View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14223_high_16 (Length: 243)

Name: NF14223_high_16
Description: NF14223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14223_high_16
NF14223_high_16
[»] chr8 (70 HSPs)
chr8 (72-227)||(20094713-20094868)
chr8 (109-227)||(24532376-24532495)
chr8 (73-227)||(41790669-41790823)
chr8 (116-227)||(11232391-11232503)
chr8 (122-227)||(11232162-11232268)
chr8 (75-227)||(20301271-20301424)
chr8 (75-227)||(21087903-21088056)
chr8 (72-227)||(39052847-39053003)
chr8 (142-227)||(4828078-4828164)
chr8 (72-227)||(37001236-37001395)
chr8 (14-73)||(20094583-20094642)
chr8 (70-227)||(5932100-5932258)
chr8 (142-227)||(17469828-17469914)
chr8 (142-227)||(19256808-19256894)
chr8 (154-227)||(37001474-37001548)
chr8 (72-228)||(8084136-8084293)
chr8 (155-227)||(19256587-19256660)
chr8 (155-227)||(24075307-24075380)
chr8 (154-227)||(35682781-35682855)
chr8 (142-218)||(10884084-10884160)
chr8 (155-227)||(17477075-17477148)
chr8 (154-226)||(27204975-27205048)
chr8 (154-226)||(27205073-27205146)
chr8 (154-226)||(27205171-27205244)
chr8 (154-218)||(39960211-39960276)
chr8 (156-227)||(4828303-4828375)
chr8 (109-227)||(8466678-8466798)
chr8 (154-213)||(42846605-42846665)
chr8 (72-218)||(3157477-3157624)
chr8 (154-228)||(12547108-12547182)
chr8 (142-227)||(12317056-12317142)
chr8 (155-227)||(7267466-7267539)
chr8 (147-227)||(38475757-38475838)
chr8 (155-227)||(39743539-39743612)
chr8 (72-227)||(7669429-7669585)
chr8 (152-219)||(8929035-8929103)
chr8 (72-227)||(12688082-12688238)
chr8 (72-207)||(31197645-31197780)
chr8 (76-219)||(37868505-37868649)
chr8 (143-220)||(5590357-5590435)
chr8 (154-227)||(5931949-5932023)
chr8 (154-227)||(15042670-15042744)
chr8 (154-227)||(22638179-22638253)
chr8 (156-225)||(26800514-26800584)
chr8 (155-200)||(34653187-34653233)
chr8 (142-227)||(34842688-34842774)
chr8 (155-207)||(4963384-4963437)
chr8 (118-213)||(8716138-8716235)
chr8 (143-227)||(42049676-42049761)
chr8 (142-213)||(422441-422513)
chr8 (109-169)||(8860798-8860858)
chr8 (94-212)||(10614879-10614998)
chr8 (78-227)||(26208172-26208323)
chr8 (169-227)||(38447442-38447501)
chr8 (142-200)||(38476075-38476134)
chr8 (165-215)||(45122367-45122418)
chr8 (154-227)||(10450010-10450084)
chr8 (35-73)||(11232238-11232276)
chr8 (35-73)||(11232473-11232511)
chr8 (35-73)||(12688309-12688347)
chr8 (76-213)||(16050053-16050191)
chr8 (154-227)||(18939297-18939371)
chr8 (154-227)||(25325656-25325730)
chr8 (154-214)||(10454449-10454510)
chr8 (40-73)||(15042935-15042968)
chr8 (72-157)||(18004247-18004332)
chr8 (119-227)||(27439512-27439621)
chr8 (124-228)||(36917409-36917514)
chr8 (109-177)||(5676011-5676079)
chr8 (155-210)||(26208013-26208069)
[»] chr7 (67 HSPs)
chr7 (72-227)||(25620146-25620302)
chr7 (72-227)||(29469615-29469771)
chr7 (72-219)||(4886347-4886495)
chr7 (72-227)||(21861304-21861460)
chr7 (75-216)||(44874499-44874641)
chr7 (72-220)||(1596611-1596759)
chr7 (72-188)||(33834240-33834357)
chr7 (72-227)||(31485577-31485733)
chr7 (72-227)||(36277144-36277300)
chr7 (72-228)||(48661473-48661630)
chr7 (76-227)||(34027403-34027555)
chr7 (154-228)||(31892396-31892471)
chr7 (142-228)||(33996299-33996386)
chr7 (142-207)||(40121912-40121978)
chr7 (155-227)||(29469850-29469923)
chr7 (142-213)||(6782885-6782957)
chr7 (155-227)||(10882007-10882079)
chr7 (125-227)||(3038055-3038158)
chr7 (141-227)||(48243424-48243511)
chr7 (104-213)||(4506956-4507066)
chr7 (154-227)||(21054953-21055027)
chr7 (154-227)||(21861539-21861613)
chr7 (154-227)||(48243061-48243135)
chr7 (154-226)||(1000560-1000633)
chr7 (136-200)||(31257249-31257314)
chr7 (144-227)||(2544437-2544521)
chr7 (136-227)||(26562055-26562147)
chr7 (154-227)||(1596838-1596912)
chr7 (142-227)||(17202189-17202275)
chr7 (142-227)||(26239904-26239990)
chr7 (154-227)||(34027637-34027711)
chr7 (154-227)||(47710453-47710527)
chr7 (154-227)||(47722109-47722183)
chr7 (159-227)||(2544220-2544289)
chr7 (72-227)||(3519957-3520114)
chr7 (116-212)||(10903110-10903207)
chr7 (142-188)||(10882227-10882274)
chr7 (142-220)||(21821823-21821902)
chr7 (35-73)||(21861296-21861334)
chr7 (72-228)||(31892160-31892318)
chr7 (154-227)||(43688160-43688233)
chr7 (109-170)||(2404363-2404424)
chr7 (104-200)||(5871905-5872002)
chr7 (159-227)||(11211684-11211752)
chr7 (108-200)||(28080701-28080794)
chr7 (155-227)||(36206064-36206137)
chr7 (156-227)||(3392992-3393064)
chr7 (94-177)||(5871751-5871835)
chr7 (154-227)||(4268064-4268139)
chr7 (153-227)||(32278884-32278959)
chr7 (154-220)||(32474517-32474584)
chr7 (104-171)||(36993258-36993325)
chr7 (147-220)||(1793763-1793837)
chr7 (154-227)||(6634865-6634939)
chr7 (35-73)||(21861531-21861569)
chr7 (75-177)||(22574662-22574764)
chr7 (35-73)||(29469607-29469645)
chr7 (35-73)||(29469842-29469880)
chr7 (154-227)||(36276991-36277065)
chr7 (154-207)||(36993074-36993128)
chr7 (142-227)||(40746275-40746361)
chr7 (154-227)||(43085537-43085611)
chr7 (178-227)||(2937977-2938026)
chr7 (155-227)||(31257032-31257105)
chr7 (146-207)||(32292549-32292610)
chr7 (154-218)||(32879614-32879679)
chr7 (40-73)||(43688208-43688241)
[»] chr6 (50 HSPs)
chr6 (72-227)||(13353211-13353367)
chr6 (72-227)||(33796336-33796492)
chr6 (76-227)||(33494549-33494701)
chr6 (72-227)||(6542861-6543017)
chr6 (72-227)||(12330097-12330253)
chr6 (142-227)||(4868801-4868887)
chr6 (142-227)||(8026399-8026485)
chr6 (142-227)||(9705030-9705116)
chr6 (154-227)||(4868577-4868651)
chr6 (142-227)||(19712724-19712812)
chr6 (142-227)||(30256823-30256908)
chr6 (154-220)||(6623410-6623477)
chr6 (154-227)||(9705264-9705338)
chr6 (154-227)||(11721915-11721989)
chr6 (123-228)||(24554126-24554232)
chr6 (142-219)||(30256596-30256674)
chr6 (155-219)||(8026622-8026687)
chr6 (109-227)||(8001504-8001624)
chr6 (155-217)||(8566960-8567023)
chr6 (145-227)||(21690732-21690815)
chr6 (70-177)||(32290789-32290896)
chr6 (154-227)||(25065094-25065168)
chr6 (142-227)||(27653227-27653313)
chr6 (155-227)||(27656468-27656541)
chr6 (155-227)||(27772724-27772797)
chr6 (154-228)||(17147660-17147735)
chr6 (71-169)||(3921627-3921724)
chr6 (142-227)||(5572604-5572689)
chr6 (154-227)||(19639113-19639187)
chr6 (154-227)||(19712962-19713036)
chr6 (155-227)||(12330292-12330364)
chr6 (143-207)||(15082133-15082198)
chr6 (141-213)||(20373595-20373667)
chr6 (156-207)||(5572386-5572438)
chr6 (154-218)||(7915870-7915933)
chr6 (169-228)||(28867972-28868032)
chr6 (72-227)||(33631723-33631878)
chr6 (70-188)||(3680061-3680180)
chr6 (154-216)||(5648672-5648735)
chr6 (154-228)||(6054412-6054487)
chr6 (35-73)||(13353203-13353241)
chr6 (154-227)||(13740926-13741000)
chr6 (154-227)||(13746426-13746500)
chr6 (35-73)||(31961180-31961218)
chr6 (35-73)||(33796328-33796366)
chr6 (159-227)||(12329949-12330018)
chr6 (45-73)||(4906808-4906836)
chr6 (154-213)||(6542709-6542769)
chr6 (35-71)||(7638634-7638670)
chr6 (155-218)||(12885076-12885140)
[»] chr5 (56 HSPs)
chr5 (72-212)||(18333617-18333758)
chr5 (73-227)||(15480332-15480487)
chr5 (72-227)||(41666910-41667067)
chr5 (109-227)||(9368605-9368724)
chr5 (109-227)||(24531609-24531728)
chr5 (118-227)||(2063698-2063807)
chr5 (142-227)||(24528550-24528636)
chr5 (72-220)||(25258219-25258368)
chr5 (72-220)||(25322009-25322158)
chr5 (72-228)||(24346654-24346812)
chr5 (154-227)||(41666757-41666831)
chr5 (72-177)||(95419-95524)
chr5 (72-227)||(6413575-6413731)
chr5 (154-220)||(25258094-25258161)
chr5 (154-220)||(25321884-25321951)
chr5 (142-227)||(8098328-8098413)
chr5 (73-186)||(17150387-17150501)
chr5 (154-227)||(19705913-19705987)
chr5 (142-227)||(21209909-21209995)
chr5 (142-218)||(8081101-8081178)
chr5 (72-228)||(24270023-24270180)
chr5 (72-227)||(26137262-26137419)
chr5 (155-227)||(27132994-27133067)
chr5 (72-227)||(6919347-6919502)
chr5 (146-228)||(13296682-13296764)
chr5 (154-227)||(95266-95340)
chr5 (143-220)||(19522104-19522182)
chr5 (142-227)||(24487633-24487719)
chr5 (155-227)||(7607604-7607677)
chr5 (72-188)||(43117696-43117813)
chr5 (154-213)||(15480583-15480643)
chr5 (154-228)||(21306896-21306971)
chr5 (154-228)||(21314734-21314809)
chr5 (154-227)||(18333465-18333539)
chr5 (142-227)||(37782038-37782124)
chr5 (142-226)||(1564555-1564640)
chr5 (155-227)||(8287812-8287884)
chr5 (154-198)||(28510130-28510175)
chr5 (155-227)||(29909722-29909795)
chr5 (164-227)||(7369734-7369798)
chr5 (72-172)||(16704636-16704736)
chr5 (154-227)||(60097-60171)
chr5 (154-227)||(9368840-9368914)
chr5 (154-227)||(13296902-13296976)
chr5 (154-227)||(17352435-17352509)
chr5 (155-228)||(19522330-19522403)
chr5 (154-227)||(24346501-24346575)
chr5 (156-213)||(24647720-24647778)
chr5 (154-227)||(32908718-32908792)
chr5 (154-227)||(38976943-38977017)
chr5 (124-216)||(20225062-20225155)
chr5 (155-207)||(21209709-21209762)
chr5 (155-227)||(42295589-42295662)
chr5 (154-225)||(15438999-15439071)
chr5 (128-227)||(17352642-17352742)
chr5 (75-194)||(32908873-32908993)
[»] chr4 (61 HSPs)
chr4 (72-228)||(22231226-22231383)
chr4 (72-227)||(35819046-35819202)
chr4 (70-227)||(40717357-40717515)
chr4 (136-228)||(12869245-12869338)
chr4 (73-217)||(21646421-21646565)
chr4 (72-215)||(4645664-4645808)
chr4 (142-227)||(35788669-35788755)
chr4 (142-227)||(52559577-52559663)
chr4 (111-227)||(11036703-11036820)
chr4 (76-227)||(6218214-6218366)
chr4 (142-213)||(14783175-14783247)
chr4 (142-227)||(1518174-1518260)
chr4 (142-227)||(21498364-21498450)
chr4 (154-227)||(22231073-22231147)
chr4 (119-227)||(17111574-17111682)
chr4 (155-227)||(21498805-21498878)
chr4 (145-228)||(37836089-37836173)
chr4 (142-225)||(50543318-50543402)
chr4 (142-225)||(50543555-50543639)
chr4 (82-200)||(7926365-7926484)
chr4 (72-175)||(28245679-28245782)
chr4 (154-220)||(53559290-53559357)
chr4 (142-227)||(9685408-9685494)
chr4 (154-227)||(22827548-22827622)
chr4 (154-227)||(22845447-22845521)
chr4 (154-227)||(22863484-22863558)
chr4 (142-227)||(25052862-25052948)
chr4 (142-227)||(35609699-35609785)
chr4 (154-227)||(35788904-35788978)
chr4 (142-227)||(53814917-53815003)
chr4 (142-227)||(53828511-53828597)
chr4 (155-227)||(9685642-9685715)
chr4 (155-227)||(28245527-28245600)
chr4 (155-227)||(53814675-53814748)
chr4 (111-218)||(22445471-22445579)
chr4 (72-227)||(35796895-35797051)
chr4 (154-227)||(12869029-12869103)
chr4 (154-227)||(39902563-39902637)
chr4 (155-227)||(20821983-20822056)
chr4 (142-205)||(40716609-40716673)
chr4 (145-227)||(5846156-5846239)
chr4 (154-227)||(6218449-6218523)
chr4 (147-220)||(6666628-6666702)
chr4 (166-227)||(9279237-9279299)
chr4 (154-227)||(11036511-11036585)
chr4 (109-200)||(4464332-4464425)
chr4 (155-227)||(54054806-54054879)
chr4 (154-213)||(5398476-5398536)
chr4 (142-225)||(24513348-24513431)
chr4 (155-225)||(2463818-2463889)
chr4 (154-212)||(40726746-40726805)
chr4 (142-227)||(400553-400639)
chr4 (154-207)||(28073181-28073235)
chr4 (35-73)||(31254451-31254489)
chr4 (142-219)||(34358018-34358096)
chr4 (154-227)||(35609490-35609564)
chr4 (154-227)||(35796742-35796816)
chr4 (178-227)||(28246110-28246159)
chr4 (104-177)||(30530112-30530185)
chr4 (104-227)||(9908781-9908905)
chr4 (154-213)||(10361999-10362059)
[»] scaffold0129 (1 HSPs)
scaffold0129 (122-227)||(14313-14419)
[»] chr3 (52 HSPs)
chr3 (75-227)||(4155334-4155487)
chr3 (73-227)||(20327768-20327923)
chr3 (116-227)||(16926911-16927023)
chr3 (117-227)||(54368526-54368637)
chr3 (109-227)||(54567902-54568021)
chr3 (142-227)||(1723064-1723150)
chr3 (142-227)||(11589795-11589881)
chr3 (72-200)||(20303303-20303432)
chr3 (116-227)||(35038390-35038502)
chr3 (142-227)||(16239601-16239687)
chr3 (145-224)||(12930119-12930199)
chr3 (72-227)||(45828029-45828185)
chr3 (142-220)||(45138959-45139038)
chr3 (159-228)||(20327619-20327689)
chr3 (72-227)||(31317239-31317397)
chr3 (154-227)||(31317476-31317550)
chr3 (154-227)||(35038194-35038268)
chr3 (104-204)||(8142597-8142698)
chr3 (72-227)||(13574838-13574995)
chr3 (154-213)||(24866221-24866281)
chr3 (155-212)||(1353473-1353531)
chr3 (154-227)||(4155569-4155643)
chr3 (154-227)||(8018978-8019052)
chr3 (142-227)||(17638245-17638330)
chr3 (143-220)||(22729117-22729195)
chr3 (154-226)||(7697398-7697471)
chr3 (143-227)||(9272971-9273056)
chr3 (156-207)||(13574686-13574738)
chr3 (155-218)||(50052540-50052604)
chr3 (154-213)||(8142408-8142467)
chr3 (141-227)||(39269341-39269428)
chr3 (157-227)||(45138805-45138876)
chr3 (153-227)||(45828256-45828331)
chr3 (155-213)||(47702410-47702469)
chr3 (158-227)||(472064-472134)
chr3 (159-207)||(32215520-32215569)
chr3 (156-227)||(33205475-33205547)
chr3 (141-227)||(17001408-17001495)
chr3 (154-228)||(20303064-20303139)
chr3 (142-212)||(28087203-28087274)
chr3 (154-227)||(50083080-50083155)
chr3 (35-73)||(472104-472142)
chr3 (159-212)||(6487338-6487392)
chr3 (158-227)||(18757852-18757922)
chr3 (142-227)||(27670381-27670466)
chr3 (142-194)||(1800068-1800121)
chr3 (142-186)||(21833399-21833444)
chr3 (122-214)||(26272292-26272385)
chr3 (142-206)||(33640076-33640141)
chr3 (154-218)||(34610580-34610645)
chr3 (35-67)||(21387363-21387395)
chr3 (70-134)||(46139366-46139430)
[»] scaffold0519 (4 HSPs)
scaffold0519 (116-227)||(1926-2038)
scaffold0519 (154-227)||(2161-2235)
scaffold0519 (35-73)||(1918-1956)
scaffold0519 (35-73)||(2153-2191)
[»] chr2 (56 HSPs)
chr2 (72-227)||(2029779-2029935)
chr2 (72-227)||(14466328-14466484)
chr2 (72-207)||(16419297-16419433)
chr2 (72-227)||(40379362-40379518)
chr2 (121-227)||(29718338-29718445)
chr2 (139-213)||(10570994-10571069)
chr2 (142-227)||(5711663-5711749)
chr2 (142-227)||(28407781-28407867)
chr2 (155-227)||(19191611-19191684)
chr2 (72-177)||(40149154-40149259)
chr2 (72-227)||(17719410-17719566)
chr2 (142-227)||(2324250-2324336)
chr2 (154-227)||(5711439-5711513)
chr2 (154-227)||(16419512-16419586)
chr2 (154-227)||(40379209-40379283)
chr2 (73-213)||(24395887-24396028)
chr2 (72-227)||(15124701-15124857)
chr2 (72-227)||(33606207-33606363)
chr2 (116-227)||(36352121-36352233)
chr2 (72-193)||(93272-93394)
chr2 (154-227)||(2030014-2030088)
chr2 (109-193)||(93582-93667)
chr2 (136-218)||(21591801-21591884)
chr2 (158-227)||(2324484-2324554)
chr2 (142-227)||(5509089-5509175)
chr2 (154-227)||(17719576-17719650)
chr2 (154-227)||(25082537-25082611)
chr2 (154-227)||(30006579-30006653)
chr2 (154-227)||(30063267-30063341)
chr2 (70-156)||(30701174-30701260)
chr2 (142-227)||(37840347-37840433)
chr2 (162-227)||(17525347-17525412)
chr2 (155-227)||(17854693-17854766)
chr2 (155-227)||(40149004-40149077)
chr2 (72-172)||(16533378-16533478)
chr2 (136-227)||(17854911-17855003)
chr2 (136-207)||(27897588-27897660)
chr2 (116-227)||(32356396-32356507)
chr2 (161-227)||(32884117-32884184)
chr2 (155-228)||(8424897-8424971)
chr2 (142-206)||(21383658-21383723)
chr2 (154-206)||(31700745-31700798)
chr2 (155-227)||(36316052-36316125)
chr2 (159-227)||(37769948-37770017)
chr2 (154-228)||(5851681-5851757)
chr2 (122-177)||(31700940-31700995)
chr2 (164-209)||(5450500-5450546)
chr2 (35-73)||(15518762-15518800)
chr2 (154-226)||(15988423-15988497)
chr2 (154-219)||(42639614-42639680)
chr2 (159-227)||(5509323-5509392)
chr2 (142-198)||(27036403-27036460)
chr2 (182-215)||(32810890-32810923)
chr2 (72-157)||(34893506-34893591)
chr2 (142-213)||(13210550-13210622)
chr2 (154-218)||(21383284-21383351)
[»] chr1 (69 HSPs)
chr1 (72-227)||(4098321-4098476)
chr1 (72-227)||(30369845-30370001)
chr1 (72-213)||(35772053-35772195)
chr1 (116-228)||(17452790-17452903)
chr1 (140-227)||(3169776-3169864)
chr1 (124-227)||(4112976-4113080)
chr1 (72-227)||(39348270-39348426)
chr1 (72-226)||(26176919-26177074)
chr1 (142-220)||(29265970-29266049)
chr1 (73-227)||(38668135-38668290)
chr1 (155-228)||(17452680-17452754)
chr1 (154-227)||(40079162-40079236)
chr1 (72-212)||(2859545-2859686)
chr1 (72-207)||(35892086-35892222)
chr1 (142-227)||(51589236-51589322)
chr1 (142-227)||(51589816-51589902)
chr1 (109-205)||(31496326-31496423)
chr1 (108-207)||(8870864-8870964)
chr1 (72-215)||(27413369-27413513)
chr1 (72-218)||(33156752-33156900)
chr1 (142-220)||(25145708-25145787)
chr1 (145-227)||(51589002-51589085)
chr1 (154-207)||(25255341-25255395)
chr1 (154-227)||(35772274-35772348)
chr1 (154-218)||(31432230-31432295)
chr1 (72-212)||(51460360-51460501)
chr1 (158-227)||(28408043-28408116)
chr1 (154-228)||(26865358-26865433)
chr1 (124-171)||(32783251-32783298)
chr1 (154-227)||(2859392-2859466)
chr1 (72-212)||(12376591-12376732)
chr1 (154-227)||(26177153-26177227)
chr1 (154-227)||(32223773-32223847)
chr1 (154-227)||(39348119-39348193)
chr1 (154-227)||(41035827-41035901)
chr1 (154-227)||(52650771-52650845)
chr1 (154-227)||(26173230-26173298)
chr1 (142-227)||(26346957-26347042)
chr1 (109-170)||(38733219-38733280)
chr1 (141-228)||(35892300-35892388)
chr1 (168-227)||(38668370-38668430)
chr1 (154-213)||(42586439-42586499)
chr1 (154-228)||(22377541-22377616)
chr1 (155-213)||(25137304-25137363)
chr1 (154-220)||(25145485-25145552)
chr1 (154-229)||(39544404-39544478)
chr1 (155-213)||(51590062-51590121)
chr1 (154-227)||(855991-856065)
chr1 (35-73)||(2859436-2859474)
chr1 (154-227)||(4112540-4112614)
chr1 (142-227)||(11234226-11234312)
chr1 (154-227)||(15986333-15986407)
chr1 (154-227)||(20208528-20208600)
chr1 (72-134)||(25713262-25713324)
chr1 (154-227)||(31181513-31181587)
chr1 (154-227)||(33157231-33157305)
chr1 (142-227)||(40316038-40316124)
chr1 (154-227)||(51459705-51459779)
chr1 (109-186)||(51460005-51460083)
chr1 (142-226)||(5953725-5953810)
chr1 (159-207)||(11924951-11925000)
chr1 (178-227)||(12244987-12245036)
chr1 (40-73)||(35772266-35772299)
chr1 (155-227)||(52127731-52127803)
chr1 (155-227)||(52907394-52907467)
chr1 (76-157)||(52961428-52961509)
chr1 (40-73)||(52961584-52961617)
chr1 (35-71)||(369639-369675)
chr1 (35-71)||(4098446-4098482)
[»] scaffold0048 (2 HSPs)
scaffold0048 (123-227)||(81852-81957)
scaffold0048 (154-202)||(82111-82160)
[»] scaffold0692 (2 HSPs)
scaffold0692 (72-227)||(5672-5828)
scaffold0692 (154-227)||(5544-5618)
[»] scaffold0092 (1 HSPs)
scaffold0092 (109-227)||(5665-5784)
[»] scaffold0005 (2 HSPs)
scaffold0005 (142-213)||(56483-56555)
scaffold0005 (154-228)||(288657-288732)
[»] scaffold0481 (1 HSPs)
scaffold0481 (142-227)||(3459-3545)
[»] scaffold0400 (1 HSPs)
scaffold0400 (72-218)||(3864-4011)
[»] scaffold0365 (1 HSPs)
scaffold0365 (72-218)||(4508-4655)
[»] scaffold0766 (1 HSPs)
scaffold0766 (157-227)||(6284-6355)
[»] scaffold0334 (1 HSPs)
scaffold0334 (156-227)||(4431-4503)
[»] scaffold0047 (1 HSPs)
scaffold0047 (109-228)||(12656-12776)
[»] scaffold0181 (1 HSPs)
scaffold0181 (154-212)||(20964-21023)
[»] scaffold0045 (1 HSPs)
scaffold0045 (108-188)||(41160-41241)
[»] scaffold0542 (1 HSPs)
scaffold0542 (72-140)||(5727-5795)
[»] scaffold0083 (2 HSPs)
scaffold0083 (76-152)||(51359-51435)
scaffold0083 (144-227)||(51246-51330)
[»] scaffold0024 (1 HSPs)
scaffold0024 (154-227)||(89553-89627)
[»] scaffold0003 (1 HSPs)
scaffold0003 (154-205)||(347571-347623)


Alignment Details
Target: chr8 (Bit Score: 104; Significance: 6e-52; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 20094713 - 20094868
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || |||||| |||||  ||||  |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  20094713 gtggacataaatggtgggtggcctgatagcgaaaacctgataggaggtggcccaatggatcttgaagaaactctgataccaacttataaatcgtggttgg 20094812  T
Q  172 gcctaaacaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||    
T  20094813 gcctaaacaaccccacaaaaccggcttgtaaggtgaggattgcccccacatataaa 20094868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 109 - 227
Target Start/End: Original strand, 24532376 - 24532495
Alignment:
Q  109 tgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    |||||| ||||| ||||||||||||| |||   ||||||||||| |||||||||| ||||||||||||| ||||||||||| ||||||||||| ||||||    
T  24532376 tgatagcaggtggcccaatggatcttgaaggggctctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtga 24532475  T
Q  208 tgattgtccccacatataaa 227  Q
    |||||| |||||| ||||||    
T  24532476 tgattgcccccacttataaa 24532495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 227
Target Start/End: Complemental strand, 41790823 - 41790669
Alignment:
Q  73 tggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttggg 172  Q
    |||||||||||| || ||||| ||||||   |||  |||||| ||||| ||||||||||||| ||||  ||||||||||| |||||||||||||||||||    
T  41790823 tggacataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttggg 41790724  T
Q  173 cctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||| ||||||| ||| ||||||||| | |||||| |||||||||||| ||||||    
T  41790723 cctaacacaaccc-acaaaaccggcttatgaggtgaggattgtccccacttataaa 41790669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 11232391 - 11232503
Alignment:
Q  116 aggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgt 214  Q
    ||||| |||||||||||||  |||  ||||||||||| ||||||||| |||||||||||||| ||||||||||| |||||||||||||||||| |||||     
T  11232391 aggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgc 11232490  T
Q  215 ccccacatataaa 227  Q
    |||||| ||||||    
T  11232491 ccccacttataaa 11232503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 11232162 - 11232268
Alignment:
Q  122 cccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    |||||||||||||  |||  ||||||||||| ||||||||| |||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||||    
T  11232162 cccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccac 11232261  T
Q  221 atataaa 227  Q
     ||||||    
T  11232262 ttataaa 11232268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 227
Target Start/End: Complemental strand, 20301424 - 20301271
Alignment:
Q  75 gacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcc 174  Q
    |||||||||| || |||| |||||||   |||  |||||| ||||| ||||||||||||| ||||  ||||||||||| |||||||||||||||||||||    
T  20301424 gacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcc 20301325  T
Q  175 taa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||| |||||| |||| ||| ||||||| |||| | ||||| |||||| ||||||    
T  20301324 taacacaacctcacaaaacgggcttgtgaggttaggattgcccccacttataaa 20301271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 227
Target Start/End: Complemental strand, 21088056 - 21087903
Alignment:
Q  75 gacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcc 174  Q
    |||||||||| || |||| |||||||   |||  |||||| ||||| ||||||||||||| ||||  ||||||||||| |||||||||||||||||||||    
T  21088056 gacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcc 21087957  T
Q  175 taa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||| |||||| |||| ||| ||||||| |||| | ||||| |||||| ||||||    
T  21087956 taacacaacctcacaaaacgggcttgtgaggttaggattgcccccacttataaa 21087903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 39052847 - 39053003
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || |||||| |||||   |||  |||||| ||| | || ||||||||||  |||  |||| |||||| |||||||||||| |||||    
T  39052847 gtggacataaatggtgggtggccggatagcggaaacctgatagcagggggccaaatggatcttggagaggctctaataccatcttagaaatcgttgttgg 39052946  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  39052947 gcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 39053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 4828164 - 4828078
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  ||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||| |||||||||||| ||||||    
T  4828164 ctctgataccatattagagatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgtccccacttataaa 4828078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 37001395 - 37001236
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaa---ctctgataccaacttagaaatcgtggt 168  Q
    ||||| || ||||||| ||||||||||||   |||  ||| || ||||| ||||||||||||| | |||    ||||||||||| ||| |||||||||||    
T  37001395 gtggaaatgaatgatgggtggcccgatagcggaaacctgacagcaggtggcccaatggatcttgatgaagaggctctgataccatctttgaaatcgtggt 37001296  T
Q  169 tgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| ||||| ||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  37001295 tgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacctataaa 37001236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 20094583 - 20094642
Alignment:
Q  14 gagatgaattgaaggtaaggattgtaaggtaaggattgccctcacttataaacacattgt 73  Q
    |||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  20094583 gagatgaattgaaggtaaggattgtaaggtaaggattgtccccacatataaacacattgt 20094642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 227
Target Start/End: Original strand, 5932100 - 5932258
Alignment:
Q  70 ttgtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggtt 169  Q
    |||| |||||||||| || |||||||||||    |||  |||||| |||||  ||||||||||||  |||  ||||||||||| |||| |||| ||||||    
T  5932100 ttgtcgacataaatggtgggtggcccgataacggaaacgtgatagtaggtggtccaatggatcttggagaggctctgataccatcttaaaaatggtggtt 5932199  T
Q  170 gggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||| ||||||||||| ||| ||||||| |||||| | ||| |||||| ||||||    
T  5932200 gggcctaacacaaccccacaaaacaggcttgtgaggtgaggcttgcccccacttataaa 5932258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 17469914 - 17469828
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  |||||||||||||||| |||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  17469914 ctctgataccatattagaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 17469828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 19256808 - 19256894
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||||| |||| |||||| |||||| ||||| |||||| ||||||    
T  19256808 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaacctgcttgtgaggtgaggattgcccccacttataaa 19256894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 37001548 - 37001474
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| | |||| |||||||||||| ||||||    
T  37001548 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgatgtgaggattgtccccacttataaa 37001474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 228
Target Start/End: Complemental strand, 8084293 - 8084136
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || |||  || ||||  ||||  |||||| | ||| |||||||||||||  |||  ||||||||||| ||||||||||||||||||    
T  8084293 gtggacataaatggtgggtgatccaatagcgaaaacctgatagcatgtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgg 8084194  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    | |||| ||||| || || |||| |||||| |||||| ||||| |||||| |||||||    
T  8084193 gtctaacacaactccgcaaaaccagcttgtgaggtgaggattgcccccacttataaat 8084136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 19256587 - 19256660
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  19256587 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 19256660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 24075307 - 24075380
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  24075307 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 24075380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 35682781 - 35682855
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||  |||||| ||||| |||||| ||||||    
T  35682781 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgcgaggtgaggattgcccccacttataaa 35682855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 10884160 - 10884084
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccc 218  Q
    ||||||||||| |||||||||||||||||||||||| ||||||| ||| ||||||||||| |||||| ||||| ||||    
T  10884160 ctctgataccatcttagaaatcgtggttgggcctaacacaaccc-acaaaaccggcttgtgaggtgaggattgccccc 10884084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 17477148 - 17477075
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  17477148 ttagaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 17477075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 27205048 - 27204975
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataa 226  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| | |||||| ||||| |||||| |||||    
T  27205048 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgcccccacttataa 27204975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 27205146 - 27205073
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataa 226  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| | |||||| ||||| |||||| |||||    
T  27205146 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgcccccacttataa 27205073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 27205244 - 27205171
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataa 226  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| | |||||| ||||| |||||| |||||    
T  27205244 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgcccccacttataa 27205171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 39960276 - 39960211
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccc 218  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| ||||    
T  39960276 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccccc 39960211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 4828375 - 4828303
Alignment:
Q  156 tagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  4828375 tagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 4828303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 227
Target Start/End: Original strand, 8466678 - 8466798
Alignment:
Q  109 tgataggaggtgacccaatggatcttaaagaaa-ctctgataccaacttagaaatcgtggttgggcc-taaacaaccccacacaaccggcttgtaaggtg 206  Q
    |||||| ||||| ||||||||||||| ||  || || |||||||| ||||||||| ||||||||| | || ||||||||| | |||| |||||| |||||    
T  8466678 tgatagcaggtggcccaatggatcttgaaccaagctttgataccatcttagaaattgtggttgggtcgtacacaaccccataaaaccagcttgtgaggtg 8466777  T
Q  207 atgattgtccccacatataaa 227  Q
    | |||||||||||| ||||||    
T  8466778 aggattgtccccacttataaa 8466798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 42846605 - 42846665
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| |||||    
T  42846605 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattg 42846665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 218
Target Start/End: Original strand, 3157477 - 3157624
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||| ||||||||  ||||  |||||| |||||  ||||||||| ||  |||  |||||||| || |||| |||| |||||||     
T  3157477 gtggacataaatggtgggtgtcccgatagcgaaaacctgatagcaggtggtccaatggattttggagaggctctgatatcatcttataaatggtggttga 3157576  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccc 218  Q
    |||||| ||||||||||| ||| ||||||| |||||| ||||| ||||    
T  3157577 gcctaacacaaccccacaaaactggcttgtgaggtgaggattgccccc 3157624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 12547182 - 12547108
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| |||||||    
T  12547182 cttagaaatcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaagattg-ccccacttataaat 12547108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 12317142 - 12317056
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||||| || | |||| | |||||| ||||| |||||| ||||||    
T  12317142 ctctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaatcagcttatgaggtgaggattgcccccacttataaa 12317056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 7267466 - 7267539
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||| ||||||||| |||| ||||||| ||| ||||||||||| |||||||||||| |||||| ||||||    
T  7267466 ttagaaatggtggttgggtctaacacaaccctacaaaaccggcttgtgaggtgatgattgcccccacttataaa 7267539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 38475838 - 38475757
Alignment:
Q  147 ataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| ||||||| | |||||||||||||| ||||||| ||| ||||||||||| |||||| ||||| |||||| ||||||    
T  38475838 ataccatcttagaatttgtggttgggcctaacacaaccctacaaaaccggcttgtgaggtgaggattgcccccacttataaa 38475757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 39743612 - 39743539
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||| |||||| ||||| ||| || ||||||    
T  39743612 ttagaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccccaacttataaa 39743539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 7669585 - 7669429
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || |||| ||||||||  |||  |||||| ||||| | ||||||||||| |||| ||| |||||||| |||| |||| || |        
T  7669585 gtggacataaatggtgggtggtccgatagtggaaacctgatagcaggtggctcaatggatcttgaagagactttgataccatcttaaaaattgtcgccat 7669486  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| | ||||||||| |||| | ||||||| ||||||||| |||||| ||||||    
T  7669485 gcctaacataaccccacaaaaccagtttgtaagatgatgattgcccccacttataaa 7669429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 8929103 - 8929035
Alignment:
Q  152 aacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccca 219  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||||||| |||||  ||||| |||||    
T  8929103 aacttagaattcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgcggattgccccca 8929035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 12688238 - 12688082
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||||| ||||   |||  |||||| ||||| ||||||||||||| ||||  |||| ||| || ||||||||||||| |||     
T  12688238 gtggacataaatggtgggtggcccaatagaagaaacctgatagcaggtggcccaatggatcttgaagaggctctaatatcatcttagaaatcgtgtttga 12688139  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    | |||| | ||| ||||| ||||||||||| |||||  ||||| || ||| ||||||    
T  12688138 gtctaacataactccacaaaaccggcttgtgaggtggggattgccctcacttataaa 12688082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 207
Target Start/End: Complemental strand, 31197780 - 31197645
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || |||| |||||||   |||  |||||| ||||| ||||||||||||   |||  ||||||||||| |||||||||| |||||||    
T  31197780 gtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatctcggagaggctctgataccatcttagaaatc-tggttgg 31197682  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    |||||| ||||||| ||| ||||| ||| | ||||||    
T  31197681 gcctaacacaaccctacaaaaccgacttttgaggtga 31197645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 219
Target Start/End: Original strand, 37868505 - 37868649
Alignment:
Q  76 acataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcct 175  Q
    ||||||||| || ||||||| ||||   ||| |||||||  |||| |||||||||||||  |||  || |||||||| |||| ||||||||||| |||||    
T  37868505 acataaatggtgggtggcccaatagcggaaacttgatagcgggtggcccaatggatcttggagaggctatgataccatcttaaaaatcgtggttaggcct 37868604  T
Q  176 aa-acaaccccacacaaccggcttgtaaggtgatgattgtcccca 219  Q
    || ||||  ||||| |||| |||||| |||||| ||||| |||||    
T  37868605 aacacaattccacaaaaccagcttgtgaggtgaggattgccccca 37868649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 5590357 - 5590435
Alignment:
Q  143 tctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    ||||||||||  |||||||| |||||||||||||| |||||| |||| ||||||||||| | |||| ||||| ||||||    
T  5590357 tctgataccattttagaaattgtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccac 5590435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 5931949 - 5932023
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||| |||| |||||||||||||| | ||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  5931949 cttaaaaatggtggttgggcctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 5932023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 15042670 - 15042744
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||| |||||| ||||||||||| || ||| |||  |||||||||||| |||||| ||||||    
T  15042670 cttagaaatcgtggttgagcctaacacaaccccacaaaatcggtttgcgaggtgatgattgcccccacttataaa 15042744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 22638179 - 22638253
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||||||  ||||| ||||| ||| || ||||||    
T  22638179 cttagaaatcgtggttgggcttaacacaaccccacaaaaccggcttgtgtggtgaggattgcccctacttataaa 22638253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 26800514 - 26800584
Alignment:
Q  156 tagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatata 225  Q
    ||||||| |||||||||||||| ||||||||||| |||||||||||  ||||| ||||| |||||| ||||    
T  26800514 tagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgtggtgaggattgcccccacttata 26800584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 34653233 - 34653187
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgt 200  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  34653233 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgt 34653187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 34842774 - 34842688
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  |||||||||||||||| |||||| ||||||||||| ||||| | | | |||||| ||||| |||||| ||||||    
T  34842774 ctctgataccatattagaaatcgtggttgagcctaacacaaccccacaaaaccgacctatgaggtgaggattgcccccacttataaa 34842688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 4963437 - 4963384
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||| ||||||    
T  4963437 ttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtga 4963384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 8716235 - 8716138
Alignment:
Q  118 gtgacccaatggatcttaaagaaa-ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    ||||| ||||||||||||| |||  |||||||||||  ||||||||| |||||||| |||| ||||||||||| || |||||| | |||||| |||||    
T  8716235 gtgactcaatggatcttaacgaaggctctgataccatattagaaatcttggttgggtctaacacaaccccacaaaatcggcttatgaggtgaggattg 8716138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 42049676 - 42049761
Alignment:
Q  143 tctgataccaacttagaaatcgtggttgggccta-aacaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| ||| |||||||||||||||| ||||||  |||||| |||| |||||||||||  ||||| ||||| |||||| ||||||    
T  42049676 tctgatgccatcttagaaatcgtggttaggcctaccacaacctcacaaaaccggcttgtggggtgaggattgcccccacttataaa 42049761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 422441 - 422513
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    ||||||||||| ||||||||| ||||||||||| || ||||||||||| || |||||| | || |||||||||    
T  422441 ctctgataccatcttagaaattgtggttgggccaaacacaaccccacaaaatcggcttatgagctgatgattg 422513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 8860798 - 8860858
Alignment:
Q  109 tgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggtt 169  Q
    ||||||||||||| | |||||||||| |||| |||||||||  | ||||||||||||||||    
T  8860798 tgataggaggtgatctaatggatcttgaagagactctgatattatcttagaaatcgtggtt 8860858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 10614879 - 10614998
Alignment:
Q  94 ccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaac 192  Q
    |||||||  |||| ||||| | |||||  ||||||||||||  |||  || ||||| || |||| |||||||||||| |||||| ||||||||||| ||     
T  10614879 ccgatagcaaaaacttgattgcaggtggtccaatggatcttggagaggctatgatatcatcttataaatcgtggttgagcctaatacaaccccacaaaat 10614978  T
Q  193 cggcttgtaaggtgatgatt 212  Q
    |||||||| |||||| ||||    
T  10614979 cggcttgtgaggtgaagatt 10614998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 227
Target Start/End: Original strand, 26208172 - 26208323
Alignment:
Q  78 ataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaa-ctctgataccaacttagaaatcgtggttgggccta 176  Q
    ||||||| || |||||||| |||  ||||  |||||| ||||| ||||| |||||||| ||||  ||||||||||| ||||||||| |||| ||| ||||    
T  26208172 ataaatggtgggtggcccgttagggaaaacctgatagcaggtggcccaacggatcttagagaaggctctgataccatcttagaaattgtggatggaccta 26208271  T
Q  177 a-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    | ||||||||| | ||| ||||| | | |||  ||||| |||||| ||||||    
T  26208272 acacaaccccataaaactggcttatgatgtggagattgcccccacttataaa 26208323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 38447442 - 38447501
Alignment:
Q  169 tgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  38447442 tgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 38447501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 38476134 - 38476075
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgt 200  Q
    ||||||||||| ||||||||| |||||||||||||| | || |||||| |||||||||||    
T  38476134 ctctgataccatcttagaaattgtggttgggcctaacataatcccacaaaaccggcttgt 38476075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 45122418 - 45122367
Alignment:
Q  165 tggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtc 215  Q
    ||||||||||||| ||||||||||  |||||||||||||||||| |||||||    
T  45122418 tggttgggcctaacacaaccccacgaaaccggcttgtaaggtgaggattgtc 45122367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 10450084 - 10450010
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||| |||||| ||||||| ||| ||||||||| | |||||| ||||| || ||| ||||||    
T  10450084 cttagaaatcgtggttgagcctaacacaaccctacaaaaccggcttctgaggtgaggattgcccacacttataaa 10450010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 11232238 - 11232276
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacattgt 73  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  11232238 ttgtaaggtgaggattgcccccacttataaacacattgt 11232276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 11232473 - 11232511
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacattgt 73  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  11232473 ttgtaaggtgaggattgcccccacttataaacacattgt 11232511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 12688347 - 12688309
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacattgt 73  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  12688347 ttgtgaggtaaggattgcccccacttataaacacattgt 12688309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 213
Target Start/End: Complemental strand, 16050191 - 16050053
Alignment:
Q  76 acataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcct 175  Q
    |||||||||| | |||||||||||    |||| |||||  ||||| ||||| | ||| | ||||  |||||||||||  |||||| ||||||||||| ||    
T  16050191 acataaatgacgggtggcccgataacggaaatctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaagtcgtggttgggtct 16050092  T
Q  176 aa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    || ||||||||||| ||| | ||||| |||||| |||||    
T  16050091 aacacaaccccacaaaactgacttgtgaggtgaggattg 16050053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 18939297 - 18939371
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| |||||||||||||| |||||| |||| || | |||||| |||||| ||||| |||||| ||||||    
T  18939297 cttagaaatggtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgcccccacttataaa 18939371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 25325730 - 25325656
Alignment:
Q  154 cttagaaatcgtggttgggcct-aaacaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||| ||||||| ||||| ||| ||||||| ||| || |||||  ||||| ||||||    
T  25325730 cttagaaatcgtggttgggcctaaaacaactccacaaaactggcttgtgaggagaggattgcacccacttataaa 25325656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 10454510 - 10454449
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgt 214  Q
    ||||||||||||||||| |||||| ||||||| ||| ||||||||| | |||||| ||||||    
T  10454510 cttagaaatcgtggttgagcctaacacaaccctacaaaaccggcttctgaggtgaggattgt 10454449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 15042935 - 15042968
Alignment:
Q  40 aggtaaggattgccctcacttataaacacattgt 73  Q
    ||||||||||||||| ||||||||||||||||||    
T  15042935 aggtaaggattgcccccacttataaacacattgt 15042968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 18004247 - 18004332
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaactta 157  Q
    ||||||||||||| || ||||||||||||   |||  |||||| ||||| |||||||||||||  |||  ||||||||||| ||||    
T  18004247 gtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatctta 18004332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 227
Target Start/End: Original strand, 27439512 - 27439621
Alignment:
Q  119 tgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcct-aaacaaccccacacaaccggcttgtaaggtgatgattgtccc 217  Q
    |||||||| |||||||| ||| |||||||||||| |||| || |||| |||| |||| | ||||| ||||| |||| |||||| ||| || ||||| |||    
T  27439512 tgacccaacggatcttagagagactctgataccatcttaaaactcgtagttgagcctgacacaacgccacaaaaccagcttgtgaggcgaggattgaccc 27439611  T
Q  218 cacatataaa 227  Q
     || ||||||    
T  27439612 tacttataaa 27439621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 36917409 - 36917514
Alignment:
Q  124 caatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacat 222  Q
    |||||||||||  |||  ||||||||||| ||||||||| ||||||| || ||| ||||||||||| ||| | ||||| | |||| ||||  |||||| |    
T  36917409 caatggatcttggagaggctctgataccatcttagaaatggtggttgtgcttaacacaaccccacaaaactgacttgtgatgtgaggattacccccactt 36917508  T
Q  223 ataaat 228  Q
    ||||||    
T  36917509 ataaat 36917514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 5676011 - 5676079
Alignment:
Q  109 tgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa 177  Q
    |||||| ||||| || | || ||||| |||| ||||||||| || |||||||||||||||||| |||||    
T  5676011 tgatagcaggtggcctagtgaatcttgaagagactctgatatcatcttagaaatcgtggttggacctaa 5676079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 26208013 - 26208069
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatga 210  Q
    |||||||| |||||||||||||| | ||||||||| ||||||||| | |||||||||    
T  26208013 ttagaaattgtggttgggcctaacataaccccacaaaaccggcttatgaggtgatga 26208069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 4e-31; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 25620302 - 25620146
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||||| ||||   |||  |||||| ||||| |||||||||||||  |||  ||||||||||| ||||||||||||||||||    
T  25620302 gtggacataaatggtgggtggcccaatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgg 25620203  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  25620202 gcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 25620146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 29469771 - 29469615
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||||||||||   ||   |||||  ||||| |||||||||||||  |||  |||||||||||  |||||||||||||||||    
T  29469771 gtggacataaatggtgggtggcccgatagcggaagcctgataacaggtggcccaatggatcttggagaggctctgataccatattagaaatcgtggttgg 29469672  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| ||||||||||| |||||||||||||||||| ||||| |||||| ||||||    
T  29469671 gcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaa 29469615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 4886495 - 4886347
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||| |||||||  ||| ||||||| ||||| |||||||||||||  ||| || ||||||||| ||||||||||||||||||    
T  4886495 gtggacataaatggtgggtggctcgatagtagaaacttgatagcaggtggcccaatggatcttggagagaccctgataccatcttagaaatcgtggttgg 4886396  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccca 219  Q
    |||||| |||||| | |  ||||||||||| |||||| ||||| |||||    
T  4886395 gcctaacacaacctcgccaaaccggcttgtgaggtgaggattgccccca 4886347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 21861460 - 21861304
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||||||||||   |||  |||||  ||||| |||||||||||||  |||  ||||||||||| ||||||||| ||||||||    
T  21861460 gtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgg 21861361  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| |||| |||||| |||||||||||||||||| ||||| || ||| ||||||    
T  21861360 gcctaacacaatcccacaaaaccggcttgtaaggtgaggattgccctcacttataaa 21861304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 216
Target Start/End: Original strand, 44874499 - 44874641
Alignment:
Q  75 gacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcc 174  Q
    ||||||||||||| ||| |||||| ||  |||  |||||| ||||||||||||||||||| |||| |||||||||||| |||||| || |||||| ||||    
T  44874499 gacataaatgatgggtgacccgattgtggaaacctgatagcaggtgacccaatggatcttgaagagactctgataccatcttagacattgtggtttggcc 44874598  T
Q  175 taa-acaaccccacacaaccggcttgtaaggtgatgattgtcc 216  Q
    ||| |||| |||| | || ||||||||| ||||| ||||||||    
T  44874599 taacacaagcccataaaatcggcttgtagggtgaggattgtcc 44874641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 1596759 - 1596611
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||||||||||   |||  |||||  | ||| |||||||||||||  |||  ||||||||||| ||||||||| |||||| |    
T  1596759 gtggacataaatggtgggtggcccgatagcggaaacctgataacatgtggcccaatggatcttggagaggctctgataccatcttagaaattgtggttag 1596660  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    |||||| ||||||||||| |||||||||||||||||| ||||| ||||||    
T  1596659 gcctaacacaaccccaca-aaccggcttgtaaggtgaggattgcccccac 1596611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 33834357 - 33834240
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||||||||||  ||||  |||||| ||||| |||||||||||||  |||  ||||||||||| ||||||||| ||||||||    
T  33834357 gtggacataaatggtgggtggcccgatagggaaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgg 33834258  T
Q  172 gcctaa-acaaccccaca 188  Q
    |||||| |||||||||||    
T  33834257 gcctaacacaaccccaca 33834240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 31485577 - 31485733
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||| ||||||| || ||||||||||||| ||||  |||||| ||||| |||||||||||||  ||   |||| |||||| ||||||||| |||||| |    
T  31485577 gtggatataaatggtgggtggcccgatagtgaaaacctgatagtaggtggcccaatggatcttgtagcggctcttataccatcttagaaattgtggttag 31485676  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| |||||  |||| ||||||||||| |||||| ||||| |||||| ||||||    
T  31485677 gcctaacacaacttcacaaaaccggcttgtcaggtgaggattgcccccacttataaa 31485733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 36277144 - 36277300
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || |||| |||||||   |||  |||||| ||||| |||||||||||||  |||  |||||||| || ||||||||||||||||||    
T  36277144 gtggacataaatggtgggtggtccgatagcggaaacctgatagtaggtggcccaatggatcttggagaggctctgataacatcttagaaatcgtggttgg 36277243  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    | |||| ||||||||||| || || ||||| |||||| ||||| |||||| ||||||    
T  36277244 gactaacacaaccccacaaaatcgacttgtgaggtgaggattgcccccacttataaa 36277300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 228
Target Start/End: Original strand, 48661473 - 48661630
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||||||| ||   |||  |||||| ||||| | |||||| |||||||||  |||||||| ||  |||||||||||||||||    
T  48661473 gtggacataaatggtgggtggcccgaaagcggaaacctgatagcaggtggctcaatggttcttaaagaggctctgatatcatattagaaatcgtggttgg 48661572  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    | |||| |||| | |||| ||||||||||| |||||| ||||| |||||| |||||||    
T  48661573 gtctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacctataaat 48661630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 227
Target Start/End: Complemental strand, 34027555 - 34027403
Alignment:
Q  76 acataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcct 175  Q
    |||||||||| | ||||||||||| |  |||  |||||  ||||| ||||| | ||| | ||||  |||| ||||||  |||||||||||||||||||||    
T  34027555 acataaatgacgggtggcccgataatggaaacctgataacaggtggcccaaagaatcgtgaagaggctctaataccatattagaaatcgtggttgggcct 34027456  T
Q  176 aa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    || ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  34027455 aacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 34027403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 31892471 - 31892396
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||||| |||||| |||||||||||| |||||||    
T  31892471 cttagaaatcgtggttgggcctaacacatccccacaaaaccggcttgtgaggtgaagattgtccccacttataaat 31892396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 33996299 - 33996386
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    ||||||||||| |||||||||||||||||||||||| ||||| ||||| ||||| ||||| |||||| ||||| |||||| |||||||    
T  33996299 ctctgataccatcttagaaatcgtggttgggcctaacacaactccacaaaaccgacttgtgaggtgaagattgcccccacttataaat 33996386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 207
Target Start/End: Original strand, 40121912 - 40121978
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  40121912 ctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtagggtga 40121978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 29469923 - 29469850
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||| ||||| |||||| ||||||    
T  29469923 ttagaaatcgtggttgggcctaacacaactccacaaaaccggcttgtaaggtgaggattgcccccacttataaa 29469850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 6782957 - 6782885
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    |||||||||||  |||||||||||||||| |||||| ||||||||||| |||||||||||||||||| |||||    
T  6782957 ctctgataccatgttagaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtaaggtgaggattg 6782885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 10882007 - 10882079
Alignment:
Q  155 ttagaaatcgtggttgggcctaaacaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  10882007 ttagaaatcgtggttgggcctaataaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 10882079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 227
Target Start/End: Original strand, 3038055 - 3038158
Alignment:
Q  125 aatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacata 223  Q
    |||||||||| ||||  ||||||||  | |||||||||| ||||||||||||| ||||||||||| ||||||||||| | |||| ||||| |||||| ||    
T  3038055 aatggatcttgaagaggctctgatattatcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgacgtgaggattgcccccactta 3038154  T
Q  224 taaa 227  Q
    ||||    
T  3038155 taaa 3038158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 48243424 - 48243511
Alignment:
Q  141 actctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||| |||| ||||| |||||||| |||| ||||||||||| |||||||||||||| ||| ||||| |||||| ||||||    
T  48243424 actctgataccatcttaaaaatcatggttgggtctaacacaaccccacaaaaccggcttgtaagatgaggattgcccccacttataaa 48243511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 213
Target Start/End: Complemental strand, 4507066 - 4506956
Alignment:
Q  104 aaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaa 202  Q
    |||| |||||| ||||||||||||||||||| || |  ||||||||| | |||||||||||| |||||| |||| ||||||||| | ||||| ||||| |    
T  4507066 aaatctgatagcaggtgacccaatggatcttgaaaaggctctgatacaatcttagaaatcgtagttgggtctaacacaaccccataaaaccgacttgtga 4506967  T
Q  203 ggtgatgattg 213  Q
    ||||| |||||    
T  4506966 ggtgaggattg 4506956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 21054953 - 21055027
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  21054953 cttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 21055027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 21861613 - 21861539
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| |||||||||||||| ||||||||||| || ||||||||||||||| ||||| |||||| ||||||    
T  21861613 cttagaaatggtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggattgcccccacttataaa 21861539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 48243061 - 48243135
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||| ||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  48243061 cttacaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 48243135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 1000633 - 1000560
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataa 226  Q
    ||||||||||||||||||||| || ||||||||||| ||||| |||||||||||| ||||| |||||| |||||    
T  1000633 cttagaaatcgtggttgggccaaagacaaccccacaaaaccgtcttgtaaggtgaggattgcccccacttataa 1000560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 31257249 - 31257314
Alignment:
Q  136 aagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgt 200  Q
    ||||| |||||||||||  ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  31257249 aagaagctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgt 31257314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 227
Target Start/End: Original strand, 2544437 - 2544521
Alignment:
Q  144 ctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||  ||| ||||||||||||||||||| ||||||||||| ||||| ||||| |||||| ||||| |||||| ||||||    
T  2544437 ctgataccatattaaaaatcgtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgaggattgcccccacttataaa 2544521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 26562055 - 26562147
Alignment:
Q  136 aagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||| ||||||||||||  |||||||| ||||||| |||||| | ||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  26562055 aagagactctgataccatattagaaatggtggttgagcctaacataaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaa 26562147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 1596912 - 1596838
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||| ||| |||||||||||||| ||||||| ||| |||||||||||||||||| ||||| |||||| ||||||    
T  1596912 cttagtaattgtggttgggcctaacacaaccctacaaaaccggcttgtaaggtgaggattgcccccacttataaa 1596838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 17202275 - 17202189
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  ||| ||||||||||||||||||| ||||||||||| ||||||||||| || |||  |||| |||||| ||||||    
T  17202275 ctctgataccatattaaaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgagaattgcccccacttataaa 17202189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 26239904 - 26239990
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||| ||||||||| ||||||||| |||| |||||||||||  |||| ||||| |||||| ||||| |||||| ||||||    
T  26239904 ctctgataccatcttagaaattgtggttgggtctaacacaaccccacaataccgacttgtgaggtgaggattgcccccacttataaa 26239990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 34027711 - 34027637
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||||| | |||| ||||| |||||| ||||||    
T  34027711 cttagaaatcgtgattgggcctaacacaaccccacaaaaccggcttgtgaagtgaggattgcccccacttataaa 34027637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 47710527 - 47710453
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| |||||||||||||| ||||||||||| ||| ||||||| |||||| ||||| |||||| ||||||    
T  47710527 cttagaaatggtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaa 47710453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 47722183 - 47722109
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| |||||||||||||| ||||||||||| ||| ||||||| |||||| ||||| |||||| ||||||    
T  47722183 cttagaaatggtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaa 47722109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 2544220 - 2544289
Alignment:
Q  159 aaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||| |||||||| ||||||||||| ||| |||||||||||||| ||||| |||||| ||||||    
T  2544220 aaatcgtggtagggcctaacacaaccccacaaaactggcttgtaaggtgaagattgcccccacttataaa 2544289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 3519957 - 3520114
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||| ||||||||  ||||   ||||| ||||| ||||||||||| |  |||  |||||||||||||| ||||||||||||||     
T  3519957 gtggacataaatggtgggtgtcccgatagcgaaaaccagatagcaggtggcccaatggatcatggagaggctctgataccaactaagaaatcgtggttga 3520056  T
Q  172 gcctaa-acaaccc-cacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
     ||||| |||||||  | | ||||||||||  |||||| ||||| |||||| ||||||    
T  3520057 acctaacacaacccttataaaaccggcttgcgaggtgaggattgcccccacttataaa 3520114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 10903207 - 10903110
Alignment:
Q  116 aggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgatt 212  Q
    ||||| |||||||||||||  |||| |||||||| ||  |||| ||||||||||||| |||| ||||| ||||| ||||||||||| |||||| ||||    
T  10903207 aggtggcccaatggatcttggagaagctctgatatcattttagtaatcgtggttggggctaacacaactccacaaaaccggcttgtgaggtgaggatt 10903110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 10882227 - 10882274
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccaca 188  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||    
T  10882227 ctctgataccatcttagaaatcgtggttgggcctaacacaaccccaca 10882274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 21821902 - 21821823
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||||| || ||| |||| || ||| ||||| ||||||    
T  21821902 ctctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaatcggtttgtgagatgaagattgcccccac 21821823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 21861334 - 21861296
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacattgt 73  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  21861334 ttgtaaggtgaggattgccctcacttataaacacattgt 21861296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 228
Target Start/End: Complemental strand, 31892318 - 31892160
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggtt-g 170  Q
    ||||||||||||| || |||||| ||||    |||  |||||| ||||| |||||| | ||||  |||  ||||||| ||| |||||| |||| |||| |    
T  31892318 gtggacataaatggtgggtggcctgataacggaaacctgatagcaggtggcccaataggtcttggagaggctctgattccatcttagagatcggggtttg 31892219  T
Q  171 ggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    ||||||| | ||| ||||| ||||||||||| |||||| |||||||||||| |||||||    
T  31892218 ggcctaacataactccacaaaaccggcttgtgaggtgaggattgtccccacttataaat 31892160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 43688160 - 43688233
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||  |||| | ||||| |||||| ||||||    
T  43688160 cttagaaatcgtggttgggcctaacacaaccccaca-aaccggcttgagaggtaaggattgcccccacttataaa 43688233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 170
Target Start/End: Original strand, 2404363 - 2404424
Alignment:
Q  109 tgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttg 170  Q
    |||||| |||||||||||||||| |  ||||  ||||||||||| |||||||||||||||||    
T  2404363 tgatagcaggtgacccaatggatttcgaagaggctctgataccatcttagaaatcgtggttg 2404424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 5871905 - 5872002
Alignment:
Q  104 aaatttgataggaggtgacccaatggatcttaaagaaa-ctctgataccaacttagaaatcgtggttgggcctaaacaaccccacacaaccggcttgt 200  Q
    |||| |||||| ||||||| ||||||||||||| | |  |||||||| || ||||||||||||||||||| ||| || |||| ||| || ||||||||    
T  5871905 aaatatgatagcaggtgactcaatggatcttaacgcaggctctgatatcatcttagaaatcgtggttgggactacactaccctacaaaatcggcttgt 5872002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 11211684 - 11211752
Alignment:
Q  159 aaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||| || ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  11211684 aaatcgtggttgggcccaacacaaccccacaaaaccggcttgtgaggtgaggattg-ccccacttataaa 11211752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 200
Target Start/End: Complemental strand, 28080794 - 28080701
Alignment:
Q  108 ttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgt 200  Q
    ||||||| ||||| |||||| |||||| ||||  |||||||| || ||||||||||||||||||  |||| | ||||||||| ||||| |||||    
T  28080794 ttgatagcaggtggcccaatagatcttgaagaggctctgatatcatcttagaaatcgtggttggatctaacataaccccacaaaaccgacttgt 28080701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 36206064 - 36206137
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||| |||||| ||||||||| | ||||||||||| |||||| ||||| | |||| ||||||    
T  36206064 ttagaaatcgtggttgagcctaatacaaccccataaaaccggcttgtgaggtgaagattgcctccacttataaa 36206137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 3393064 - 3392992
Alignment:
Q  156 tagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||| |||||||||||||| ||||||||||| || |||||||| ||||||  ||| ||||||| ||||||    
T  3393064 tagaaatggtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgagaattttccccacttataaa 3392992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 5871751 - 5871835
Alignment:
Q  94 ccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaa-ctctgataccaacttagaaatcgtggttgggcctaa 177  Q
    |||||||  ||||| |||||| ||||||| ||||||||||||| | |  |||||||| || ||||||||||||||||||| ||||    
T  5871751 ccgatagcaaaaatatgatagtaggtgactcaatggatcttaacggaggctctgatatcatcttagaaatcgtggttgggactaa 5871835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 4268139 - 4268064
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaa-ccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||| ||||||||||||| ||||||||| | || ||||||| | |||||||||||| |||||| ||||||    
T  4268139 cttagaaatcttggttgggcctaacacaaccccaaaaaaaccggcttttgaggtgatgattgcccccacttataaa 4268064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 32278884 - 32278959
Alignment:
Q  153 acttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||| ||||| ||||||| |||||| |||||| |||| ||||||||| | |||||| |||||||||||| ||||||    
T  32278884 acttcgaaatggtggttgagcctaacacaacctcacaaaaccggcttatgaggtgacgattgtccccacttataaa 32278959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 32474584 - 32474517
Alignment:
Q  154 cttagaaatcgtggttgggcctaaa-caaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    ||||||||| ||||||||||||||  ||| |||||| ||||||||||| |||||| ||||| ||||||    
T  32474584 cttagaaattgtggttgggcctaacgcaaacccacaaaaccggcttgtgaggtgaggattgcccccac 32474517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 36993258 - 36993325
Alignment:
Q  104 aaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    |||| |||||| | ||| ||||||||||||| ||||  ||||||||||| |||||||||| |||||||    
T  36993258 aaatctgatagcacgtggcccaatggatcttgaagaggctctgataccatcttagaaatcatggttgg 36993325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 1793837 - 1793763
Alignment:
Q  147 ataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    |||||| ||| ||||||||||||||||||   ||||||||||| |||| |||||| |||||| ||||| ||||||    
T  1793837 ataccatcttcgaaatcgtggttgggccttgcacaaccccacaaaacctgcttgtgaggtgaggattgcccccac 1793763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 6634939 - 6634865
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||| ||||||||||||| ||||||||||| |||  |||| | |||||| ||||| |||||| ||||||    
T  6634939 cttagaaatcatggttgggcctaacacaaccccacaaaactagcttatgaggtgaggattgcccccacttataaa 6634865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 21861569 - 21861531
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacattgt 73  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  21861569 ttgtaaggtgaggattgcccccacttataaacacattgt 21861531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 177
Target Start/End: Complemental strand, 22574764 - 22574662
Alignment:
Q  75 gacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcc 174  Q
    |||||||||| || |||| |||||||   |||  |||||| ||||| |||||||||||||  ||| ||||| |||||| | ||||||| ||||||| |||    
T  22574764 gacataaatggtgggtggtccgatagctgaaacctgatagcaggtggcccaatggatcttggagagactcttataccatcatagaaattgtggttgagcc 22574665  T
Q  175 taa 177  Q
    |||    
T  22574664 taa 22574662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 29469645 - 29469607
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacattgt 73  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  29469645 ttgtaaggtgaggattgcccccacttataaacacattgt 29469607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 29469880 - 29469842
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacattgt 73  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  29469880 ttgtaaggtgaggattgcccccacttataaacacattgt 29469842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 36276991 - 36277065
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||| ||||||| |||| |||| | |||| |||||| ||||||  ||||||||||| ||||||    
T  36276991 cttagaaatcgtggttaggcctaacacaatcccataaaacctgcttgtgaggtgagaattgtccccacttataaa 36277065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 207
Target Start/End: Original strand, 36993074 - 36993128
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    |||||||||| ||||||||||||| ||||||||||| |||| |||||| ||||||    
T  36993074 cttagaaatcatggttgggcctaacacaaccccacaaaaccagcttgtgaggtga 36993128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 40746361 - 40746275
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||| ||||||  |||||||| |||||||||||||| ||||||||||| || |||||| | |||||| ||||| || ||| ||||||    
T  40746361 ctctaataccatattagaaattgtggttgggcctaacacaaccccacaaaatcggcttatgaggtgaggattgccctcacttataaa 40746275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 43085537 - 43085611
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||| || ||| ||||||||||| ||||  ||||| |||||| ||||| |||||| ||||||    
T  43085537 cttagaaatcgtggttgagcttaacacaaccccacaaaaccaacttgtgaggtgaggattgcccccacttataaa 43085611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 2938026 - 2937977
Alignment:
Q  178 acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||| |||||||||||||||||| ||||||  |||||| |||||||||||    
T  2938026 acaatcccacacaaccggcttgtgaggtgaatattgtctccacatataaa 2937977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 31257032 - 31257105
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||| | |||| ||||||||||| ||| || |||| |||||| ||||| |||||| ||||||    
T  31257032 ttagaaatcgtggttgagtctaacacaaccccacaaaactggtttgtgaggtgaagattgcccccacttataaa 31257105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 32292610 - 32292549
Alignment:
Q  146 gataccaacttagaaatcgtggttgggcctaaacaaccccacacaaccggcttgtaaggtga 207  Q
    ||||||| ||||||| |  |||||||||||| ||||||||||| | ||||||||| ||||||    
T  32292610 gataccatcttagaatttttggttgggcctacacaaccccacaaatccggcttgtgaggtga 32292549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 32879614 - 32879679
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccc 218  Q
    ||||||| |||| ||||||||||| |||||||| || ||||||||||| |||||| ||||| ||||    
T  32879614 cttagaagtcgtcgttgggcctaacacaaccccgcaaaaccggcttgtgaggtgaggattgccccc 32879679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 43688208 - 43688241
Alignment:
Q  40 aggtaaggattgccctcacttataaacacattgt 73  Q
    ||||||||||||||| ||||||||||||||||||    
T  43688208 aggtaaggattgcccccacttataaacacattgt 43688241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 4e-31; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 13353367 - 13353211
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||||||||||   |||  |||||  ||||| |||||||||||||  |||  ||||||||||| ||||||||| ||||||||    
T  13353367 gtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgg 13353268  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| ||||||||||| |||||||||||||||||| ||||| |||||| ||||||    
T  13353267 gcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaa 13353211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 33796492 - 33796336
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||||||||||   |||  |||||  ||||| |||||||||||||  |||  ||||||||||| ||||||||| ||||||||    
T  33796492 gtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgg 33796393  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| ||||||||||| |||||||||||||||||| ||||| |||||| ||||||    
T  33796392 gcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaa 33796336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 227
Target Start/End: Complemental strand, 33494701 - 33494549
Alignment:
Q  76 acataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcct 175  Q
    ||||||| | || |||||||||||||  |||  |||||| ||||||||||||||||||  ||||   |||||||||| ||||||||| ||||||||||||    
T  33494701 acataaacggtgggtggcccgatagtggaaacctgatagcaggtgacccaatggatctcgaagaggttctgataccatcttagaaatggtggttgggcct 33494602  T
Q  176 aa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    || ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  33494601 aacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 33494549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 6542861 - 6543017
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||| |||||||    |||  |||||| | ||||||||||||||||| ||||  ||||||||||| ||| ||||||||||||||    
T  6542861 gtggacataaatggtgggtgacccgataacggaaacctgatagcaagtgacccaatggatcttgaagaggctctgataccatctttgaaatcgtggttgg 6542960  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    | |||| ||||||||||| ||||||||| | |||||||||||| |||||| ||||||    
T  6542961 gtctaacacaaccccacaaaaccggcttctgaggtgatgattgcccccacttataaa 6543017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 12330097 - 12330253
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || |||||||||| |   |||  |||||| ||||| |||||||||||||  |||  |||||||||||  |||||||||||||||||    
T  12330097 gtggacataaatggtgggtggcccgatggcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatattagaaatcgtggttgg 12330196  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| |||||| |||| ||||||||||| |||||| | ||| |||||| ||||||    
T  12330197 gcctaacacaacctcacaaaaccggcttgtgaggtgagggttgcccccacttataaa 12330253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 4868801 - 4868887
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  4868801 ctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 4868887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 8026485 - 8026399
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  8026485 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 8026399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 9705116 - 9705030
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||||||| ||||| ||||| |||||||||||| |||||| ||||||    
T  9705116 ctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgatgattgcccccacttataaa 9705030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 4868577 - 4868651
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  4868577 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 4868651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 19712812 - 19712724
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa---acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||| ||||||||| ||||||||||||||   ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  19712812 ctctgataccatcttagaaatggtggttgggcctaacacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 19712724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 30256908 - 30256823
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  30256908 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattg-ccccacttataaa 30256823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 6623410 - 6623477
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||||||||||||| ||||| ||||||    
T  6623410 cttagaaatcgtggttggacctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccac 6623477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 9705338 - 9705264
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  9705338 cttagaaatcgtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 9705264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 11721989 - 11721915
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| | |||||| ||||| |||||| ||||||    
T  11721989 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgcccccacttataaa 11721915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 24554232 - 24554126
Alignment:
Q  123 ccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccaca 221  Q
    |||||||||||| |||| ||||||||||||  ||||||||  |||||| | |||| ||||| ||||| ||||||||||| |||||| ||||| ||||||     
T  24554232 ccaatggatcttgaagacactctgataccatgttagaaattatggttgagactaacacaactccacaaaaccggcttgtgaggtgaagattgcccccact 24554133  T
Q  222 tataaat 228  Q
    |||||||    
T  24554132 tataaat 24554126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 30256674 - 30256596
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccca 219  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| |||| || ||| ||||| |||||    
T  30256674 ctctgataccaccttagaaatcgtggttgggcctaacacaaccccacaaaaccggtttgtgagttgaggattgccccca 30256596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 8026687 - 8026622
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccca 219  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||    
T  8026687 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccccca 8026622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 227
Target Start/End: Original strand, 8001504 - 8001624
Alignment:
Q  109 tgataggaggtgacccaatggatcttaaagaa-actctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtg 206  Q
    |||||| ||||| ||||| ||||||| ||| | |||||||||||| ||||||||| |||||||||||||| ||||||| ||| || || ||| | |||||    
T  8001504 tgatagcaggtggcccaacggatctttaaggagactctgataccatcttagaaattgtggttgggcctaacacaacccaacaaaatcgacttatgaggtg 8001603  T
Q  207 atgattgtccccacatataaa 227  Q
    | ||||| |||||| ||||||    
T  8001604 aagattgcccccacttataaa 8001624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 8566960 - 8567023
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccc 217  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||| |||||| |||||||||    
T  8566960 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggtttgtgaggtgaggattgtccc 8567023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 21690815 - 21690732
Alignment:
Q  145 tgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||  |||||||||||||||| |||||| ||||||||||| || |||||||| |||||| ||||| |||||| ||||||    
T  21690815 tgataccatattagaaatcgtggttgagcctaacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaa 21690732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 177
Target Start/End: Complemental strand, 32290896 - 32290789
Alignment:
Q  70 ttgtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggtt 169  Q
    ||||||||||||||| || ||||||||||||  ||||| |||||| ||||| ||| |||||| ||  |||  |||| |||||| |||||||||||| |||    
T  32290896 ttgtggacataaatggtgggtggcccgatagcgaaaatctgatagtaggtggcccgatggatattggagatgctctaataccatcttagaaatcgttgtt 32290797  T
Q  170 gggcctaa 177  Q
     |||||||    
T  32290796 tggcctaa 32290789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 25065094 - 25065168
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||| ||||| ||| || ||||||    
T  25065094 cttagaaatcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccctacttataaa 25065168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 27653313 - 27653227
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  ||||||||||||||||||||||| |||| |||||| ||||| ||||| |||||| ||||  |||||| ||||||    
T  27653313 ctctgataccatattagaaatcgtggttgggcctaacacaatcccacaaaaccgacttgtgaggtgaggatttcccccacttataaa 27653227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 27656541 - 27656468
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||| |||||| ||||  |||||| ||||||    
T  27656541 ttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaa 27656468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 27772797 - 27772724
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  27772797 ttagaaatcgtggttggacctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 27772724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 17147660 - 17147735
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    ||||||||| |||||||| ||||| | ||||||||| ||||||||||| |||||| ||||| |||||| |||||||    
T  17147660 cttagaaatggtggttggacctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaat 17147735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 3921724 - 3921627
Alignment:
Q  71 tgtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggtt 169  Q
    ||||||||||||||||| | ||||| ||||   ||| ||||||| |||||| |||||||||||| ||||  |||||||||||  ||||||||| |||||    
T  3921724 tgtggacataaatgatgggcggccc-atagcggaaacttgatagcaggtgatccaatggatcttgaagaggctctgataccatattagaaatcatggtt 3921627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 5572604 - 5572689
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  |||||||||||||||||||| || | ||||||||| ||||||||||| |||||| ||| | |||||| ||||||    
T  5572604 ctctgataccatattagaaatcgtggttgggccgaacaaaaccccaca-aaccggcttgtgaggtgaggatggcccccacttataaa 5572689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 19639113 - 19639187
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||| ||||| ||| ||||||  |||||| |||| |||||| |||||||||||| ||||||    
T  19639113 cttagaaatcgtggttggacctaacacagccccactaaaccggtttgtgaggtgaggattgtccccacttataaa 19639187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 19713036 - 19712962
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| |||||||||||||| |||| |||||| ||||||||||| ||||||  |||| |||||| ||||||    
T  19713036 cttagaaatggtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgagaattgcccccacttataaa 19712962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 12330292 - 12330364
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||| || ||| ||||| |||||| ||||||    
T  12330292 ttagaaatcgtggttgggcctaacacaacctcacaaaaccggcttgtgagatgaggattg-ccccacttataaa 12330364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 15082133 - 15082198
Alignment:
Q  143 tctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    ||||||||||  |||||||||||| |||||||||| |||| |||||| ||||||||||| ||||||    
T  15082133 tctgataccatattagaaatcgtgtttgggcctaacacaatcccacaaaaccggcttgtgaggtga 15082198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 20373667 - 20373595
Alignment:
Q  141 actctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    |||||||||||| |||| ||||||||||||||||||| ||||||||||| ||  ||||||| |||||| |||||    
T  20373667 actctgataccatcttataaatcgtggttgggcctaacacaaccccaca-aaatggcttgtgaggtgaggattg 20373595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 5572386 - 5572438
Alignment:
Q  156 tagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    |||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||    
T  5572386 tagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgtgaggtga 5572438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 7915933 - 7915870
Alignment:
Q  154 cttagaaatcgtggttgggcctaaacaaccccacacaaccggcttgtaaggtgatgattgtcccc 218  Q
    ||||||||||||||||||| |||| |||||||||| || |||||||| |||||| ||||| ||||    
T  7915933 cttagaaatcgtggttgggtctaa-caaccccacaaaatcggcttgtgaggtgaggattgccccc 7915870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 28867972 - 28868032
Alignment:
Q  169 tgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    ||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| |||||||    
T  28867972 tgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaat 28868032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 33631723 - 33631878
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||| ||||||||   |||  |||||  |||||||||||| ||||||  |||  |||||||| || |||| ||||| |||||||    
T  33631723 gtggacataaatggtgggtgtcccgatagcagaaacctgatatcaggtgacccaatagatcttggagatgctctgatatcatcttaaaaatcatggttgg 33631822  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
     |||||  |||||||||| |||||| || | |||||| |||||| ||||| ||||||    
T  33631823 acctaactcaaccccacaaaaccgg-ttatgaggtgaggattgttcccacttataaa 33631878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 3680180 - 3680061
Alignment:
Q  70 ttgtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggtt 169  Q
    ||||||||||||||| ||  || ||||||||   |||  | |||| ||||||||| |||||| ||  |||   |||||||||| ||||||||| ||||||    
T  3680180 ttgtggacataaatggtggatgacccgatagcggaaacctaatagcaggtgacccgatggattttggagagggtctgataccatcttagaaattgtggtt 3680081  T
Q  170 gggcctaa-acaaccccaca 188  Q
    |||||||| |||||||||||    
T  3680080 gggcctaacacaaccccaca 3680061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 216
Target Start/End: Original strand, 5648672 - 5648735
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcc 216  Q
    |||||||||  ||||||| ||||| |||||| |||| ||||||||||| |||||||||||||||    
T  5648672 cttagaaattatggttggacctaacacaacctcacaaaaccggcttgtgaggtgatgattgtcc 5648735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 6054487 - 6054412
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    ||||||||||||||||||| |||| ||||||| ||| || ||| |||| |||||| ||||| |||||| |||||||    
T  6054487 cttagaaatcgtggttgggtctaacacaaccctacaaaatcggtttgtgaggtgaggattgcccccacttataaat 6054412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 13353241 - 13353203
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacattgt 73  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  13353241 ttgtaaggtgaggattgcccccacttataaacacattgt 13353203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 13741000 - 13740926
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||| | |||| |||||  ||||| ||||||    
T  13741000 cttagaaattgtggttgggcctaacacaaccccacaaaaccgacttgtgaagtgaggattgctcccacttataaa 13740926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 13746500 - 13746426
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||| | |||| |||||  ||||| ||||||    
T  13746500 cttagaaattgtggttgggcctaacacaaccccacaaaaccgacttgtgaagtgaggattgctcccacttataaa 13746426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 31961218 - 31961180
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacattgt 73  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  31961218 ttgtgaggtaaggattgcccccacttataaacacattgt 31961180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 33796366 - 33796328
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacattgt 73  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  33796366 ttgtaaggtgaggattgcccccacttataaacacattgt 33796328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 12329949 - 12330018
Alignment:
Q  159 aaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||| |||||| |||| || | |||||| |||||| ||||| |||||| ||||||    
T  12329949 aaatcgtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgcccccacttataaa 12330018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 73
Target Start/End: Complemental strand, 4906836 - 4906808
Alignment:
Q  45 aggattgccctcacttataaacacattgt 73  Q
    |||||||||||||||||||||||||||||    
T  4906836 aggattgccctcacttataaacacattgt 4906808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 6542709 - 6542769
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    |||||||||||||||||| | ||| ||||||| ||| |||||| |||| ||||||||||||    
T  6542709 cttagaaatcgtggttggacttaacacaaccctacaaaaccggtttgtgaggtgatgattg 6542769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 7638634 - 7638670
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacatt 71  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  7638634 ttgtaaggtgaggattgcccccacttataaacacatt 7638670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 12885140 - 12885076
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccc 218  Q
    ||||||||||||||| | ||||| ||||||||||| || | ||| ||||||||||||||| ||||    
T  12885140 ttagaaatcgtggttagacctaacacaaccccacaaaatcagctcgtaaggtgatgattgccccc 12885076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 18333617 - 18333758
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||||||||||  ||||  |||||| ||||| ||| ||||||||| ||||  ||||||||||| ||||||| ||||||||||    
T  18333617 gtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggtggcccgatggatcttgaagaggctctgataccatcttagaattcgtggttgg 18333716  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgatt 212  Q
    |||||| ||||||||||| ||||||||||| |||||| ||||    
T  18333717 gcctaacacaaccccacaaaaccggcttgtgaggtgacgatt 18333758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 227
Target Start/End: Complemental strand, 15480487 - 15480332
Alignment:
Q  73 tggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttggg 172  Q
    |||||||||||| || ||||||| ||||   |||  |||||| ||||| ||||||||||||| ||||  ||||||||||| |||||||||||||||||||    
T  15480487 tggacataaatggtgggtggcccaatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttggg 15480388  T
Q  173 cctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||| | ||||||||| |||| |||||| |||||| ||||| |||||| ||||||    
T  15480387 cctaacagaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaa 15480332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 41666910 - 41667067
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaa-ctctgataccaacttagaaatcgtggttg 170  Q
    ||||||||||||| || |||||||||||    |||  |||||| ||||| ||||| |||||||  || |  ||||||||||| |||||||||||||||||    
T  41666910 gtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaatcgtggttg 41667009  T
Q  171 ggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  41667010 ggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 41667067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 109 - 227
Target Start/End: Complemental strand, 9368724 - 9368605
Alignment:
Q  109 tgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    |||||| ||||| ||||||||||||| ||||  ||||||||||| |||||||||  ||||||||||||| ||||||||||| ||||||||||| ||||||    
T  9368724 tgatagcaggtggcccaatggatcttgaagaggctctgataccaccttagaaattatggttgggcctaacacaaccccacaaaaccggcttgtgaggtga 9368625  T
Q  208 tgattgtccccacatataaa 227  Q
     ||||| | |||| ||||||    
T  9368624 ggattgcctccacttataaa 9368605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 109 - 227
Target Start/End: Complemental strand, 24531728 - 24531609
Alignment:
Q  109 tgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    |||||| ||||| ||||||||||| || |||  ||||||||||| |||||||||||||||||||| ||| ||||||||||| || |||||||| ||||||    
T  24531728 tgatagcaggtggcccaatggatcatagagaggctctgataccatcttagaaatcgtggttgggcataacacaaccccacaaaatcggcttgtgaggtga 24531629  T
Q  208 tgattgtccccacatataaa 227  Q
     ||||| |||||| ||||||    
T  24531628 ggattgcccccacttataaa 24531609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 2063698 - 2063807
Alignment:
Q  118 gtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcc 216  Q
    |||| |||||||||||| ||||  ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||| ||||| | |||| ||||| ||    
T  2063698 gtgatccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgtga-gtgaggattgccc 2063796  T
Q  217 ccacatataaa 227  Q
    |||| ||||||    
T  2063797 ccacttataaa 2063807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 24528636 - 24528550
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  24528636 ctctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 24528550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 220
Target Start/End: Original strand, 25258219 - 25258368
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||  || |||| |||||||   |||  |||||| ||||| |||||||||||||  |||| ||||||||||| |||||||||||||||||     
T  25258219 gtggacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttggagaagctctgataccatcttagaaatcgtggttga 25258318  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    |  ||| ||||||||||| ||||| ||||| |||||| ||||| ||||||    
T  25258319 gtttaacacaaccccacaaaaccgacttgtgaggtgaggattgcccccac 25258368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 220
Target Start/End: Original strand, 25322009 - 25322158
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||  || |||| |||||||   |||  |||||| ||||| |||||||||||||  |||| ||||||||||| |||||||||||||||||     
T  25322009 gtggacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttggagaagctctgataccatcttagaaatcgtggttga 25322108  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    |  ||| ||||||||||| ||||| ||||| |||||| ||||| ||||||    
T  25322109 gtttaacacaaccccacaaaaccgacttgtgaggtgaggattgcccccac 25322158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 228
Target Start/End: Original strand, 24346654 - 24346812
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaa-ctctgataccaacttagaaatcgtggttg 170  Q
    ||||||||||||| || |||||||||||    |||  |||||| ||||| |||||||||||||  || |  ||||||||||| |||| ||||||||||||    
T  24346654 gtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaatggatcttggaggaggctctgataccatcttaaaaatcgtggttg 24346753  T
Q  171 ggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    || |||| ||||||||||| ||||||||||| ||||||  |||  |||||| |||||||    
T  24346754 ggtctaacacaaccccacaaaaccggcttgtgaggtgagtattacccccacttataaat 24346812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 41666757 - 41666831
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  41666757 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 41666831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 177
Target Start/End: Original strand, 95419 - 95524
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || |||||||||| |   |||  |||||| ||||| |||||||||||||  |||  ||||||||||| ||||||||||||||||||    
T  95419 gtggacataaatggtgggtggcccgatggcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgg 95518  T
Q  172 gcctaa 177  Q
    ||||||    
T  95519 gcctaa 95524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 6413575 - 6413731
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||| |||||||  | |  |||||| ||||| ||||||||||||| ||||  || ||||||||  ||||||||||| |||||    
T  6413575 gtggacataaatggtgggtggctcgatagtggatacctgatagcaggtggcccaatggatcttgaagaggctttgataccatattagaaatcgttgttgg 6413674  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |  ||| ||||||||| | ||||||||| | |||||| ||||||||| || ||||||    
T  6413675 gtttaacacaaccccaaaaaaccggcttatgaggtgaggattgtccctacttataaa 6413731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 25258094 - 25258161
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| ||||||    
T  25258094 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccac 25258161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 25321884 - 25321951
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| ||||||    
T  25321884 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccac 25321951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 8098413 - 8098328
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  8098413 ctctgataccatattagaaatcgtggttgggcttaacacaaccccacaaaaccggcttgtgaggtgaggattg-ccccacttataaa 8098328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 186
Target Start/End: Original strand, 17150387 - 17150501
Alignment:
Q  73 tggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttggg 172  Q
    |||||||||||| || ||||||||||||   |||  |||||| ||||| ||||||||||||| ||||  ||||||||||| |||| ||||||| |||| |    
T  17150387 tggacataaatggtgggtggcccgatagcggaaacctgatagtaggtggcccaatggatcttgaagaggctctgataccatcttaaaaatcgtagttgag 17150486  T
Q  173 cctaa-acaacccca 186  Q
    ||||| |||||||||    
T  17150487 cctaacacaacccca 17150501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 19705987 - 19705913
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||||| |||||||| ||||| |||||| ||||||    
T  19705987 cttagaaatcgtggttgggcctaacacaactccacaaaaccggcttataaggtgaggattgcccccacttataaa 19705913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 21209909 - 21209995
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||| ||||||  ||||||||||||||||||| ||| ||||||||||| ||||||||||| ||||||  ||||||||||| ||||||    
T  21209909 ctctaataccatattagaaatcgtggttgggcttaacacaaccccacaaaaccggcttgtgaggtgagaattgtccccacttataaa 21209995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 8081101 - 8081178
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccc 218  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||||| ||||||||||| || ||| ||||| ||||    
T  8081101 ctctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgccccc 8081178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 228
Target Start/End: Original strand, 24270023 - 24270180
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaa-ctctgataccaacttagaaatcgtggttg 170  Q
    ||||||||||||| || |||||||||||    |||  |||||| ||||| |||||||||||||  || |  ||||||||||| |||| ||||||||||||    
T  24270023 gtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaatggatcttggaggaggctctgataccatcttaaaaatcgtggttg 24270122  T
Q  171 ggcctaaacaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    | |  | ||||||||||| ||||||||||| ||||||  |||  |||||| |||||||    
T  24270123 gtctaacacaaccccacaaaaccggcttgtgaggtgagtattacccccacttataaat 24270180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 26137262 - 26137419
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaa-ctctgataccaacttagaaatcgtggttg 170  Q
    |||||||||||||||| |||||||||| || ||||  |||||| ||||| |||||   |||||  || |  ||||||||||| |||||||||||||||||    
T  26137262 gtggacataaatgatgggtggcccgatggtgaaaacctgatagcaggtggcccaacaaatcttggagtaggctctgataccaccttagaaatcgtggttg 26137361  T
Q  171 ggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||| | || |||||| ||||  ||||| || ||| ||||||| |||| ||||||    
T  26137362 ggcctaacataatcccacaaaaccaacttgtgagatgaggattgtcgccacttataaa 26137419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 27132994 - 27133067
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| || ||| ||||||    
T  27132994 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataaa 27133067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 6919347 - 6919502
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| ||||||| |||| ||   |||  |||||| || |||| ||||||||||| ||||  || |||||||| |||| ||||||||||||     
T  6919347 gtggacataaatggtgagtggtccgaaagcggaaacctgatagcagatgactcaatggatcttgaagaggctttgataccatcttaaaaatcgtggttga 6919446  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| |||||| |||| || | |||||| ||||||  ||||||||||| ||||||    
T  6919447 gcctaacacaacctcaca-aaactgcttgtgaggtgagaattgtccccacttataaa 6919502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 228
Target Start/End: Complemental strand, 13296764 - 13296682
Alignment:
Q  146 gataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    ||||||| |||||||||||||||||||||||| |||| |||||| ||| ||||||| |||||| ||||| |||||| |||||||    
T  13296764 gataccatcttagaaatcgtggttgggcctaacacaa-cccacaaaactggcttgtgaggtgaggattgcccccacttataaat 13296682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 95266 - 95340
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||| || ||||||||||||| ||||||||||| ||||||||||| || ||| |||||||||||| ||||||    
T  95266 cttagaattcttggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgtccccacttataaa 95340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 19522182 - 19522104
Alignment:
Q  143 tctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    ||||||||||  |||||||||||||||||| | || ||||||||||| ||||||||||| |||||| ||||| ||||||    
T  19522182 tctgataccatattagaaatcgtggttgggtcaaatacaaccccacaaaaccggcttgtgaggtgaggattgcccccac 19522104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 24487633 - 24487719
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  ||||||||||||||||||| ||| |||||| |||| ||||||||||| |||||| ||||  |||||| ||||||    
T  24487633 ctctgataccatattagaaatcgtggttgggcttaacacaacctcacaaaaccggcttgtgaggtgaggattacccccacttataaa 24487719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 7607677 - 7607604
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| ||||||||||||| ||||| ||||| ||||||||||| |||||| ||||||| |||| ||||||    
T  7607677 ttagaaatcatggttgggcctaacacaactccacaaaaccggcttgtgaggtgaagattgtctccacttataaa 7607604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 43117813 - 43117696
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    |||||||||||||||| |||| |||||||   |||  |||||| ||||| |||||| ||||||  | |  ||||||||| | |||||||||||| |||||    
T  43117813 gtggacataaatgatgggtggtccgatagcggaaacctgatagcaggtggcccaatagatcttggaaaggctctgatactatcttagaaatcgttgttgg 43117714  T
Q  172 gcctaa-acaaccccaca 188  Q
    |||||| |||||||||||    
T  43117713 gcctaacacaaccccaca 43117696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 15480643 - 15480583
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    ||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||| |||||    
T  15480643 cttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattg 15480583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 21306971 - 21306896
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    ||||||||||||||||||| |||| |||| ||||||  |||||||||| |||||| ||||| |||||| |||||||    
T  21306971 cttagaaatcgtggttgggtctaacacaatcccacaataccggcttgtgaggtgaggattgcccccacttataaat 21306896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 21314809 - 21314734
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    ||||||||||||||||||| |||| |||| ||||||  |||||||||| |||||| ||||| |||||| |||||||    
T  21314809 cttagaaatcgtggttgggtctaacacaatcccacaataccggcttgtgaggtgaggattgcccccacttataaat 21314734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 18333465 - 18333539
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||| | |||||||||||||| ||||||||||| ||||||||||| |||||| ||||  |||||| ||||||    
T  18333465 cttagaatttgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaa 18333539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 37782038 - 37782124
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaaa-caaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  ||||| || ||||||||||||||  |||| ||||| |||| |||||| |||||||||||| |||||| ||||||    
T  37782038 ctctgataccatgttagacatggtggttgggcctaactcaactccacaaaaccagcttgtgaggtgatgattgcccccacttataaa 37782124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 1564555 - 1564640
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataa 226  Q
    |||||||| || ||||||||||||||||| |||||| ||||||||||| ||| | ||||| | |||| ||||| |||||| |||||    
T  1564555 ctctgatatcatcttagaaatcgtggttgagcctaacacaaccccacaaaactgtcttgtgatgtgaggattgcccccacttataa 1564640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 8287884 - 8287812
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||| |||||  ||||| |||||| ||||||    
T  8287884 ttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtggggattg-ccccacttataaa 8287812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 28510175 - 28510130
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggctt 198  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||    
T  28510175 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggctt 28510130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 29909722 - 29909795
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||| |||||||||||||| ||||| ||||| ||||||||||| |||||| ||||| | |||| ||||||    
T  29909722 ttagaaatggtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcctccacttataaa 29909795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 7369798 - 7369734
Alignment:
Q  164 gtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||| || || |||||| ||||||    
T  7369798 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggactgcccccacttataaa 7369734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 16704636 - 16704736
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    |||||||||||||||||||| ||||||||   |||  |||||| ||||  ||||| |||| || ||||| |||||||| ||  ||||||||| |||||||    
T  16704636 gtggacataaatgatgagtgacccgatagctgaaacatgatagcaggtagcccaaaggatattgaagaagctctgatatcattttagaaatcatggttgg 16704735  T
Q  172 g 172  Q
    |    
T  16704736 g 16704736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 60171 - 60097
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| ||| ||||| |||| | ||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  60171 cttagaaattgtgattgggtctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 60097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 9368914 - 9368840
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| |||||||||||||| ||||||||||| || |||||||| | ||||  |||| |||||| ||||||    
T  9368914 cttagaaattgtggttgggcctaacacaaccccacataatcggcttgtgaagtgagaattgcccccacttataaa 9368840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 13296976 - 13296902
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||| |||| |||| |||||| |||||| |||| |||||| | ||| |||||| ||||||    
T  13296976 cttagaaatcgtggttgggtctaacacaatcccacaaaaccggtttgtgaggtgagggttgcccccacttataaa 13296902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 17352435 - 17352509
Alignment:
Q  154 cttagaaatcgtggttgggcctaaa-caaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||| | ||||||| ||||||  ||||| |||| ||||||||||| |||||||||||| |||||| ||||||    
T  17352435 cttagaagtggtggttgagcctaacgcaacctcacaaaaccggcttgtgaggtgatgattgcccccacttataaa 17352509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 19522403 - 19522330
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    |||||||||||||||| | |||| ||||||||||| || |||||||| ||||||| |||| |||||| |||||||    
T  19522403 ttagaaatcgtggttgtgtctaacacaaccccacaaaatcggcttgtgaggtgattattg-ccccacttataaat 19522330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 24346501 - 24346575
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| ||||||| |||||| ||||||||| | ||||||||||| |||||| ||||  |||||| ||||||    
T  24346501 cttagaaattgtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggattacccccacttataaa 24346575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 24647778 - 24647720
Alignment:
Q  156 tagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    |||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||| |||||    
T  24647778 tagaaatcgtggttggacctaacacaactccacaaaaccggcttgtgaggtgaggattg 24647720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 32908718 - 32908792
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||| |||| | |||||| || |||||| |||| |||||||||||| | |||| ||||||    
T  32908718 cttagaaatcgtggttgggtctaacataacccctcaaaaccggtttgtgaggtgatgattgcctccacttataaa 32908792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 38977017 - 38976943
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||| |||||| ||| | ||||| |||||| |||| |||||| ||||||||| || ||||||    
T  38977017 cttagaaatcgtggttgtgcctaacacacctccacaaaaccggtttgtgaggtgaggattgtcccaacttataaa 38976943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 20225155 - 20225062
Alignment:
Q  124 caatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcc 216  Q
    ||||||||||| ||||  || ||||| ||  ||||||||||||||||  ||||| ||||||||||| || || ||||| |||||| ||||||||    
T  20225155 caatggatcttgaagaggctatgatatcattttagaaatcgtggttgaacctaacacaaccccacaaaatcgacttgtgaggtgaggattgtcc 20225062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 21209709 - 21209762
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    |||||||||||||||| || ||| ||||||||||| ||||||||||| ||||||    
T  21209709 ttagaaatcgtggttgtgcttaacacaaccccacaaaaccggcttgtgaggtga 21209762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 42295662 - 42295589
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||| || ||||||||||| ||||| ||||| ||||||||||| |||||| |||||  ||||| ||||||    
T  42295662 ttagaaattgtcgttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgctcccacttataaa 42295589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 15439071 - 15438999
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatata 225  Q
    |||| ||||||||||| ||||||| ||||||||| | ||| | ||||| |||||||||||| |||||| ||||    
T  15439071 cttataaatcgtggttaggcctaacacaaccccataaaactgacttgtgaggtgatgattgcccccacttata 15438999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 17352642 - 17352742
Alignment:
Q  128 ggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataa 226  Q
    ||||||| ||||  ||||||||||| ||||||||| |||||||| ||||| | |||||| || ||  ||||||| |||||| ||||  |||||| |||||    
T  17352642 ggatcttgaagaggctctgataccatcttagaaatggtggttggacctaacataaccccgcaaaattggcttgtgaggtgaagattacccccacttataa 17352741  T
Q  227 a 227  Q
    |    
T  17352742 a 17352742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 194
Target Start/End: Original strand, 32908873 - 32908993
Alignment:
Q  75 gacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcc 174  Q
    |||||||||| || ||| ||||||||   |||  |||||| || || ||||||||||||| ||||  |||| ||| || ||||||||| ||||||| | |    
T  32908873 gacataaatggtgggtgacccgatagcagaaacctgatagcagatggcccaatggatcttgaagaggctctaatatcatcttagaaattgtggttgagtc 32908972  T
Q  175 taa-acaaccccacacaaccg 194  Q
    ||| ||||||||||| |||||    
T  32908973 taacacaaccccacaaaaccg 32908993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 228
Target Start/End: Original strand, 22231226 - 22231383
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| |  ||||||||||||   |||  |||||| ||||| |||||||||| ||  |||  ||||||||||| ||||||||||||||||||    
T  22231226 gtggacataaatggtaggtggcccgatagcggaaacctgatagcaggtggcccaatggattttggagaggctctgataccatcttagaaatcgtggttgg 22231325  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    |||||| ||||||||||| ||||||||||| |||||| ||||| |||||| |||||||    
T  22231326 gcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaat 22231383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 35819046 - 35819202
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||| ||||||||   |||  |||||| ||||| |||||||||||||| ||| |||||||| ||| |||| |||||||||||||    
T  35819046 gtggacataaatggtgggtgacccgatagcggaaacctgatagcaggtggcccaatggatcttagagagactctgatgccatcttaaaaatcgtggttgg 35819145  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| |||||| |||| ||| ||||||| ||| || ||||| |||||||||||||    
T  35819146 gcctaacacaacctcacaaaactggcttgtgaggcgaggattgcccccacatataaa 35819202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 227
Target Start/End: Original strand, 40717357 - 40717515
Alignment:
Q  70 ttgtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggtt 169  Q
    ||||||||||||||| || |||| |||||||   |||  |||| | ||||| |||||||||| ||  |||  ||||||||||| ||||||||||||||||    
T  40717357 ttgtggacataaatggtgggtggtccgatagcggaaacctgatggcaggtggcccaatggatattggagaggctctgataccatcttagaaatcgtggtt 40717456  T
Q  170 gggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||| ||||||||||| ||||| ||| | |||||| ||||| |||||| ||||||    
T  40717457 gggcctaacacaaccccacaaaaccgacttttgaggtgaggattgcccccacttataaa 40717515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 12869245 - 12869338
Alignment:
Q  136 aagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    |||| |||||||||||| |||||||||||||||||||||||| ||||||||||| ||||| ||| | |||||| |||||||||||| |||||||    
T  12869245 aagagactctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgtcttatgaggtgaggattgtccccacttataaat 12869338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 21646421 - 21646565
Alignment:
Q  73 tggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttggg 172  Q
    |||||||||||| || |||| |||||||| ||||  |||||| ||||||||||||| |||||  ||| ||||| |||||| |||| ||||||||||||||    
T  21646421 tggacataaatggtg-gtggtccgatagtgaaaacatgatagcaggtgacccaatgaatcttggagagactctaataccatcttaaaaatcgtggttggg 21646519  T
Q  173 cctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccc 217  Q
    ||||| | | ||||| | ||||| |||||||||||| |||||||||    
T  21646520 cctaatagagccccataaaaccgacttgtaaggtgaggattgtccc 21646565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 215
Target Start/End: Complemental strand, 4645808 - 4645664
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    |||||||||| || || ||||||||||||   |||  |||||| |||||||||||||||||||  |||  ||||||||| | |||| ||||| ||||||     
T  4645808 gtggacataattggtgggtggcccgatagcggaaacctgatagcaggtgacccaatggatctttgagaggctctgatactatcttataaatcatggttga 4645709  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtc 215  Q
    | |||| |||| |||||| ||||||||||||||||||||||||||    
T  4645708 gtctaacacaatcccacaaaaccggcttgtaaggtgatgattgtc 4645664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 35788755 - 35788669
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||| | ||||||||||| |||||| ||||| |||||| ||||||    
T  35788755 ctctgataccatcttagaaatcgtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaa 35788669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 52559663 - 52559577
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| | |||||||||| ||||||||||||| ||||||||||| ||||||||||| |||||||||||| |||||| ||||||    
T  52559663 ctctgatactatcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaa 52559577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 11036703 - 11036820
Alignment:
Q  111 ataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatg 209  Q
    |||| ||||| |||||||||||||| ||   ||||||||||| |||| |||| |||||| ||||||| |||||||||||||| |||||||| |||||| |    
T  11036703 atagtaggtggcccaatggatcttagagtggctctgataccatcttaaaaattgtggttaggcctaacacaaccccacacaatcggcttgtgaggtgagg 11036802  T
Q  210 attgtccccacatataaa 227  Q
    |||| |||||| ||||||    
T  11036803 attgcccccacttataaa 11036820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 227
Target Start/End: Complemental strand, 6218366 - 6218214
Alignment:
Q  76 acataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcct 175  Q
    |||||||||||| ||| || |||||   |||  |||||| |||||| ||||||||||||  |||  ||||||||||| ||||||||||||||||| | ||    
T  6218366 acataaatgatgggtgacctgatagcggaaacctgatagtaggtgatccaatggatcttggagaggctctgataccatcttagaaatcgtggttgtgtct 6218267  T
Q  176 aa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    || ||||| ||||| ||||| ||||| |||||| ||||| |||||| ||||||    
T  6218266 aacacaactccacaaaaccgtcttgtgaggtgaagattgcccccacttataaa 6218214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 14783175 - 14783247
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  14783175 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattg 14783247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 1518260 - 1518174
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||| |||||||||||||||| ||||||| ||||||||||| ||||||||||| || ||| ||||| |||||| ||||||    
T  1518260 ctctgataccatcttagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgagctgaggattgcccccacttataaa 1518174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 21498450 - 21498364
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  ||||||||||||||||||||||| | ||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  21498450 ctctgataccatattagaaatcgtggttgggcctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 21498364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 22231073 - 22231147
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||||| |||||| |||||||||||| ||||||    
T  22231073 cttagaaatcgtggttggacctaatacaaccccacaaaaccggcttgtgaggtgaggattgtccccacttataaa 22231147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 227
Target Start/End: Complemental strand, 17111682 - 17111574
Alignment:
Q  119 tgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccc 217  Q
    ||||| ||||||||||  | | |||||||||||| |||||||||||||||||||||||| ||||||||||| |||| | || |||||||| ||||| |||    
T  17111682 tgacctaatggatcttggaaagactctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccagtttttaaggtgaggattg-ccc 17111584  T
Q  218 cacatataaa 227  Q
    ||| ||||||    
T  17111583 cacttataaa 17111574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 21498878 - 21498805
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  21498878 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 21498805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 37836173 - 37836089
Alignment:
Q  145 tgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    |||||||| ||||||||| |||||| ||||||| ||||||||||| ||||||||||||||| || ||||| |||||| |||||||    
T  37836173 tgataccatcttagaaattgtggttaggcctaacacaaccccacaaaaccggcttgtaaggagaggattgcccccacttataaat 37836089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 50543318 - 50543402
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatata 225  Q
    |||||||| || |||||||||||||||||||||||| ||||||||||| |||||||||||  ||||| ||||| |||||| ||||    
T  50543318 ctctgataacatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgcccccacttata 50543402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 50543555 - 50543639
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatata 225  Q
    |||||||| || |||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||| ||||| |||||| ||||    
T  50543555 ctctgatatcatcttagaaatcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttata 50543639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 200
Target Start/End: Complemental strand, 7926484 - 7926365
Alignment:
Q  82 atgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-aca 180  Q
    |||||| ||||||| |||||  |||  |||||| ||||| |||||||||||||  |||  ||||||||||| ||| |||||| ||||||||||||| |||    
T  7926484 atgatgggtggccctatagtggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttcgaaatcttggttgggcctaacaca 7926385  T
Q  181 accccacacaaccggcttgt 200  Q
     ||||||| |||||||||||    
T  7926384 gccccacaaaaccggcttgt 7926365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 28245679 - 28245782
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||||||||||   |||  |||||| ||||| |||||||||||||  |||  |||||||||||  |||||||||||||||||    
T  28245679 gtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatattagaaatcgtggttgg 28245778  T
Q  172 gcct 175  Q
    ||||    
T  28245779 gcct 28245782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 53559290 - 53559357
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    |||||||||||||||||||||||| ||||||||||| || ||||||||||||||| ||||| ||||||    
T  53559290 cttagaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggattgcccccac 53559357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 9685494 - 9685408
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  ||||||||||||||||||||||| |||||| |||| ||||| ||||| |||||| ||||| |||||| ||||||    
T  9685494 ctctgataccatattagaaatcgtggttgggcctaacacaacctcacaaaaccgacttgtgaggtgaggattggccccacttataaa 9685408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 22827622 - 22827548
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||| ||| ||||||||||| |||||| ||||| |||||| ||||||    
T  22827622 cttagaaatcgtggttgggcctaacacaacccgacaaaaccggcttgtgaggtgaggattgcccccacttataaa 22827548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 22845447 - 22845521
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||  |||||| ||||||    
T  22845447 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaa 22845521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 22863558 - 22863484
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||  ||||| ||||| |||||| ||||||    
T  22863558 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgcccccacttataaa 22863484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 25052948 - 25052862
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||  ||||  |||||| ||||||    
T  25052948 ctctgataccatgttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgcggattacccccacttataaa 25052862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 35609699 - 35609785
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||| |||||||||| |||||||| || | ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  35609699 ctctgataccatcttagaaatcatggttgggtcttacacaaccccacaaaaccggcttgtgaggtgaggattggccccacttataaa 35609785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 35788978 - 35788904
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| || ||| ||||| |||||| ||||||    
T  35788978 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgcccccacttataaa 35788904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 53814917 - 53815003
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||| ||||| ||||| |||||| ||||| |||||| ||||||    
T  53814917 ctctgataccatattagaaatcgtggttgggcttaacacaaccccacaaaaccgacttgtgaggtgaggattgcccccacttataaa 53815003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 53828511 - 53828597
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||||||| || |||||| | |||||| ||||| |||||| ||||||    
T  53828511 ctctgataccatcttagaaattgtggttgggcctaacacaaccccacaaaatcggcttatgaggtgaggattgcccccacttataaa 53828597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 9685715 - 9685642
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||||| |||||| ||||| |||||| ||||||    
T  9685715 ttagaaatcgtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaa 9685642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 28245527 - 28245600
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  28245527 ttagaaatcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 28245600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 53814675 - 53814748
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||| |||||| |||| ||||||| ||||||    
T  53814675 ttagaaatcgtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgaggattatccccacttataaa 53814748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 22445579 - 22445471
Alignment:
Q  111 ataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatg 209  Q
    |||| ||||| | ||||||||||| ||||  ||||||||||| ||||||| | ||||||||| |||| ||||||||||| ||||| |||||| ||||| |    
T  22445579 atagtaggtggctcaatggatcttgaagaggctctgataccatcttagaatttgtggttgggtctaacacaaccccacaaaaccgacttgtagggtgagg 22445480  T
Q  210 attgtcccc 218  Q
    |||| ||||    
T  22445479 attgccccc 22445471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 35796895 - 35797051
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||| ||||||| || ||||||||||||   |||  |||||| ||||   |||||||||||  ||||  ||||||||||| ||||||||| || |||||    
T  35796895 gtggagataaatggtgggtggcccgatagcggaaacctgatagcaggtagtccaatggatctcgaagaggctctgataccatcttagaaatggtagttgg 35796994  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    || ||| ||||||||||| ||| || |||| |||||| ||||| |||||| ||||||    
T  35796995 gcttaacacaaccccacaaaactggtttgtgaggtgaggattgcccccacttataaa 35797051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 12869029 - 12869103
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||| |||  |||||| ||||||||||| ||||||||||| |||||||||||| |||||| ||||||    
T  12869029 cttagaaatcgtagtttagcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaa 12869103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 39902563 - 39902637
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| |||||||||||||| ||||||||||| |||| |||||| |||||| ||||| |||||| ||||||    
T  39902563 cttagaaatggtggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaa 39902637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 20822056 - 20821983
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||| ||||||  |||| |||||| ||||||    
T  20822056 ttagaaatcgtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgagaattgcccccacttataaa 20821983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 40716609 - 40716673
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggt 205  Q
    ||||||||||| |||||||| | ||||||||||||| ||||||||||| | ||||||||||||||    
T  40716609 ctctgataccatcttagaaaccatggttgggcctaacacaaccccacaaatccggcttgtaaggt 40716673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 5846239 - 5846156
Alignment:
Q  145 tgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||  |||||||||||||||| ||||||  |||||||||| ||||||||| | |||||| ||||| |||||| ||||||    
T  5846239 tgataccatattagaaatcgtggttgagcctaacgcaaccccacaaaaccggcttatgaggtgaggattgcccccacttataaa 5846156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 6218523 - 6218449
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||| |||||| ||||  ||| | ||||||||||| |||||||||||| |||||| ||||||    
T  6218523 cttagaaatcgtggttgagcctaacacaattccataaaaccggcttgtgaggtgatgattgcccccacttataaa 6218449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 6666628 - 6666702
Alignment:
Q  147 ataccaacttagaaatcgtggttgggcct-aaacaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    |||||| |||||||||||||||||||||| |||||| |||||| |||||| |||| |||| | ||||| ||||||    
T  6666628 ataccatcttagaaatcgtggttgggcctaaaacaatcccacaaaaccggtttgtgaggtaaggattgcccccac 6666702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 9279299 - 9279237
Alignment:
Q  166 ggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||| ||||||||||| |||||||| || |||||||||||| |||||| ||||||    
T  9279299 ggttgggcctaacacaaccccacaaaaccggctagtgaggtgatgattgcccccacttataaa 9279237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 11036511 - 11036585
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| ||||||||| |||| |||||||| || ||||||||||| |||||||||||| ||| || ||||||    
T  11036511 cttagaaattgtggttgggtctaacacaaccccgcaaaaccggcttgtgaggtgatgattgccccaacttataaa 11036585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 200
Target Start/End: Complemental strand, 4464425 - 4464332
Alignment:
Q  109 tgataggaggtgacccaatggatcttaaagaaa-ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgt 200  Q
    |||||| | ||||||||||||||||| ||| |  ||||||||||| ||||||| ||||||||||| |||| | ||||||||| || ||||||||    
T  4464425 tgatagcatgtgacccaatggatcttgaaggaggctctgataccatcttagaattcgtggttgggtctaacaaaaccccacaaaatcggcttgt 4464332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 54054806 - 54054879
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||||||| ||||||||||| || |||||| | ||||||  |||| |||||| ||||||    
T  54054806 ttagaaatcgtggttgggcctaacacaaccccacaaaaacggcttatgaggtgagaattgcccccacttataaa 54054879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 5398476 - 5398536
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    |||||||||| ||||||| ||||| ||||||||||| ||||||||||| |||||| |||||    
T  5398476 cttagaaatcatggttggacctaacacaaccccacaaaaccggcttgtgaggtgaggattg 5398536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 24513348 - 24513431
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatata 225  Q
    |||||||| ||  |||||||||||| |||||||||| ||||||| ||| ||||||||||| |||||| ||||| |||||| ||||    
T  24513348 ctctgatatcatgttagaaatcgtgattgggcctaacacaaccctaca-aaccggcttgtgaggtgaggattgcccccacttata 24513431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 2463889 - 2463818
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatata 225  Q
    |||||||| |||| ||||||||| ||||||||||| ||||||||||| |||| | ||||| |||||| ||||    
T  2463889 ttagaaatggtggctgggcctaacacaaccccacaaaaccggcttgtgaggtaaggattgcccccacttata 2463818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 40726805 - 40726746
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgatt 212  Q
    |||||||||||||||||||||||| |||| || ||| ||||||||||| |||||| ||||    
T  40726805 cttagaaatcgtggttgggcctaacacaatcctacaaaaccggcttgtgaggtgaggatt 40726746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 400553 - 400639
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  |||||||| ||||||| || ||| |||||| |||| ||||||||||| |||||| ||||  |||||| ||||||    
T  400553 ctctgataccaggttagaaattgtggttgagcttaacacaacctcacaaaaccggcttgtgaggtgaggatttcccccacttataaa 400639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 207
Target Start/End: Original strand, 28073181 - 28073235
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    ||||||||| |||||||||||||| ||||||||||| |||| |||||| ||||||    
T  28073181 cttagaaattgtggttgggcctaacacaaccccacaaaaccagcttgtgaggtga 28073235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 31254451 - 31254489
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacattgt 73  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  31254451 ttgtaaggtgaggattgcccccacttataaacacattgt 31254489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 34358018 - 34358096
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccca 219  Q
    |||||||| || ||||||||||||| ||| |||||| ||||||||||| ||||||||| | | |||| ||||| |||||    
T  34358018 ctctgatatcatcttagaaatcgtgtttgagcctaacacaaccccacaaaaccggcttctgatgtgaggattgccccca 34358096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 35609490 - 35609564
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||  | | ||||||||||| ||||| ||||| |||||| ||||| |||||| ||||||    
T  35609490 cttagaaatcgtggttgggtgttacacaaccccacaaaaccgacttgtgaggtgaggattgcccccacttataaa 35609564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 35796742 - 35796816
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| |||||||| | ||| |||||| |||| ||||||||||| |||||| ||||| |||||| ||||||    
T  35796742 cttagaaatggtggttggacttaacacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaa 35796816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 28246110 - 28246159
Alignment:
Q  178 acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  28246110 acaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 28246159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 177
Target Start/End: Original strand, 30530112 - 30530185
Alignment:
Q  104 aaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa 177  Q
    |||| |||||| ||||| || ||||||||||  |||  ||||||||||| ||||||||| ||||||| ||||||    
T  30530112 aaatctgatagcaggtggcctaatggatcttggagaggctctgataccatcttagaaattgtggttgagcctaa 30530185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 227
Target Start/End: Original strand, 9908781 - 9908905
Alignment:
Q  104 aaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaa 202  Q
    |||| |||||| |||||  ||||| ||||||  ||| |||||||||||| |||||| |||||| || || |||| |||||| |||| ||||| ||||| |    
T  9908781 aaatctgatagcaggtggtccaatagatcttggagagactctgataccatcttagatatcgtgattaggtctaatacaaccacacagaaccgacttgtga 9908880  T
Q  203 ggtgatgattgtccccacatataaa 227  Q
     |||  ||||  |||||||||||||    
T  9908881 tgtggggatttcccccacatataaa 9908905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 10361999 - 10362059
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    ||||||||| || ||||||||||| | |||||||||  ||| |||||||||||||||||||    
T  10361999 cttagaaattgtagttgggcctaacataaccccacaataccagcttgtaaggtgatgattg 10362059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 14419 - 14313
Alignment:
Q  122 cccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    |||||||||||||  |||  ||||||||||| |||||||| ||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||    
T  14419 cccaatggatcttggagaggctctgataccatcttagaaaacgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgtccccac 14320  T
Q  221 atataaa 227  Q
     ||||||    
T  14319 ttataaa 14313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 7e-27; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 75 - 227
Target Start/End: Complemental strand, 4155487 - 4155334
Alignment:
Q  75 gacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcc 174  Q
    |||||||| | || ||||||||||||   |||  |||||| ||||| ||||||| |||||  ||| |||||||||||| |||||||||||||||||||||    
T  4155487 gacataaacggtgggtggcccgatagcggaaacctgatagcaggtggcccaatgaatcttggagagactctgataccatcttagaaatcgtggttgggcc 4155388  T
Q  175 taa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||| ||||||||||| ||||||||| | |||||| ||||| |||||| ||||||    
T  4155387 taacacaaccccacaaaaccggcttttgaggtgaggattgcccccacttataaa 4155334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 227
Target Start/End: Original strand, 20327768 - 20327923
Alignment:
Q  73 tggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttggg 172  Q
    |||||||||||| || ||||||||||||   |||  |||||| ||||| |||||||||| ||| |||  | |||||||||  ||||||||| ||||||||    
T  20327768 tggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggattttagagaggcactgataccatattagaaatcatggttggg 20327867  T
Q  173 cctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  20327868 cctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 20327923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 16926911 - 16927023
Alignment:
Q  116 aggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgt 214  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| || ||| ||||||||||| ||||||||||| || ||| ||||      
T  16926911 aggtgacccaatggatcttgaagagactctgataccatcttagaaatcgtggttgagcttaacacaaccccacaaaaccggcttgtgagatgaggattac 16927010  T
Q  215 ccccacatataaa 227  Q
    |||||| ||||||    
T  16927011 ccccacttataaa 16927023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 117 - 227
Target Start/End: Complemental strand, 54368637 - 54368526
Alignment:
Q  117 ggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtc 215  Q
    |||| ||||||||||||| ||||  ||||||||||| ||||||||||||||||||| |||| ||||||||| | ||||||||||| |||||| ||||| |    
T  54368637 ggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggtctaacacaaccccataaaaccggcttgtgaggtgaggattgcc 54368538  T
Q  216 cccacatataaa 227  Q
    ||||| ||||||    
T  54368537 cccacttataaa 54368526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 109 - 227
Target Start/End: Complemental strand, 54568021 - 54567902
Alignment:
Q  109 tgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    |||||| ||||| | |||||||||||  |||  ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||    
T  54568021 tgatagcaggtggctcaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtga 54567922  T
Q  208 tgattgtccccacatataaa 227  Q
     ||||  |||||| ||||||    
T  54567921 ggatttcccccacttataaa 54567902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 1723064 - 1723150
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  1723064 ctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 1723150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 11589881 - 11589795
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  11589881 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 11589795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 200
Target Start/End: Original strand, 20303303 - 20303432
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || |||| ||||||||  |||  |||||| ||||| |||||||||| ||| |||  |||||||||||  |||||||| ||||||||    
T  20303303 gtggacataaatggtgggtggaccgatagtggaaacctgatagcaggtggcccaatggattttagagaggctctgataccatattagaaattgtggttgg 20303402  T
Q  172 gcctaa-acaaccccacacaaccggcttgt 200  Q
     ||||| ||||||||||| |||||||||||    
T  20303403 acctaacacaaccccacaaaaccggcttgt 20303432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 35038390 - 35038502
Alignment:
Q  116 aggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgt 214  Q
    ||||| |||||||||||||  |||  | ||||||||| ||||||| |||||||||||||||| ||||||||||| |||| |||||| |||||| |||||     
T  35038390 aggtggcccaatggatcttggagaggcactgataccatcttagaagtcgtggttgggcctaacacaaccccacaaaaccagcttgtcaggtgaggattgc 35038489  T
Q  215 ccccacatataaa 227  Q
    |||||| ||||||    
T  35038490 ccccacttataaa 35038502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 16239687 - 16239601
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||||| ||||||||||| |||||| | ||| |||||| ||||||    
T  16239687 ctctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgaggtttgcccccacttataaa 16239601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 12930119 - 12930199
Alignment:
Q  145 tgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatat 224  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||| ||||||||||| | ||||  |||||||||||||||    
T  12930119 tgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtgaagtgagaattgtccccacatat 12930199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 45828185 - 45828029
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||| ||||||   |||  || ||| ||||| | |||||||||||  |||  ||||||||||| ||||||||| ||||| ||    
T  45828185 gtggacataaatggtgggtggctcgatagcggaaacctggtagcaggtggcgcaatggatcttggagaggctctgataccatcttagaaattgtggtagg 45828086  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| |||||| |||| ||||||||||| |||||| ||||| ||| || ||||||    
T  45828085 gcctaacacaacctcacaaaaccggcttgtgaggtgaggattgccccaacttataaa 45828029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 45138959 - 45139038
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttggg-cctaaacaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    ||||||||||| ||||||||||||||||||| | || ||||||||||| ||||||||||| |||||| ||||| ||||||    
T  45138959 ctctgataccatcttagaaatcgtggttgggtcttacacaaccccacaaaaccggcttgtgaggtgaggattgcccccac 45139038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 20327619 - 20327689
Alignment:
Q  159 aaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| |||||||    
T  20327619 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaat 20327689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 31317397 - 31317239
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatctta-aagaaactctgataccaac---ttagaaatcgtgg 167  Q
    ||||||||||||| || |||||||||||  |||||  |||||| |||||  |||| |||||||  |||| |||||||||||| |   |||||||||||||    
T  31317397 gtggacataaatggtgggtggcccgataa-caaaacctgatagtaggtggtccaacggatcttggaagagactctgataccaccatcttagaaatcgtgg 31317299  T
Q  168 ttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||| |||||| |||| |||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  31317298 ttgagcctaacacaatcccacaaaaccggcttgtgaggtgaggattg-ccccacttataaa 31317239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 31317550 - 31317476
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| |||||||| || || |||||||| ||||||||||| ||||||| ||||||    
T  31317550 cttagaaatcgtggttgggcctaacacaaccccgcaaaatcggcttgtgaggtgatgattttccccacttataaa 31317476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 35038194 - 35038268
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||  |||||| ||||||    
T  35038194 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaa 35038268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 8142597 - 8142698
Alignment:
Q  104 aaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaa 202  Q
    |||| |||||| || ||||| ||||||| |||||||  ||||||||||| |||||||||||||||| | ||||| ||||||||||| |||||  ||||||    
T  8142597 aaatctgatagcagatgacctaatggattttaaagaggctctgataccatcttagaaatcgtggttagacctaacacaaccccacaaaaccgatttgtaa 8142696  T
Q  203 gg 204  Q
    ||    
T  8142697 gg 8142698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 13574838 - 13574995
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaa-gaaactctgataccaacttagaaatcgtggttg 170  Q
    ||||||||||||| || ||| | ||||||   |||  |||||| ||||| |||||||||||||||  ||  || ||||||||  |||||||| |||||||    
T  13574838 gtggacataaatggtgggtgacacgatagcggaaacctgatagcaggtggcccaatggatcttaactgaggctttgataccatattagaaattgtggttg 13574937  T
Q  171 ggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||| ||||||||||| ||| ||||||| |||||| ||||  |||||| ||||||    
T  13574938 ggcctaacacaaccccacaaaactggcttgtgaggtgaggatttcccccacttataaa 13574995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 24866281 - 24866221
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| |||||    
T  24866281 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattg 24866221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 1353531 - 1353473
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgatt 212  Q
    |||| |||||||||||||||||| ||||||||||| |||||| ||||||||||||||||    
T  1353531 ttaggaatcgtggttgggcctaacacaaccccacaaaaccggtttgtaaggtgatgatt 1353473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 4155643 - 4155569
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||| | | ||||||||| | |||||| |||||||||||| ||||||    
T  4155643 cttagaaatcgtggttgggcctaacacaaccctaaaaaaccggcttttgaggtgaggattgtccccacttataaa 4155569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 8019052 - 8018978
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||| |||||  ||||| ||||||    
T  8019052 cttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcacccacttataaa 8018978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 17638330 - 17638245
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||| |||||| |||||||||||||||||||||||| |||||||| || |||| |||||| |||||| ||||| |||||| ||||||    
T  17638330 ctcttataccatcttagaaatcgtggttgggcctaacacaacccctcaaaaccagcttgtgaggtgaggattg-ccccacttataaa 17638245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 22729195 - 22729117
Alignment:
Q  143 tctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    |||||||||| ||||||||| |||||||||||||| |||||| |||| ||||||||||| | |||| ||||| ||||||    
T  22729195 tctgataccatcttagaaattgtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccac 22729117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 7697398 - 7697471
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataa 226  Q
    ||||||||| |||||| ||||||| ||||||||||| |||| |||||| |||||||||||| |||||| |||||    
T  7697398 cttagaaattgtggttaggcctaacacaaccccacaaaaccagcttgtgaggtgatgattgcccccacttataa 7697471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 9273056 - 9272971
Alignment:
Q  143 tctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||  |||||||| |||||||||| ||| ||||||||||| ||||||||||| |||||| | ||| |||||| ||||||    
T  9273056 tctgataccatattagaaatggtggttgggcttaacacaaccccacaaaaccggcttgtgaggtgagggttgcccccacttataaa 9272971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 13574686 - 13574738
Alignment:
Q  156 tagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||| ||||||    
T  13574686 tagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtga 13574738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 50052540 - 50052604
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccc 218  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| | |||| ||||| ||||    
T  50052540 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaagtgaggattgccccc 50052604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 8142408 - 8142467
Alignment:
Q  154 cttagaaatcgtggttgggcctaaacaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    ||||||||||||| ||||||||| |||||| |||| ||||||||||| |||||| |||||    
T  8142408 cttagaaatcgtgattgggcctacacaacctcacaaaaccggcttgtgaggtgaggattg 8142467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 39269428 - 39269341
Alignment:
Q  141 actctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||| |||| ||||||| ||| ||||||| |||| ||| || ||||||||||| |||||| ||||| |||||| ||||||    
T  39269428 actctgataccatcttaaaaatcgtagttaggcctaacacaatccctcaaaaccggcttgtgaggtgaggattgcccccacttataaa 39269341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 45138805 - 45138876
Alignment:
Q  157 agaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||| || | ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  45138805 agaaatcgtggttgggtctcatacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 45138876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 45828331 - 45828256
Alignment:
Q  153 acttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||| ||||||||||||| ||||||||||| |||| |||||| |||||  ||||| |||||| ||||||    
T  45828331 acttagaaatcatggttgggcctaacacaaccccacaaaacctgcttgtgaggtggagattgcccccacttataaa 45828256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 47702410 - 47702469
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    ||||||||||||||||||||||| ||||||||||| |||| ||||||||| ||| |||||    
T  47702410 ttagaaatcgtggttgggcctaacacaaccccacaaaaccagcttgtaagatgaggattg 47702469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 472064 - 472134
Alignment:
Q  158 gaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||| |||| | ||||| |||||| ||||||    
T  472064 gaaatcgtggtttggcctaacacaaccccacaaaaccggcttgtgaggtaaggattgcccccacttataaa 472134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 32215520 - 32215569
Alignment:
Q  159 aaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    ||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  32215520 aaatcgtggttgggcctaacacaactccacaaaaccggcttgtaaggtga 32215569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 33205547 - 33205475
Alignment:
Q  156 tagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||| |||||||| || ||| ||||||| |||||| ||||| ||  |||||||||    
T  33205547 tagaaatcgtggttgggcctaacacaaccccgcaaaactggcttgtgaggtgaggattgcccttacatataaa 33205475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 17001408 - 17001495
Alignment:
Q  141 actctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||  ||||||||| ||||||| ||||| || |||||||| || || ||| | |||||||||||| |||||| ||||||    
T  17001408 actctgataccattttagaaatcatggttggacctaacactaccccacaaaatcgccttatgaggtgatgattgcccccacttataaa 17001495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 20303064 - 20303139
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    |||| |||||||||||| |||||| |||| |||||| |||||| |||| |||||| ||||| |||||| |||||||    
T  20303064 cttaaaaatcgtggttgagcctaacacaatcccacaaaaccggtttgtgaggtgaggattgcccccacttataaat 20303139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 28087203 - 28087274
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgatt 212  Q
    ||||| ||||| ||||||||||||| ||||| || | |||| |||||| ||||||||||| |||||||||||    
T  28087203 ctctggtaccatcttagaaatcgtgattgggtctgacacaatcccacaaaaccggcttgtgaggtgatgatt 28087274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 50083080 - 50083155
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaacccc-acacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||| ||||||||||||| |||||||| ||| ||||||||||| |||||| ||||  |||||| ||||||    
T  50083080 cttagaaatcatggttgggcctaacacaacccccacaaaaccggcttgtgaggtgaggatttcccccacttataaa 50083155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 472104 - 472142
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacattgt 73  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  472104 ttgtgaggtaaggattgcccccacttataaacacattgt 472142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 6487338 - 6487392
Alignment:
Q  159 aaatcgtggttgggcctaaa-caaccccacacaaccggcttgtaaggtgatgatt 212  Q
    |||||||||||||||||||| |||||||| | ||||||||||| |||||| ||||    
T  6487338 aaatcgtggttgggcctaaaacaaccccataaaaccggcttgtgaggtgaggatt 6487392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 18757922 - 18757852
Alignment:
Q  158 gaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||| | |||| ||| | |||||| ||||||    
T  18757922 gaaatcgtggttgggcctaacacaaccccacaaaaccgccttgtgatgtgaggatcgcccccacttataaa 18757852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 27670381 - 27670466
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  |||||| | |||||||||||||| ||||||||||| ||||||| | | |||||| ||||| |||||| ||||||    
T  27670381 ctctgataccatattagaa-tggtggttgggcctaacacaaccccacaaaaccggcctttgaggtgaggattgcccccacttataaa 27670466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 1800121 - 1800068
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccg 194  Q
    ||||||||||| ||||||||| |||||||||||||| |||||| |||| |||||    
T  1800121 ctctgataccatcttagaaattgtggttgggcctaatacaaccgcacaaaaccg 1800068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 21833444 - 21833399
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaacccca 186  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||    
T  21833444 ctctgataccatgttagaaatcgtggttgggcctaacacaacccca 21833399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 26272292 - 26272385
Alignment:
Q  122 cccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgt 214  Q
    |||||||||| || ||||  || ||||| || ||||||||| ||||||||| |||| ||||||||||| || | |||||| |||||| ||||||    
T  26272292 cccaatggatattgaagatgctttgatatcatcttagaaattgtggttgggtctaacacaaccccacaaaatcagcttgtgaggtgacgattgt 26272385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 33640141 - 33640076
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtg 206  Q
    |||||||| || ||||||||| ||| |||||||||| |||| |||||| ||||||||||| |||||    
T  33640141 ctctgatatcatcttagaaattgtgattgggcctaacacaatcccacaaaaccggcttgtgaggtg 33640076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 34610645 - 34610580
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccc 218  Q
    ||||||||| ||||||||| |||| ||||||||||| ||||| ||||| |||||| ||||| ||||    
T  34610645 cttagaaattgtggttgggtctaacacaaccccacaaaaccgacttgtgaggtgaggattgccccc 34610580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 67
Target Start/End: Complemental strand, 21387395 - 21387363
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaaca 67  Q
    |||||||||||||||||||| ||||||||||||    
T  21387395 ttgtaaggtaaggattgcccccacttataaaca 21387363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 46139430 - 46139366
Alignment:
Q  70 ttgtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatctt 134  Q
    ||||| ||||||||| || ||||||||||||   |||  |||||| |||||||||||||||||||    
T  46139430 ttgtgaacataaatggtgggtggcccgatagcagaaacctgatagcaggtgacccaatggatctt 46139366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 61; Significance: 3e-26; HSPs: 4)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 2038 - 1926
Alignment:
Q  116 aggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgt 214  Q
    ||||| |||||||||||||  |||  ||||||||||| ||||||||| |||||||||||||| ||||||||||| |||||||||||||||||| |||||     
T  2038 aggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgc 1939  T
Q  215 ccccacatataaa 227  Q
    |||||| ||||||    
T  1938 ccccacttataaa 1926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 2235 - 2161
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||||| ||||||    
T  2235 cttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaa 2161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 1956 - 1918
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacattgt 73  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  1956 ttgtaaggtgaggattgcccccacttataaacacattgt 1918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 2191 - 2153
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacattgt 73  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  2191 ttgtaaggtgaggattgcccccacttataaacacattgt 2153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 2029935 - 2029779
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || |||| |||||||   |||  | |||| ||||| |||||||||||||  |||  ||||||||||| ||||||||||||||||||    
T  2029935 gtggacataaatggtgggtggtccgatagcggaaacctaatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgg 2029836  T
Q  172 gcct-aaacaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||| ||||||||||||| ||||||||||| |||||| ||||| | |||| ||||||    
T  2029835 gcctaaaacaaccccacaaaaccggcttgtgaggtgaggattgcctccacttataaa 2029779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 14466328 - 14466484
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||||||||||   |||  |||||  | ||| |||||||||||||  |||  ||||||||||| ||||||||| ||||||||    
T  14466328 gtggacataaatggtgggtggcccgatagcggaaacctgataacaagtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgg 14466427  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| ||||||||||| |||||||||||||||||| |||||  ||||| ||||||    
T  14466428 gcctaacacaaccccacaaaaccggcttgtaaggtgaggattgctcccacttataaa 14466484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 207
Target Start/End: Complemental strand, 16419433 - 16419297
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||| ||||||   |||  |||||| ||||| |||||||||||||  |||  ||||||||||| ||||||||||||||||||    
T  16419433 gtggacataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgg 16419334  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    |||||| ||||||||||| ||||||||||| ||||||    
T  16419333 gcctaatacaaccccacaaaaccggcttgtgaggtga 16419297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 40379362 - 40379518
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||| ||||||| || ||||||||||||   |||  |||||| ||||| || ||||||||||  | |  ||||||||||| ||||||||||||||||||    
T  40379362 gtggatataaatggtgggtggcccgatagaggaaacctgatagcaggtggcctaatggatcttggaaaggctctgataccatcttagaaatcgtggttgg 40379461  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  40379462 gcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 40379518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 29718445 - 29718338
Alignment:
Q  121 acccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccca 219  Q
    ||||||||||| ||| |||  |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||| |||||| ||||| || ||    
T  29718445 acccaatggattttagagaggctctgataccaacttagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctca 29718346  T
Q  220 catataaa 227  Q
    | ||||||    
T  29718345 cttataaa 29718338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 10571069 - 10570994
Alignment:
Q  139 aaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||| |||||    
T  10571069 aaactctgataccatcttagaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtaaggtgaagattg 10570994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 5711663 - 5711749
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| | ||||||||| |||||||||||||| ||||||||||| ||||||||| |||||||||||||| |||||| ||||||    
T  5711663 ctctgatactatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttttaaggtgatgattgcccccacttataaa 5711749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 28407781 - 28407867
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||| |||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  28407781 ctctgataccatcttagaaatcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 28407867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 19191611 - 19191684
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| |||||||||||| ||||||    
T  19191611 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgtccccacttataaa 19191684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 177
Target Start/End: Original strand, 40149154 - 40149259
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||  || |||| |||||||   |||| |||||| ||||||||||||||||||| ||||  ||||||||||| ||||||||| ||||||||    
T  40149154 gtggacataaatagtgggtggtccgatagctgaaatctgatagcaggtgacccaatggatcttgaagaggctctgataccatcttagaaattgtggttgg 40149253  T
Q  172 gcctaa 177  Q
    ||||||    
T  40149254 gcctaa 40149259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 17719566 - 17719410
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| ||  ||||| |||||   |||  |||||| ||||| || ||||||||||  ||| ||| |||||||| ||||||||| ||||||||    
T  17719566 gtggacataaatggtggatggccggataggggaaacctgatagcaggtggccaaatggatcttggagagactttgataccatcttagaaattgtggttgg 17719467  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||| || ||||||| ||| ||||||||||| |||||| ||||| |||||| ||||||    
T  17719466 gccgaacacaacccgacaaaaccggcttgtgaggtgaggattgcccccacttataaa 17719410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 2324336 - 2324250
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  ||| ||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  2324336 ctctgataccatattaaaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 2324250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 5711439 - 5711513
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  5711439 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgttaggtgaggattgcccccacttataaa 5711513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 16419586 - 16419512
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  16419586 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 16419512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 40379209 - 40379283
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  40379209 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 40379283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 213
Target Start/End: Complemental strand, 24396028 - 24395887
Alignment:
Q  73 tggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttggg 172  Q
    |||||||||||| || |||| |||||||| ||||  ||| || |||||  |||||||||||| ||||  ||||||||||  |||||||||||||||| ||    
T  24396028 tggacataaatggtgggtggtccgatagtgaaaacatgagagcaggtggtccaatggatcttgaagaggctctgataccctcttagaaatcgtggtttgg 24395929  T
Q  173 cctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    ||||| ||||||||||| || ||  |||| |||||| |||||    
T  24395928 cctaacacaaccccacaaaatcgatttgtgaggtgaggattg 24395887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 15124701 - 15124857
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| ||  || |||||||   ||||  |||||| |||||  ||||||||||||  ||| |||||||||||| ||||||||||||||||||    
T  15124701 gtggacataaatggtggatgacccgataacgaaaacctgatagcaggtggtccaatggatcttggagagactctgataccatcttagaaatcgtggttgg 15124800  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    | |||| ||||||||||| |||||  |||| | |||| ||||| || ||| ||||||    
T  15124801 gtctaacacaaccccacaaaaccgaattgtgaagtgaagattgccctcacttataaa 15124857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 33606207 - 33606363
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || |||||| |||||   |||  |||||| | |||||||||| |||||| |||| ||| ||||| || |||||||||||||||||     
T  33606207 gtggacataaatggtgggtggcctgatagcggaaacctgatagcaagtgacccaatagatcttgaagagactttgatatcatcttagaaatcgtggttgt 33606306  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| | ||| ||||| ||| ||||||| |||||| ||||  |||||| ||||||    
T  33606307 gcctaacataacgccacaaaactggcttgtgaggtgaggattacccccacttataaa 33606363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 36352121 - 36352233
Alignment:
Q  116 aggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgt 214  Q
    ||||| ||| ||||||||| |||| ||||| |||||| |||| |||| |||||||  ||||| ||||||||||| ||||||||| | ||||||||||||     
T  36352121 aggtggcccgatggatcttgaagagactctaataccatcttaaaaattgtggttgaacctaacacaaccccacaaaaccggcttttgaggtgatgattgc 36352220  T
Q  215 ccccacatataaa 227  Q
    |||||| ||||||    
T  36352221 ccccacttataaa 36352233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 193
Target Start/End: Original strand, 93272 - 93394
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    |||||||||| || || |||||||||||    |||  |||||| ||||| |||||||||||||  |||  ||||||||||| |||| |||||||||||||    
T  93272 gtggacataattggtgggtggcccgataacggaaagctgatagcaggtggcccaatggatcttggagaggctctgataccatcttaaaaatcgtggttgg 93371  T
Q  172 gcctaa-acaaccccacacaacc 193  Q
    |||||| ||||||||||| ||||    
T  93372 gcctaacacaaccccacaaaacc 93394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 2030088 - 2030014
Alignment:
Q  154 cttagaaatcgtggttgggcctaaa-caaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||| |||||| ||||| | |||| ||||||    
T  2030088 cttagaaatcgtggttgggcctaaaacaaccccacaaaaccggcttgtgaggtgaggattgcctccacttataaa 2030014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 93582 - 93667
Alignment:
Q  109 tgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaacc 193  Q
    |||||| |||||||||||||||||||  | |   |||||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  93582 tgatagtaggtgacccaatggatcttggaaaggttctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaacc 93667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 21591884 - 21591801
Alignment:
Q  136 aagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccc 218  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||||||||| | ||||| ||| | |||||| ||||| ||||    
T  21591884 aagagactctgctaccaacttagaaatcgtggttgggcctaacacaaccccataaaaccgacttatgaggtgaagattgccccc 21591801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 2324554 - 2324484
Alignment:
Q  158 gaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  2324554 gaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 2324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 5509175 - 5509089
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  ||||||||| ||||||||||||| ||||||||||| |||| |||||| |||||| ||||  |||||| ||||||    
T  5509175 ctctgataccatattagaaatcatggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattacccccacttataaa 5509089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 17719650 - 17719576
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||| |||| | ||||| |||||| ||||||    
T  17719650 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggtttgtgaggtcaggattgcccccacttataaa 17719576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 25082537 - 25082611
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||| ||||| ||||||||||| ||| ||||||| |||||||||||| ||| || ||||||    
T  25082537 cttagaaatcgtggttggacctaacacaaccccacaaaactggcttgtgaggtgatgattgcccctacttataaa 25082611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 30006579 - 30006653
Alignment:
Q  154 cttagaaatcgtggttgggcc-taaacaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||||| || |||||| |||| |||||||||||  |||||||||| ||||||| ||||||    
T  30006579 cttagaaatcgtggttgggccgtacacaacctcacaaaaccggcttgtgtggtgatgattatccccacttataaa 30006653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 30063267 - 30063341
Alignment:
Q  154 cttagaaatcgtggttgggcc-taaacaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||||| || |||||| |||| |||||||||||  |||||||||| ||||||| ||||||    
T  30063267 cttagaaatcgtggttgggccatacacaacctcacaaaaccggcttgtgtggtgatgattatccccacttataaa 30063341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 30701174 - 30701260
Alignment:
Q  70 ttgtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaactt 156  Q
    ||||||||||||||| ||  |||||||||||  ||||  |||||| ||||| ||||||||||||| |||| ||||| ||||||||||    
T  30701174 ttgtggacataaatggtggatggcccgatagaaaaaacctgatagtaggtggcccaatggatcttgaagagactctaataccaactt 30701260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 37840433 - 37840347
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||| |||||| |||| |||| ||||||||||| || ||||||||||| ||||||||||| |||||||||||| | |||| ||||||    
T  37840433 ctctaataccatcttaaaaattgtggttgggcccaacacaaccccacaaaaccggcttgtgaggtgatgattgcctccacttataaa 37840347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 17525347 - 17525412
Alignment:
Q  162 tcgtggttgggcctaaacaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||| |||| |||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  17525347 tcgtggttgggcctacacaatcccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 17525412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 17854693 - 17854766
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||||||| |||| |||||| ||||| ||||| || ||||||||| |||||| ||||||    
T  17854693 ttagaaatcgtggttgggcctaacacaatcccacaaaaccgacttgtgagatgatgattgcccccacttataaa 17854766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 40149004 - 40149077
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| ||||||| ||||| ||||||||||| || |||||||| |||||| |||||||||||| ||||||    
T  40149004 ttagaaatcatggttggacctaacacaaccccacaaaatcggcttgtgaggtgaggattgtccccacttataaa 40149077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 172
Target Start/End: Complemental strand, 16533478 - 16533378
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||||||||||  ||||  |||||| ||||  ||||||||||||| ||||  |||||||||||  |||||| |||| |||||    
T  16533478 gtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggtagcccaatggatcttgaagaggctctgataccattttagaagtcgtagttgg 16533379  T
Q  172 g 172  Q
    |    
T  16533378 g 16533378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 17854911 - 17855003
Alignment:
Q  136 aagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||| ||||||||| ||  |||||||||||||||||| |||  ||||||||||| ||||||||||| |||||| ||||| || ||| ||||||    
T  17854911 aagagactctgatatcatattagaaatcgtggttgggtctagcacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataaa 17855003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 27897588 - 27897660
Alignment:
Q  136 aagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    |||| ||| |||||||| ||||||||| |||||||||||||| ||||||||||| ||||| ||||| ||||||    
T  27897588 aagagactttgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccgacttgtgaggtga 27897660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 32356507 - 32356396
Alignment:
Q  116 aggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgt 214  Q
    ||||| ||||||| || || ||||  ||||||||||||||||||| |||| ||||||||||| ||||| ||||| ||| |||||||  ||||| |||||     
T  32356507 aggtggcccaatgaatattgaagaggctctgataccaacttagaattcgtagttgggcctaacacaactccacaaaactggcttgt-gggtgaggattgc 32356409  T
Q  215 ccccacatataaa 227  Q
    |||||| ||||||    
T  32356408 ccccacttataaa 32356396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 32884184 - 32884117
Alignment:
Q  161 atcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||| ||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  32884184 atcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 32884117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 8424971 - 8424897
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    |||||||||||||||| || ||| ||||||||||| ||| || |||| |||||||||||| |||||| |||||||    
T  8424971 ttagaaatcgtggttgagcttaacacaaccccacaaaactggtttgtgaggtgatgattgcccccacttataaat 8424897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 21383658 - 21383723
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtg 206  Q
    ||||||||||| ||||||||||||||||||||||||  ||| |||||| |||||| |||| |||||    
T  21383658 ctctgataccatcttagaaatcgtggttgggcctaactcaatcccacaaaaccggtttgtgaggtg 21383723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 31700745 - 31700798
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtg 206  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||| |||||    
T  31700745 cttagaaatcgtggttgggcctaacacaaacccacaaaaccggcttgtgaggtg 31700798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 36316052 - 36316125
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||| ||||| | ||||||||| ||| ||||||||| |||| ||||| |||||| ||||||    
T  36316052 ttagaaatcgtggttggacctaacataaccccacaaaactggcttgtaatgtgaggattgcccccacttataaa 36316125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 37769948 - 37770017
Alignment:
Q  159 aaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||| |||| ||||||||||| ||||||||| | |||||| ||||| |||||| ||||||    
T  37769948 aaatcgtggttgggtctaacacaaccccacaaaaccggcttatgaggtgaagattgcccccacttataaa 37770017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 5851681 - 5851757
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaacc-ccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    |||||||||  ||||||| ||||| |||||| ||||| ||||||||||| |||||| |||||||||||| |||||||    
T  5851681 cttagaaatgatggttggacctaacacaacctccacaaaaccggcttgtgaggtgaggattgtccccacttataaat 5851757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 31700940 - 31700995
Alignment:
Q  122 cccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa 177  Q
    |||||||||||||  |||  |||| |||||| ||||||||||||||||||||||||    
T  31700940 cccaatggatcttggagaggctctaataccatcttagaaatcgtggttgggcctaa 31700995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 5450500 - 5450546
Alignment:
Q  164 gtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatg 209  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  5450500 gtggttgggcctaagacaaccccacaaaaccggcttgtgaggtgatg 5450546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 15518800 - 15518762
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacattgt 73  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  15518800 ttgtgaggttaggattgccctcacttataaacacattgt 15518762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 15988497 - 15988423
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaa-ccccacacaaccggcttgtaaggtgatgattgtccccacatataa 226  Q
    ||||||||||||||||||||| || |||| ||||||| ||| ||||||| |||||| ||||| |||||| |||||    
T  15988497 cttagaaatcgtggttgggcccaacacaacccccacaaaactggcttgtgaggtgaggattgcccccacttataa 15988423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 42639614 - 42639680
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccca 219  Q
    |||||| || ||||||||| |||| ||||||||||| |||| |||||| |||||| |||||||||||    
T  42639614 cttagagatggtggttgggtctaacacaaccccacaaaaccagcttgtgaggtgacgattgtcccca 42639680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 5509392 - 5509323
Alignment:
Q  159 aaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||| ||||| || |||||||| |||||||||||  ||||| ||||| |||||| ||||||    
T  5509392 aaatcgtggttggacctaacactaccccacaaaaccggcttgtggggtgaggattgcccccacttataaa 5509323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 27036403 - 27036460
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggctt 198  Q
    |||||||||||  ||||||||| ||||||||||||| ||||||| ||| |||||||||    
T  27036403 ctctgataccatattagaaatcatggttgggcctaacacaaccctacaaaaccggctt 27036460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 32810890 - 32810923
Alignment:
Q  182 ccccacacaaccggcttgtaaggtgatgattgtc 215  Q
    ||||||| ||||||||||||||||||||||||||    
T  32810890 ccccacaaaaccggcttgtaaggtgatgattgtc 32810923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 34893591 - 34893506
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaactta 157  Q
    ||||||||||||| || |||| |||||||  ||||  |||||| ||||| |||||||||||||  |||  ||||||||||| ||||    
T  34893591 gtggacataaatggtgggtggtccgatagcgaaaacctgatagtaggtggcccaatggatcttggagaggctctgataccatctta 34893506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 13210622 - 13210550
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    ||||||||||| ||||||| | |||||||||||||| || |||||||| ||||| | ||| |||||| |||||    
T  13210622 ctctgataccatcttagaatttgtggttgggcctaacacgaccccacaaaaccgacctgtgaggtgaggattg 13210550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 21383284 - 21383351
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccac--acaaccggcttgtaaggtgatgattgtcccc 218  Q
    ||||||||| |||||||||||||| ||||||||||  | ||||||||||| |||||| ||||| ||||    
T  21383284 cttagaaattgtggttgggcctaacacaaccccacaaaaaaccggcttgtgaggtgaggattgccccc 21383351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 4098321 - 4098476
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||| | || ||||||||||||   |||  |||| | ||||| ||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  4098321 gtggacataaagggtgggtggcccgatagcagaaacctgattgcaggtggcccaatggatcttgaagagtctctgataccaacttagaaatcgtggttgg 4098420  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| |||| |||||| ||||  |||||||||||| ||||| |||||| ||||||    
T  4098421 gcctaacacaa-cccacaaaaccaacttgtaaggtgaggattgcccccacttataaa 4098476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 30370001 - 30369845
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || |||||||||||||  |||  |||||| |||||||||||||||||||  |||  ||||||||| | ||||||||||||||||||    
T  30370001 gtggacataaatggtgggtggcccgatagtggaaacctgatagcaggtgacccaatggatcttggagaggctctgatacaatcttagaaatcgtggttgg 30369902  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| ||||||||||| |||   ||||| |||||| ||||| ||| || ||||||    
T  30369901 gcctaacacaaccccacaaaactatcttgtgaggtgaggattgcccctacttataaa 30369845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 213
Target Start/End: Complemental strand, 35772195 - 35772053
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||||||||||   |||  |||||| || || ||||||||||||| |  |  ||||||||||| ||||||||||||||||||    
T  35772195 gtggacataaatggtgggtggcccgatagcggaaacctgatagcagatggcccaatggatcttgagaaggctctgataccatcttagaaatcgtggttgg 35772096  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    |||||| ||||||||||| ||||||||||  |||||| |||||    
T  35772095 gcctaacacaaccccacaaaaccggcttgcgaggtgaggattg 35772053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 17452790 - 17452903
Alignment:
Q  116 aggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgt 214  Q
    ||||| |||||||||| ||| |||  |||| |||||| |||||||||||||||| ||||||| ||||||||||| ||||||||||| |||||| |||||     
T  17452790 aggtggcccaatggattttagagaggctctaataccatcttagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgc 17452889  T
Q  215 ccccacatataaat 228  Q
    |||||| |||||||    
T  17452890 ccccacttataaat 17452903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 227
Target Start/End: Complemental strand, 3169864 - 3169776
Alignment:
Q  140 aactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  3169864 aactctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaa 3169776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 4112976 - 4113080
Alignment:
Q  124 caatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacat 222  Q
    |||||||||||  |||  ||| ||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| |    
T  4112976 caatggatcttggagaggctccgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccactt 4113075  T
Q  223 ataaa 227  Q
    |||||    
T  4113076 ataaa 4113080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 39348270 - 39348426
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaa-ctctgataccaacttagaaatcgtggttg 170  Q
    ||||||||||||| || |||| ||||||||  |||  |||||| ||||| ||||||||| |||  || |  ||||||||||| ||||||||||||| |||    
T  39348270 gtggacataaatggtgggtggtccgatagtggaaacctgatagcaggtggcccaatggaccttggaggaggctctgataccatcttagaaatcgtg-ttg 39348368  T
Q  171 ggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||| ||||||||||| |||||| |||| |||||| ||||| |||||| ||||||    
T  39348369 ggcctaacacaaccccacaaaaccggtttgtgaggtgaggattgcccccacttataaa 39348426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 226
Target Start/End: Complemental strand, 26177074 - 26176919
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||| ||||||| || |||| |||||||   |||| |||||| ||||| |||||||||||||  |||  |||||||| || ||||||||||| ||||||    
T  26177074 gtggatataaatggtgggtggtccgatagcggaaatctgatagcaggtggcccaatggatcttggagaggctctgatatcatcttagaaatcgcggttgg 26176975  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataa 226  Q
    |||||| ||||||||||| |||||| || | |||||| ||||| || ||| |||||    
T  26176974 gcctaacacaaccccacaaaaccggtttttgaggtgaggattgccctcacttataa 26176919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 29266049 - 29265970
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||  |||| ||||||    
T  29266049 ctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccagcttgtaaggtgagtattgcccccac 29265970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 227
Target Start/End: Complemental strand, 38668290 - 38668135
Alignment:
Q  73 tggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttggg 172  Q
    ||||||||||||||  ||| ||||||||   |||  |||||  ||||||||||||||||| |  |||  ||||||||||| ||||||||| ||| |||||    
T  38668290 tggacataaatgataggtgacccgatagcagaaacctgataacaggtgacccaatggatcatggagaggctctgataccatcttagaaattgtgattggg 38668191  T
Q  173 cctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||| ||||||||||| ||  ||||||| || ||||||||| |||||| ||||||    
T  38668190 cctaacacaaccccacaaaattggcttgtgagatgatgattgcccccacttataaa 38668135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 17452680 - 17452754
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| |||||||    
T  17452680 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaat 17452754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 40079236 - 40079162
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  40079236 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 40079162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 2859545 - 2859686
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||||||||||   |||  | |||| ||||| ||||||||||||| ||||  |||| |||||| |||||||||  |||||||    
T  2859545 gtggacataaatggtgggtggcccgatagcagaaacctaatagaaggtggcccaatggatcttgaagaggctctaataccatcttagaaatgatggttgg 2859644  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgatt 212  Q
    | |||| |||||| |||| ||||||||||| |||||| ||||    
T  2859645 ggctaacacaacctcacaaaaccggcttgtgaggtgaggatt 2859686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 207
Target Start/End: Complemental strand, 35892222 - 35892086
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||| ||||||||   |||| |||||| | ||| ||||||| ||||| |||| |||||||||||  |||||||||||||| |||    
T  35892222 gtggacataaatggtgggtgccccgatagcagaaatatgatagcaagtggcccaatgaatcttgaagagactctgataccttcttagaaatcgtggatgg 35892123  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    || ||| ||||||||||| | || |||| ||||||||    
T  35892122 gcttaacacaaccccacaaatccagcttataaggtga 35892086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 51589322 - 51589236
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  ||||||||||||||| ||||||| ||||||||||| ||||||||||| |||||| ||||| || ||| ||||||    
T  51589322 ctctgataccatattagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataaa 51589236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 51589902 - 51589816
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||||| || |||||||| |||||| ||||| || ||| ||||||    
T  51589902 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccctcacttataaa 51589816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 205
Target Start/End: Original strand, 31496326 - 31496423
Alignment:
Q  109 tgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggt 205  Q
    |||||| |||||  ||||||||||||||||| ||||| |||| | ||||||||||||| ||| | |||| ||||||||| | ||||||||||||||||    
T  31496326 tgatagcaggtggtccaatggatcttaaagagactctaatactatcttagaaatcgtgattgagtctaacacaaccccataaaaccggcttgtaaggt 31496423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 8870864 - 8870964
Alignment:
Q  108 ttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtg 206  Q
    ||||||| ||||| |||||||||| ||  ||| |||||||||||| ||||||||| |||||||| ||||| ||||||||||| || |||||| | |||||    
T  8870864 ttgatagcaggtggcccaatggatattggagagactctgataccatcttagaaatggtggttggacctaacacaaccccacaaaaacggcttatgaggtg 8870963  T
Q  207 a 207  Q
    |    
T  8870964 a 8870964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 215
Target Start/End: Complemental strand, 27413513 - 27413369
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || ||||||||||||   |||| |||||  |||||  | ||| ||||||  |||  |||||||| || ||||||||||||||||||    
T  27413513 gtggacataaatggtgggtggcccgatagcggaaatctgataacaggtggtctaatagatcttggagaggctctgatatcatcttagaaatcgtggttgg 27413414  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtc 215  Q
     ||||| |||||| |||| || |||||||| |||||| |||||||    
T  27413413 acctaacacaacctcacaaaatcggcttgtgaggtgaggattgtc 27413369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 218
Target Start/End: Complemental strand, 33156900 - 33156752
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaa-ctctgataccaacttagaaatcgtggttg 170  Q
    ||||||||||||| ||  |||||||||||   |||  |||||| |||||| |||| |||||||  || |  |||| |||||| |||||||||||||||||    
T  33156900 gtggacataaatggtggatggcccgatagcggaaacctgatagcaggtgaaccaacggatcttggagtaggctctaataccatcttagaaatcgtggttg 33156801  T
Q  171 ggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccc 218  Q
    ||||||| ||||||||||| |||||| |||| || ||| ||||| ||||    
T  33156800 ggcctaacacaaccccacaaaaccggtttgtgagatgaggattgccccc 33156752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 25145708 - 25145787
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    |||||||| || |||||||||| ||||||||||||| ||||||||||| | ||||||||| |||||| ||||| ||||||    
T  25145708 ctctgatatcatcttagaaatcatggttgggcctaacacaaccccacaaatccggcttgtgaggtgaggattgcccccac 25145787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 51589085 - 51589002
Alignment:
Q  145 tgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||  |||||||| |||||||||||||| ||||||||||| ||||||||||| |||||| ||||| || ||| ||||||    
T  51589085 tgataccatattagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataaa 51589002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 25255395 - 25255341
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||    
T  25255395 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtga 25255341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 35772348 - 35772274
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| | |||| | ||||| |||||| ||||||    
T  35772348 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttctgaggtaaggattgcccccacttataaa 35772274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 31432230 - 31432295
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccc 218  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||| |||||| ||||| ||||    
T  31432230 cttagaaatcgtggttgggcctagcacaaccccacaaaaccggcttgtgaggtgaggattgccccc 31432295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 51460360 - 51460501
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||| ||||| || || |||||||||   |||  |||||| ||||| |||||||||||||  |||  |||||||| ||  ||||||||  |||||||    
T  51460360 gtggacacaaatggtgggtcgcccgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgatatcattttagaaattatggttgg 51460459  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgatt 212  Q
    |||||| ||||||||||| ||| ||||||||| |||| ||||    
T  51460460 gcctaacacaaccccacaaaactggcttgtaaagtgaagatt 51460501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 28408043 - 28408116
Alignment:
Q  158 gaaatcgtggttgggccta----aacaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||    |||||||||||| ||||||||||| |||| | |||||||||||| ||||||    
T  28408043 gaaatcgtggttgggcctagcctaacaaccccacaaaaccggcttgtgaggtaaggattgtccccacttataaa 28408116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 26865358 - 26865433
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    ||||||||| ||||||| |||||| ||||||||||| ||||||||||| |||||  ||||| |||||| |||||||    
T  26865358 cttagaaattgtggttgagcctaatacaaccccacaaaaccggcttgtgaggtggggattgcccccacttataaat 26865433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 32783251 - 32783298
Alignment:
Q  124 caatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||| |||| |||||||||||| ||||||||||||||||||    
T  32783251 caatggatcttgaagagactctgataccatcttagaaatcgtggttgg 32783298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 2859392 - 2859466
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| |||||||||||||| |||||| |||| ||||||||||| |||| | ||||| |||||| ||||||    
T  2859392 cttagaaatggtggttgggcctaacacaacctcacagaaccggcttgtgaggtaaggattgcccccacttataaa 2859466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 12376591 - 12376732
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaa-ctctgataccaacttagaaatcgtggttg 170  Q
    ||||||||||||| |  |||||| ||||| || ||  |||||| ||||| ||||||||||||||| | |  |||| ||||||||||||||||||| ||||    
T  12376591 gtggacataaatggtaggtggcctgatag-cagaacctgatagcaggtggcccaatggatcttaacggatgctctaataccaacttagaaatcgtcgttg 12376689  T
Q  171 ggcctaa-acaaccccacacaaccggcttgtaaggtgatgatt 212  Q
    | |||||  |||||||| | || |||||||| |||||| ||||    
T  12376690 gacctaactcaaccccataaaaacggcttgtgaggtgaggatt 12376732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 26177227 - 26177153
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||||||| ||| || || | |||||| ||||| |||||| ||||||    
T  26177227 cttagaaatcgtggttgggcctaacacaaccccacaaaactggtttttgaggtgaggattgcccccacttataaa 26177153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 32223847 - 32223773
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| |||||||||||| | ||||||||||||||| ||||||| || ||| ||| | |||||||||||||    
T  32223847 cttagaaattgtggttgggccttacacaaccccacacaactggcttgtgagatgaggatcgcccccacatataaa 32223773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 39348119 - 39348193
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||| ||||| ||| ||||| | |||| ||||||    
T  39348119 cttagaaatcgtggttgggtctaacacaaccccacagaaccggctggtaagttgaggattgcctccacttataaa 39348193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 41035827 - 41035901
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||| ||||| ||||| |||| |||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  41035827 cttagaaatcgtagttggacctaacacaatcccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 41035901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 52650771 - 52650845
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||  ||||||||||||| ||||||||||| |||| |||||| |||||| ||||| |||||| ||||||    
T  52650771 cttagaaattatggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaa 52650845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 26173230 - 26173298
Alignment:
Q  154 cttagaaatcgtggttgggcctaaacaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| ||||||||||||||     |||||| ||||||||||| |||||||||||| |||||| ||||||    
T  26173230 cttagaaatggtggttgggcctaa-----cccacaaaaccggcttgtgaggtgatgattgcccccacttataaa 26173298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 26346957 - 26347042
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaaacaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||| || |||||||||||||||  |||  | ||||||||||| ||| ||||||| |||||| ||||||| |||| ||||||    
T  26346957 ctctgatatcatcttagaaatcgtggtgaggctaacacaaccccacaaaacgggcttgtgaggtgaggattgtctccacttataaa 26347042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 38733280 - 38733219
Alignment:
Q  109 tgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttg 170  Q
    |||||| |||||  ||||||||||||  ||| |||||||||||| |||||||||||||||||    
T  38733280 tgatagcaggtggtccaatggatcttggagagactctgataccatcttagaaatcgtggttg 38733219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 228
Target Start/End: Complemental strand, 35892388 - 35892300
Alignment:
Q  141 actctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    |||||||||||| |||||||||  |||||| |||||| | ||||||||| |||||| |||| ||||||  |||| |||||| |||||||    
T  35892388 actctgataccatcttagaaattatggttgagcctaacagaaccccacaaaaccgggttgtgaggtgagtattgcccccacttataaat 35892300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 38668430 - 38668370
Alignment:
Q  168 ttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||| |||| |||||| ||||| |||||||||||||||||| |||||| ||||||    
T  38668430 ttgggcctaacacaatcccacaaaaccgacttgtaaggtgatgattgcccccacttataaa 38668370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 42586439 - 42586499
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    |||||||||||||||||||||||| ||||||||||| ||  ||||||| |||||| |||||    
T  42586439 cttagaaatcgtggttgggcctaacacaaccccacaaaattggcttgtgaggtgaggattg 42586499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 22377616 - 22377541
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    ||||||||||||||||||| |||| | |||| |||| ||||| ||||  |||||||||||| |||||| |||||||    
T  22377616 cttagaaatcgtggttgggactaacataaccgcacaaaaccgacttgcgaggtgatgattgcccccacttataaat 22377541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 25137304 - 25137363
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||| | |||||| |||||    
T  25137304 ttagaaattgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattg 25137363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 25145485 - 25145552
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccac 220  Q
    ||||||||||||||||||| |||| |||||| |||| ||||| ||||| |||||| ||||| ||||||    
T  25145485 cttagaaatcgtggttgggtctaacacaacctcacaaaaccgacttgtgaggtgaggattgcccccac 25145552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 39544478 - 39544404
Alignment:
Q  154 cttagaaatcgtggttgggcctaaacaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaatg 229  Q
    ||||||||| ||||||||||| | ||||||||||| ||||  ||||||| |||| |||||||||||  ||||||||    
T  39544478 cttagaaatggtggttgggcc-acacaaccccacaaaaccaacttgtaaagtgaggattgtccccatttataaatg 39544404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 51590121 - 51590062
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    |||||||||||| |||||||||| |||| |||||| ||||||||||| |||||| |||||    
T  51590121 ttagaaatcgtgcttgggcctaacacaatcccacaaaaccggcttgtgaggtgaggattg 51590062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 856065 - 855991
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||| ||| ||||||||||| |||| | |||| |||| |||||| |||||| |||||||||||| ||||||    
T  856065 cttagaaaacgtagttgggcctaacacaatctcacaaaaccagcttgtgaggtgaggattgtccccacgtataaa 855991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 2859436 - 2859474
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacattgt 73  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  2859436 ttgtgaggtaaggattgcccccacttataaacacattgt 2859474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 4112540 - 4112614
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||| |||||| |||| |||| | || |||||||| |||||||||||| ||| || ||||||    
T  4112540 cttagaaatcgtggttgtgcctaacacaatcccataaaatcggcttgtgaggtgatgattgcccctacttataaa 4112614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 11234312 - 11234226
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||| |||||| |||| || | |||||||||||||| ||||||||||| ||||||||| | ||||||  | ||||||||| ||||||    
T  11234312 ctctaataccatcttataatttgtggttgggcctaatacaaccccacaaaaccggcttatgaggtgagaactgtccccacttataaa 11234226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 15986333 - 15986407
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| |||||||| ||||| |||||||||||  ||| |||||| |||||| ||||| |||||| ||||||    
T  15986333 cttagaaatggtggttggacctaacacaaccccacaataccagcttgtgaggtgaggattgcccccacttataaa 15986407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 20208528 - 20208600
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| | | |||||| ||||| |||||| ||||||    
T  20208528 cttagaaatcgtggttgggcctaacacaaccccaca-aaccggc-tatgaggtgaggattgcccccacttataaa 20208600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 134
Target Start/End: Complemental strand, 25713324 - 25713262
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatctt 134  Q
    ||||||||||||| || ||||||||||||   ||| ||||||| ||||| |||||||||||||    
T  25713324 gtggacataaatggtgggtggcccgatagcggaaacttgatagcaggtggcccaatggatctt 25713262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 31181513 - 31181587
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||| | |||||||||||||| ||||||||| | |||| |||||| |||||| ||||| |||||| ||||||    
T  31181513 cttagaatttgtggttgggcctaacacaaccccataaaaccagcttgtgaggtgaggattgcccccacttataaa 31181587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 33157305 - 33157231
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||| |||||||||| ||||||||||| ||||| |||   |||||  |||||||||||| ||||||    
T  33157305 cttagaaatcgtgattgggcctaacacaaccccacaaaaccgacttacgaggtggggattgtccccacttataaa 33157231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 40316038 - 40316124
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||| ||||||  |||||||||||||||||  |||| |||||| |||| ||||||||| | |||||| ||||| |||||| ||||||    
T  40316038 ctctaataccatgttagaaatcgtggttggatctaacacaacctcacaaaaccggcttatgaggtgaggattgaccccacttataaa 40316124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 51459705 - 51459779
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| |||||||||||||| |||| |||||| |||| ||||||||| ||  ||||| |||||| ||||||    
T  51459705 cttagaaattgtggttgggcctaatacaatcccacaaaaccagcttgtaagatgcggattgcccccacttataaa 51459779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 186
Target Start/End: Original strand, 51460005 - 51460083
Alignment:
Q  109 tgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaacccca 186  Q
    |||||| ||||| |||||||||||||  |||  | || |||||| ||||||||| |||||||||||||| |||||||||    
T  51460005 tgatagcaggtggcccaatggatcttggagaggcgctaataccatcttagaaattgtggttgggcctaacacaacccca 51460083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 5953725 - 5953810
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataa 226  Q
    ||||||||||| |||| |||| | |||||||||||| |||||| |||  |||| |||||| |||||| |||||||| ||| |||||    
T  5953725 ctctgataccatcttaaaaattgaggttgggcctaatacaacctcactaaaccagcttgttaggtgaagattgtcctcacttataa 5953810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 11925000 - 11924951
Alignment:
Q  159 aaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    ||||||||||||||||||| |||||| |||| |||||| |||||||||||    
T  11925000 aaatcgtggttgggcctaacacaacctcacaaaaccggtttgtaaggtga 11924951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 12244987 - 12245036
Alignment:
Q  178 acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  12244987 acaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 12245036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 35772299 - 35772266
Alignment:
Q  40 aggtaaggattgccctcacttataaacacattgt 73  Q
    ||||||||||||||| ||||||||||||||||||    
T  35772299 aggtaaggattgcccccacttataaacacattgt 35772266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 52127803 - 52127731
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||| ||||| ||||||||||| || | |||||| |||||| ||||| |||||| ||||||    
T  52127803 ttagaaatcgtggttggacctaacacaaccccacaaaagcagcttgtgaggtgaggattg-ccccacttataaa 52127731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 52907467 - 52907394
Alignment:
Q  155 ttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||| |||||||||||| || | ||||||||||| |||| |||||| |||||| ||||| |||||| ||||||    
T  52907467 ttagatatcgtggttgggtcttacacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaa 52907394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 52961509 - 52961428
Alignment:
Q  76 acataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaactta 157  Q
    |||||| || || ||||||||||||   |||  |||||| ||||| ||||||||||||| ||||  ||||||||||||||||    
T  52961509 acataactggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccaactta 52961428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 52961617 - 52961584
Alignment:
Q  40 aggtaaggattgccctcacttataaacacattgt 73  Q
    |||| |||||||||||||||||||||||||||||    
T  52961617 aggtgaggattgccctcacttataaacacattgt 52961584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 369675 - 369639
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacatt 71  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  369675 ttgtaaggtgaggattgcccccacttataaacacatt 369639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 4098446 - 4098482
Alignment:
Q  35 ttgtaaggtaaggattgccctcacttataaacacatt 71  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  4098446 ttgtaaggtgaggattgcccccacttataaacacatt 4098482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 81957 - 81852
Alignment:
Q  123 ccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccaca 221  Q
    ||||||||||||  |||  ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||  |||||||||||     
T  81957 ccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgtaaggtgaaaattgtccccact 81858  T
Q  222 tataaa 227  Q
    ||||||    
T  81857 tataaa 81852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 82160 - 82111
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaa 202  Q
    ||||||||| |||||||||||||| ||||||||||| |||||| ||||||    
T  82160 cttagaaattgtggttgggcctaacacaaccccacaaaaccggtttgtaa 82111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 5672 - 5828
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||||||||| || |||| |||||||   |||  |||||| ||||| | |||||||||||  |||  ||||||||||| ||||||||||||||||||    
T  5672 gtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggctcaatggatcttggagaggctctgataccatcttagaaatcgtggttgg 5771  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||| |||||||| || ||||||||||| || ||| ||||| |||||| ||||||    
T  5772 gcctaacacaaccccgcaaaaccggcttgtgagatgaggattgcccccacttataaa 5828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 5544 - 5618
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||  ||||||||||||| |||||||| || ||||||||||| | |||| ||||| |||||| ||||||    
T  5544 cttagaaattatggttgggcctaacacaaccccgcaaaaccggcttgtgaagtgaggattgcccccacttataaa 5618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 109 - 227
Target Start/End: Complemental strand, 5784 - 5665
Alignment:
Q  109 tgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    |||||| ||||| |||||||||| || ||||  ||||||||||| ||||||||||||||||||| |||| ||||||||||| |||||||||||||| |||    
T  5784 tgatagcaggtggcccaatggattttgaagaggctctgataccatcttagaaatcgtggttgggtctaacacaaccccacaaaaccggcttgtaagatga 5685  T
Q  208 tgattgtccccacatataaa 227  Q
     ||||  |||||| ||||||    
T  5684 ggattacccccacttataaa 5665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 56555 - 56483
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattg 213  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  56555 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattg 56483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 288657 - 288732
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaat 228  Q
    |||||||||| ||||||||||||| ||||| ||||| |||| |||||| |||||| |||||  |||| ||||||||    
T  288657 cttagaaatcatggttgggcctaacacaactccacaaaaccagcttgtgaggtgaggattgcgcccagatataaat 288732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 3459 - 3545
Alignment:
Q  142 ctctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||||||  |||||||||||| ||||| |||| ||||||||||| ||||||||||| |||||| |||||||||||| ||||||    
T  3459 ctctgataccatattagaaatcgtgattgggtctaacacaaccccacaaaaccggcttgtgaggtgaagattgtccccacttataaa 3545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 218
Target Start/End: Complemental strand, 4011 - 3864
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||| |||||||| ||||||||||||   |||  |||||| ||||| |||| ||||||||  |||   ||||||||||  |||||||| |||||||     
T  4011 gtggacacaaatgatgggtggcccgatagcggaaacctgatagcaggtggcccagtggatcttggagaggatctgataccatattagaaattgtggttgt 3912  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccc 218  Q
    |||||| ||||||||||| ||| ||||||| |||||| ||||| ||||    
T  3911 gcctaacacaaccccacaaaactggcttgtgaggtgaggattgccccc 3864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 218
Target Start/End: Complemental strand, 4655 - 4508
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgg 171  Q
    ||||||| |||||||| ||||||||||||   |||  |||||| ||||| |||| ||||||||  |||   ||||||||||  |||||||| |||||||     
T  4655 gtggacacaaatgatgggtggcccgatagcggaaacctgatagcaggtggcccagtggatcttggagaggatctgataccatattagaaattgtggttgt 4556  T
Q  172 gcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtcccc 218  Q
    |||||| ||||||||||| ||| ||||||| |||||| ||||| ||||    
T  4555 gcctaacacaaccccacaaaactggcttgtgaggtgaggattgccccc 4508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 6355 - 6284
Alignment:
Q  157 agaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||||||||||||||| ||||||||||| || |||||||| |||||| ||||| |||||| ||||||    
T  6355 agaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaa 6284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 227
Target Start/End: Original strand, 4431 - 4503
Alignment:
Q  156 tagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||||||| |||||| |||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  4431 tagaaatcatggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 4503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 228
Target Start/End: Complemental strand, 12776 - 12656
Alignment:
Q  109 tgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtga 207  Q
    |||||| ||||| ||||||  |||||  ||| || || |||||| |||| |||| |||||||||||||| |||||| |||| || || ||||| ||||||    
T  12776 tgatagtaggtggcccaatttatcttggagagacgctaataccatcttaaaaattgtggttgggcctaacacaaccacacaaaatcgacttgtgaggtga 12677  T
Q  208 tgattgtccccacatataaat 228  Q
     ||||| ||||||||||||||    
T  12676 ggattgcccccacatataaat 12656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 21023 - 20964
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgatt 212  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||||||| |||||| ||||    
T  21023 cttagaaatcgtggttgggcttaacacaaccccacaaaaccggcttgtgaggtgaggatt 20964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 41160 - 41241
Alignment:
Q  108 ttgataggaggtgacccaatggatcttaaagaaactctgataccaacttagaaatcgtggttgggcctaa-acaaccccaca 188  Q
    ||||||| ||||| ||||||| |||||  |||  ||||||||||| |||||||||||| |||| |||||| |||||||||||    
T  41160 ttgatagcaggtggcccaatgaatcttggagaggctctgataccatcttagaaatcgtagttgagcctaatacaaccccaca 41241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 5795 - 5727
Alignment:
Q  72 gtggacataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaa 140  Q
    |||||||||||||||  ||||| ||||||  ||||| |||||| |||||||||||| |||||| |||||    
T  5795 gtggacataaatgataggtggctcgatagcgaaaatctgatagcaggtgacccaatagatcttgaagaa 5727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 51435 - 51359
Alignment:
Q  76 acataaatgatgagtggcccgatagtcaaaatttgataggaggtgacccaatggatcttaaagaaactctgatacca 152  Q
    |||||||||||  |||||||||||||  |||  |||||| ||| |||||||||||||||  |||| |||||||||||    
T  51435 acataaatgataggtggcccgatagtagaaacctgatagcaggagacccaatggatcttggagaagctctgatacca 51359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 227
Target Start/End: Complemental strand, 51330 - 51246
Alignment:
Q  144 ctgataccaacttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    ||||||||| ||||||||| ||| ||| || ||| ||||||||||| ||| | ||||| |||||| ||||| |||||| ||||||    
T  51330 ctgataccatcttagaaattgtgattgagcataacacaaccccacaaaactgacttgtgaggtgaggattgcccccacttataaa 51246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 89553 - 89627
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggtgatgattgtccccacatataaa 227  Q
    |||| |||| |||||||| ||||| |||||| |||| ||||| ||||||||||||  ||||||||||| ||||||    
T  89553 cttaaaaattgtggttggacctaacacaacctcacaaaaccgacttgtaaggtgaatattgtccccacttataaa 89627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 347571 - 347623
Alignment:
Q  154 cttagaaatcgtggttgggcctaa-acaaccccacacaaccggcttgtaaggt 205  Q
    ||||||| |||| ||||||||||| ||||||||||| ||||||||||| ||||    
T  347571 cttagaattcgtagttgggcctaatacaaccccacaaaaccggcttgtgaggt 347623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University