View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14223_low_22 (Length: 219)
Name: NF14223_low_22
Description: NF14223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14223_low_22 |
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Alignment Details
Target: chr3 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 16 - 200
Target Start/End: Complemental strand, 35755512 - 35755328
Alignment:
| Q |
16 |
cattagctacatatttcccctctctaaagtgtgagaacataaaatacaattggtcttagcccaatcggtgcagtttctccatcttcttctaaacctccaa |
115 |
Q |
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| T |
35755512 |
cattagctacatatttcccctctctaaagtgtgagaacataaaatacaattggtcttagcccaatcggcgcagtttctccatcttcttctaaacctccaa |
35755413 |
T |
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| Q |
116 |
ggaaccaaattttcctcgtcatcgtatgctaacacaccactacttgtgaatcctctttatctagagttttcttcaacacatctct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |
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| T |
35755412 |
ggaaccaaattttcctcgtcatcgtatgctaacacaccactacttgagaatcctctttatctagagttttcttcaacatatctct |
35755328 |
T |
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