View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14224_low_10 (Length: 237)
Name: NF14224_low_10
Description: NF14224
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14224_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 16689905 - 16690122
Alignment:
| Q |
1 |
gctttataaaatctttcttggagatattatcatacatttatggaatattcatgnnnnnnntggttctgagacataattaattaataaccaagaatgagtg |
100 |
Q |
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| T |
16689905 |
gctttataaaatctttcttggagatattatcatacatttatggaatattcatgaaaaaaatggttctgagacataattaattaataaccaagaatgagtg |
16690004 |
T |
|
| Q |
101 |
catgattccaccttccccatgcacctcgacttaaattgaattgatgaataagcgttgatccattgatgaatgcaagattaacaatgtgatcttcaaaaaa |
200 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16690005 |
catgattacaccttccccatgcacctcgacttaaattgaattgatgaataagagttgatccattgatgaatgcaagattaacaatgtgatcttcaaaaaa |
16690104 |
T |
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| Q |
201 |
tgatgaagagaacgtaga |
218 |
Q |
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||||||||||||| |||| |
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| T |
16690105 |
tgatgaagagaacataga |
16690122 |
T |
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