View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14220_low_4 (Length: 290)

Name: NF14220_low_4
Description: NF14220
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14220_low_4
NF14220_low_4
[»] chr7 (25 HSPs)
chr7 (22-278)||(18873164-18873420)
chr7 (27-278)||(15167979-15168230)
chr7 (31-278)||(10895795-10896042)
chr7 (23-278)||(14422789-14423043)
chr7 (16-278)||(12709833-12710095)
chr7 (16-278)||(13122904-13123166)
chr7 (27-278)||(16009382-16009631)
chr7 (16-266)||(13743526-13743774)
chr7 (16-235)||(12590633-12590850)
chr7 (16-235)||(13007281-13007497)
chr7 (29-223)||(16677152-16677348)
chr7 (29-223)||(17651388-17651584)
chr7 (3-82)||(21230936-21231015)
chr7 (3-82)||(20311026-20311107)
chr7 (27-82)||(11382871-11382926)
chr7 (27-82)||(11389348-11389403)
chr7 (1-82)||(148619-148700)
chr7 (27-146)||(13679428-13679548)
chr7 (26-81)||(2971254-2971309)
chr7 (26-81)||(20906461-20906516)
chr7 (27-81)||(11311059-11311113)
chr7 (21-62)||(831628-831669)
chr7 (21-62)||(1196808-1196849)
chr7 (21-62)||(34958578-34958619)
chr7 (27-83)||(46625961-46626017)
[»] chr5 (15 HSPs)
chr5 (22-278)||(22750945-22751201)
chr5 (1-278)||(38144511-38144786)
chr5 (27-278)||(28370055-28370304)
chr5 (27-278)||(19512191-19512441)
chr5 (22-235)||(23528479-23528690)
chr5 (3-82)||(22438723-22438803)
chr5 (27-91)||(18407944-18408008)
chr5 (27-91)||(23111200-23111264)
chr5 (1-82)||(42961566-42961647)
chr5 (1-42)||(1856456-1856497)
chr5 (1-42)||(21674426-21674467)
chr5 (26-81)||(19236900-19236955)
chr5 (15-141)||(34830024-34830150)
chr5 (26-79)||(22461158-22461211)
chr5 (26-79)||(22467782-22467835)
[»] chr3 (24 HSPs)
chr3 (27-278)||(14762758-14763009)
chr3 (29-276)||(38310802-38311049)
chr3 (29-259)||(20247791-20248021)
chr3 (29-266)||(24192771-24193009)
chr3 (27-278)||(9534133-9534382)
chr3 (26-278)||(23370505-23370756)
chr3 (29-278)||(55499104-55499353)
chr3 (26-278)||(24933828-24934077)
chr3 (3-195)||(16801444-16801635)
chr3 (16-235)||(41455087-41455304)
chr3 (27-88)||(18929239-18929300)
chr3 (27-91)||(17240513-17240577)
chr3 (26-81)||(13302240-13302295)
chr3 (26-81)||(13323787-13323842)
chr3 (26-140)||(10389443-10389557)
chr3 (26-140)||(10414532-10414646)
chr3 (26-140)||(10421202-10421316)
chr3 (1-42)||(24122232-24122273)
chr3 (26-81)||(12033444-12033499)
chr3 (26-81)||(13312896-13312951)
chr3 (26-81)||(17131732-17131787)
chr3 (26-81)||(51301589-51301644)
chr3 (1-42)||(13967773-13967814)
chr3 (1-42)||(13973248-13973289)
[»] scaffold0026 (2 HSPs)
scaffold0026 (10-278)||(11834-12102)
scaffold0026 (26-278)||(111491-111741)
[»] chr6 (23 HSPs)
chr6 (27-260)||(23057760-23057993)
chr6 (16-278)||(29614136-29614398)
chr6 (27-278)||(23839003-23839253)
chr6 (16-278)||(10986170-10986431)
chr6 (3-278)||(18800242-18800516)
chr6 (27-262)||(4477678-4477912)
chr6 (16-161)||(930085-930229)
chr6 (29-278)||(21565214-21565462)
chr6 (16-235)||(12168212-12168428)
chr6 (16-235)||(19287121-19287337)
chr6 (16-235)||(19785859-19786075)
chr6 (16-235)||(19878305-19878521)
chr6 (16-235)||(19884081-19884297)
chr6 (26-215)||(34639986-34640173)
chr6 (26-215)||(34646660-34646847)
chr6 (26-140)||(25469704-25469816)
chr6 (3-82)||(24512820-24512899)
chr6 (27-223)||(9187352-9187550)
chr6 (27-83)||(25397172-25397228)
chr6 (27-83)||(19471335-19471391)
chr6 (27-83)||(25348486-25348542)
chr6 (26-110)||(31252394-31252478)
chr6 (29-83)||(25598643-25598697)
[»] scaffold1773 (1 HSPs)
scaffold1773 (19-278)||(983-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (19-278)||(49984-50241)
[»] chr4 (12 HSPs)
chr4 (16-278)||(8045822-8046083)
chr4 (16-281)||(11847908-11848179)
chr4 (26-215)||(53483573-53483760)
chr4 (5-82)||(15408139-15408216)
chr4 (26-216)||(27906130-27906321)
chr4 (27-83)||(8834895-8834951)
chr4 (27-83)||(13888641-13888697)
chr4 (29-110)||(14486632-14486713)
chr4 (27-83)||(15245215-15245271)
chr4 (32-83)||(22724691-22724742)
chr4 (21-62)||(15747551-15747592)
chr4 (27-83)||(15308120-15308176)
[»] scaffold0029 (1 HSPs)
scaffold0029 (16-235)||(111728-111948)
[»] scaffold0924 (1 HSPs)
scaffold0924 (16-278)||(740-1002)
[»] chr2 (19 HSPs)
chr2 (27-278)||(19661454-19661703)
chr2 (27-278)||(6483523-6483772)
chr2 (27-278)||(6486990-6487239)
chr2 (16-223)||(26583687-26583892)
chr2 (29-278)||(23089057-23089305)
chr2 (29-278)||(23878813-23879060)
chr2 (27-278)||(23101463-23101713)
chr2 (26-280)||(5706023-5706274)
chr2 (27-91)||(23265133-23265197)
chr2 (27-91)||(23280201-23280265)
chr2 (27-88)||(21908353-21908414)
chr2 (1-41)||(6260146-6260186)
chr2 (27-83)||(24661576-24661632)
chr2 (1-34)||(19665048-19665081)
chr2 (26-81)||(10577-10632)
chr2 (16-207)||(23168288-23168483)
chr2 (16-207)||(23579545-23579740)
chr2 (26-81)||(25180929-25180984)
chr2 (17-98)||(26885166-26885246)
[»] scaffold0025 (1 HSPs)
scaffold0025 (29-266)||(14398-14635)
[»] chr8 (15 HSPs)
chr8 (29-278)||(8727735-8727984)
chr8 (16-278)||(23866418-23866680)
chr8 (26-278)||(44477428-44477678)
chr8 (26-278)||(44492586-44492836)
chr8 (1-278)||(27940826-27941104)
chr8 (16-235)||(17054440-17054656)
chr8 (27-136)||(18614217-18614327)
chr8 (27-91)||(23482053-23482117)
chr8 (6-82)||(14056543-14056619)
chr8 (6-82)||(25111976-25112052)
chr8 (27-83)||(39364919-39364975)
chr8 (27-81)||(29643386-29643440)
chr8 (26-81)||(24320670-24320725)
chr8 (1-42)||(30765884-30765925)
chr8 (27-83)||(21931696-21931752)
[»] chr1 (12 HSPs)
chr1 (27-278)||(20437024-20437274)
chr1 (16-235)||(41111884-41112100)
chr1 (27-91)||(32651563-32651627)
chr1 (27-82)||(19663517-19663572)
chr1 (27-91)||(18712790-18712854)
chr1 (27-83)||(20805320-20805376)
chr1 (27-82)||(11158093-11158148)
chr1 (29-83)||(10811785-10811839)
chr1 (26-81)||(20851132-20851187)
chr1 (26-81)||(20857759-20857814)
chr1 (26-81)||(21706276-21706331)
chr1 (26-81)||(21710818-21710873)
[»] scaffold0247 (1 HSPs)
scaffold0247 (3-278)||(11146-11420)
[»] scaffold0553 (1 HSPs)
scaffold0553 (26-278)||(10195-10446)
[»] scaffold0544 (1 HSPs)
scaffold0544 (26-278)||(1525-1776)
[»] scaffold0117 (2 HSPs)
scaffold0117 (16-278)||(1887-2148)
scaffold0117 (16-278)||(8564-8825)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-278)||(17973-18250)
[»] scaffold0058 (1 HSPs)
scaffold0058 (16-266)||(109-356)
[»] scaffold0154 (1 HSPs)
scaffold0154 (3-223)||(30715-30936)
[»] scaffold0476 (1 HSPs)
scaffold0476 (29-278)||(3295-3544)
[»] scaffold0077 (1 HSPs)
scaffold0077 (29-278)||(3624-3872)
[»] scaffold0796 (2 HSPs)
scaffold0796 (21-217)||(1727-1920)
scaffold0796 (21-217)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (22-109)||(904-991)
scaffold0456 (22-109)||(8049-8136)
scaffold0456 (170-266)||(806-901)
scaffold0456 (170-266)||(7951-8046)
[»] scaffold0634 (1 HSPs)
scaffold0634 (186-278)||(3466-3558)
[»] scaffold0129 (1 HSPs)
scaffold0129 (20-138)||(45268-45386)
[»] scaffold0107 (1 HSPs)
scaffold0107 (3-82)||(40508-40587)
[»] scaffold0310 (1 HSPs)
scaffold0310 (3-82)||(17643-17723)
[»] scaffold0019 (1 HSPs)
scaffold0019 (3-82)||(135473-135552)
[»] scaffold0222 (1 HSPs)
scaffold0222 (27-91)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (27-91)||(116887-116951)
[»] scaffold0124 (1 HSPs)
scaffold0124 (27-82)||(34276-34331)
[»] scaffold0235 (1 HSPs)
scaffold0235 (3-80)||(22569-22646)
[»] scaffold0461 (1 HSPs)
scaffold0461 (27-91)||(8-72)
[»] scaffold0146 (1 HSPs)
scaffold0146 (27-91)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (27-91)||(101928-101992)
[»] scaffold0815 (1 HSPs)
scaffold0815 (16-78)||(1453-1515)
[»] scaffold0261 (1 HSPs)
scaffold0261 (16-216)||(23559-23760)
[»] scaffold2054 (1 HSPs)
scaffold2054 (16-115)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (26-110)||(5857-5941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (27-146)||(1321-1441)
[»] scaffold0138 (1 HSPs)
scaffold0138 (27-83)||(12296-12352)
[»] scaffold0139 (1 HSPs)
scaffold0139 (27-82)||(14997-15052)
[»] scaffold0790 (1 HSPs)
scaffold0790 (15-48)||(5487-5520)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-34)||(2223-2256)
[»] scaffold0001 (1 HSPs)
scaffold0001 (17-98)||(493019-493099)
[»] scaffold0096 (1 HSPs)
scaffold0096 (23-83)||(39503-39563)
[»] scaffold0034 (1 HSPs)
scaffold0034 (29-216)||(73149-73337)
[»] scaffold0348 (1 HSPs)
scaffold0348 (26-81)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (26-81)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (26-81)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (27-81)||(1913-1967)
[»] scaffold0453 (1 HSPs)
scaffold0453 (26-110)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (27-83)||(2628-2684)


Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 22 - 278
Target Start/End: Complemental strand, 18873420 - 18873164
Alignment:
Q  22 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 121  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873420 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 18873321  T
Q  122 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 221  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  18873320 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 18873221  T
Q  222 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  18873220 cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 18873164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 27 - 278
Target Start/End: Complemental strand, 15168230 - 15167979
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 15168131  T
Q  127 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 226  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  15168130 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 15168031  T
Q  227 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  15168030 attgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 15167979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 31 - 278
Target Start/End: Original strand, 10895795 - 10896042
Alignment:
Q  31 gtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttgat 129  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  130 gatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaatt 229  Q
    ||||||||||| ||||| |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  10895895 gatgattctgaggggaa-tgggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 10895993  T
Q  230 gattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  10895994 gattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 10896042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 23 - 278
Target Start/End: Complemental strand, 14423043 - 14422789
Alignment:
Q  23 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttag 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14423043 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 14422944  T
Q  122 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 221  Q
    |||||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||    
T  14422943 ggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgat 14422845  T
Q  222 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  14422844 cataaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 14422789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 16 - 278
Target Start/End: Original strand, 12709833 - 12710095
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  12709833 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 12709931  T
Q  116 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 214  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  12709932 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 12710030  T
Q  215 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||| |||| |||||  ||| ||||||| ||||||||||||||||||||||||||||||||    
T  12710031 ctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatg 12710095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 16 - 278
Target Start/End: Original strand, 13122904 - 13123166
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13122904 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13123002  T
Q  116 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 214  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  13123003 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 13123101  T
Q  215 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||| |||| |||||  ||| ||||||| ||||||||||||||||||||||||||||||||    
T  13123102 ctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatg 13123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 27 - 278
Target Start/End: Complemental strand, 16009631 - 16009382
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 126  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggttt 16009532  T
Q  127 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 226  Q
    ||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  16009531 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 16009433  T
Q  227 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    | ||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  16009432 actgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 16009382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 16 - 266
Target Start/End: Complemental strand, 13743774 - 13743526
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13743774 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13743676  T
Q  116 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 215  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||||||||| | ||||| |||  |||||||| |||| |||||||||||||| ||||    
T  13743675 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctatgttattgc 13743576  T
Q  216 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 266  Q
    ||||||||||||||| |||| |||||||   | |||||| |||||||||||    
T  13743575 tgtgatcataaattggttga-aattatgcttggttggataaattgatgaat 13743526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 235
Target Start/End: Original strand, 12590633 - 12590850
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12590633 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaa 12590731  T
Q  116 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 215  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| ||||||||| ||||||| ||||||||||    
T  12590732 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgc 12590829  T
Q  216 tgtgat-cataaattgattga 235  Q
    ||| || ||| ||||||||||    
T  12590830 tgtaatccattaattgattga 12590850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 13007497 - 13007281
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  13007497 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 13007399  T
Q  116 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 215  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  13007398 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 13007302  T
Q  216 tgtgat-cataaattgattga 235  Q
    ||| || ||| ||||||||||    
T  13007301 tgtaatccatgaattgattga 13007281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 16677348 - 16677152
Alignment:
Q  29 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 126  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 16677249  T
Q  127 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 223  Q
    |||||||||| ||| | | |  | ||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||||||||||    
T  16677248 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 16677152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 17651584 - 17651388
Alignment:
Q  29 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 126  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 17651485  T
Q  127 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 223  Q
    |||||||||| ||| | | |  | ||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||||||||||    
T  17651484 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 17651388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 21230936 - 21231015
Alignment:
Q  3 tgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 82  Q
    ||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  21230936 tgctgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 20311026 - 20311107
Alignment:
Q  3 tgctgtgtaatcattctgcaaaa--ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 82  Q
    ||||||| |||| ||||||||||  |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  20311026 tgctgtgcaatctttctgcaaaaatctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 11382871 - 11382926
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 82  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 11389348 - 11389403
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 82  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 148700 - 148619
Alignment:
Q  1 tgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 82  Q
    |||| |||||||||||||||||||||||||||||||||||| ||| |  || || || ||||| |||  |||||||||||||    
T  148700 tgtgttgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatggtttctgaaaattg 148619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 13679548 - 13679428
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 125  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||  || ||| | || ||| ||| ||||  ||||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt 13679449  T
Q  126 tgatgatgattctgaagggaa 146  Q
    ||||| ||||| |||| ||||    
T  13679448 tgatgctgattttgaaaggaa 13679428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 2971309 - 2971254
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  2971309 ctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 20906461 - 20906516
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20906461 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 11311113 - 11311059
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||| ||||||    
T  11311113 taaggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 831628 - 831669
Alignment:
Q  21 caaaactaaggtaagggtgagactatctctcgataatcataa 62  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  831628 caaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 1196808 - 1196849
Alignment:
Q  21 caaaactaaggtaagggtgagactatctctcgataatcataa 62  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  1196808 caaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 34958619 - 34958578
Alignment:
Q  21 caaaactaaggtaagggtgagactatctctcgataatcataa 62  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  34958619 caaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 46626017 - 46625961
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 83  Q
    |||| |||||||||||||| ||||| || || ||||| ||||||||| |||||||||    
T  46626017 taagataagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 22 - 278
Target Start/End: Complemental strand, 22751201 - 22750945
Alignment:
Q  22 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 121  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751201 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 22751102  T
Q  122 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 221  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  22751101 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 22751002  T
Q  222 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  22751001 cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 22750945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 38144511 - 38144786
Alignment:
Q  1 tgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38144511 tgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt 38144610  T
Q  101 ggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaactt 200  Q
    |||| |||||||||||||||||||||||||||||||||| |||| |||||||| | |||||||||||||| ||||||| ||||||| |||||||||||||    
T  38144611 ggaaaataaattgagggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaactt 38144709  T
Q  201 aatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||  ||||| |||||||||||||||||||| ||||| ||  |||||||||||||||||||  | |||||||||    
T  38144710 aatctatactgttgttgtgatcataaattgattga-aattacgattgattggatgaattgatgaagatttgtatgatg 38144786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 27 - 278
Target Start/End: Original strand, 28370055 - 28370304
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 126  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 28370154  T
Q  127 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 226  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  28370155 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 28370253  T
Q  227 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    ||||||||| ||||||||  ||| |||||||||||||||  | |||||||||    
T  28370254 attgattga-aattatgattgatgggatgaattgatgaagatttgtatgatg 28370304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 27 - 278
Target Start/End: Complemental strand, 19512441 - 19512191
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 125  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 19512342  T
Q  126 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 225  Q
    ||||||||||| || |||| |||||||| | |||||||||||||| ||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  19512341 tgatgatgattttg-aggggaatgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 19512243  T
Q  226 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  19512242 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 19512191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 22 - 235
Target Start/End: Complemental strand, 23528690 - 23528479
Alignment:
Q  22 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 121  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||  |||||    
T  23528690 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 23528592  T
Q  122 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 221  Q
    ||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||||| ||    
T  23528591 ggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaat 23528494  T
Q  222 -cataaattgattga 235  Q
     ||| ||||||||||    
T  23528493 ccatgaattgattga 23528479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 22438723 - 22438803
Alignment:
Q  3 tgctgtgtaatcattctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 82  Q
    ||||||| |||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  22438723 tgctgtgcaatctttctgcaaaatctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 18407944 - 18408008
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 91  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 23111200 - 23111264
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 91  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 42961647 - 42961566
Alignment:
Q  1 tgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 82  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    
T  42961647 tgtgctgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 42961566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1856456 - 1856497
Alignment:
Q  1 tgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 42  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  1856456 tgtgctgtttaatctttctgcaaaactaaggtaagggtgaga 1856497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21674426 - 21674467
Alignment:
Q  1 tgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 42  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  21674426 tgtgctgtttaatctttctgcaaaactaaggtaagggtgaga 21674467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 19236955 - 19236900
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  19236955 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 34830150 - 34830024
Alignment:
Q  15 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattg 113  Q
    |||||||||  |||||||||||||| || ||||| || |||||  |||| ||||||||||||||||  | ||||| | |||||| | |||||| ||||||    
T  34830150 attctgcaattctaaggtaagggtgggattatctttcaataatt-taatgtataatttctgaaaatcaatctaatagaatagttcttgaagataaaattg 34830052  T
Q  114 agggttagggtttgatgatgattctgaa 141  Q
    ||  ||||||| ||||| ||||| ||||    
T  34830051 agaattagggtatgatgctgattttgaa 34830024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 22461211 - 22461158
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 79  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22461211 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 22467835 - 22467782
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 79  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22467835 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 27 - 278
Target Start/End: Original strand, 14762758 - 14763009
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 14762857  T
Q  127 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 226  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  14762858 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 14762957  T
Q  227 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  14762958 attgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 14763009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 29 - 276
Target Start/End: Original strand, 38310802 - 38311049
Alignment:
Q  29 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttga 38310901  T
Q  129 tgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaat 228  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  38310902 tgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 38311001  T
Q  229 tgattgagaattatgagcgattggatgaattgatgaatttgtgtatga 276  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||||    
T  38311002 tgattgaaaattatgagtgattggatgaatggatgaatttgtgtatga 38311049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 29 - 259
Target Start/End: Original strand, 20247791 - 20248021
Alignment:
Q  29 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 128  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 20247890  T
Q  129 tgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaat 228  Q
    ||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  20247891 tgatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 20247990  T
Q  229 tgattgagaattatgagcgattggatgaatt 259  Q
    ||||||| ||||||||| |||||||||||||    
T  20247991 tgattgaaaattatgagtgattggatgaatt 20248021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 29 - 266
Target Start/End: Complemental strand, 24193009 - 24192771
Alignment:
Q  29 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 127  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 24192910  T
Q  128 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtg-atcataa 226  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |||||||    
T  24192909 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtgaatcataa 24192810  T
Q  227 attgattgagaattatgagcgattggatgaattgatgaat 266  Q
    | ||||||| || |||||  |||||||| |||||||||||    
T  24192809 actgattga-aaatatgattgattggataaattgatgaat 24192771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 27 - 278
Target Start/End: Complemental strand, 9534382 - 9534133
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 126  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 9534283  T
Q  127 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 226  Q
    ||||||||||||| || | |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  |||||  ||||||||||    
T  9534282 gatgatgattctg-agtggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgtcgtgatcataa 9534184  T
Q  227 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    ||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  9534183 attgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 9534133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 26 - 278
Target Start/End: Original strand, 23370505 - 23370756
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 124  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  23370505 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 23370604  T
Q  125 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 224  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  23370605 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 23370703  T
Q  225 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  23370704 aaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 23370756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 278
Target Start/End: Original strand, 55499104 - 55499353
Alignment:
Q  29 aggtaagggtgagactatctctcgataatc-ataatctataatttctg-aaaattgacctaattgcatagttttggaagataaa-ttgagggttagggtt 125  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| | ||||||||||||| ||| ||   ||| | |||||| |||||||||||||||    
T  55499104 aggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttg-aggataaaattgagggttagggtt 55499202  T
Q  126 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 225  Q
    ||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| | |||||| |||||||| ||||||||||   |||||||||||||||    
T  55499203 tgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatacagttgctgtgatcata 55499301  T
Q  226 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||||| || ||| |  |||||||||||||||| || || |||||||||    
T  55499302 aattgattga-aaatataattgattggatgaattgatcaagttttgtatgatg 55499353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 26 - 278
Target Start/End: Original strand, 24933828 - 24934077
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 125  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||   ||||||||    
T  24933828 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtt 24933926  T
Q  126 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat-cat 224  Q
    ||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||||||||||||  || |||    
T  24933927 tgatgatgattctgatgg--aatgagtaaagatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgttgttgctgcaatccat 24934024  T
Q  225 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
     |||||||||| | || |||   |||| |||||||||||||| | |||||||||    
T  24934025 taattgattga-atttttgatgtattgtatgaattgatgaatatttgtatgatg 24934077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 195
Target Start/End: Original strand, 16801444 - 16801635
Alignment:
Q  3 tgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg 102  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||| ||||| ||| ||| |    
T  16801444 tgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttg 16801542  T
Q  103 aagat-aaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaa 195  Q
    ||||| ||||||| |||||||| |||||||||||| ||| | |||  | ||||| |||||||||| | || |||||| | ||||| ||||||||    
T  16801543 aagataaaattgaaggttaggg-ttgatgatgattttgaggagaatggtgtaatgatcatgttaaatatgctgtaatgtgatgtttagaatgaa 16801635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 16 - 235
Target Start/End: Original strand, 41455087 - 41455304
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||   |||     
T  41455087 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataggatgaa 41455185  T
Q  116 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 215  Q
      |||||| |||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||  ||||||||| ||||||| || | |||||    
T  41455186 aattagggattgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttgaaatttaatgtcaagaatgaaatcttaatccatatggttgc 41455283  T
Q  216 tgtgat-cataaattgattga 235  Q
    ||| || ||| ||||||||||    
T  41455284 tgtaatccatgaattgattga 41455304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 18929300 - 18929239
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 88  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 17240513 - 17240577
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 91  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 13302240 - 13302295
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13302240 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 13323787 - 13323842
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13323787 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 10389443 - 10389557
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 125  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10389443 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10389542  T
Q  126 tgatgatgattctga 140  Q
    |||||||||||||||    
T  10389543 tgatgatgattctga 10389557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 10414532 - 10414646
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 125  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10414532 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10414631  T
Q  126 tgatgatgattctga 140  Q
    |||||||||||||||    
T  10414632 tgatgatgattctga 10414646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 10421202 - 10421316
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 125  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10421202 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10421301  T
Q  126 tgatgatgattctga 140  Q
    |||||||||||||||    
T  10421302 tgatgatgattctga 10421316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 24122232 - 24122273
Alignment:
Q  1 tgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 42  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  24122232 tgtgctgtttaatctttctgcaaaactaaggtaagggtgaga 24122273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 12033444 - 12033499
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  12033444 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 13312896 - 13312951
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||| ||||||||    
T  13312896 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 17131787 - 17131732
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  17131787 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 51301644 - 51301589
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  51301644 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13967773 - 13967814
Alignment:
Q  1 tgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 42  Q
    |||||||| | ||| |||||||||||||||||||||||||||    
T  13967773 tgtgctgttttatctttctgcaaaactaaggtaagggtgaga 13967814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13973248 - 13973289
Alignment:
Q  1 tgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 42  Q
    |||||||| | ||| |||||||||||||||||||||||||||    
T  13973248 tgtgctgttttatctttctgcaaaactaaggtaagggtgaga 13973289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 221; Significance: 1e-121; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 10 - 278
Target Start/End: Original strand, 11834 - 12102
Alignment:
Q  10 taatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 109  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11834 taatctttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 11933  T
Q  110 attgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgt 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||| |||    
T  11934 attgagagttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgt 12033  T
Q  210 tgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    ||||||||||||||||| |||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  12034 tgttgctgtgatcataagttgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 12102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 26 - 278
Target Start/End: Complemental strand, 111741 - 111491
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 125  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  111741 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 111642  T
Q  126 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 225  Q
    |||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  111641 tgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 111543  T
Q  226 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  111542 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 111491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-113; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 27 - 260
Target Start/End: Complemental strand, 23057993 - 23057760
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057993 taaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 23057894  T
Q  127 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 226  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  23057893 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 23057794  T
Q  227 attgattgagaattatgagcgattggatgaattg 260  Q
    ||||||||| ||||||||| ||||||||||||||    
T  23057793 attgattgaaaattatgagtgattggatgaattg 23057760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 16 - 278
Target Start/End: Original strand, 29614136 - 29614398
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg-aagataaattga 114  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||| || |||||||||    
T  29614136 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattga 29614235  T
Q  115 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 214  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||| ||  |||||| |||||||||||||||||| ||||||||    
T  29614236 gggttagggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgt-attgaatgtttagaatgaaaacttaatctttgttgttg 29614334  T
Q  215 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||||||| |||||||| | ||||||  ||||||||||||||||||||||||||||||||    
T  29614335 ctgtgatcataacttgattgaaatttatgaatgattggatgaattgatgaatttgtgtatgatg 29614398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 27 - 278
Target Start/End: Complemental strand, 23839253 - 23839003
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagt-tttggaagataaattgagggttagggtt 125  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtt 23839154  T
Q  126 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 225  Q
    ||||||||||||| ||||| |||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  23839153 tgatgatgattct-aaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata 23839055  T
Q  226 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  23839054 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 23839003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 16 - 278
Target Start/End: Original strand, 10986170 - 10986431
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattga 114  Q
    ||||||||  ||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  10986170 ttctgcaattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattga 10986269  T
Q  115 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 214  Q
    |||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||    
T  10986270 gggttagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttg 10986368  T
Q  215 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
     |||||||||||||||||||| ||||| ||  |||||||||||||||||||  | |||||||||    
T  10986369 ttgtgatcataaattgattga-aattacgattgattggatgaattgatgaagatttgtatgatg 10986431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 3 - 278
Target Start/End: Complemental strand, 18800516 - 18800242
Alignment:
Q  3 tgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg 102  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18800516 tgctgtgtaatccttctgcaaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttgg 18800417  T
Q  103 aagata-aattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaactta 201  Q
    || ||| ||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||||||| | ||||||| ||||||| ||||    
T  18800416 aaaatagaattgagggttagggtttgatgatgattctggaggg-aatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatctta 18800318  T
Q  202 atctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||| |||||| |||||||| ||||||||||| || ||| |  ||||||||||||||||||| ||  ||||||||    
T  18800317 atctatattgttgttgtgatcacaaattgattga-aaatataattgattggatgaattgatgaagtttggtatgatg 18800242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 27 - 262
Target Start/End: Complemental strand, 4477912 - 4477678
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 125  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 4477813  T
Q  126 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 225  Q
    |||||||||||||| |||| |||||||| | |||||| ||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||||||    
T  4477812 tgatgatgattctg-aggggaatgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 4477714  T
Q  226 aattgattgagaattatgagcgattggatgaattgat 262  Q
    |||||||||| ||||||||  |||||||||| |||||    
T  4477713 aattgattga-aattatgattgattggatgatttgat 4477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 930085 - 930229
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| || ||||||||||    
T  930085 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgag 930184  T
Q  116 ggttagggtttgatgatgattctgaagggaaatgggtaataatcat 161  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||    
T  930185 ggttagggtttgatgatgtttctgaaggg-aatgggtaatgatcat 930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 29 - 278
Target Start/End: Original strand, 21565214 - 21565462
Alignment:
Q  29 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 126  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  21565214 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 21565312  T
Q  127 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 226  Q
    |||||||||||| ||||| |||||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  |||||||||||||||||    
T  21565313 gatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataa 21565411  T
Q  227 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    ||||||||| || ||| |  ||||||||||||||||||| || |||||||||    
T  21565412 attgattga-aaatataattgattggatgaattgatgaagttctgtatgatg 21565462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 12168428 - 12168212
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12168428 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 12168330  T
Q  116 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 215  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  12168329 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 12168233  T
Q  216 tgtgat-cataaattgattga 235  Q
    ||| || ||| ||||||||||    
T  12168232 tgtaatccatgaattgattga 12168212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 19287337 - 19287121
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19287337 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19287239  T
Q  116 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 215  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19287238 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19287142  T
Q  216 tgtgat-cataaattgattga 235  Q
    ||| || ||| ||||||||||    
T  19287141 tgtaatccatgaattgattga 19287121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 16 - 235
Target Start/End: Original strand, 19785859 - 19786075
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||| |||     
T  19785859 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaa 19785957  T
Q  116 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 215  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19785958 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19786054  T
Q  216 tgtgat-cataaattgattga 235  Q
    ||| || ||| ||||||||||    
T  19786055 tgtaatccatgaattgattga 19786075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 19878521 - 19878305
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19878521 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19878423  T
Q  116 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 215  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19878422 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19878326  T
Q  216 tgtgat-cataaattgattga 235  Q
    ||| || ||| ||||||||||    
T  19878325 tgtaatccatgaattgattga 19878305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 19884297 - 19884081
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 115  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19884297 ttctgcaaaactaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19884199  T
Q  116 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 215  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19884198 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19884102  T
Q  216 tgtgat-cataaattgattga 235  Q
    ||| || ||| ||||||||||    
T  19884101 tgtaatccatgaattgattga 19884081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 215
Target Start/End: Original strand, 34639986 - 34640173
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 125  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||   ||   ||||||||    
T  34639986 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataataagaaaattagggtt 34640085  T
Q  126 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 215  Q
    |||||||| |||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  34640086 tgatgatggttctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 34640173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 215
Target Start/End: Original strand, 34646660 - 34646847
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 125  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||   ||   ||||||||    
T  34646660 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataataagaaaattagggtt 34646759  T
Q  126 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 215  Q
    |||||||| |||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  34646760 tgatgatggttctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 34646847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 25469704 - 25469816
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 125  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   ||||||||    
T  25469704 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggtt 25469801  T
Q  126 tgatgatgattctga 140  Q
    ||||||| |||||||    
T  25469802 tgatgataattctga 25469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 24512820 - 24512899
Alignment:
Q  3 tgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 82  Q
    ||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  24512820 tgctgtgcaatctttctgcaaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 223
Target Start/End: Complemental strand, 9187550 - 9187352
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat--aaattgagggttaggg 123  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||| ||||| || ||||||| || ||| | ||| ||  |||||| |  ||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaaatagatctaattgaattgttcttgaatataaaaattgggaattaggg 9187451  T
Q  124 tttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 223  Q
     |||||| ||||| |||| ||||    |||| ||||||||| | | ||||||||| || ||||||||||||   ||||||||||  ||||| ||||||||    
T  9187450 -ttgatgctgattttgaaaggaatgatgtaagaatcatgtttaatgtgttgtaatttagtgttcagaatgatttcttaatctataatgttgttgtgatca 9187352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 25397228 - 25397172
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 83  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  25397228 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 19471335 - 19471391
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 83  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||||||| |||||||    
T  19471335 taaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 25348542 - 25348486
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 83  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 31252478 - 31252394
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 110  Q
    ||||||||||||||||| ||||| |  || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  31252478 ctaaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 31252394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 25598697 - 25598643
Alignment:
Q  29 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 83  Q
    ||||||||||||||||| ||||| || |||||||| |||| ||||||||||||||    
T  25598697 aggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 19 - 278
Target Start/End: Complemental strand, 1240 - 983
Alignment:
Q  19 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 118  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  1240 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 1142  T
Q  119 tagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgt 218  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  1141 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct-tgttgttgctgt 1043  T
Q  219 gatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  1042 gatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 19 - 278
Target Start/End: Complemental strand, 50241 - 49984
Alignment:
Q  19 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 118  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  50241 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 50143  T
Q  119 tagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgt 218  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  50142 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct-tgttgttgctgt 50044  T
Q  219 gatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  50043 gatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 49984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 16 - 278
Target Start/End: Original strand, 8045822 - 8046083
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  8045822 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 8045920  T
Q  116 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 215  Q
    ||||||||||||| ||  |||||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  8045921 ggttagggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgc 8046020  T
Q  216 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  8046021 tgtgatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 8046083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 16 - 281
Target Start/End: Complemental strand, 11848179 - 11847908
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa----- 110  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| || || ||         
T  11848179 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatca 11848080  T
Q  111 -ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgt 209  Q
     ||||||||||||||||||||| |||||||||| | |||||||||| ||||||||||| || || ||||||||||||||||||||||||||||||| |||    
T  11848079 attgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatctttgt 11847980  T
Q  210 tgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatgatg 281  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  11847979 tgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatgatg 11847908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 215
Target Start/End: Complemental strand, 53483760 - 53483573
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 124  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  53483760 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 53483662  T
Q  125 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 215  Q
    |||||||||||||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  53483661 ttgatgatgattctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 53483573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 15408216 - 15408139
Alignment:
Q  5 ctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 82  Q
    ||||| |||| ||||||| | |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  15408216 ctgtgcaatctttctgcagatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 216
Target Start/End: Complemental strand, 27906321 - 27906130
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggt 124  Q
    ||||| |||||||| || ||||| || || |||||||| ||||||||||||||||| |  |||| | |||||| | |||||| ||||||||  |||||||    
T  27906321 ctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaatataatagaatagttcttgaagataaaattgagaattagggt 27906222  T
Q  125 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgct 216  Q
     ||||| ||||| |||| | ||| | |||| ||||||||| | | ||||||||| | |||||| | ||||   ||||||||||  |||||||    
T  27906221 gtgatgttgattttgaaagaaaaggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatctataatgttgct 27906130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 8834951 - 8834895
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 83  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 13888697 - 13888641
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 83  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 14486713 - 14486632
Alignment:
Q  29 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 110  Q
    |||||||||||||||||||  || || |||||||| ||||||||||||||||| | | ||||| || ||| | |||||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaattaatcgaattgaattgttcttgaagataaa 14486632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 15245271 - 15245215
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 83  Q
    ||||||||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15245271 taaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  32 taagggtgagactatctctcgataatcataatctataatttctgaaaattga 83  Q
    |||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 15747551 - 15747592
Alignment:
Q  21 caaaactaaggtaagggtgagactatctctcgataatcataa 62  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  15747551 caaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 15308176 - 15308120
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 83  Q
    |||| |||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15308176 taagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 111948 - 111728
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 114  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  111948 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattga 111849  T
Q  115 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 214  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  111848 gggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctg 111749  T
Q  215 ctgtgatcataaattgattga 235  Q
    |||||||||||||||||||||    
T  111748 ctgtgatcataaattgattga 111728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 16 - 278
Target Start/End: Original strand, 740 - 1002
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattga 114  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  740 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattga 839  T
Q  115 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 214  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||| |||| || |||||||||||||||||| || |||||||||||| ||||||||    
T  840 gggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatct-tgttgttg 938  T
Q  215 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
     |||||||||||| ||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  939 atgtgatcataaactgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 1002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 27 - 278
Target Start/End: Original strand, 19661454 - 19661703
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 126  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19661454 taaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 19661553  T
Q  127 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 226  Q
    ||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||||||    
T  19661554 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcataa 19661652  T
Q  227 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    ||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  19661653 attgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 19661703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 27 - 278
Target Start/End: Complemental strand, 6483772 - 6483523
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 126  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6483673  T
Q  127 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 226  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  6483672 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6483574  T
Q  227 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    ||||||||| ||||||||  ||| |||||||||||||||  | |||||||||    
T  6483573 attgattga-aattatgattgatgggatgaattgatgaagatttgtatgatg 6483523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 27 - 278
Target Start/End: Complemental strand, 6487239 - 6486990
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 126  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6487140  T
Q  127 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 226  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  6487139 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6487041  T
Q  227 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    ||||||||| ||||||||  ||| |||||||||||||||  | |||||||||    
T  6487040 attgattga-aattatgattgatgggatgaattgatgaagatttgtatgatg 6486990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 26583892 - 26583687
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  26583892 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 26583794  T
Q  116 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 215  Q
    |||||||| |||||||||||||||| |||||| ||||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||    
T  26583793 ggttagggcttgatgatgattctgaggggaaa-gggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgc 26583695  T
Q  216 tgtgatca 223  Q
    ||||||||    
T  26583694 tgtgatca 26583687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 29 - 278
Target Start/End: Original strand, 23089057 - 23089305
Alignment:
Q  29 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 126  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  23089057 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 23089155  T
Q  127 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 226  Q
    |||||||||||| ||||| |||||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  |||||||||||||||||    
T  23089156 gatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataa 23089254  T
Q  227 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    ||||||||| || ||| |  ||||||||||||||||||| || |||||||||    
T  23089255 attgattga-aaatataattgattggatgaattgatgaagttctgtatgatg 23089305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 29 - 278
Target Start/End: Complemental strand, 23879060 - 23878813
Alignment:
Q  29 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 127  Q
    |||||||||||||||||||||||  |||| || || |||||||||  ||||||||||||||||| ||   ||| | ||| |||||||||||||||||| |    
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttg-aggattaaattgagggttagggtt-g 23878963  T
Q  128 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 227  Q
     |||||||||||| |||||  ||||||| |||||||||||| ||||||||| | ||||||||||||||| ||||||||||  ||||| ||||||||||||    
T  23878962 ttgatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgttgtgatcataaa 23878863  T
Q  228 ttgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||| || ||  |  ||||||||||||||||||| || |||||||||    
T  23878862 ttgattga-aaatagaattgattggatgaattgatgaagttttgtatgatg 23878813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 27 - 278
Target Start/End: Original strand, 23101463 - 23101713
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggt 124  Q
    |||||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||  ||   ||| | |||||| ||||||||||||||    
T  23101463 taaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttg-aggataaaattgagggttagggt 23101561  T
Q  125 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 224  Q
    |||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  ||||| |||||||||    
T  23101562 ttgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgttgtgatcat 23101660  T
Q  225 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    ||||||||||| || ||| |  ||||||||||||| ||||| || |||||||||    
T  23101661 aaattgattga-aaatataattgattggatgaattcatgaagttctgtatgatg 23101713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 280
Target Start/End: Original strand, 5706023 - 5706274
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 124  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  5706023 ctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 5706121  T
Q  125 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat-ca 223  Q
    |||||||||||||||| ||  |||| ||||  || |||||| || | |   ||| ||||||| ||||||||| ||| ||| |||||||||||   || ||    
T  5706122 ttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tctctgaatttaatgttaagaatgaaagcttgatccatgttgttgctacaatcca 5706218  T
Q  224 taaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatgat 280  Q
    | |||||||||| |||| |||   |||| |||||||||||||| |||| ||||||||    
T  5706219 ttaattgattga-aattttgatgaattgtatgaattgatgaatatgtggatgatgat 5706274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 23265197 - 23265133
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 91  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 23280265 - 23280201
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 91  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 21908414 - 21908353
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 88  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6260146 - 6260186
Alignment:
Q  1 tgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6260146 tgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 6260186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 24661632 - 24661576
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 83  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  24661632 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 19665048 - 19665081
Alignment:
Q  1 tgtgctgtgtaatcattctgcaaaactaaggtaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  19665048 tgtgctgtgtaatcattctgcaaaactaaggtaa 19665081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 10632 - 10577
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  10632 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 207
Target Start/End: Original strand, 23168288 - 23168483
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat----aaa 110  Q
    ||||||||  |||||||||||||| || ||||| ||  | |||||||| ||||||||||| |||||| | ||||| | |||||||| ||||||    |||    
T  23168288 ttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaaattaatctaatagaatagtttt-gaagataaaaaaa 23168386  T
Q  111 ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctat 207  Q
    |||||  ||||||| ||||| ||||| |||| | ||| | |||| | ||||||| | | ||||||||| | |||||||| ||||   ||||||||||    
T  23168387 ttgagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctat 23168483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 207
Target Start/End: Original strand, 23579545 - 23579740
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat----aaa 110  Q
    ||||||||  |||||||||||||| || ||||| ||  | |||||||| ||||||||||| |||||| | ||||| | |||||||| ||||||    |||    
T  23579545 ttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaaattaatctaatagaatagtttt-gaagataaaaaaa 23579643  T
Q  111 ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctat 207  Q
    |||||  ||||||| ||||| ||||| |||| | ||| | |||| | ||||||| | | ||||||||| | |||||||| ||||   ||||||||||    
T  23579644 ttgagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctat 23579740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 25180929 - 25180984
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  25180929 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 26885246 - 26885166
Alignment:
Q  17 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 98  Q
    |||||||  |||||||||||||| || ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  26885246 tctgcaattctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 26885166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 29 - 266
Target Start/End: Original strand, 14398 - 14635
Alignment:
Q  29 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 127  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 14497  T
Q  128 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 227  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||||||    
T  14498 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcataaa 14597  T
Q  228 ttgattgagaattatgagcgattggatgaattgatgaat 266  Q
     ||||||| || |||||  |||||||| |||||||||||    
T  14598 ctgattga-aaatatgattgattggataaattgatgaat 14635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 179; Significance: 1e-96; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 29 - 278
Target Start/End: Original strand, 8727735 - 8727984
Alignment:
Q  29 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 127  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 8727834  T
Q  128 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 227  Q
    | ||||||||||| ||| | |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  8727835 acgatgattctgaggggta-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaa 8727933  T
Q  228 ttgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  8727934 ttgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 8727984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 16 - 278
Target Start/End: Complemental strand, 23866680 - 23866418
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  23866680 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 23866582  T
Q  116 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 214  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  23866581 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 23866483  T
Q  215 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    || ||||| |||| |||||  ||| ||||||| ||||||||||||||||||||||||||||||||    
T  23866482 ctctgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatg 23866418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 26 - 278
Target Start/End: Complemental strand, 44477678 - 44477428
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 125  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44477678 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44477579  T
Q  126 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 225  Q
    ||||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  44477578 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44477480  T
Q  226 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  44477479 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 44477428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 26 - 278
Target Start/End: Complemental strand, 44492836 - 44492586
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 125  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44492836 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44492737  T
Q  126 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 225  Q
    ||||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  44492736 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44492638  T
Q  226 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  44492637 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 44492586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 27940826 - 27941104
Alignment:
Q  1 tgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt-t 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    | | | || ||| |    
T  27940826 tgtgctgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattgtttgattagaattgttct 27940925  T
Q  100 tggaagataa--attgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaa 197  Q
    || || ||||  |||| |  ||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||    
T  27940926 tgaaaaataagaattgggaattagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaa 27941024  T
Q  198 cttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
     |||||||||  ||||| | |||||||||||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  27941025 tttaatctatactgttgttatgatcataaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 27941104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 17054656 - 17054440
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 115  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||     
T  17054656 ttctgcaaaaccaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaa 17054558  T
Q  116 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 215  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  17054557 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 17054461  T
Q  216 tgtgat-cataaattgattga 235  Q
    ||| || ||| ||||||||||    
T  17054460 tgtaatccatgaattgattga 17054440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 18614327 - 18614217
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 125  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| | ||||| || ||| | |||||| ||||||||  ||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttcttgaagataaaattgagaattagggtt 18614228  T
Q  126 tgatgatgatt 136  Q
    | ||| |||||    
T  18614227 ttatgctgatt 18614217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 23482053 - 23482117
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 91  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 14056543 - 14056619
Alignment:
Q  6 tgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 82  Q
    |||| |||| ||||||||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  14056543 tgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 25112052 - 25111976
Alignment:
Q  6 tgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 82  Q
    |||| |||| |||| |||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  25112052 tgtgcaatctttctacaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 39364975 - 39364919
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 83  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 29643386 - 29643440
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    |||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 24320670 - 24320725
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  24320670 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30765884 - 30765925
Alignment:
Q  1 tgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 42  Q
    |||||||| | ||| |||||||||||||||||||||||||||    
T  30765884 tgtgctgttttatctttctgcaaaactaaggtaagggtgaga 30765925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 21931752 - 21931696
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 83  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  21931752 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 173; Significance: 5e-93; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 27 - 278
Target Start/End: Original strand, 20437024 - 20437274
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 125  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 20437123  T
Q  126 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 225  Q
    |||||||||||||| |||| |||||||| | |||||||||||| ||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  20437124 tgatgatgattctg-aggggaatgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata 20437222  T
Q  226 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  20437223 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 20437274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 41112100 - 41111884
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| || ||||  |||     
T  41112100 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaa 41112002  T
Q  116 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 215  Q
     |||||||||||||||||||||||| ||  |||| ||||  |   ||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  41112001 agttagggtttgatgatgattctgatgg--aatgagtaaagacggtgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 41111905  T
Q  216 tgtgat-cataaattgattga 235  Q
    ||| || ||| ||||||||||    
T  41111904 tgtaatccatgaattgattga 41111884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 32651627 - 32651563
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 91  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 19663517 - 19663572
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 82  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 18712854 - 18712790
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 91  Q
    ||||||| ||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 20805376 - 20805320
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 83  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 11158148 - 11158093
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 82  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 10811785 - 10811839
Alignment:
Q  29 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 83  Q
    ||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  10811785 aggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 20851132 - 20851187
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20851132 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 20857759 - 20857814
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20857759 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 21706331 - 21706276
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21706331 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 21710873 - 21710818
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21710873 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 3 - 278
Target Start/End: Complemental strand, 11420 - 11146
Alignment:
Q  3 tgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg 102  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11420 tgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttgg 11321  T
Q  103 aagata-aattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaactta 201  Q
    || ||| ||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||||||| | ||||||| ||||||| ||||    
T  11320 aaaatagaattgagggttagggtttgatgatgattctggaggg-aatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatctta 11222  T
Q  202 atctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    ||| ||  |||||||||||||| ||||||||||| || ||| |  ||||||||||||||||||| || |||||||||    
T  11221 atccatactgttgctgtgatcacaaattgattga-aaatataattgattggatgaattgatgaagttttgtatgatg 11146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 166; Significance: 7e-89; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 26 - 278
Target Start/End: Original strand, 10195 - 10446
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 124  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  10195 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 10294  T
Q  125 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 224  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  10295 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 10393  T
Q  225 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  10394 aaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 10446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 166; Significance: 7e-89; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 26 - 278
Target Start/End: Original strand, 1525 - 1776
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 124  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  1525 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 1624  T
Q  125 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 224  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  1625 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 1723  T
Q  225 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  1724 aaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 1776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 161; Significance: 7e-86; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 16 - 278
Target Start/End: Original strand, 1887 - 2148
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 114  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  1887 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 1986  T
Q  115 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 214  Q
    |||||||||||||||||||||| ||| ||  |||||||||| || ||||||||||| ||||||| ||||||||| |||||||||||||||  ||||||||    
T  1987 gggttagggtttgatgatgattttgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatccttgttgttg 2084  T
Q  215 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||||||| |||||||| | | ||||| ||||| ||||||||||||||||||||| ||||    
T  2085 ctgtgatcataacttgattgaaattgatgagtgattgtatgaattgatgaatttgtgtacgatg 2148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 16 - 278
Target Start/End: Original strand, 8564 - 8825
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 114  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  8564 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 8663  T
Q  115 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 214  Q
    |||||||||||||||||||||| ||| ||  |||||||||| || ||||||||||| ||||||| ||||||||| |||||||||||||||  ||||||||    
T  8664 gggttagggtttgatgatgattatgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatccttgttgttg 8761  T
Q  215 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||||||| |||||||| | | || || ||||| ||||||||||||||||||||| ||||    
T  8762 ctgtgatcataacttgattgaaattgataagtgattgtatgaattgatgaatttgtgtacgatg 8825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 18250 - 17973
Alignment:
Q  1 tgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttt 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| |||    
T  18250 tgtgttgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagcttt 18151  T
Q  100 tggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctg-ttgtaatataatgttcagaatgaaaac 198  Q
     |||| ||||||||||||||| ||||| ||||||||||| | ||||||| ||||||  |||||||||||||| ||||||| | |||| ||||||||||||    
T  18150 aggaaaataaattgagggttaaggtttaatgatgattctaacgggaaat-ggtaatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaac 18052  T
Q  199 ttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||| ||||||||||||||||||||| |||||||||| ||||  ||  |||||||| ||||||||||| | |||||||||    
T  18051 ttaacctatgttgttgctgtgatcatgaattgattga-aatttggattgattggataaattgatgaatatttgtatgatg 17973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 151; Significance: 6e-80; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 16 - 266
Target Start/End: Complemental strand, 356 - 109
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 115  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  356 ttctgcaaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 258  T
Q  116 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 215  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||||| | ||||| |||  |||||||| |||| |||||||||||||| |||     
T  257 ggttagggtttgatgatgattctg-aggggaatgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctatgttattga 159  T
Q  216 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 266  Q
    ||||||||||||||| |||| ||||||||  | |||||| |||||||||||    
T  158 tgtgatcataaattggttga-aattatgattggttggataaattgatgaat 109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 3 - 223
Target Start/End: Complemental strand, 30936 - 30715
Alignment:
Q  3 tgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg 102  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30936 tgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttgg 30837  T
Q  103 aagat-aaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaactta 201  Q
    ||| | ||||||||| ||||||||||||||||||| ||| |||||  | ||||  |||||||||| | ||||||||  | |||| |||||||||  | ||    
T  30836 aaggtaaaattgaggattagggtttgatgatgattttgaggggaatggtgtaacgatcatgttaaatatgttgtaaagtgatgtgcagaatgaattccta 30737  T
Q  202 atctatgttgttgctgtgatca 223  Q
    ||||||  ||||| ||||||||    
T  30736 atctataatgttgatgtgatca 30715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 29 - 278
Target Start/End: Original strand, 3295 - 3544
Alignment:
Q  29 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 126  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||||  |||||| ||||||||||||||||    
T  3295 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggg-gataaaattgagggttagggttt 3393  T
Q  127 gatgatgattctgaagggaaatgggtaat-aatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 225  Q
    |||||||||||||| ||||| |||||||| ||||||||||||| ||||||||| | ||||||||||||||| ||||||||||  |||||||||||||| |    
T  3394 gatgatgattctgaggggaa-tgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgctgtgatcaca 3492  T
Q  226 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||||| || ||| |  ||||||||||||||||||| || |||||||||    
T  3493 aattgattga-aaatataattgattggatgaattgatgaagttttgtatgatg 3544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 29 - 278
Target Start/End: Original strand, 3624 - 3872
Alignment:
Q  29 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 126  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  3624 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 3722  T
Q  127 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 226  Q
    |||||||||||||| ||| | |||||||| |||||||||||| ||||||||| | |||||| |||||||| ||||||||||  ||||| |||||||||||    
T  3723 gatgatgattctgaggggga-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatactgttgttgtgatcataa 3821  T
Q  227 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    ||||||||| || ||| |  ||||||||||||||||||| || |||||||||    
T  3822 attgattga-aaatataattgattggatgaattgatgaagttttgtatgatg 3872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 21 - 217
Target Start/End: Original strand, 1727 - 1920
Alignment:
Q  21 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 120  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  1727 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 1825  T
Q  121 gggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 217  Q
    |||||||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||| ||||||||    
T  1826 gggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttgctg 1920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 21 - 217
Target Start/End: Original strand, 5750 - 5943
Alignment:
Q  21 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 120  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  5750 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 5848  T
Q  121 gggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 217  Q
    |||||||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||| ||||||||    
T  5849 gggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttgctg 5943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 991 - 904
Alignment:
Q  22 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 109  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  991 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 8136 - 8049
Alignment:
Q  22 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 109  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  8136 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 901 - 806
Alignment:
Q  170 tgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 266  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  901 tgttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 8046 - 7951
Alignment:
Q  170 tgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 266  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  8046 tgttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 7951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 186 - 278
Target Start/End: Complemental strand, 3558 - 3466
Alignment:
Q  186 tcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 278  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaatttatgggtgattggatgaattgatgaatttgtgtatgatg 3466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 45268 - 45386
Alignment:
Q  20 gcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggt 118  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |    
T  45268 gcaaatctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaat 45366  T
Q  119 tagggtttgatgatgattct 138  Q
    ||||||||||||||||||||    
T  45367 tagggtttgatgatgattct 45386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 40508 - 40587
Alignment:
Q  3 tgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 82  Q
    ||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  40508 tgctgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 17723 - 17643
Alignment:
Q  3 tgctgtgtaatcattctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 82  Q
    ||||||| |||| |||||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  17723 tgctgtgcaatctttctgcaaaatctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 135552 - 135473
Alignment:
Q  3 tgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 82  Q
    ||||||| |||| ||||| ||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  135552 tgctgtgcaatctttctgaaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 16875 - 16811
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 91  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 116951 - 116887
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 91  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 34276 - 34331
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 82  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 22569 - 22646
Alignment:
Q  3 tgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaat 80  Q
    ||||||| |||  ||||||||| | |||||||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  22569 tgctgtgcaatatttctgcaaatccaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 8 - 72
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 91  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 13687 - 13623
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 91  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 101928 - 101992
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 91  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||| ||||||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 1515 - 1453
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa 78  Q
    |||||||||| ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||    
T  1515 ttctgcaaaattaaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 23559 - 23760
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaaga-taaattga 114  Q
    ||||||||  |||||||||||||| || ||||| |  || |||||||| ||||||||||||||||| | ||||  | |||||| | |||||  |||||||    
T  23559 ttctgcaattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaattaatctaaaagaatagttcttgaagacaaaattga 23658  T
Q  115 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 214  Q
    |  ||||||| ||||| ||||| |||| | |||   |||| ||||||||| | | ||||||||| | |||||||| ||||   ||||||||||  |||||    
T  23659 gaattagggtgtgatgctgattttgaaagaaaagatgtaagaatcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctataatgttg 23758  T
Q  215 ct 216  Q
    ||    
T  23759 ct 23760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 780 - 680
Alignment:
Q  16 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagataaattga 114  Q
    |||||||||||||||||||||||| || ||||| || || ||| |||| ||||||||||| |||||| ||||||  | |||||| | ||| |||||||||    
T  780 ttctgcaaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattga 681  T
Q  115 g 115  Q
    |    
T  680 g 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 5857 - 5941
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 110  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  5857 ctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 5941  T

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Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 1441 - 1321
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 125  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||  || ||| | || ||| ||| ||||  ||||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt 1342  T
Q  126 tgatgatgattctgaagggaa 146  Q
    ||||| ||||| |||| ||||    
T  1341 tgatgctgattttgaaaggaa 1321  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 12352 - 12296
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 83  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

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Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 14997 - 15052
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 82  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

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Target: scaffold0790 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 5520 - 5487
Alignment:
Q  15 attctgcaaaactaaggtaagggtgagactatct 48  Q
    ||||||||||||||||||||||||||||||||||    
T  5520 attctgcaaaactaaggtaagggtgagactatct 5487  T

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Target: scaffold0249 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 2223 - 2256
Alignment:
Q  1 tgtgctgtgtaatcattctgcaaaactaaggtaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  2223 tgtgctgtgtaatcattctgcaaaactaaggtaa 2256  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 493019 - 493099
Alignment:
Q  17 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 98  Q
    |||||||  ||||||||||||||||| ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  493019 tctgcaattctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 493099  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 39503 - 39563
Alignment:
Q  23 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 83  Q
    |||| |||||||||||||| ||| ||||| || |||||||| ||||||||| |||||||||    
T  39503 aaacaaaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 216
Target Start/End: Complemental strand, 73337 - 73149
Alignment:
Q  29 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 127  Q
    ||||||||||| || ||||| || || |||||||| |||||||| |||||||| | ||||| | |||| | | |||||| ||||||||  ||||||| ||    
T  73337 aggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatctaataggatagctcttgaagataaaattgagaattagggtgtg 73238  T
Q  128 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgct 216  Q
    ||| ||||| |||| | ||  | |||| ||||||||| | | ||||||||| | |||||| | ||||   ||||||||||  |||||||    
T  73237 atgttgattttgaaagaaacggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatctataatgttgct 73149  T

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Target: scaffold0348 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 9391 - 9336
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  9391 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 10294 - 10239
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  10294 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 135493 - 135438
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    |||||||||| |||||| ||||| || ||| ||||||| |||||||||||||||||    
T  135493 ctaaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

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Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 1913 - 1967
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 81  Q
    ||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  1913 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

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Target: scaffold0453 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 10550 - 10634
Alignment:
Q  26 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 110  Q
    |||||||||| ||| || ||||| || || ||| |||| ||||||||||||||||| | ||||| | |||||| | |||||||||    
T  10550 ctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatctaatagaatagttcttgaagataaa 10634  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 2628 - 2684
Alignment:
Q  27 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 83  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  2628 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

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