View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14221_low_2 (Length: 521)

Name: NF14221_low_2
Description: NF14221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14221_low_2
NF14221_low_2
[»] chr3 (10 HSPs)
chr3 (18-506)||(48414001-48414489)
chr3 (19-57)||(31604712-31604750)
chr3 (19-57)||(39624011-39624049)
chr3 (19-57)||(41665449-41665487)
chr3 (19-57)||(48394401-48394439)
chr3 (19-57)||(52044116-52044154)
chr3 (125-164)||(48402569-48402608)
chr3 (19-57)||(27481726-27481764)
chr3 (19-57)||(39918642-39918680)
chr3 (133-162)||(48394944-48394973)
[»] chr8 (6 HSPs)
chr8 (19-57)||(9944041-9944079)
chr8 (19-57)||(18364548-18364586)
chr8 (19-57)||(27547189-27547227)
chr8 (19-57)||(35929261-35929299)
chr8 (19-57)||(43731602-43731640)
chr8 (19-57)||(43748348-43748386)
[»] chr7 (7 HSPs)
chr7 (19-57)||(23260691-23260729)
chr7 (19-57)||(28040472-28040510)
chr7 (19-57)||(31516576-31516614)
chr7 (19-57)||(33171139-33171177)
chr7 (19-57)||(38538925-38538963)
chr7 (19-57)||(39796770-39796808)
chr7 (19-57)||(44206113-44206151)
[»] chr5 (3 HSPs)
chr5 (19-57)||(8880759-8880797)
chr5 (19-57)||(32684999-32685037)
chr5 (19-57)||(20190364-20190402)
[»] chr2 (4 HSPs)
chr2 (19-57)||(27282681-27282719)
chr2 (19-57)||(36047064-36047102)
chr2 (19-57)||(36048295-36048333)
chr2 (22-57)||(44206835-44206870)
[»] chr1 (8 HSPs)
chr1 (19-57)||(3820324-3820362)
chr1 (19-57)||(5031753-5031791)
chr1 (19-57)||(5757814-5757852)
chr1 (19-57)||(17983275-17983313)
chr1 (19-57)||(20607565-20607603)
chr1 (19-57)||(20610836-20610874)
chr1 (19-57)||(41985266-41985304)
chr1 (19-57)||(6073260-6073298)
[»] chr6 (1 HSPs)
chr6 (23-55)||(30899737-30899769)


Alignment Details
Target: chr3 (Bit Score: 457; Significance: 0; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 457; E-Value: 0
Query Start/End: Original strand, 18 - 506
Target Start/End: Original strand, 48414001 - 48414489
Alignment:
Q  18 aaacccgggtcacccgcgtgacaagcgggaatacttaccatgcaatgtcacaatgtcttcaacattttaatataatttcgaatcattacttcatgttata 117  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48414001 aaacccgagtcacccgcgtgacaagcgggaatacttaccatgcaatgtcacaatgtcttcaacattttaatataatttcgaatcattacttcatgttata 48414100  T
Q  118 tgtgaatttgcattaaattgatgaagatatggtttagaatgcagcaatcacatacgcatatcattgaattgatttgtttatataaatatgctatcatttg 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  48414101 tgtgaatttgcattaaattgatgaagatatggtttagaatgcagcaatcacatacgcagatcattgaattgatttgtttatataaatatgctatcatttg 48414200  T
Q  218 atatataaaatcaaatctataactaactaatcaaagaatgtatgtagttgagatttaaagaaacagttacatataacaacgacattttagattaaaggcg 317  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48414201 atatataaaatcaaatctataactaattaatcaaagaatgtatgtagttgagatttaaagaaacagttacatataacagcgacattttagattaaaggcg 48414300  T
Q  318 tgtctcagcttgtagaacacttaaaaacaaaatgttaggttcaacttttaaccaattgaatagactacatacatttactcaatttggatattcaaaaaca 417  Q
    ||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  48414301 tgtccgagtttgtagaacacttaaaaacaaaatgttaggttcaacttttaaccaattgaatagactacatacatttattcaatttggatattcaaaaaca 48414400  T
Q  418 agttcagttcagactcttcagagggataatgatcttacaacttatctgttgcttcccttatctactccagtcaatattggtttcctttg 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48414401 agttcagttcagactcttcagagggataatgatcttacaacttatctgttgcttcccttatctactccagtcaatattggtttcctttg 48414489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 31604750 - 31604712
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  31604750 aacccgggtcacccgcgtgacaggcgggaatacttacca 31604712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 39624011 - 39624049
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  39624011 aacccgggtcacccgcgtgacaggcgggaatacttacca 39624049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 41665449 - 41665487
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  41665449 aacccgggtcacccgcgtgacaggcgggaatacttacca 41665487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 48394401 - 48394439
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  48394401 aacccgggtcacccgcgtgacaggcgggaatacttacca 48394439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 52044154 - 52044116
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  52044154 aacccgggtcacccgcgtgacaggcgggaatacttacca 52044116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 164
Target Start/End: Original strand, 48402569 - 48402608
Alignment:
Q  125 ttgcattaaattgatgaagatatggtttagaatgcagcaa 164  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  48402569 ttgcattagattgatgaagatatagtttagaatgcagcaa 48402608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 27481726 - 27481764
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  27481726 aacccggatcacccgcgtgacaggcgggaatacttacca 27481764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 39918642 - 39918680
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  39918642 aacccgggtcacccgtgtgacaggcgggaatacttacca 39918680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 48394944 - 48394973
Alignment:
Q  133 aattgatgaagatatggtttagaatgcagc 162  Q
    ||||||||||||||||||||||||||||||    
T  48394944 aattgatgaagatatggtttagaatgcagc 48394973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 9944041 - 9944079
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  9944041 aacccgggtcacccgcgtgacaggcgggaatacttacca 9944079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 18364586 - 18364548
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  18364586 aacccgggtcacccgcgtgacaggcgggaatacttacca 18364548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 27547227 - 27547189
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  27547227 aacccgggtcacccgcgtgacaggcgggaatacttacca 27547189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 35929299 - 35929261
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  35929299 aacccgggtcacccgcgtgacaggcgggaatacttacca 35929261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 43731602 - 43731640
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  43731602 aacccgggtcacccgcgtgacaggcgggaatacttacca 43731640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 43748348 - 43748386
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  43748348 aacccgggtcacccgcgtgacaggcgggaatacttacca 43748386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 23260729 - 23260691
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  23260729 aacccgggtcacccgcgtgacaggcgggaatacttacca 23260691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 28040472 - 28040510
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  28040472 aacccgggtcacccgcgtgacaggcgggaatacttacca 28040510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 31516614 - 31516576
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  31516614 aacccgggtcacccgcgtgacaggcgggaatacttacca 31516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 33171177 - 33171139
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  33171177 aacccgggtcacccgcgtgacaggcgggaatacttacca 33171139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 38538963 - 38538925
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  38538963 aacccgggtcacccgcgtgacaggcgggaatacttacca 38538925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 39796770 - 39796808
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  39796770 aacccgggtcacccgcgtgacaggcgggaatacttacca 39796808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 44206151 - 44206113
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  44206151 aacccgggtcacccgcgtgacaggcgggaatacttacca 44206113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 8880797 - 8880759
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  8880797 aacccgggtcacccgcgtgacaggcgggaatacttacca 8880759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 32685037 - 32684999
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  32685037 aacccgggtcacccgcgtgacaggcgggaatacttacca 32684999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 20190364 - 20190402
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  20190364 aacccgggtcacccacgtgacaggcgggaatacttacca 20190402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 27282681 - 27282719
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  27282681 aacccgggtcacccgcgtgacaggcgggaatacttacca 27282719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 36047102 - 36047064
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  36047102 aacccgggtcacccgcgtgacaggcgggaatacttacca 36047064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 36048333 - 36048295
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  36048333 aacccgggtcacccgcgtgacaggcgggaatacttacca 36048295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 44206870 - 44206835
Alignment:
Q  22 ccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    ||||||||||||||||||| ||||||||||||||||    
T  44206870 ccgggtcacccgcgtgacaggcgggaatacttacca 44206835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000002; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 3820324 - 3820362
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  3820324 aacccgggtcacccgcgtgacaggcgggaatacttacca 3820362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 5031791 - 5031753
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  5031791 aacccgggtcacccgcgtgacaggcgggaatacttacca 5031753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 5757852 - 5757814
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  5757852 aacccgggtcacccgcgtgacaggcgggaatacttacca 5757814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 17983313 - 17983275
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  17983313 aacccgggtcacccgcgtgacaggcgggaatacttacca 17983275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 20607603 - 20607565
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  20607603 aacccgggtcacccgcgtgacaggcgggaatacttacca 20607565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 20610874 - 20610836
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  20610874 aacccgggtcacccgggtgacaagcgggaatacttacca 20610836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 41985304 - 41985266
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  41985304 aacccgggtcacccgcgtgacaggcgggaatacttacca 41985266  T

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Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 6073260 - 6073298
Alignment:
Q  19 aacccgggtcacccgcgtgacaagcgggaatacttacca 57  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  6073260 aacccgggtcacccgcgtgacaggtgggaatacttacca 6073298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 30899769 - 30899737
Alignment:
Q  23 cgggtcacccgcgtgacaagcgggaatacttac 55  Q
    |||||||||||||||||| ||||||||||||||    
T  30899769 cgggtcacccgcgtgacaggcgggaatacttac 30899737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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