View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14224_low_1 (Length: 1006)

Name: NF14224_low_1
Description: NF14224
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14224_low_1
NF14224_low_1
[»] chr8 (8 HSPs)
chr8 (16-982)||(30578817-30579791)
chr8 (695-787)||(19294054-19294146)
chr8 (487-551)||(42855029-42855093)
chr8 (484-564)||(36566244-36566324)
chr8 (709-804)||(41445058-41445154)
chr8 (921-956)||(4033104-4033139)
chr8 (760-901)||(13984112-13984255)
chr8 (482-564)||(36544349-36544430)
[»] chr5 (10 HSPs)
chr5 (709-819)||(43558546-43558657)
chr5 (484-563)||(27157-27237)
chr5 (709-814)||(3301280-3301386)
chr5 (709-814)||(3394142-3394248)
chr5 (914-975)||(37124200-37124261)
chr5 (484-564)||(20318190-20318270)
chr5 (921-956)||(1274902-1274937)
chr5 (327-378)||(22832091-22832142)
chr5 (936-983)||(35685507-35685554)
chr5 (914-956)||(20318621-20318663)
[»] chr7 (13 HSPs)
chr7 (487-564)||(32629810-32629887)
chr7 (692-807)||(36870041-36870155)
chr7 (484-551)||(36870340-36870407)
chr7 (484-564)||(39907382-39907462)
chr7 (484-564)||(46356854-46356934)
chr7 (484-551)||(22346711-22346778)
chr7 (921-956)||(11593597-11593632)
chr7 (321-379)||(32483504-32483560)
chr7 (484-551)||(36651193-36651260)
chr7 (484-551)||(38896816-38896883)
chr7 (486-544)||(11593154-11593212)
chr7 (709-779)||(32630039-32630109)
chr7 (484-541)||(48055842-48055899)
[»] chr3 (11 HSPs)
chr3 (750-842)||(19757456-19757549)
chr3 (750-980)||(19736638-19736862)
chr3 (710-807)||(29816937-29817035)
chr3 (904-980)||(19757688-19757764)
chr3 (484-564)||(52138027-52138107)
chr3 (484-551)||(51448725-51448792)
chr3 (316-365)||(38849125-38849174)
chr3 (914-968)||(32490322-32490376)
chr3 (784-842)||(48221288-48221346)
chr3 (915-968)||(48221415-48221468)
chr3 (484-564)||(50630324-50630402)
[»] chr2 (9 HSPs)
chr2 (709-816)||(13148753-13148861)
chr2 (692-843)||(14769715-14769865)
chr2 (692-807)||(24584358-24584472)
chr2 (484-551)||(2609727-2609794)
chr2 (484-551)||(452632-452699)
chr2 (921-980)||(4807229-4807288)
chr2 (921-968)||(8180417-8180464)
chr2 (316-379)||(13148345-13148408)
chr2 (487-542)||(45368651-45368706)
[»] chr1 (13 HSPs)
chr1 (709-843)||(37463578-37463713)
chr1 (709-819)||(35829133-35829244)
chr1 (484-564)||(8671117-8671197)
chr1 (484-550)||(29173546-29173612)
chr1 (748-817)||(7813965-7814035)
chr1 (786-894)||(34827766-34827875)
chr1 (708-764)||(13027297-13027353)
chr1 (920-980)||(37463451-37463511)
chr1 (484-564)||(43241384-43241464)
chr1 (921-980)||(1210382-1210441)
chr1 (692-814)||(32083490-32083611)
chr1 (485-564)||(32405467-32405545)
chr1 (902-955)||(52740077-52740130)
[»] chr6 (12 HSPs)
chr6 (487-564)||(9705977-9706054)
chr6 (327-564)||(20428640-20428885)
chr6 (709-901)||(5258807-5259001)
chr6 (710-842)||(20428354-20428487)
chr6 (487-564)||(5260251-5260328)
chr6 (709-816)||(26291212-26291321)
chr6 (484-564)||(6082599-6082679)
chr6 (709-816)||(30670319-30670427)
chr6 (921-956)||(33495844-33495879)
chr6 (484-550)||(2681453-2681519)
chr6 (321-378)||(9369590-9369647)
chr6 (923-956)||(9706415-9706448)
[»] scaffold0113 (2 HSPs)
scaffold0113 (487-550)||(13275-13338)
scaffold0113 (710-800)||(12351-12442)
[»] chr4 (10 HSPs)
chr4 (709-821)||(17666763-17666876)
chr4 (484-564)||(23907305-23907385)
chr4 (484-544)||(39707663-39707723)
chr4 (484-564)||(435431-435511)
chr4 (484-564)||(48623530-48623610)
chr4 (484-564)||(53703809-53703889)
chr4 (709-807)||(1212059-1212158)
chr4 (921-980)||(47265790-47265849)
chr4 (921-956)||(53707431-53707466)
chr4 (923-980)||(27450759-27450816)
[»] scaffold0018 (1 HSPs)
scaffold0018 (484-564)||(30667-30747)


Alignment Details
Target: chr8 (Bit Score: 695; Significance: 0; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 695; E-Value: 0
Query Start/End: Original strand, 16 - 982
Target Start/End: Complemental strand, 30579791 - 30578817
Alignment:
Q  16 gaaatgaagtgaatgaagttaggccaannnnnnn-gttagagt-agtctacgctaatgtctattgtcttcttcttgccgtgccggctcggctccttcaaa 113  Q
    |||||||| ||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30579791 gaaatgaaatgaatgaagttaggccaattttttttgttagagttagtctacgctaatgtctattgtcttcttcttgccgtgccggctcggctccttcaaa 30579692  T
Q  114 ctacttttannnnnnnnccttacaattagt---aacttaataaccataaa-tcaaataagagaaaattattaaattaattcagatttattagcatgaaaa 209  Q
    |||||||||        |||||||||||||   ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30579691 ctacttttattttttt-ccttacaattagtggaaacttaataaccataaaatcaaataagagaaaattattaaattaattcagatttattagcataaaaa 30579593  T
Q  210 gccatgatgcataagaccaaaaaggcattaatttgtgatgaaaaaattactattaatatttataagaaaattactatataatttaagatgttatcctaag 309  Q
    | |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30579592 gacatgatgcataagaccaaaaagacattaatttgtgatgaaaaaaatactattaatatttataagaaaattactatataatttaagatgttatcctaag 30579493  T
Q  310 ata-----tcagaatgaaacttatgagtcataccatgaagttatgcgaacgagtgattgaatggatactaagaaacggga-----gttacttattaccaa 399  Q
    |||     ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||     |||||||||||||||    
T  30579492 atactacatcagaatgaaacttatgagtcataccacgaagttatccgaacgagtgattgaatggatactaagaaacgggacttgagttacttattaccaa 30579393  T
Q  400 tttagttttatgcttgggacgttgaccatgaaatcgatctactcactatgacatgtgatggagtgatat---atagaacaaacttatttgcacttagttt 496  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||| |||||||||||||||    
T  30579392 tttagttttatgcttgagacgttgaccatgaaatcgatctactcactatgacatgtgatggagtgatatcagatagaacaaactgatttgcacttagttt 30579293  T
Q  497 taattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaattagtcagcttacttttattccaactataaaa 596  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30579292 taattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaattagtctgcttacttttattccaactataaaa 30579193  T
Q  597 ggatatgtttgagggagactcgaccagtgtgaggatgcaagatggagtcatcgacgattttctcacaaccatataattttacc-aaggagtctttaatct 695  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  30579192 ggatgtgtttgagggagactcgaccagtgtgaggatgcaagatggagtcatcgacgattttctcacaaccatataattttaccaaaggagtctttaattt 30579093  T
Q  696 ttttacttttagtttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttcttg-agagtcga 794  Q
    ||||   |||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  30579092 tttttactttagttttttgatgtacttacagaacacatacaagagctagcactgagatgtttgctttttgaagatggtgtagtccttcttgaagagtcga 30578993  T
Q  795 gggaggaattgaattggaggttggatatttgaggacaagccttagaag-ttatgactttggactgattaaaaggaagacaaagtataaggaatgcaactt 893  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30578992 gggaggaattgaattggaggttggatatttggggacaagccttagaagcttatgactttggactgattaaaaggaagacaaagtataaggaatgcaactt 30578893  T
Q  894 ctgcaaaaatgcaaaatgcaaagtatttctaccttggagatgaaagttgaagatcatatcatattacaagttacatagtttatatatat 982  Q
    |||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||    
T  30578892 ctgcaaaaatgcaaaatgcaaagtatttctaccttgg-------------agatcatatcatattacaagttacatagtttatatatat 30578817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 695 - 787
Target Start/End: Complemental strand, 19294146 - 19294054
Alignment:
Q  695 tttttacttttagtttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttcttga 787  Q
    |||||||||||||||||||||| |||||||| |||| |||||| || || | ||||||| |   || |||| |||||||| ||||||||||||    
T  19294146 tttttacttttagtttttggatttacttacataacatatacaaaagttaacactgagatatacactctttgcagatgatgtagtccttcttga 19294054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 42855093 - 42855029
Alignment:
Q  487 cacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagc 551  Q
    ||||||||||| ||| |||||||||||||  || |||||||||||||||| ||||||| ||||||    
T  42855093 cacttagttttcattgatttggagaaggcatatgatagagtgcctagagatattttgtggaaagc 42855029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 484 - 564
Target Start/End: Complemental strand, 36566324 - 36566244
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    |||||||||||||| ||| ||||||| |||||| || |||||||  | ||||||||||||| |||||| ||  ||||||||    
T  36566324 ttgcacttagttttcattgatttggaaaaggcgtatgatagagtatcgagagagattttgtggaaagccctggagaagaaa 36566244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 709 - 804
Target Start/End: Complemental strand, 41445154 - 41445058
Alignment:
Q  709 ttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttctt-gagagtcgagggaggaatt 804  Q
    ||||||||||| ||||  ||||||| ||| ||||| | | ||||||| |  |||||| |||||||| |||||| ||| |||||||||||||||||||    
T  41445154 ttttggatgtaattacgaaacacatccaaaagctagcaccgagatgtctattttttgtagatgatgtagtcctacttggagagtcgagggaggaatt 41445058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 921 - 956
Target Start/End: Complemental strand, 4033139 - 4033104
Alignment:
Q  921 tctaccttggagatgaaagttgaagatcatatcata 956  Q
    |||||||||||||||||||||| |||||||||||||    
T  4033139 tctaccttggagatgaaagttggagatcatatcata 4033104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 760 - 901
Target Start/End: Original strand, 13984112 - 13984255
Alignment:
Q  760 tttttgaagatgatgcagtccttctt-gagagtcgagggaggaattgaattggaggttggatatttgaggacaagccttagaagt-tatgactttggact 857  Q
    |||||| |||||| | |||||| ||| |||||||||||||| |||||||| | | ||| || | |||  |||||||||||||||| ||||||||  |  |    
T  13984112 tttttgcagatgaagtagtcctgctttgagagtcgagggagaaattgaatggaaagttagagacttggagacaagccttagaagtgtatgacttccgcat 13984211  T
Q  858 gattaaaaggaagacaaagtataaggaatgcaacttctgcaaaa 901  Q
    || || ||| |||||| |||||| |||||| |||||| ||||||    
T  13984212 gagtagaagcaagacagagtatatggaatgtaacttcagcaaaa 13984255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 482 - 564
Target Start/End: Original strand, 36544349 - 36544430
Alignment:
Q  482 atttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    |||||||||||||||| ||| ||||||| |||||| || ||||||| || ||| ||||||||| |||||| ||  ||||||||    
T  36544349 atttgcacttagttttcattgatttgga-aaggcgtatgatagagtaccgagatagattttgtggaaagccctggagaagaaa 36544430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 7e-18; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 709 - 819
Target Start/End: Complemental strand, 43558657 - 43558546
Alignment:
Q  709 ttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttctt-gagagtcgagggaggaattgaa 807  Q
    |||||||||||||||| |||||||| ||||||||| | | ||||| | ||| ||||| |||||||| |||||||||| |||||| |||||||||||| ||    
T  43558657 ttttggatgtacttacggaacacatccaagagctaacaccgagatatatgcgttttgtagatgatgtagtccttcttggagagttgagggaggaatttaa 43558558  T
Q  808 ttggaggttgga 819  Q
    | ||| ||||||    
T  43558557 tgggatgttgga 43558546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 484 - 563
Target Start/End: Original strand, 27157 - 27237
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagaga-ttttgtcgaaagcactaaagaagaa 563  Q
    |||||||||||||| ||| ||||||||||||||||| ||||| | |||| ||||| ||||||||||||| ||| |||||||    
T  27157 ttgcacttagttttcattgatttggagaaggcgaatgatagatttcctaaagagatttttgtcgaaagccctagagaagaa 27237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 709 - 814
Target Start/End: Original strand, 3301280 - 3301386
Alignment:
Q  709 ttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttctt-gagagtcgagggaggaattgaa 807  Q
    ||||||||||||| ||||||||||| |||||| || | | ||||||| ||||||||| |||||||||| || | ||| | |||| |||||||||||| ||    
T  3301280 ttttggatgtactgacagaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgcaatcttgcttggtgagttgagggaggaattaaa 3301379  T
Q  808 ttggagg 814  Q
    | |||||    
T  3301380 tgggagg 3301386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 709 - 814
Target Start/End: Original strand, 3394142 - 3394248
Alignment:
Q  709 ttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttctt-gagagtcgagggaggaattgaa 807  Q
    ||||||||||||| || |||||||| |||||| || | | ||||||| ||||||||| ||||||||||||| | ||| | |||||||||||||| || ||    
T  3394142 ttttggatgtactgacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgcagtcttgcttggtgagtcgagggaggagttaaa 3394241  T
Q  808 ttggagg 814  Q
    | |||||    
T  3394242 tgggagg 3394248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 914 - 975
Target Start/End: Original strand, 37124200 - 37124261
Alignment:
Q  914 aagtatttctaccttggagatgaaagttgaagatcatatcatattacaagttacatagttta 975  Q
    ||||||||||||||| ||| ||||||||| |||||| ||||||  ||||||||||| |||||    
T  37124200 aagtatttctaccttagaggtgaaagttggagatcaaatcatacaacaagttacattgttta 37124261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 484 - 564
Target Start/End: Original strand, 20318190 - 20318270
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    |||||||||||||| ||| ||||||| |||||| || ||||||| ||  |||||||||||| |||||| ||  ||||||||    
T  20318190 ttgcacttagttttcattaatttggaaaaggcgtatgatagagtaccgggagagattttgtggaaagccctggagaagaaa 20318270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 921 - 956
Target Start/End: Original strand, 1274902 - 1274937
Alignment:
Q  921 tctaccttggagatgaaagttgaagatcatatcata 956  Q
    |||||||||||||||||||||| |||||||||||||    
T  1274902 tctaccttggagatgaaagttggagatcatatcata 1274937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 327 - 378
Target Start/End: Complemental strand, 22832142 - 22832091
Alignment:
Q  327 atgagtcataccatgaagttatgcgaacgagtgattgaatggatactaagaa 378  Q
    ||||||||||||||||||||||| |||  |||||||||||| | ||||||||    
T  22832142 atgagtcataccatgaagttatgggaaaaagtgattgaatgaagactaagaa 22832091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 936 - 983
Target Start/End: Original strand, 35685507 - 35685554
Alignment:
Q  936 aaagttgaagatcatatcatattacaagttacatagtttatatatatt 983  Q
    ||||||||||| |||||||||| |||||| |||||||||| |||||||    
T  35685507 aaagttgaagagcatatcatatcacaagtaacatagtttaaatatatt 35685554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 914 - 956
Target Start/End: Original strand, 20318621 - 20318663
Alignment:
Q  914 aagtatttctaccttggagatgaaagttgaagatcatatcata 956  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||    
T  20318621 aagtagttctaccttggaggtgaaagttggagatcatatcata 20318663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 1e-16; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 487 - 564
Target Start/End: Original strand, 32629810 - 32629887
Alignment:
Q  487 cacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    ||||||||||| ||| |||||||||||||| || ||||||| |||||||||||||||| |||||| || |||||||||    
T  32629810 cacttagttttcattgatttggagaaggcgtatgatagagtacctagagagattttgtggaaagccctgaagaagaaa 32629887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 692 - 807
Target Start/End: Complemental strand, 36870155 - 36870041
Alignment:
Q  692 atctttttacttttagtttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttctt-gagag 790  Q
    ||||||||||||| |||||| ||||||||| || |||||||| ||||||||| | | ||||||| ||||||||| |||||||| |||| | ||| | |||    
T  36870155 atctttttacttt-agtttt-ggatgtactgacggaacacatccaagagctagcaccgagatgtatgctttttgcagatgatgtagtcttgcttggtgag 36870058  T
Q  791 tcgagggaggaattgaa 807  Q
    |||||||||||||||||    
T  36870057 tcgagggaggaattgaa 36870041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 484 - 551
Target Start/End: Complemental strand, 36870407 - 36870340
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagc 551  Q
    ||||||||| |||| ||| |||||||||||||| || |||||||||||||||||||||||| ||||||    
T  36870407 ttgcacttaattttcattgatttggagaaggcgtatgatagagtgcctagagagattttgtggaaagc 36870340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 564
Target Start/End: Complemental strand, 39907462 - 39907382
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    |||||||||||||| ||| ||||||| |||||| || ||||||| || ||||||||||||| |||||| ||  ||||||||    
T  39907462 ttgcacttagttttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgtggaaagccctggagaagaaa 39907382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 564
Target Start/End: Complemental strand, 46356934 - 46356854
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    |||||||||||||| ||| ||||||| |||||| || ||||||| || ||||||||||||| |||||| ||  ||||||||    
T  46356934 ttgcacttagttttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgtggaaagccctggagaagaaa 46356854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 484 - 551
Target Start/End: Original strand, 22346711 - 22346778
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagc 551  Q
    |||||||||||||| ||| ||||||| |||||| || ||||||| || ||||||||||||| ||||||    
T  22346711 ttgcacttagttttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgtggaaagc 22346778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 921 - 956
Target Start/End: Original strand, 11593597 - 11593632
Alignment:
Q  921 tctaccttggagatgaaagttgaagatcatatcata 956  Q
    |||||||||||| |||||||||||||||||||||||    
T  11593597 tctaccttggaggtgaaagttgaagatcatatcata 11593632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 32483504 - 32483560
Alignment:
Q  321 aaacttatgagtcataccatgaagttatgcgaacgagtgattgaatggatactaagaaa 379  Q
    |||||||||| ||| |||||||||||||| ||  ||||||||||||||| |||||||||    
T  32483504 aaacttatgaatcacaccatgaagttatgaga--gagtgattgaatggagactaagaaa 32483560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 551
Target Start/End: Original strand, 36651193 - 36651260
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagc 551  Q
    |||||||||||||| ||| ||||||| |||||| || ||||||| || |||||||||| || ||||||    
T  36651193 ttgcacttagttttcattgatttggaaaaggcgtatgatagagtaccgagagagatttcgtggaaagc 36651260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 551
Target Start/End: Original strand, 38896816 - 38896883
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagc 551  Q
    |||||||||||||| ||| ||||||| |||| | || ||||||| || ||||||||||||| ||||||    
T  38896816 ttgcacttagttttcattaatttggaaaaggtgtatgatagagtaccgagagagattttgtggaaagc 38896883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 486 - 544
Target Start/End: Original strand, 11593154 - 11593212
Alignment:
Q  486 gcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgt 544  Q
    |||||||||||| ||| ||||||| |||||| || ||||||| || |||||||||||||    
T  11593154 gcacttagttttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgt 11593212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 709 - 779
Target Start/End: Original strand, 32630039 - 32630109
Alignment:
Q  709 ttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtc 779  Q
    ||||||||||||| || |||||||| |||||| || | | ||||||| ||||||||| |||||||| ||||    
T  32630039 ttttggatgtactaacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 32630109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 484 - 541
Target Start/End: Complemental strand, 48055899 - 48055842
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattt 541  Q
    |||||||||||||| ||| ||| ||||||||||  | |||||||||||| ||||||||    
T  48055899 ttgcacttagttttcattgattcggagaaggcgtgtgatagagtgcctaaagagattt 48055842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 1e-16; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 750 - 842
Target Start/End: Original strand, 19757456 - 19757549
Alignment:
Q  750 agatgtttgctttttgaagatgatgcagtccttcttg-agagtcgagggaggaattgaattggaggttggatatttgaggacaagccttagaag 842  Q
    |||||| ||||||||| ||||||||||||||| |||| ||||| |||||||||||||||| ||||||| || | |||  |||||||||||||||    
T  19757456 agatgtatgctttttgcagatgatgcagtcctgcttggagagttgagggaggaattgaatgggaggttagagacttggagacaagccttagaag 19757549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 750 - 980
Target Start/End: Original strand, 19736638 - 19736862
Alignment:
Q  750 agatgtttgctttttgaagatgatgcagtccttctt-gagagtcgagggaggaattgaattggaggttggatatttgaggacaagccttagaagt-tatg 847  Q
    |||||| ||||||||| ||||||||||||||| ||| |||||| |||||||||||||||| |||| || || | ||   |||||||||||||||| ||||    
T  19736638 agatgtatgctttttgcagatgatgcagtcctgcttggagagttgagggaggaattgaatgggagattagagacttagagacaagccttagaagtgtatg 19736737  T
Q  848 actttggactgattaaaaggaagacaaagtataaggaatgcaacttctgcaaaaatgcaaaatgcaaagtatttctaccttggagatgaaagttgaagat 947  Q
     | |  | || | || ||| |||||| |||||| |||||| ||||||         |||||| ||| |||| | ||||||||||| ||||||||| ||||    
T  19736738 gcatccgccttagtagaagcaagacagagtatatggaatgtaacttc--------agcaaaaggcagagtagtcctaccttggaggtgaaagttggagat 19736829  T
Q  948 catatcatattacaagttacatagtttatatat 980  Q
    |||||||||   |||||||||| ||||| ||||    
T  19736830 catatcataccccaagttacatggtttaaatat 19736862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 710 - 807
Target Start/End: Original strand, 29816937 - 29817035
Alignment:
Q  710 tttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttctt-gagagtcgagggaggaattgaa 807  Q
    |||||||||||||||| ||||||| | |||| || | | ||||||| || |||||||||||||| ||||||| ||| ||||||| ||||| ||||||||    
T  29816937 tttggatgtacttacaaaacacatcctagagttagcaccgagatgtatgttttttgaagatgatacagtcctacttggagagtcaagggatgaattgaa 29817035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 904 - 980
Target Start/End: Original strand, 19757688 - 19757764
Alignment:
Q  904 gcaaaatgcaaagtatttctaccttggagatgaaagttgaagatcatatcatattacaagttacatagtttatatat 980  Q
    |||||| |||||||| | ||||||||||| ||||||||| |||||||||||||   |||||||||| ||||| ||||    
T  19757688 gcaaaaggcaaagtagtcctaccttggaggtgaaagttggagatcatatcataccccaagttacatggtttaaatat 19757764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 564
Target Start/End: Original strand, 52138027 - 52138107
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    |||||||||||||| ||| ||||||| |||||| || ||||||| || ||||||||||||| |||||| ||  ||||||||    
T  52138027 ttgcacttagttttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgtggaaagccctggagaagaaa 52138107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 484 - 551
Target Start/End: Complemental strand, 51448792 - 51448725
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagc 551  Q
    |||||||||||||| ||| ||||||| |||||| || ||||||| || ||||||||||||| ||||||    
T  51448792 ttgcacttagttttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgtggaaagc 51448725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 365
Target Start/End: Original strand, 38849125 - 38849174
Alignment:
Q  316 gaatgaaacttatgagtcataccatgaagttatgcgaacgagtgattgaa 365  Q
    |||| ||||| ||||||||||||||||||||||| ||| |||||||||||    
T  38849125 gaattaaactaatgagtcataccatgaagttatgggaaagagtgattgaa 38849174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 914 - 968
Target Start/End: Complemental strand, 32490376 - 32490322
Alignment:
Q  914 aagtatttctaccttggagatgaaagttgaagatcatatcatattacaagttaca 968  Q
    |||| |||||| |||  ||||||||||||||||||||||||||  ||||||||||    
T  32490376 aagtgtttctaacttatagatgaaagttgaagatcatatcataccacaagttaca 32490322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 784 - 842
Target Start/End: Original strand, 48221288 - 48221346
Alignment:
Q  784 ttgagagtcgagggaggaattgaattggaggttggatatttgaggacaagccttagaag 842  Q
    |||||||||||| |||||||||||| |||||||| | | |||  |||||||||||||||    
T  48221288 ttgagagtcgagagaggaattgaatgggaggttgaagacttggagacaagccttagaag 48221346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 915 - 968
Target Start/End: Original strand, 48221415 - 48221468
Alignment:
Q  915 agtatttctaccttggagatgaaagttgaagatcatatcatattacaagttaca 968  Q
    |||| ||||| ||| ||| |||||||||||||||||||||||  ||||||||||    
T  48221415 agtagttctatcttagaggtgaaagttgaagatcatatcataccacaagttaca 48221468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 484 - 564
Target Start/End: Complemental strand, 50630402 - 50630324
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    |||||||||||||| ||| |||||||||||||  ||   ||||||||| |||| ||||||| |||||| ||| ||||||||    
T  50630402 ttgcacttagttttcattgatttggagaaggc--atatgagagtgcctcgagatattttgtggaaagccctagagaagaaa 50630324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 4e-16; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 709 - 816
Target Start/End: Original strand, 13148753 - 13148861
Alignment:
Q  709 ttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttctt-gagagtcgagggaggaattgaa 807  Q
    ||||||||||||||||||||||||| ||||||||| | || |||||| ||| ||||| |||||||||||| |  ||| |||||||||  ||| |||||||    
T  13148753 ttttggatgtacttacagaacacatccaagagctagcactaagatgtatgcattttgtagatgatgcagttccgcttggagagtcgaatgagaaattgaa 13148852  T
Q  808 ttggaggtt 816  Q
    | |||||||    
T  13148853 tgggaggtt 13148861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 692 - 843
Target Start/End: Original strand, 14769715 - 14769865
Alignment:
Q  692 atctttttacttttagtttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttcttg-agag 790  Q
    ||||||||||||| |  |||||||||||||||||  |||||| ||||||||| | |  | |||| || |||||   ||||||| |||| | |||| ||||    
T  14769715 atctttttactttaa--ttttggatgtacttacatcacacattcaagagctagcaccaatatgtatgtttttttgcgatgatgtagtcatgcttggagag 14769812  T
Q  791 tcgagggaggaattgaattggaggttggatatttgaggacaagccttagaagt 843  Q
    |||||||| ||||| |||  ||||||||| | |||| ||||||||||||||||    
T  14769813 tcgagggacgaattcaatgagaggttggagacttgaagacaagccttagaagt 14769865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 692 - 807
Target Start/End: Complemental strand, 24584472 - 24584358
Alignment:
Q  692 atctttttacttttagtttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttctt-gagag 790  Q
    ||||||||||||| |||||| ||||||||| || |||||||| |||||| |||| | ||||||| || |||||| |||||||| |||| | ||| | |||    
T  24584472 atctttttacttt-agtttt-ggatgtactaacggaacacatccaagagttatcaccgagatgtatgttttttgcagatgatgtagtcttgcttggtgag 24584375  T
Q  791 tcgagggaggaattgaa 807  Q
    || ||||||||||||||    
T  24584374 tcaagggaggaattgaa 24584358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 484 - 551
Target Start/End: Original strand, 2609727 - 2609794
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagc 551  Q
    |||||||||||||| ||| ||||||| |||||| || |||||||||  ||||||||||||| ||||||    
T  2609727 ttgcacttagttttcattgatttggaaaaggcgtatgatagagtgctgagagagattttgtggaaagc 2609794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 551
Target Start/End: Complemental strand, 452699 - 452632
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagc 551  Q
    |||||||||||||| ||| ||||||| |||||| |  ||||||| || ||||||||||||| ||||||    
T  452699 ttgcacttagttttcattgatttggaaaaggcgtacgatagagtaccgagagagattttgtggaaagc 452632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 921 - 980
Target Start/End: Original strand, 4807229 - 4807288
Alignment:
Q  921 tctaccttggagatgaaagttgaagatcatatcatattacaagttacatagtttatatat 980  Q
    |||||||||||| ||||||||| |||||||||||||   ||||||||| |||||| ||||    
T  4807229 tctaccttggaggtgaaagttggagatcatatcataccccaagttacacagtttaaatat 4807288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 921 - 968
Target Start/End: Original strand, 8180417 - 8180464
Alignment:
Q  921 tctaccttggagatgaaagttgaagatcatatcatattacaagttaca 968  Q
    |||||||||||| ||||||||| ||||||||||||| | |||||||||    
T  8180417 tctaccttggaggtgaaagttggagatcatatcatactccaagttaca 8180464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 379
Target Start/End: Original strand, 13148345 - 13148408
Alignment:
Q  316 gaatgaaacttatgagtcataccatgaagttatgcgaacgagtgattgaatggatactaagaaa 379  Q
    |||| ||||| ||||||| ||||||||||||||| ||| | ||||||||||| | |||||||||    
T  13148345 gaattaaactaatgagtcttaccatgaagttatgggaaagggtgattgaatgaagactaagaaa 13148408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 45368706 - 45368651
Alignment:
Q  487 cacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagatttt 542  Q
    ||||||||||| ||| |||| ||||||||| || ||||||| ||||||||||||||    
T  45368706 cacttagttttcattgattttgagaaggcgtatgatagagtacctagagagatttt 45368651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 4e-16; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 709 - 843
Target Start/End: Complemental strand, 37463713 - 37463578
Alignment:
Q  709 ttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttcttga-gagtcgagggaggaattgaa 807  Q
    |||||||||| ||||| |||||||| |||||| || | | ||||||| ||||||||| |||||| | |||||| ||||| |||||||||| |||| ||||    
T  37463713 ttttggatgttcttacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgacgtagtcctgcttgaagagtcgagggtggaaatgaa 37463614  T
Q  808 ttggaggttggata-tttgaggacaagccttagaagt 843  Q
    | ||||||| || | ||||| ||||||||||||||||    
T  37463613 tgggaggttagagactttga-gacaagccttagaagt 37463578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 709 - 819
Target Start/End: Complemental strand, 35829244 - 35829133
Alignment:
Q  709 ttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttctt-gagagtcgagggaggaattgaa 807  Q
    ||||||||||||||||||||||||| ||||||||| | | || |||| |||||| || | | ||||  ||||| ||| |||||||||| |||||||||||    
T  35829244 ttttggatgtacttacagaacacatccaagagctagcaccgatatgtatgctttgtgcacaagatgtcgtcctgcttggagagtcgagagaggaattgaa 35829145  T
Q  808 ttggaggttgga 819  Q
    | ||||||||||    
T  35829144 tgggaggttgga 35829133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 484 - 564
Target Start/End: Original strand, 8671117 - 8671197
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    |||||||||||||| ||| ||||||| |||||| || ||||||| || ||||||||||||| |||||||||  ||||||||    
T  8671117 ttgcacttagttttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgtggaaagcactggagaagaaa 8671197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 484 - 550
Target Start/End: Complemental strand, 29173612 - 29173546
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaag 550  Q
    |||||||||||||| ||| |||||||||||||| || |||||||||| |||||| |||||| |||||    
T  29173612 ttgcacttagtttttattgatttggagaaggcgtatgatagagtgccgagagaggttttgtggaaag 29173546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 748 - 817
Target Start/End: Original strand, 7813965 - 7814035
Alignment:
Q  748 tgagatgtttgctttttgaagatgatgcagtccttctt-gagagtcgagggaggaattgaattggaggttg 817  Q
    |||||||| || |||||| |||||||| |||| | ||| ||||||||||||||||||||||| ||||||||    
T  7813965 tgagatgtatgttttttgcagatgatgtagtcatgcttcgagagtcgagggaggaattgaatgggaggttg 7814035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 786 - 894
Target Start/End: Complemental strand, 34827875 - 34827766
Alignment:
Q  786 gagagtcgagggaggaattgaattggaggttggatatttgaggacaagccttagaag-ttatgactttggactgattaaaaggaagacaaagtataagga 884  Q
    |||||||||| |||||||||||| ||||||| || | ||   |||||||||||||||  ||||||||| |||| | || ||  ||||||||||||| |||    
T  34827875 gagagtcgagagaggaattgaatgggaggttagagacttagagacaagccttagaagcctatgactttcgactaagtagaactaagacaaagtatatgga 34827776  T
Q  885 atgcaacttc 894  Q
    ||| ||||||    
T  34827775 atgtaacttc 34827766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 708 - 764
Target Start/End: Complemental strand, 13027353 - 13027297
Alignment:
Q  708 tttttggatgtacttacagaacacatacaagagctatccctgagatgtttgcttttt 764  Q
    ||||||||||||||||||||| |||| ||||||||| | ||||||||| || |||||    
T  13027353 tttttggatgtacttacagaaaacatccaagagctagcactgagatgtatgtttttt 13027297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 920 - 980
Target Start/End: Complemental strand, 37463511 - 37463451
Alignment:
Q  920 ttctaccttggagatgaaagttgaagatcatatcatattacaagttacatagtttatatat 980  Q
    ||||||||||||| ||||||||| ||||||||||||| | | ||||||| |||||| ||||    
T  37463511 ttctaccttggaggtgaaagttggagatcatatcatactccgagttacacagtttaaatat 37463451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 484 - 564
Target Start/End: Complemental strand, 43241464 - 43241384
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    |||||||||||||| ||| ||||||| ||| || || ||||||| || ||||||||||||| |||||| ||  ||||||||    
T  43241464 ttgcacttagttttcattgatttggaaaagacgtatgatagagtaccgagagagattttgtggaaagctctggagaagaaa 43241384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 921 - 980
Target Start/End: Original strand, 1210382 - 1210441
Alignment:
Q  921 tctaccttggagatgaaagttgaagatcatatcatattacaagttacatagtttatatat 980  Q
    |||||||||||| ||||||||| |||||||||||||   ||||||||| |||||| ||||    
T  1210382 tctaccttggaggtgaaagttggagatcatatcataccccaagttacacagtttaaatat 1210441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 692 - 814
Target Start/End: Complemental strand, 32083611 - 32083490
Alignment:
Q  692 atctttttacttttagtttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttctt-gagag 790  Q
    ||||||||||||| |||||| ||||||||| ||||||||||| |||||| || | | ||||||| ||||||||| | |||||| | || | ||| | |||    
T  32083611 atctttttacttt-agtttt-ggatgtactgacagaacacatccaagagttagcaccgagatgtatgctttttgcaaatgatgtaatcttgcttggtgag 32083514  T
Q  791 tcgagggaggaattgaattggagg 814  Q
    ||||||||||| || ||| |||||    
T  32083513 tcgagggaggagttaaatgggagg 32083490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 564
Target Start/End: Complemental strand, 32405545 - 32405467
Alignment:
Q  485 tgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    ||||||||||||| ||| ||||||| ||| || || |||||||| ||||||||||||||| ||||||  || ||||||||    
T  32405545 tgcacttagttttcattgatttggaaaag-cgtatgatagagtgtctagagagattttgtggaaagccatagagaagaaa 32405467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 902 - 955
Target Start/End: Complemental strand, 52740130 - 52740077
Alignment:
Q  902 atgcaaaatgcaaagtatttctaccttggagatgaaagttgaagatcatatcat 955  Q
    ||||||||| ||||||| |||||| | | |||||||||||| ||||||||||||    
T  52740130 atgcaaaatacaaagtagttctacatcgaagatgaaagttggagatcatatcat 52740077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 487 - 564
Target Start/End: Original strand, 9705977 - 9706054
Alignment:
Q  487 cacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    ||||||||||| ||| |||||||||||||| || ||||||| |||||||||||||||| |||||| ||  ||||||||    
T  9705977 cacttagttttcattgatttggagaaggcgtatgatagagtacctagagagattttgtggaaagccctgtagaagaaa 9706054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 327 - 564
Target Start/End: Complemental strand, 20428885 - 20428640
Alignment:
Q  327 atgagtcataccatgaagttatgcgaacgagtgattgaatggatactaagaaacggga-----gttacttattaccaatttagttttatgcttgggacgt 421  Q
    ||||||||||||||||||||||| ||| | || |||||| | | ||||||||  | ||     |||||  || |||||| | ||||||||||||||| ||    
T  20428885 atgagtcataccatgaagttatgggaaagggtaattgaacgaagactaagaacagagactcacgttacaaataaccaatatggttttatgcttgggaggt 20428786  T
Q  422 tgaccatgaaatcgatctactcactatgacatgtgatggagtgatat---atagaacaaacttatttgcacttagttttaattcatttggagaaggcgaa 518  Q
    |||| ||| || ||||||||| ||| |||| |||||||||| |||||   |  ||  |||   | || ||| ||||||| ||| ||||| |||||||| |    
T  20428785 tgactatggaagcgatctacttactttgacgtgtgatggagcgatatcggacggataaaaaagacttacacctagttttcattgatttgtagaaggcgta 20428686  T
Q  519 tcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    | ||||||| |||||||||||||||| |||||| ||  ||||||||    
T  20428685 tgatagagtacctagagagattttgtggaaagccctggagaagaaa 20428640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 709 - 901
Target Start/End: Complemental strand, 5259001 - 5258807
Alignment:
Q  709 ttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttctt-gagagtcgagggaggaattgaa 807  Q
    ||||||||||||| || |||||||| |||||| || | | ||||||| ||||||||| |||||||| |||| | ||| | |||||||||||||| || ||    
T  5259001 ttttggatgtactgacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgaagtcttgcttggtgagtcgagggaggagttaaa 5258902  T
Q  808 ttggaggttggatatttgaggacaagccttagaag-ttatgactttggactgattaaaaggaagacaaagtataaggaatgcaacttctgcaaaa 901  Q
    | ||||| | || |  ||  | |||||||||||||  |||| |||  | |||| || ||| ||||||||||||| |||||| |||||| ||||||    
T  5258901 tgggaggctagagacctggaggcaagccttagaagcgtatggcttccgcctgagtagaagcaagacaaagtatatggaatgtaacttcagcaaaa 5258807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 710 - 842
Target Start/End: Complemental strand, 20428487 - 20428354
Alignment:
Q  710 tttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttctt-gagagtcgagggaggaattgaat 808  Q
    ||||||||||||||| |||||||| |||||| || | | ||||||| ||||||||| |||||||| |||| | ||| | ||||| |||||||| || |||    
T  20428487 tttggatgtacttacggaacacattcaagagttagcaccgagatgtatgctttttgcagatgatgtagtcttgcttggtgagtcaagggaggagttaaat 20428388  T
Q  809 tggaggttggatat-ttgaggacaagccttagaag 842  Q
     ||||| | ||||| | |||| |||||||||||||    
T  20428387 gggaggctagatatctagagg-caagccttagaag 20428354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 487 - 564
Target Start/End: Complemental strand, 5260328 - 5260251
Alignment:
Q  487 cacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    ||||||||||| ||  |||||||||||||| || ||||||| ||||||||||||| || |||||| ||| | ||||||    
T  5260328 cacttagttttcatcgatttggagaaggcgtatgatagagtacctagagagatttagtggaaagccctagaaaagaaa 5260251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 709 - 816
Target Start/End: Original strand, 26291212 - 26291321
Alignment:
Q  709 ttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttga-agatgatgcagtccttctt-gagagtcgagggaggaattga 806  Q
    ||||||||||| |||| |||||||| |||||| || | | | ||||| |||||||| | |||||||| |||||| ||| || |||||||||||||||||     
T  26291212 ttttggatgtatttacggaacacatccaagagttaacaccgtgatgtatgcttttttacagatgatgtagtcctgcttggaaagtcgagggaggaattgc 26291311  T
Q  807 attggaggtt 816  Q
    || |||||||    
T  26291312 atgggaggtt 26291321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 484 - 564
Target Start/End: Original strand, 6082599 - 6082679
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    |||||||||||||| ||| ||||||| |||| | || ||||||| || ||||||||||||| |||||| ||  ||||||||    
T  6082599 ttgcacttagttttcattgatttggaaaaggtgtatgatagagtaccgagagagattttgtggaaagccctggagaagaaa 6082679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 709 - 816
Target Start/End: Original strand, 30670319 - 30670427
Alignment:
Q  709 ttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttcttga-gagtcgagggaggaattgaa 807  Q
    |||||| |||||| || ||| |||| |||||| || |  |||||||| ||||||||| |||||||| |||| | ||||  ||||||||||||||||||||    
T  30670319 ttttgggtgtactgacggaatacatccaagagttagcattgagatgtatgctttttgcagatgatgtagtcttgcttggtgagtcgagggaggaattgaa 30670418  T
Q  808 ttggaggtt 816  Q
      |||||||    
T  30670419 cgggaggtt 30670427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 921 - 956
Target Start/End: Original strand, 33495844 - 33495879
Alignment:
Q  921 tctaccttggagatgaaagttgaagatcatatcata 956  Q
    |||||||||||| |||||||||||||||||||||||    
T  33495844 tctaccttggaggtgaaagttgaagatcatatcata 33495879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 484 - 550
Target Start/End: Complemental strand, 2681519 - 2681453
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaag 550  Q
    |||||||||||||| ||| |||||||||||||| || |||| ||| | |||||| |||||| |||||    
T  2681519 ttgcacttagttttcattgatttggagaaggcgtatgatagtgtgtcgagagaggttttgtagaaag 2681453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 378
Target Start/End: Complemental strand, 9369647 - 9369590
Alignment:
Q  321 aaacttatgagtcataccatgaagttatgcgaacgagtgattgaatggatactaagaa 378  Q
    |||||||| |||||| | |||||||| |||||| ||||||||||||| | ||||||||    
T  9369647 aaacttataagtcatgctatgaagttgtgcgaaagagtgattgaatgtagactaagaa 9369590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 923 - 956
Target Start/End: Original strand, 9706415 - 9706448
Alignment:
Q  923 taccttggagatgaaagttgaagatcatatcata 956  Q
    |||||||||||||||||||| |||||||||||||    
T  9706415 taccttggagatgaaagttggagatcatatcata 9706448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 13338 - 13275
Alignment:
Q  487 cacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaag 550  Q
    ||||||||||| ||| |||||||||||||| || ||||||| |||||||||||||||| |||||    
T  13338 cacttagttttcattgatttggagaaggcgtatgatagagttcctagagagattttgtggaaag 13275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 710 - 800
Target Start/End: Complemental strand, 12442 - 12351
Alignment:
Q  710 tttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttctt-gagagtcgagggagg 800  Q
    |||||||||| | ||||||||||| |||||| || | | ||||||| |||||||||||||||||| |||| | ||| | |||||||||||||    
T  12442 tttggatgtattgacagaacacattcaagagttagcaccgagatgtatgctttttgaagatgatgtagtcttgcttggtgagtcgagggagg 12351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000006; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 709 - 821
Target Start/End: Complemental strand, 17666876 - 17666763
Alignment:
Q  709 ttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttctt-gagagtcgagggaggaattgaa 807  Q
    ||||||||||||||||| ||||||| ||| | ||| | | ||||||| ||| ||||||| |||||| |||| |  || ||| ||||||| ||||||||||    
T  17666876 ttttggatgtacttacataacacatccaacaactagcaccgagatgtatgcattttgaatatgatgtagtcttaattggagtgtcgaggaaggaattgaa 17666777  T
Q  808 ttggaggttggata 821  Q
    ||||| ||||||||    
T  17666776 ttggatgttggata 17666763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 564
Target Start/End: Complemental strand, 23907385 - 23907305
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    |||||||||||||| ||| ||||||| |||||| || ||||||| || ||||||||||||| |||||| ||  ||||||||    
T  23907385 ttgcacttagttttcattgatttggaaaaggcgtatgatagagtaccaagagagattttgtggaaagccctggagaagaaa 23907305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 39707663 - 39707723
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgt 544  Q
    |||||||||||||| ||| ||||||||||| || || ||||||||||||||||| ||||||    
T  39707663 ttgcacttagttttcattgatttggagaagacgtatgatagagtgcctagagaggttttgt 39707723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 484 - 564
Target Start/End: Original strand, 435431 - 435511
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    |||||||||||||| ||| ||||||| ||| || || ||||||| || ||||||||||||| |||||| ||  ||||||||    
T  435431 ttgcacttagttttcattgatttggaaaagacgtatgatagagtaccgagagagattttgtggaaagccctggagaagaaa 435511  T

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Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 484 - 564
Target Start/End: Complemental strand, 48623610 - 48623530
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    |||||||||||||| ||| ||||||| |||| | || ||||||| || ||||||||||||| |||||| ||  ||||||||    
T  48623610 ttgcacttagttttcattgatttggaaaaggtgtatgatagagtaccgagagagattttgtggaaagccctggagaagaaa 48623530  T

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Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 484 - 564
Target Start/End: Original strand, 53703809 - 53703889
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    |||||||||||||| | | ||||||| |||||| || || |||| || ||||||||||||| |||||| || |||||||||    
T  53703809 ttgcacttagttttcactgatttggaaaaggcgtatgattgagtaccgagagagattttgtggaaagccctgaagaagaaa 53703889  T

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Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 709 - 807
Target Start/End: Complemental strand, 1212158 - 1212059
Alignment:
Q  709 ttttggatgtacttacagaacacatacaagagctatccctgagatgtttgctttttgaagatgatgcagtccttctt-gagagtcgagggaggaattgaa 807  Q
    ||||||||||||||||| |||||||  ||||| || | | ||||||| ||||||||| |||||||| |||| |  || | |||||||||||| |||||||    
T  1212158 ttttggatgtacttacataacacatctaagagttagcaccgagatgtatgctttttggagatgatgtagtcttgattggcgagtcgagggagaaattgaa 1212059  T

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Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 921 - 980
Target Start/End: Complemental strand, 47265849 - 47265790
Alignment:
Q  921 tctaccttggagatgaaagttgaagatcatatcatattacaagttacatagtttatatat 980  Q
    |||||||||||| ||||||||| || ||||||||||   |||||||||||||||| ||||    
T  47265849 tctaccttggaggtgaaagttggaggtcatatcataccccaagttacatagtttaaatat 47265790  T

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Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 921 - 956
Target Start/End: Original strand, 53707431 - 53707466
Alignment:
Q  921 tctaccttggagatgaaagttgaagatcatatcata 956  Q
    |||||||||||| |||||||||||||||||||||||    
T  53707431 tctaccttggaggtgaaagttgaagatcatatcata 53707466  T

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Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 923 - 980
Target Start/End: Complemental strand, 27450816 - 27450759
Alignment:
Q  923 taccttggagatgaaagttgaagatcatatcatattacaagttacatagtttatatat 980  Q
    |||||||||| ||||||||| |||||||||||||   ||||||||| |||||| ||||    
T  27450816 taccttggaggtgaaagttggagatcatatcataccccaagttacacagtttacatat 27450759  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 484 - 564
Target Start/End: Original strand, 30667 - 30747
Alignment:
Q  484 ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgtcgaaagcactaaagaagaaa 564  Q
    |||||||||||||| ||| | ||||| |||||| || ||||||| || ||||||||||||| |||||| |  |||||||||    
T  30667 ttgcacttagttttcattgaattggaaaaggcgtatgatagagtaccgagagagattttgtggaaagccccgaagaagaaa 30747  T

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