttatatttgcaggg 41251490  T
Q  167 acgaaaaacatatttaagcctt 188  Q
    |||||| | |||||||| ||||    
T  41251491 acgaaagatatatttaaccctt 41251512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 38600218 - 38600334
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacg 169  Q
    ||||||||||||| ||||||||||||  ||||||| | | | ||| |||||||||||| ||||||||||||| || ||||||||||||||| || |||||    
T  38600218 attaggaccaaaactcaaatgattaaattttgcagtggctgtttgaaaggattagtaacttcagggacgaaatttcaaatgacctatatttgcagggacg 38600317  T
Q  170 aaaaacatatttaagcc 186  Q
    |||  | ||||||||||    
T  38600318 aaatgcctatttaagcc 38600334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 193
Target Start/End: Complemental strand, 35163681 - 35163490
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagc-----nnnnnnntctaattaggaccaaaagtcaaatgattaatatttg 101  Q
    |||||||||||||||||||| | |||||| |||||||||| |||||||||||             ||||||| |||||||||||||||||||||  ||||    
T  35163681 aatcatcacttgccacatgggcaccacgtcgctaatgacaccccacctcagcaaaaaaaaaaaacctaattatgaccaaaagtcaaatgattaaattttg 35163582  T
Q  102 cagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagccttgatta 193  Q
    ||| | ||||||| |||||| ||||| |||| ||||||||||| ||||| | ||||||| || ||| |||| || ||||||| |||| ||||    
T  35163581 cagtggcagattgaaaggatcagtaacttcaaggacgaaaattcaaatggcttatatttgcagggatgaaagacctatttaaacctttatta 35163490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 4463406 - 4463539
Alignment:
Q  66 tctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaag 165  Q
    ||||||||||||||||  |||| ||||||| | ||||||||| ||| | | |||||||||||||||||||| |||| || ||||| |||||| || || |    
T  4463406 tctaattaggaccaaatttcaagtgattaacaattgcagggaaagaataggaggattagtaagttcagggatgaaatttcaaatggcctatacttgcagg 4463505  T
Q  166 gacgaaaaacatatttaagccttgattaaattac 199  Q
    || ||||  ||||||||||||||| ||| |||||    
T  4463506 gatgaaatgcatatttaagccttgtttatattac 4463539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 184
Target Start/End: Original strand, 15716158 - 15716258
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||||||||||||||| |  | || | | ||||||||||||| |||||||||||||||||||||||| ||||||| || |||||||| || |||||||    
T  15716158 tcaaatgattaatatttgtaatggcaaaatagaaggattagtaacttcagggacgaaaatttaaatgacatatatttgcatggacgaaagacctatttaa 15716257  T
Q  184 g 184  Q
    |    
T  15716258 g 15716258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 71 - 158
Target Start/End: Complemental strand, 36574932 - 36574845
Alignment:
Q  71 ttaggaccaaaagtcaaatgattaatatttgcagggacaga-ttggaaggattagtaagttcagggacgaaaatttaaatgacctatat 158  Q
    |||||||||||| |||||||||||||||||||||||| ||| |||| |||||||||||||||||||| |||| || ||||| |||||||    
T  36574932 ttaggaccaaaactcaaatgattaatatttgcaggga-agatttgggaggattagtaagttcagggatgaaatttcaaatgccctatat 36574845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 157
Target Start/End: Original strand, 7393129 - 7393216
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctata 157  Q
    |||||||| |||  |||||||||||||||||||||||| | | ||| |||||||||||||||||||| ||||| | ||||||||||||    
T  7393129 attaggactaaatttcaaatgattaatatttgcagggataaaatgggaggattagtaagttcagggatgaaaaatcaaatgacctata 7393216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 191
Target Start/End: Complemental strand, 38599066 - 38598959
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||||| || | ||  |||||||||||||||||||| ||||| | ||||| |||||| || || ||| ||||  |||||||||    
T  38599066 tcaaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaa 38598967  T
Q  184 gccttgat 191  Q
    ||||||||    
T  38598966 gccttgat 38598959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 24529946 - 24530040
Alignment:
Q  92 ttaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||||||| | ||||| |||||||||||||| |||||  ||||||||| ||||||||||||||| || | |||||| || ||||||||||    
T  24529946 ttaatatttgcagtggcagataggaaggattagtaacttcagtaacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 24530040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 4970243 - 4970158
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacc 153  Q
    |||||||||| |||  ||||||| ||||||||||||||| || | |||||||||||||||||||||||| |||| || ||||||||    
T  4970243 taattaggactaaatttcaaatgcttaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatgacc 4970158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 187
Target Start/End: Complemental strand, 29574858 - 29574741
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacg 169  Q
    ||||||||||||  |||| ||||||| | ||||||||| | | |||||||||||||||||| ||||| |||| || ||||||||||||||| || ||| |    
T  29574858 attaggaccaaatttcaagtgattaacaattgcagggaaaaaatggaaggattagtaagtttagggatgaaatttcaaatgacctatatttgcagggatg 29574759  T
Q  170 aaaaacatatttaagcct 187  Q
    |||  ||||||| |||||    
T  29574758 aaatgcatattttagcct 29574741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 31690019 - 31690084
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  31690019 gattagtaacttcagggacgaaaattcaaatgacctatattttcagggacgaaaaacctatttaag 31690084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 37713798 - 37713685
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  |  |||||| ||| |||| ||| |||| ||||||||||| ||||||| |||||||| | |||||||| || |||||||    
T  37713798 tcaaatgattaatatttgcaatggtagattgaaagaattaataacttcatggacgaaaattcaaatgacttatatttatagggacgaaagacctatttaa 37713699  T
Q  184 gccttgattaaatt 197  Q
     |||| ||||||||    
T  37713698 acctttattaaatt 37713685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 31689997 - 31689894
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||||||||| |||||||| | || |||||||||||| |||| |||| ||||||||||| |||||  |||||||| || |||| ||| || |||||||    
T  31689997 tcaaatgattaacatttgcagtggcatattggaaggattggtaacttcatggacgaaaattcaaatggtctatatttgcagggacaaaagacctatttaa 31689898  T
Q  184 gcct 187  Q
    ||||    
T  31689897 gcct 31689894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 34665872 - 34665769
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||||||| ||||| | ||| | |||||| ||||| ||| ||||| |||||||||    
T  34665872 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaa 34665773  T
Q  184 gcct 187  Q
    ||||    
T  34665772 gcct 34665769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 27436681 - 27436563
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||||| |||  ||||||||||| || |||||| | || | || || ||||||||| |||||||||||||||| ||| ||||||||||| || |||    
T  27436681 taattaggactaaatttcaaatgattagtaattgcagtggcaaaatgaaaagattagtaacttcagggacgaaaattcaaacgacctatatttgcaggga 27436582  T
Q  168 cgaaaaacatatttaagcc 186  Q
     ||||  ||||||||||||    
T  27436581 tgaaatgcatatttaagcc 27436563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 40525631 - 40525697
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| |||||||||||||||||| ||| |||| || |||||||||    
T  40525631 gattagtaacttcagggacgaaaattcaaatgacctatatttacagggatgaaagacctatttaagc 40525697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 37713820 - 37713889
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    ||||||||| |||||||||||||||| | ||||||||||||| || |||||||| | |||||||||||||    
T  37713820 gattagtaacttcagggacgaaaattcatatgacctatatttgcatggacgaaagatatatttaagcctt 37713889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 7392324 - 7392252
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaa 142  Q
    |||||||| |||  |||||||||||||||||||||||| | | ||| |||||||||||||||||||| |||||    
T  7392324 attaggactaaatttcaaatgattaatatttgcagggataaaatgggaggattagtaagttcagggatgaaaa 7392252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 33497614 - 33497718
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || |||||||| || | ||| |||||||||||| ||| ||| ||||| | ||||| |||||| ||||| ||| ||||| |||||||||    
T  33497614 tcaaatgattagtaattgcaggggcaaaatgggaggattagtaagctcatggatgaaaaatcaaatgccctataattacagggatgaaaagcatatttaa 33497713  T
Q  184 gcctt 188  Q
    |||||    
T  33497714 gcctt 33497718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 41802082 - 41802158
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatt 144  Q
    ||||||||| |||| |||||||||| ||||||||||||| || ||||||| ||||||||| |||| ||| |||||||    
T  41802082 taattaggatcaaatgtcaaatgataaatatttgcaggggcaaattggaatgattagtaacttcaaggatgaaaatt 41802158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 190
Target Start/End: Original strand, 34214526 - 34214633
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcaggga-cgaaaatttaaatgacctatatttacaaggacgaaaaacatattta 182  Q
    ||||||||||| || || ||||| || | ||||||||||||||||||||||||  ||||| | ||| | |||||| ||||| ||| ||||| ||||||||    
T  34214526 tcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggattgaaaaatcaaacggcctataattacagggatgaaaagcatattta 34214625  T
Q  183 agccttga 190  Q
    ||||||||    
T  34214626 agccttga 34214633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 41182023 - 41182086
Alignment:
Q  122 tagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    |||||| |||||||||||||||| ||||||||||||||| || |||||||| || |||||||||    
T  41182023 tagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagc 41182086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 25287916 - 25287981
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || ||||||||    
T  25287916 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 25287981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 27437503 - 27437619
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacg 169  Q
    |||||||| |||  ||||||||||| || |||||| | || | || || ||||||||| |||||||||||||||| ||| | ||||||||| || ||| |    
T  27437503 attaggactaaatttcaaatgattagtaattgcagtggcaaaatgaaaagattagtaacttcagggacgaaaattcaaacggcctatatttgcagggatg 27437602  T
Q  170 aaaaacatatttaagcc 186  Q
    |||  ||||||||||||    
T  27437603 aaatgcatatttaagcc 27437619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 23514226 - 23514314
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaa 95  Q
    |||||||||||||||||||||| |||||| ||||||||||| |||||||| |        |||||||  ||||||||||||||||||||    
T  23514226 aatcatcacttgccacatggacaccacgtggctaatgacagtccacctcatcaaaaaaacctaattaaaaccaaaagtcaaatgattaa 23514314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 35163762 - 35163695
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| |||||  ||||||||| |||||||||||||||| | |||||||| || ||||||||||    
T  35163762 gattagtaacttcagttacgaaaattcaaatgacctatatttatagggacgaaagacttatttaagcc 35163695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 181
Target Start/End: Original strand, 36575996 - 36576096
Alignment:
Q  71 ttaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacga 170  Q
    |||||||||||| |||||||||||||||||||||||          |||||| ||||||||||||| |||| || ||||| | |||||||||| ||| ||    
T  36575996 ttaggaccaaaactcaaatgattaatatttgcaggg----------aggattggtaagttcagggatgaaatttcaaatggcttatatttacagggatga 36576085  T
Q  171 aaaacatattt 181  Q
    || ||||||||    
T  36576086 aatacatattt 36576096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 40422420 - 40422354
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || |||| ||| || ||||||||||    
T  40422420 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggac-aaagacctatttaagcc 40422354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 7653 - 7587
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||| | |||||||||||||||| |||||||||||||||||| ||| ||||  | |||||||||    
T  7653 gattagtgacttcagggacgaaaattcaaatgacctatatttacagggatgaaaggcctatttaagc 7587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 11478269 - 11478335
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| ||||| |||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  11478269 gattagtaacttcagcgacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 11478335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 23424636 - 23424702
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||||||||||| |||||| |||||||| || ||| |||| || |||||||||    
T  23424636 gattagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagacctatttaagc 23424702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 29190419 - 29190353
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| || ||||||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  29190419 gattagtaactttagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 29190353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 33497118 - 33497020
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattta 182  Q
    ||||||||||| || ||||| || || | |||||||||||||||||||| | | ||||| | |||||||||||| ||||| | | ||||| ||||||||    
T  33497118 tcaaatgattagtaattgcaagggcaaaatggaaggattagtaagttcaagaatgaaaaatcaaatgacctataattacatgaatgaaaatcatattta 33497020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 37343042 - 37342976
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||| ||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  37343042 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 37342976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 43866835 - 43866901
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||| ||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  43866835 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacttatttaagc 43866901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 24529780 - 24529716
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaat 149  Q
    ||||||||||||||||||||  | || ||||||||||||||||| ||||||| | |||||||||||    
T  24529780 tcaaatgattaatatttgcactggcacattggaaggattagtaacttcaggg-caaaaatttaaat 24529716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 34666539 - 34666635
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattt 181  Q
    ||||||||||| || || ||||| || | |||||||||||||||||||||||| ||||| | ||| | |||||| |||||  || |||||||||||||    
T  34666539 tcaaatgattagtaattacaggg-caaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagcgatgaaaaacatattt 34666635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 41767732 - 41767655
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatt 144  Q
    |||||| ||||||||  | || |||||||||||||||| | || ||||| ||||||||||||| ||||||| ||||||    
T  41767732 ctaatttggaccaaattttaagtgattaatatttgcagtggcaaattgggaggattagtaagtacagggactaaaatt 41767655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 41773595 - 41773672
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatt 144  Q
    |||||| ||||||||  | || |||||||||||||||| | || ||||| ||||||||||||| ||||||| ||||||    
T  41773595 ctaatttggaccaaattttaagtgattaatatttgcagtggcaaattgggaggattagtaagtacagggactaaaatt 41773672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 41251249 - 41251313
Alignment:
Q  121 ttagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||| |||| ||||||||||| ||||||||||||||| || ||| |||| || |||||||||    
T  41251249 ttagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 41251313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 43073681 - 43073561
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||| ||||||| | ||||||| || |||||||||  | || | |||||| ||||||  |||||| |||||| ||| || |  ||||| || |||    
T  43073681 taattaggatcaaaagtgatatgattagtaattgcagggaaggtttaggaggattggtaagtgtagggacaaaaattcaaacgagccctatttgcaggga 43073582  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| |||||||||||||||    
T  43073581 cgaaacacatatttaagcctt 43073561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 23514123 - 23514020
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||  | || | || |||||||||||| || | || |||||||| |||||| || ||||| ||  ||||||| || |||||||    
T  23514123 tcaaatgattaatatttgcaatggcaaaatgaaaggattagtaactttaaggtcgaaaattcaaatgaactttatttgcagagacgaaagacttatttaa 23514024  T
Q  184 gcct 187  Q
    ||||    
T  23514023 gcct 23514020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 24377281 - 24377214
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacc 153  Q
    ||||| |||||||||||||||  | | ||| |||||||||||||||||||| |||| || ||||||||    
T  24377281 aaatgcttaatatttgcaggggaaaaatgggaggattagtaagttcagggatgaaacttcaaatgacc 24377214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 24529881 - 24529932
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagc 58  Q
    |||||||||||||||||||| | ||||||  |||||||||||||||||||||    
T  24529881 aatcatcacttgccacatgggcaccacgtcactaatgacagcccacctcagc 24529932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 547695 - 547629
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||| ||||||||||| |||||||||||| || || ||| |||| || |||||||||    
T  547695 gattagtaacttcaaggacgaaaattcaaatgacctataattgcagggatgaaagacctatttaagc 547629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 4462241 - 4462179
Alignment:
Q  70 attaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttca 132  Q
    ||||||||||||  |||| ||||||| | ||||||||| ||| ||| ||||||||||||||||    
T  4462241 attaggaccaaatttcaagtgattaacaattgcagggaaagaatgggaggattagtaagttca 4462179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 20096144 - 20096210
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||| |||||||| ||||||| |||||||||||||||  | ||| |||| || |||||||||    
T  20096144 gattagtaacttcagggaagaaaattcaaatgacctatatttgtagggatgaaagacctatttaagc 20096210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 26739841 - 26739906
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    |||||| || ||||||||||||| || ||||||||||||||| |||||| |||| || |||||||||    
T  26739841 gattaggaacttcagggacgaaa-ttcaaatgacctatatttgcaaggatgaaagacctatttaagc 26739906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 36623613 - 36623551
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattt 181  Q
    ||||||||| |||||||| ||||||| ||||||||||||||| || ||| |||| || |||||    
T  36623613 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacctattt 36623551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 15716136 - 15716095
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatattt 160  Q
    ||||||||| ||||| |||||||||| |||||||||||||||    
T  15716136 gattagtaacttcagagacgaaaattcaaatgacctatattt 15716095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 29575867 - 29575980
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||  |||| ||||||| | ||||| ||| ||| ||| ||||||||||| || ||||| |||| || |||||  |||||||| || |||    
T  29575867 taattaggaccaaatttcaagtgattaacaattgcatggaaagaatgggaggattagtaaatttagggatgaaatttcaaatggactatatttgcaggga 29575966  T
Q  168 cgaaaaacatattt 181  Q
     ||||  |||||||    
T  29575967 tgaaatgcatattt 29575980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 34213866 - 34213762
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||  ||| ||||| || | | | |||||||||||| ||||||| ||||| | ||| | |||||| || || ||| ||||| |||||||||    
T  34213866 tcaaatgattaacttttacaggggcaaaataggaggattagtaagctcagggatgaaaaatcaaacggcctataattgcagggatgaaaagcatatttaa 34213767  T
Q  184 gcctt 188  Q
    |||||    
T  34213766 gcctt 34213762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 40933299 - 40933363
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||| |||||  || |||||| ||||||||||||||||||  ||||||| || |||||||    
T  40933299 gattagtaatttcagaaacaaaaattcaaatgacctatatttacagagacgaaagacctatttaa 40933363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 93; Significance: 3e-45; HSPs: 3)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 859 - 979
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||| || ||||||||| |||    
T  859 taattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggccaatatttacaggga 958  T
Q  168 cgaaaaacatatttaagcctt 188  Q
    ||||| |||||||||||||||    
T  959 cgaaagacatatttaagcctt 979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 779 - 592
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgtg-ctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||| |||   ||||||  ||||||||||||||| |||||        |||||||| ||||||||||||||||||||||||    
T  779 ctcgcccaatcatcacttgccacttgggtaccacgtcactaatgacagcccacttcagcaaaaaaacctaattagaaccaaaagtcaaatgattaatatt 680  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
    ||||||| || | ||  |||||||||||||||||||| ||||| | |||||||||||| || ||  || ||||  |||||||||||||    
T  679 tgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagtgatgaaatgcatatttaagcct 592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 853 - 788
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaag 184  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || ||||||||    
T  853 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 92; Significance: 1e-44; HSPs: 3)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 8 - 187
Target Start/End: Original strand, 10867 - 11047
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatttgcaggg 106  Q
    |||||||||||||||||||| | |||||| ||||||||||| ||||||||||        ||||||||||||||||||||||||||||||||||| ||||    
T  10867 aatcatcacttgccacatgggcaccacgtcgctaatgacagtccacctcagcaaaaaaacctaattaggaccaaaagtcaaatgattaatatttgtaggg 10966  T
Q  107 acagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
     | ||||| || ||||||||| |||| ||||||||||| ||||||||||||||| || |||||||| ||||||||||||||    
T  10967 gcggattgaaaagattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcct 11047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 71 - 188
Target Start/End: Complemental strand, 10777 - 10660
Alignment:
Q  71 ttaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacga 170  Q
    |||||||||||||||||||||||||||||||||||| || |||| |||||||| ||| |||||||||||||||| ||||| | ||||||| || ||  ||    
T  10777 ttaggaccaaaagtcaaatgattaatatttgcaggggcatattgaaaggattaataatttcagggacgaaaattcaaatggcttatatttgcaggggtga 10678  T
Q  171 aaaacatatttaagcctt 188  Q
    || || ||||||||||||    
T  10677 aagacctatttaagcctt 10660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 10786 - 10849
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatattta 182  Q
    ||||||||| |||||||||||||||| ||||||||||||||| || ||| |||| || ||||||    
T  10786 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctattta 10849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 68 - 198
Target Start/End: Complemental strand, 10443 - 10313
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||| |||||| |||||||| || |||    
T  10443 taattaggaccaaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgatctatatttgcaggga 10344  T
Q  168 cgaaaaacatatttaagccttgattaaatta 198  Q
    ||||| || |||||||||||| |||||||||    
T  10343 cgaaagacctatttaagcctttattaaatta 10313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 10450 - 10518
Alignment:
Q  120 attagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    |||||||| | |||||||||||||| ||||||||||||||| ||  ||||| |  ||||||||||||||    
T  10450 attagtaactccagggacgaaaattcaaatgacctatatttgcagagacgatagtcatatttaagcctt 10518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 84; Significance: 7e-40; HSPs: 3)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 14079 - 13891
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||| | |||||| ||| |||||||||||         ||||||||||||||||||||||||||||||||    
T  14079 ctcgcccaatcatcacttgccacatgggcaccacatcgctaataacaacccacctcagcaaaataacataattaggaccaaaagtcaaatgattaatatt 13980  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcctt 188  Q
    |||||||  || |||||||||||||||| || || |||||||||| |||| |||||||||||||  ||||||| |||||||||||||||    
T  13979 tgcaggggtaggttggaaggattagtaatttgagtgacgaaaattcaaattacctatatttacagagacgaaagacatatttaagcctt 13891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 14159 - 14242
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatga 151  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||| || ||||||| ||||||    
T  14159 taattaggaccaaaagtcaaatgattaatatttgtaggggcagattggaaggattagtaacttcagtgatgaaaattcaaatga 14242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 14153 - 14089
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||| |||| |||| ||||||||||| ||||||||||||||| || ||| |||| || |||||||    
T  14153 gatttgtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 14089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 11036 - 10853
Alignment:
Q  8 aatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnnt----ctaattaggaccaaaagtcaaatgattaatatttgc 102  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||||||            |||||||||| |||||||||||||||||||||||||    
T  11036 aatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagcaaaaaaaaaaaactaattaggatcaaaagtcaaatgattaatatttgc 10937  T
Q  103 agggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    |  | || | ||||||||||||||| |||  ||||||||||| ||||||||||||||| || |||||||| || ||||||||||    
T  10936 aatggcaaaatggaaggattagtaacttcgtggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 10853  T

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Target: scaffold0279; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 11139 - 11227
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaa 172  Q
    ||||||||||||||||||||  | || | |||||| |||| ||| |||| ||||||||||| |||||||||||||||||| ||||||||    
T  11139 tcaaatgattaatatttgcaatggcaaaatggaagaattattaacttcaaggacgaaaattcaaatgacctatatttacagggacgaaa 11227  T

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Target: scaffold0279; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 11117 - 11050
Alignment:
Q  119 gattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcc 186  Q
    ||||||||| |||| ||||||||||| ||||||||||||||| || |||||||| || ||||||||||    
T  11117 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 11050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 8699 - 8818
Alignment:
Q  69 aattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggac 168  Q
    ||||||||| |||||||||||||||||||||||||| |||| ||||||||||||| ||| |||  ||| | ||||| |||||||||||||||||| ||||    
T  8699 aattaggacaaaaagtcaaatgattaatatttgcagtgacaaattggaaggattaataacttcgcggatggaaattcaaatgacctatatttacagggac 8798  T
Q  169 gaaaaacatatttaagcctt 188  Q
    |||| || ||||||||||||    
T  8799 gaaatacctatttaagcctt 8818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 184
Target Start/End: Complemental strand, 8535 - 8435
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||| |||||||||||||||| |  ||||||| || |||||||    
T  8535 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttaaagagacgaaagacctatttaa 8436  T
Q  184 g 184  Q
    |    
T  8435 g 8435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8631 - 8687
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctca 56  Q
    |||||| |||||||||||||||||||| | |||| |  |||||||||||||||||||    
T  8631 ctcgcccaatcatcacttgccacatgggctccacatcactaatgacagcccacctca 8687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 12119 - 12017
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||||||||| ||  || |||||| |||||||| ||| ||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||||    
T  12119 aaatgattaatatttacaatgaaagattgaaaggattactaacttcagggacaaaaatttaaatgatctatatttacagagacgaaaaacatatttaagc 12020  T
Q  186 ctt 188  Q
    |||    
T  12019 ctt 12017  T

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Target: scaffold0202 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 14433 - 14619
Alignment:
Q  1 ctcgccaaatcatcacttgccacatggacgccacgt-gctaatgacagcccacctcagcnnnnnnntctaattaggaccaaaagtcaaatgattaatatt 99  Q
    |||||| |||||||||||||||||||| | |||| | | |||||||| ||||| |||||        ||||||| |  ||||||| ||||||||||||||    
T  14433 ctcgcccaatcatcacttgccacatgggcaccacatcgttaatgacaacccacgtcagcaaaaaac-ctaattatgttcaaaagttaaatgattaatatt 14531  T
Q  100 tgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagcct 187  Q
    | ||| | |||||| ||||||||||||| |||| ||||||||||| |||||||||||||||||| ||| |||  || |||||||||||    
T  14532 tacagtggcagatttgaaggattagtaacttcaaggacgaaaattcaaatgacctatatttacagggaggaaggacctatttaagcct 14619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 14337 - 14238
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||| |||||||||||||| | || |||||||||||||||||  ||| ||||||||||| ||||||| ||||||| || |||||||| || |||||||    
T  14337 tcaaattattaatatttgcagtggcaaattggaaggattagtaacctcaaggacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaa 14238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 120465 - 120584
Alignment:
Q  67 ctaattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagg 166  Q
    ||||||| ||||||||||||||||||||||||||| || |||| | ||||||||||| ||| ||  |||||||||||| ||||||| ||||||| ||  |    
T  120465 ctaattaagaccaaaagtcaaatgattaatatttgtagtgacaaaatggaaggattaataactt--gggacgaaaattgaaatgacatatatttgcagag 120562  T
Q  167 acgaaaaacatatttaagcctt 188  Q
    |||||| |||||||||||||||    
T  120563 acgaaagacatatttaagcctt 120584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 196
Target Start/End: Complemental strand, 120301 - 120195
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    |||||||||||||||||||||   || |||||||||||||||||      ||| ||||||| |||||| ||| |||| || |||||||| || |||||||    
T  120301 tcaaatgattaatatttgcagttgcatattggaaggattagtaa------ggatgaaaattcaaatgatctacatttgcagggacgaaagacctatttaa 120208  T
Q  184 gccttgattaaat 196  Q
     |||||| |||||    
T  120207 accttgaataaat 120195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 262441 - 262543
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    |||||||||||||||||||||  | | ||| |||||||||||||||||||| ||||| | |||||||||||| ||||| ||| ||||  |||||||||||    
T  262441 aaatgattaatatttgcaggggaaaaatgggaggattagtaagttcagggatgaaaaatcaaatgacctataattacagggatgaaatgcatatttaagc 262540  T
Q  186 ctt 188  Q
    |||    
T  262541 ctt 262543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 261119 - 261000
Alignment:
Q  68 taattaggaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaagga 167  Q
    |||||||| | |||| ||||||||||||||||||||||| || | ||| ||||||||||| |||| ||| ||||| | |||||||||||| || || |||    
T  261119 taattaggtcgaaaattcaaatgattaatatttgcaggggcaaaatgggaggattagtaaattcatggatgaaaaatcaaatgacctataattgcaggga 261020  T
Q  168 cgaaaaacatatttaagcct 187  Q
     ||||  |||||||||||||    
T  261019 tgaaatgcatatttaagcct 261000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 14375 - 14478
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || ||||||||  | | ||| |||||||||||| ||||||| ||||| | ||||| |||||| ||||| ||  ||||| |||||||||    
T  14375 tcaaatgattagtaattgcaggggtaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacaggggtgaaaagcatatttaa 14474  T
Q  184 gcct 187  Q
    ||||    
T  14475 gcct 14478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 198
Target Start/End: Complemental strand, 13236 - 13122
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || |||||||| || | ||| ||||||| |||  |||| || ||||| | |||||  ||||||||||| ||| ||||| |||||||||    
T  13236 tcaaatgattagtaattgcaggggcaaaatgggaggattactaaactcagagatgaaaaatcaaatggtctatatttacagggatgaaaagcatatttaa 13137  T
Q  184 gccttgattaaatta 198  Q
    ||||| |||| ||||    
T  13136 gcctttattatatta 13122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 73211 - 73109
Alignment:
Q  84 tcaaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaa 183  Q
    ||||||||||| || || ||||| || | ||| |||||||||||| ||||||| ||||| | ||||| || ||| ||||| ||| ||||| |||||||||    
T  73211 tcaaatgattagtaattacaggggcaaaatgggaggattagtaagctcagggatgaaaagtcaaatggcccataattacagggatgaaaagcatatttaa 73112  T
Q  184 gcc 186  Q
    |||    
T  73111 gcc 73109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 186
Target Start/End: Complemental strand, 13709 - 13609
Alignment:
Q  86 aaatgattaatatttgcagggacagattggaaggattagtaagttcagggacgaaaatttaaatgacctatatttacaaggacgaaaaacatatttaagc 185  Q
    ||||||||||| |||  |||| || | |||||||||||||||| ||||||| ||||| | ||||| |||||| || || ||| ||||  |||||||||||    
T  13709 aaatgattaatttttataggggcaaaatggaaggattagtaagctcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagc 13610  T
Q  186 c 186  Q
    |    
T  13609 c 13609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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