View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14224_low_3 (Length: 390)

Name: NF14224_low_3
Description: NF14224
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14224_low_3
NF14224_low_3
[»] chr1 (47 HSPs)
chr1 (132-390)||(24646068-24646326)
chr1 (186-349)||(24745468-24745629)
chr1 (266-355)||(34459159-34459248)
chr1 (183-277)||(31844529-31844623)
chr1 (274-349)||(9527101-9527176)
chr1 (184-271)||(33468860-33468947)
chr1 (182-273)||(44305549-44305640)
chr1 (183-273)||(14727467-14727557)
chr1 (183-273)||(25007601-25007691)
chr1 (266-349)||(4642046-4642129)
chr1 (186-273)||(37153881-37153968)
chr1 (183-277)||(4774105-4774199)
chr1 (266-339)||(49898442-49898515)
chr1 (266-329)||(6802072-6802135)
chr1 (182-273)||(1428306-1428397)
chr1 (306-356)||(27584029-27584079)
chr1 (307-353)||(33468967-33469013)
chr1 (183-277)||(8239405-8239499)
chr1 (307-356)||(14727379-14727428)
chr1 (307-356)||(27460745-27460794)
chr1 (183-273)||(27460816-27460905)
chr1 (307-356)||(31844637-31844686)
chr1 (183-273)||(27583905-27583991)
chr1 (231-277)||(4641973-4642019)
chr1 (307-356)||(6331735-6331784)
chr1 (307-356)||(25011553-25011602)
chr1 (1-41)||(1077891-1077931)
chr1 (184-261)||(25011426-25011503)
chr1 (1-41)||(25275519-25275559)
chr1 (1-41)||(25382008-25382048)
chr1 (1-41)||(31051191-31051231)
chr1 (1-41)||(31057691-31057731)
chr1 (181-217)||(42817789-42817825)
chr1 (1-41)||(50305844-50305884)
chr1 (183-263)||(34459268-34459348)
chr1 (293-356)||(48940419-48940482)
chr1 (183-217)||(21973678-21973712)
chr1 (9-38)||(8093326-8093355)
chr1 (184-217)||(11647357-11647390)
chr1 (1-38)||(25387975-25388012)
chr1 (1-38)||(27954811-27954848)
chr1 (1-38)||(33458382-33458419)
chr1 (1-38)||(38152430-38152467)
chr1 (4-41)||(44409647-44409684)
chr1 (189-263)||(49898535-49898609)
chr1 (183-215)||(14201411-14201443)
chr1 (1-41)||(24927241-24927281)
[»] chr4 (49 HSPs)
chr4 (182-356)||(41972329-41972503)
chr4 (250-356)||(49745089-49745195)
chr4 (266-356)||(25237626-25237716)
chr4 (271-356)||(50099890-50099975)
chr4 (266-354)||(2521907-2521995)
chr4 (184-277)||(10058650-10058743)
chr4 (267-349)||(36947575-36947657)
chr4 (250-340)||(52373804-52373894)
chr4 (182-277)||(52373888-52373983)
chr4 (182-271)||(2017324-2017413)
chr4 (274-354)||(8901855-8901934)
chr4 (184-273)||(10715794-10715883)
chr4 (184-273)||(10929564-10929653)
chr4 (183-272)||(46645742-46645831)
chr4 (183-271)||(9003695-9003783)
chr4 (186-277)||(31364248-31364339)
chr4 (183-273)||(4552323-4552413)
chr4 (183-273)||(4728696-4728786)
chr4 (302-347)||(31929043-31929088)
chr4 (183-276)||(11826936-11827029)
chr4 (183-276)||(14044459-14044552)
chr4 (189-277)||(2521792-2521880)
chr4 (307-356)||(4728608-4728657)
chr4 (307-356)||(31364185-31364234)
chr4 (183-273)||(32006021-32006111)
chr4 (186-276)||(32828278-32828368)
chr4 (1-41)||(6257677-6257717)
chr4 (1-41)||(10733822-10733862)
chr4 (1-41)||(10739809-10739849)
chr4 (1-41)||(10947591-10947631)
chr4 (1-41)||(10953578-10953618)
chr4 (1-41)||(26972027-26972067)
chr4 (183-263)||(25237736-25237816)
chr4 (184-276)||(9694201-9694291)
chr4 (183-273)||(40969362-40969452)
chr4 (1-41)||(48160606-48160646)
chr4 (1-41)||(48166825-48166865)
chr4 (225-277)||(50100004-50100056)
chr4 (1-41)||(50168242-50168282)
chr4 (183-217)||(24974532-24974566)
chr4 (183-217)||(50384067-50384101)
chr4 (183-273)||(2576310-2576400)
chr4 (307-356)||(10058587-10058636)
chr4 (182-210)||(13968379-13968407)
chr4 (234-286)||(15034438-15034490)
chr4 (1-41)||(19686790-19686830)
chr4 (1-41)||(24287634-24287674)
chr4 (1-41)||(26957276-26957316)
chr4 (185-217)||(42843994-42844026)
[»] chr2 (44 HSPs)
chr2 (182-342)||(33909233-33909393)
chr2 (255-356)||(25562985-25563086)
chr2 (266-356)||(12000573-12000663)
chr2 (255-356)||(17148831-17148931)
chr2 (181-273)||(41114755-41114847)
chr2 (271-349)||(17249375-17249453)
chr2 (255-349)||(41010532-41010626)
chr2 (266-349)||(304100-304183)
chr2 (183-274)||(2475943-2476034)
chr2 (182-273)||(6799772-6799863)
chr2 (266-356)||(15651257-15651347)
chr2 (182-273)||(29257504-29257595)
chr2 (181-277)||(17249464-17249560)
chr2 (182-273)||(17148934-17149025)
chr2 (183-268)||(13203910-13203995)
chr2 (1-41)||(44717278-44717318)
chr2 (181-261)||(12000707-12000787)
chr2 (183-271)||(22572609-22572697)
chr2 (307-356)||(6799902-6799951)
chr2 (266-339)||(16221016-16221089)
chr2 (307-356)||(18299159-18299208)
chr2 (307-356)||(41114886-41114935)
chr2 (181-217)||(1542858-1542894)
chr2 (307-349)||(22572717-22572759)
chr2 (182-273)||(41010650-41010741)
chr2 (307-356)||(13203817-13203866)
chr2 (1-41)||(7771659-7771699)
chr2 (1-41)||(13455746-13455786)
chr2 (1-41)||(13461687-13461727)
chr2 (1-41)||(19879241-19879281)
chr2 (1-41)||(30964974-30965014)
chr2 (1-41)||(31002023-31002063)
chr2 (1-41)||(31008001-31008041)
chr2 (1-41)||(35085152-35085192)
chr2 (1-41)||(35091125-35091165)
chr2 (1-41)||(36750061-36750101)
chr2 (181-273)||(303977-304069)
chr2 (182-217)||(31162096-31162131)
chr2 (302-356)||(34756741-34756795)
chr2 (232-273)||(18299079-18299120)
chr2 (1-38)||(28683417-28683454)
chr2 (184-217)||(42755571-42755604)
chr2 (183-215)||(22483789-22483821)
chr2 (266-318)||(45444441-45444493)
[»] chr3 (43 HSPs)
chr3 (225-346)||(41358549-41358670)
chr3 (266-390)||(33179101-33179224)
chr3 (255-356)||(41218336-41218437)
chr3 (183-277)||(37516760-37516854)
chr3 (184-277)||(26370931-26371024)
chr3 (270-349)||(53068304-53068383)
chr3 (184-273)||(14461208-14461297)
chr3 (182-273)||(41218242-41218333)
chr3 (183-273)||(28311420-28311510)
chr3 (1-41)||(23138889-23138929)
chr3 (180-277)||(25391730-25391827)
chr3 (1-41)||(38449536-38449576)
chr3 (183-272)||(12909972-12910059)
chr3 (1-38)||(24643963-24644000)
chr3 (307-356)||(26371038-26371087)
chr3 (231-276)||(53987971-53988016)
chr3 (1-41)||(10761123-10761163)
chr3 (1-41)||(10769442-10769482)
chr3 (1-41)||(30051573-30051613)
chr3 (1-41)||(38456023-38456063)
chr3 (186-273)||(7501099-7501186)
chr3 (186-273)||(33178983-33179070)
chr3 (307-356)||(7501011-7501060)
chr3 (1-38)||(53071724-53071761)
chr3 (232-276)||(9600457-9600501)
chr3 (1-41)||(11840198-11840238)
chr3 (1-41)||(26429890-26429930)
chr3 (1-41)||(28964527-28964567)
chr3 (1-41)||(42191693-42191733)
chr3 (1-41)||(42197635-42197675)
chr3 (1-41)||(49151259-49151299)
chr3 (1-41)||(49157326-49157366)
chr3 (6-41)||(9586490-9586525)
chr3 (183-271)||(26278475-26278563)
chr3 (234-285)||(41199854-41199905)
chr3 (1-39)||(17056264-17056302)
chr3 (307-349)||(37516704-37516746)
chr3 (307-340)||(12909899-12909932)
chr3 (1-41)||(8331434-8331474)
chr3 (1-41)||(10238685-10238725)
chr3 (1-41)||(10244807-10244847)
chr3 (181-217)||(19269160-19269196)
chr3 (308-356)||(53651953-53652001)
[»] chr8 (32 HSPs)
chr8 (250-356)||(13243143-13243249)
chr8 (246-349)||(34282853-34282956)
chr8 (266-356)||(39431638-39431728)
chr8 (184-269)||(36406378-36406463)
chr8 (183-276)||(38214860-38214953)
chr8 (186-273)||(27321753-27321840)
chr8 (125-184)||(2308538-2308597)
chr8 (125-184)||(2313732-2313791)
chr8 (1-38)||(14417611-14417648)
chr8 (183-273)||(24965149-24965239)
chr8 (307-356)||(36406506-36406555)
chr8 (186-271)||(35384256-35384341)
chr8 (1-41)||(39727757-39727797)
chr8 (181-273)||(34282746-34282838)
chr8 (1-38)||(9934933-9934970)
chr8 (302-347)||(21138070-21138115)
chr8 (307-356)||(24965082-24965131)
chr8 (1-41)||(10705485-10705525)
chr8 (182-214)||(24592195-24592227)
chr8 (1-41)||(32896659-32896699)
chr8 (1-41)||(36818619-36818659)
chr8 (1-41)||(39736011-39736051)
chr8 (1-41)||(42033444-42033484)
chr8 (183-214)||(39532520-39532551)
chr8 (183-217)||(16594828-16594862)
chr8 (322-356)||(27321882-27321916)
chr8 (307-356)||(28928108-28928158)
chr8 (1-38)||(10699679-10699716)
chr8 (1-38)||(42993472-42993509)
chr8 (183-211)||(16532520-16532548)
chr8 (1-41)||(22220200-22220240)
chr8 (1-41)||(32890535-32890575)
[»] chr7 (39 HSPs)
chr7 (250-360)||(4843349-4843459)
chr7 (250-349)||(28694000-28694099)
chr7 (250-356)||(19377444-19377550)
chr7 (266-360)||(3012355-3012449)
chr7 (250-356)||(21932739-21932845)
chr7 (266-349)||(38128969-38129052)
chr7 (182-277)||(22206573-22206668)
chr7 (182-277)||(22228071-22228166)
chr7 (266-356)||(21688164-21688254)
chr7 (184-273)||(21932631-21932720)
chr7 (183-277)||(5991308-5991402)
chr7 (183-277)||(28693891-28693985)
chr7 (295-356)||(41759613-41759674)
chr7 (181-273)||(35300314-35300406)
chr7 (266-356)||(814961-815051)
chr7 (182-269)||(26722846-26722933)
chr7 (291-349)||(42439575-42439633)
chr7 (183-277)||(814861-814955)
chr7 (187-277)||(7873112-7873202)
chr7 (186-276)||(25688102-25688192)
chr7 (1-41)||(26380755-26380795)
chr7 (1-41)||(26383316-26383356)
chr7 (225-276)||(30852444-30852495)
chr7 (266-329)||(41862334-41862397)
chr7 (1-38)||(5849180-5849217)
chr7 (307-356)||(26722955-26723004)
chr7 (1-38)||(35153001-35153038)
chr7 (311-356)||(38991181-38991226)
chr7 (1-41)||(339028-339068)
chr7 (1-41)||(351434-351474)
chr7 (1-41)||(3811641-3811681)
chr7 (1-41)||(28421431-28421471)
chr7 (1-41)||(35148481-35148521)
chr7 (183-263)||(3012469-3012549)
chr7 (307-346)||(23704486-23704525)
chr7 (183-217)||(19400264-19400298)
chr7 (183-217)||(20965959-20965993)
chr7 (4-41)||(3817786-3817823)
chr7 (181-214)||(38575125-38575158)
[»] chr5 (51 HSPs)
chr5 (250-356)||(767331-767437)
chr5 (266-356)||(16667458-16667548)
chr5 (266-356)||(17192634-17192724)
chr5 (174-273)||(35469040-35469139)
chr5 (266-349)||(15503972-15504055)
chr5 (266-356)||(21069058-21069148)
chr5 (260-343)||(13942738-13942821)
chr5 (182-277)||(33007019-33007114)
chr5 (182-277)||(34846479-34846574)
chr5 (183-273)||(1672375-1672465)
chr5 (183-277)||(7161972-7162066)
chr5 (183-272)||(15675451-15675540)
chr5 (183-276)||(37552048-37552141)
chr5 (183-276)||(37654878-37654971)
chr5 (183-277)||(13942641-13942735)
chr5 (183-277)||(16567924-16568018)
chr5 (225-277)||(6900900-6900952)
chr5 (183-273)||(2476502-2476592)
chr5 (266-339)||(8214628-8214701)
chr5 (183-277)||(12267271-12267365)
chr5 (183-273)||(14832699-14832789)
chr5 (183-273)||(15504086-15504176)
chr5 (307-356)||(33006956-33007005)
chr5 (1-41)||(7390020-7390060)
chr5 (260-356)||(12267368-12267464)
chr5 (182-273)||(32953555-32953646)
chr5 (255-349)||(36234536-36234630)
chr5 (182-269)||(43228530-43228617)
chr5 (307-356)||(30249014-30249063)
chr5 (307-356)||(35468952-35469001)
chr5 (1-41)||(20499785-20499825)
chr5 (1-41)||(41296926-41296966)
chr5 (182-273)||(34444103-34444195)
chr5 (307-356)||(15675362-15675411)
chr5 (1-41)||(12686651-12686691)
chr5 (1-41)||(12692753-12692793)
chr5 (1-41)||(28525858-28525898)
chr5 (1-41)||(28531954-28531994)
chr5 (225-269)||(36234485-36234529)
chr5 (232-276)||(37779777-37779821)
chr5 (183-217)||(2985885-2985919)
chr5 (182-216)||(12448241-12448275)
chr5 (183-217)||(31649080-31649114)
chr5 (1-39)||(32094694-32094732)
chr5 (322-356)||(32953688-32953722)
chr5 (266-339)||(6900800-6900873)
chr5 (1-38)||(25408437-25408474)
chr5 (307-356)||(34846416-34846465)
chr5 (1-41)||(8706859-8706899)
chr5 (1-41)||(32097494-32097534)
chr5 (232-276)||(37607570-37607614)
[»] chr6 (30 HSPs)
chr6 (183-356)||(339385-339566)
chr6 (266-356)||(2836176-2836266)
chr6 (184-277)||(2960806-2960899)
chr6 (182-273)||(2941360-2941451)
chr6 (185-277)||(1780933-1781025)
chr6 (250-329)||(34188859-34188938)
chr6 (184-270)||(10397698-10397784)
chr6 (1-41)||(8651276-8651316)
chr6 (190-273)||(9696193-9696276)
chr6 (182-273)||(28614291-28614382)
chr6 (307-356)||(10397809-10397858)
chr6 (183-277)||(31188200-31188294)
chr6 (183-273)||(34248901-34248991)
chr6 (184-273)||(23663648-23663737)
chr6 (307-349)||(1781039-1781081)
chr6 (307-349)||(2941279-2941321)
chr6 (182-273)||(14938809-14938900)
chr6 (1-39)||(21783798-21783836)
chr6 (307-356)||(9046932-9046981)
chr6 (307-356)||(9696105-9696154)
chr6 (307-356)||(23663776-23663825)
chr6 (1-38)||(31756691-31756728)
chr6 (1-41)||(4580794-4580834)
chr6 (1-41)||(21771037-21771077)
chr6 (1-41)||(25353860-25353900)
chr6 (185-273)||(15529084-15529172)
chr6 (307-349)||(15122100-15122142)
chr6 (307-349)||(34249030-34249072)
chr6 (183-273)||(15122181-15122271)
chr6 (237-273)||(2836109-2836145)
[»] scaffold0021 (2 HSPs)
scaffold0021 (238-356)||(109247-109365)
scaffold0021 (266-344)||(112193-112271)
[»] scaffold0638 (2 HSPs)
scaffold0638 (182-276)||(4212-4306)
scaffold0638 (322-356)||(4160-4194)
[»] scaffold0618 (1 HSPs)
scaffold0618 (182-273)||(1833-1924)
[»] scaffold0075 (2 HSPs)
scaffold0075 (182-273)||(11661-11752)
scaffold0075 (307-356)||(6960-7009)
[»] scaffold0363 (1 HSPs)
scaffold0363 (1-38)||(1071-1108)
[»] scaffold0108 (1 HSPs)
scaffold0108 (234-292)||(20925-20983)
[»] scaffold0440 (1 HSPs)
scaffold0440 (1-41)||(1660-1700)
[»] scaffold0208 (1 HSPs)
scaffold0208 (1-41)||(12042-12082)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-37)||(173362-173398)
[»] scaffold0168 (1 HSPs)
scaffold0168 (183-217)||(16065-16099)
[»] scaffold0185 (1 HSPs)
scaffold0185 (1-38)||(5617-5654)


Alignment Details
Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 132 - 390
Target Start/End: Complemental strand, 24646326 - 24646068
Alignment:
Q  132 cagagtatagagccttagctgatcaagcagcagaagtagcatgacttaggtcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctc 231  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||       |||||||    
T  24646326 cagagtatagagccttggctgatcaagcagtagaagtagcatgacttaggtcagttgcggagccaggaattttatagagcctgggcaaaaaaattatctc 24646227  T
Q  232 aaaatgttacttccttcatgcgaataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaattt 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  24646226 aaaatgttacttccttcatgcgaataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatccttggcaaaatct 24646127  T
Q  332 gcaggaaatgtgtttcctacggaatgtacnnnnnnnttcacacgaaaagctaaaagttc 390  Q
    |||||||||||||||||||||||||||||       | |||| ||||||||||||||||    
T  24646126 gcaggaaatgtgtttcctacggaatgtacacaaaaatccacaggaaaagctaaaagttc 24646068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 186 - 349
Target Start/End: Complemental strand, 24745629 - 24745468
Alignment:
Q  186 tggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggatccaaaaat 285  Q
    ||||||||||||||||||||||||| ||||||       ||||| |||  |||||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  24745629 tggcggagccaggaattttatagagtctgggcaaaaaaattatcgcaa--tgttactttcttcatgcgaataatttcacatttcctgcggatcctaaaat 24745532  T
Q  286 ccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    || | |||||||||||||||   |||||||||| |||||||||| ||||| |||||||||||||    
T  24745531 cctagggtattacctcaccttaaaacctaaatccttggcaaaatctgcagaaaatgtgtttcct 24745468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 266 - 355
Target Start/End: Complemental strand, 34459248 - 34459159
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaa 355  Q
    |||| ||||||||| ||||||| |||||||||||||||||| |||| |||||| |||||||||| |||||||||||||||||||||||||    
T  34459248 tttcttgcggatcctaaaatcctaaggtattacctcacctgagaacttaaatccttggcaaaatctgcaggaaatgtgtttcctacggaa 34459159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 183 - 277
Target Start/End: Original strand, 31844529 - 31844623
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    |||||||||||||||||||||||||||| ||||||       ||||| |||||||||||||||||| |||||||||||||| ||||||| |||||    
T  31844529 cagtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaatgttacttccttcctgcgaataatttcacatttcctacggat 31844623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 9527176 - 9527101
Alignment:
Q  274 ggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    |||||| ||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  9527176 ggatcctaaaatcctaagatattacctcacctgggaacctaaatccttggcaaaatctgcaggagatgtgtttcct 9527101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 33468860 - 33468947
Alignment:
Q  184 agtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcct 271  Q
    ||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||| |||||||||||||| |||||||    
T  33468860 agtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcct 33468947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 273
Target Start/End: Complemental strand, 44305640 - 44305549
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||| | |||||||||||| |||||||||    
T  44305640 tcagtggcggagccaggaattttatagagcctgggcaaaaaaattatcgcaaaacgttacttccttcctacgaataatttcacatttcctgc 44305549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 14727557 - 14727467
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||||||| |||||||||||||||||||       ||||| ||||| |||||||||||| |||||||||||||| |||||||||    
T  14727557 cagtggcggagccagaaattttatagagcctgggcaaaaaaattatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgc 14727467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 25007691 - 25007601
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||| | |||||||||||| |||||||||    
T  25007691 cagtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgc 25007601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 4642046 - 4642129
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    |||||||||||||| ||||||| ||||||||||||||||| | |||||||||| ||| |||||| |||| ||||||| ||||||    
T  4642046 tttcctgcggatcctaaaatcctaaggtattacctcacctcgaaacctaaatccttgacaaaatctgcaagaaatgtatttcct 4642129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 273
Target Start/End: Original strand, 37153881 - 37153968
Alignment:
Q  186 tggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||| | |||||||||||| |||||||||    
T  37153881 tggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgc 37153968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 183 - 277
Target Start/End: Complemental strand, 4774199 - 4774105
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||||||||||||| |||||||||||| ||||||       ||||| ||||||||||||| |||| |||||||||||||| ||||| |||||||    
T  4774199 cagtggcggagccagaaattttatagagtctgggcaaaaaaattatcgcaaaatgttactttcttcctgcgaataatttcacatttcttgcggat 4774105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 266 - 339
Target Start/End: Complemental strand, 49898515 - 49898442
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaa 339  Q
    |||| ||||||||| ||||||| ||||||||||||||||| || ||||||||| |||||||||| |||||||||    
T  49898515 tttcttgcggatcctaaaatcctaaggtattacctcacctagggacctaaatccttggcaaaatctgcaggaaa 49898442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 266 - 329
Target Start/End: Original strand, 6802072 - 6802135
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaat 329  Q
    ||||||| |||||| ||||||  |||||||||||||||||||||||||||||| ||||||||||    
T  6802072 tttcctgaggatcctaaaatcgtaaggtattacctcacctgggaacctaaatccttggcaaaat 6802135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 273
Target Start/End: Original strand, 1428306 - 1428397
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||| ||||||||||||||||||||||||||||||       ||| | ||||| |||||||||||| | |||||||||||| |||| ||||    
T  1428306 tcagtagcggagccaggaattttatagagcctgggcaaaaaatttaccgcaaaacgttacttccttcctacgaataatttcacattttctgc 1428397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 356
Target Start/End: Original strand, 27584029 - 27584079
Alignment:
Q  306 gggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  27584029 gggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 27584079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 353
Target Start/End: Original strand, 33468967 - 33469013
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacgg 353  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||    
T  33468967 ggaacctaaatccttgacaaaatttgcaggaaatgtgtttcctacgg 33469013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 277
Target Start/End: Complemental strand, 8239499 - 8239405
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||||||||||||||||||||||||| ||| |||       ||||| ||||| |||||||||||| |  ||||||||||| ||||||| |||||    
T  8239499 cagtggcggagccaggaattttatagaacctaggcaaaaaatttatcgcaaaacgttacttccttcctatgaataatttcacatttcctacggat 8239405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 14727428 - 14727379
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  14727428 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 14727379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 27460794 - 27460745
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  27460794 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttccttcggaat 27460745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 27460905 - 27460816
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||||||||||| |||||||||||||||||||        ||||| |||||  ||||||||||| |||||||||||||| |||||||||    
T  27460905 cagtggcggagccaagaattttatagagcctggg-aaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgc 27460816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 31844637 - 31844686
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  31844637 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 31844686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 183 - 273
Target Start/End: Original strand, 27583905 - 27583991
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||||||||||||||||||||||||||||| ||       ||||| ||||| |||||||||    |||||||||||||| |||||||||    
T  27583905 cagtggcggagccaggaattttatagagcctgagcaaaaaatttatcgcaaaacgttacttcc----tgcgaataatttcacatttcctgc 27583991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 277
Target Start/End: Original strand, 4641973 - 4642019
Alignment:
Q  231 caaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||||    
T  4641973 caaaacgttacttccttcctgcgaataatttcacatttcctgcggat 4642019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 6331784 - 6331735
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| || |||||||||||||||| ||||||    
T  6331784 ggaacctaaatccttggcaaaatctgtaggaaatgtgtttcctgcggaat 6331735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 25011553 - 25011602
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| ||||| ||||||||||||| ||||||    
T  25011553 ggaacctaaatccttggcaaaatctgcagaaaatgtgtttcctgcggaat 25011602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1077931 - 1077891
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  1077931 ttgatcactaatcaattaaggctcacaattgataaatagct 1077891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 261
Target Start/End: Original strand, 25011426 - 25011503
Alignment:
Q  184 agtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataattt 261  Q
    |||||||| ||||| |||||||||||  ||||||       ||||| ||||| |||||||||||||||||||||||||    
T  25011426 agtggcggcgccagaaattttatagaatctgggcaaaaaaattatcgcaaaacgttacttccttcatgcgaataattt 25011503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25275519 - 25275559
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  25275519 ttgatcactaatcaattaaggctcacaattgataaatagct 25275559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25382008 - 25382048
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  25382008 ttgatcactaatcaattaaggctcacaattgataaatagct 25382048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31051231 - 31051191
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  31051231 ttgatcactaatcaactaaggcccacaattgataaatagct 31051191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31057731 - 31057691
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  31057731 ttgatcactaatcaactaaggcccacaattgataaatagct 31057691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 42817825 - 42817789
Alignment:
Q  181 gtcagtggcggagccaggaattttatagagcctgggc 217  Q
    |||||||||||||||||||||||||||||| ||||||    
T  42817825 gtcagtggcggagccaggaattttatagagtctgggc 42817789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 50305884 - 50305844
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  50305884 ttgatcactaatcaattaaggctcacaattgataaatagct 50305844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 34459348 - 34459268
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttca 263  Q
    ||||| |||||||||||||||||||||| ||||||       ||||| ||||| ||||||||||||   ||||||||||||    
T  34459348 cagtgacggagccaggaattttatagagtctgggcaaaaaatttatcacaaaacgttacttccttcccacgaataatttca 34459268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 356
Target Start/End: Original strand, 48940419 - 48940482
Alignment:
Q  293 tattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    ||||||||||||||  || ||||||| ||| |||||| |||| |||||||||||||| ||||||    
T  48940419 tattacctcacctgaaaagctaaatccttgacaaaatctgcatgaaatgtgtttcctgcggaat 48940482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 21973678 - 21973712
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggc 217  Q
    ||||||||||||||||||||| |||||||||||||    
T  21973678 cagtggcggagccaggaatttcatagagcctgggc 21973712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 8093326 - 8093355
Alignment:
Q  9 taatcaactaagactcacaattgataaata 38  Q
    ||||||||||||||||||||||||||||||    
T  8093326 taatcaactaagactcacaattgataaata 8093355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 217
Target Start/End: Complemental strand, 11647390 - 11647357
Alignment:
Q  184 agtggcggagccaggaattttatagagcctgggc 217  Q
    ||||| ||||||||||||||||||||||||||||    
T  11647390 agtggtggagccaggaattttatagagcctgggc 11647357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25387975 - 25388012
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaata 38  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  25387975 ttgatcactaatcaattaaggctcacaattgataaata 25388012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 27954848 - 27954811
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaata 38  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  27954848 ttgatcactaatcaattaagcctcacaattgataaata 27954811  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 33458382 - 33458419
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaata 38  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  33458382 ttgatcactaatcaattaaggctcacaattgataaata 33458419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 38152430 - 38152467
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaata 38  Q
    |||||||||||||||||||| | |||||||||||||||    
T  38152430 ttgatcactaatcaactaaggcccacaattgataaata 38152467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 44409684 - 44409647
Alignment:
Q  4 atcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  44409684 atcactaatcaattaaggctcacaattgataaatagct 44409647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 49898609 - 49898535
Alignment:
Q  189 cggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttca 263  Q
    ||||||||| |||| ||||||| ||||||       ||||| ||||||||||| |||||| ||||||||||||||    
T  49898609 cggagccagaaattatatagagtctgggcaaaaaatttatcgcaaaatgttacgtccttcctgcgaataatttca 49898535  T

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Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 14201411 - 14201443
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgg 215  Q
    ||||||||||||||| |||||||||||||||||    
T  14201411 cagtggcggagccagaaattttatagagcctgg 14201443  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 24927241 - 24927281
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| ||||||||  |||||||||||||||    
T  24927241 ttgatcactaatcaattaagactccaaattgataaatagct 24927281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 182 - 356
Target Start/End: Original strand, 41972329 - 41972503
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggatccaa 281  Q
    ||||| |||||||||||||||||||| |  |||| |       ||||| ||||| |||||||||||| |||||||||||||| |||| |||||||||| |    
T  41972329 tcagtagcggagccaggaattttataaaatctggtcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacattttctgcggatccta 41972428  T
Q  282 aaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||  ||| ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||    
T  41972429 aaatcttaagatattacctcacctgggaaccttaatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 41972503  T

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Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 250 - 356
Target Start/End: Complemental strand, 49745195 - 49745089
Alignment:
Q  250 tgcgaataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    |||| ||||||||| ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||| |||||||||| ||||| |||||||||||||    
T  49745195 tgcggataatttcacatttcctgcggatcctaaaatcctaaggtattacctcacctaggaacctaaatccttggcaaaatctgcagaaaatgtgtttcct 49745096  T
Q  350 acggaat 356  Q
    |||||||    
T  49745095 acggaat 49745089  T

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Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 25237716 - 25237626
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    ||||||||| |||| ||||||  |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  25237716 tttcctgcgaatcctaaaatcataaggtattacctcacctgggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 25237626  T

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Target: chr4; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 271 - 356
Target Start/End: Complemental strand, 50099975 - 50099890
Alignment:
Q  271 tgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||||||| || ||||||||||||| |||||  |||||||||||||    
T  50099975 tgcggatcctaaaatcctaaggtattacttcacctgggaacctaaatccttagcaaaatttgcagaaaatgaatttcctacggaat 50099890  T

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Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 266 - 354
Target Start/End: Original strand, 2521907 - 2521995
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacgga 354  Q
    |||||||||||||| ||||||| ||| |||||||||||||||||||||||||| |||  ||||| | ||||||||||||||||| ||||    
T  2521907 tttcctgcggatcctaaaatcctaagatattacctcacctgggaacctaaatccttgataaaatctacaggaaatgtgtttcctgcgga 2521995  T

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Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 277
Target Start/End: Complemental strand, 10058743 - 10058650
Alignment:
Q  184 agtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||| |||||||||||||| ||||||| |||||    
T  10058743 agtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggat 10058650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 36947657 - 36947575
Alignment:
Q  267 ttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||||||||  ||||||||||  ||||||||| ||||||||    
T  36947657 ttcctgcggatcctaaaatcctaaggtattaccacacctgggaacctaaattcttggcaaaatccgcaggaaatatgtttcct 36947575  T

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Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 250 - 340
Target Start/End: Complemental strand, 52373894 - 52373804
Alignment:
Q  250 tgcgaataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaat 340  Q
    |||| ||||||||| ||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||  || |||||| |||| |||||    
T  52373894 tgcggataatttcacatttcatgcggatcctaaaatcctaaggtattacctcacctgggaacctaaatccctgacaaaatctgcaagaaat 52373804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 52373983 - 52373888
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||||||||||||||||||||||||||| ||| ||       ||||| ||||| |||||||||||| |||||||||||||| |||||||||||||    
T  52373983 tcagtggcggagccaggaattttatagagtctgtgcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcggat 52373888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 2017324 - 2017413
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcct 271  Q
    |||||||||||||||||||||||||| |||||||||       ||||| ||||| |||||||||||| | |||||||||||| |||||||    
T  2017324 tcagtggcggagccaggaattttataaagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcct 2017413  T

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Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 354
Target Start/End: Complemental strand, 8901934 - 8901855
Alignment:
Q  274 ggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacgga 354  Q
    |||||| ||||||| ||||||||||||||| ||| || ||||||| |||||||||| ||||||||||||||||||| ||||    
T  8901934 ggatcctaaaatcctaaggtattacctcac-tggaaatctaaatccttggcaaaatctgcaggaaatgtgtttcctgcgga 8901855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 273
Target Start/End: Complemental strand, 10715883 - 10715794
Alignment:
Q  184 agtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||||||| ||||||||||||||||||       ||||| |||||  ||||||||||| |||||||||||||| |||||||||    
T  10715883 agtggcggagccaggtattttatagagcctgggcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgc 10715794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 273
Target Start/End: Complemental strand, 10929653 - 10929564
Alignment:
Q  184 agtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||||||| ||||||||||||||||||       ||||| |||||  ||||||||||| |||||||||||||| |||||||||    
T  10929653 agtggcggagccaggtattttatagagcctgggcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgc 10929564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 46645831 - 46645742
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctg 272  Q
    |||||||||||||||||||||||||||| |||||        ||||| ||||| |||||||||||| |||||||||||||| ||||||||    
T  46645831 cagtggcggagccaggaattttatagagtctgggaaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctg 46645742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 9003783 - 9003695
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcct 271  Q
    ||||||||||| ||| ||||||||||||||||| |       ||||| |||||||||||||||||| |||||||||||||| |||||||    
T  9003783 cagtggcggagtcagaaattttatagagcctggacaaaaaaattatcgcaaaatgttacttccttcttgcgaataatttcacatttcct 9003695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 277
Target Start/End: Complemental strand, 31364339 - 31364248
Alignment:
Q  186 tggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    |||||||||||| ||||||||||||| |||||       ||||| ||||| |||||||||||| |||||||||||||| ||||||| |||||    
T  31364339 tggcggagccagaaattttatagagcatgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggat 31364248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 4552413 - 4552323
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||||||||||||||||||||||||| ||||||       ||||| ||||| |||||||||||| | | |||||||||| |||||||||    
T  4552413 cagtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctacaaataatttcacatttcctgc 4552323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 4728786 - 4728696
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||||||||| ||||||||||||||||||||||       ||||| ||||| |||||||||||| ||| |||||||||| |||| ||||    
T  4728786 cagtggcggagctaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcaaataatttcacattttctgc 4728696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 302 - 347
Target Start/End: Original strand, 31929043 - 31929088
Alignment:
Q  302 acctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttc 347  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  31929043 acctgggaacctaaatccttggcaaaatttgcaggaaatgtgtttc 31929088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 276
Target Start/End: Original strand, 11826936 - 11827029
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcgga 276  Q
    |||||||| |||||| ||||||||||||||| |||       |||||  ||||||||||||||||| |||||||||||||| ||||||| ||||    
T  11826936 cagtggcgaagccagaaattttatagagcctaggcaaaaaaattatcgtaaaatgttacttccttcctgcgaataatttcacatttcctacgga 11827029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 276
Target Start/End: Complemental strand, 14044552 - 14044459
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcgga 276  Q
    ||||||||||||||| ||||||||||||  |||||       ||||| ||||||||||| |||||| || ||||||||||| ||||||||||||    
T  14044552 cagtggcggagccagaaattttatagagtatgggcaaaaaaattatcgcaaaatgttacctccttcctgagaataatttcacatttcctgcgga 14044459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 277
Target Start/End: Original strand, 2521792 - 2521880
Alignment:
Q  189 cggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||||||||||||||||||| | |||||       |||||  |||| |||||||||||| |||||||||||||| |||||||||||||    
T  2521792 cggagccaggaattttatagaacatgggcaaaaaatttatcgtaaaacgttacttccttcctgcgaataatttcacatttcctgcggat 2521880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 4728657 - 4728608
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  4728657 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 4728608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 31364234 - 31364185
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  31364234 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 31364185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 32006111 - 32006021
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||| || ||||||||||||| ||||||       ||||| ||||| |||||||||||| | |||||||||||| |||||||||    
T  32006111 cagtggcggagtcatgaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgc 32006021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 276
Target Start/End: Complemental strand, 32828368 - 32828278
Alignment:
Q  186 tggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcgga 276  Q
    |||||||||||| |||||||||| ||||||||       ||||| |||||| ||||||||||| ||| |||||||| | ||||||||||||    
T  32828368 tggcggagccagaaattttatagggcctgggcaaaaaaattatcacaaaatattacttccttcctgcaaataattttacatttcctgcgga 32828278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6257677 - 6257717
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  6257677 ttgatcactaatcaactaaggctcacaattgataaatagct 6257717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10733822 - 10733862
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  10733822 ttgatcactaatcaactaaggctcacaattgataaatagct 10733862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10739809 - 10739849
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  10739809 ttgatcactaatcaactaaggctcacaattgataaatagct 10739849  T

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Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10947591 - 10947631
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  10947591 ttgatcactaatcaactaaggctcacaattgataaatagct 10947631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10953578 - 10953618
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  10953578 ttgatcactaatcaactaaggctcacaattgataaatagct 10953618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26972027 - 26972067
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  26972027 ttgatcactaatcaattaagactcacaattgataaatagct 26972067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 25237816 - 25237736
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttca 263  Q
    |||||||||||| ||||||| |||||||| |||||       ||||| ||||| |||||||||||| ||||||||||||||    
T  25237816 cagtggcggagctaggaattatatagagcatgggcaaattttttatcacaaaacgttacttccttcctgcgaataatttca 25237736  T

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Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 9694291 - 9694201
Alignment:
Q  184 agtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcgga 276  Q
    |||||||||||||| |||||| ||||||||||||       ||||| |||||||||| ||||||| |||||||||||| | ||||||||||||    
T  9694291 agtggcggagccagaaatttt-tagagcctgggcaaaaaa-ttatcgcaaaatgttatttccttcttgcgaataatttgacatttcctgcgga 9694201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 40969452 - 40969362
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||| ||||||||| ||||||||||||| |||||       ||||| ||||| |||||||||||  |||||||||||||| |||| ||||    
T  40969452 cagtgacggagccagcaattttatagagcttgggcaaaaaatttatcgcaaaacgttacttcctttctgcgaataatttcatattttctgc 40969362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 48160646 - 48160606
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  48160646 ttgatcactaatcaactaaggcccacaattgataaatagct 48160606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 48166865 - 48166825
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  48166865 ttgatcactaatcaactaaggcccacaattgataaatagct 48166825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 50100056 - 50100004
Alignment:
Q  225 ttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||| ||||| |||||||||||| | |||||||||||| |||||||||||||    
T  50100056 ttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcggat 50100004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 50168282 - 50168242
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  50168282 ttgaccactaatcaattaagactcacaattgataaatagct 50168242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 24974532 - 24974566
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggc 217  Q
    |||||||||||||||||| ||||||||||||||||    
T  24974532 cagtggcggagccaggaaatttatagagcctgggc 24974566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 50384101 - 50384067
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggc 217  Q
    |||||||||||||| ||||||||||||||||||||    
T  50384101 cagtggcggagccaagaattttatagagcctgggc 50384067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 2576400 - 2576310
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||||||||||| |||||||||| || ||||||       ||||| ||||| |||||||||||  ||||| |||||||| |||| ||||    
T  2576400 cagtggcggagccaagaattttataaagtctgggcaaaaaaattatcgcaaaacgttacttcctttctgcgattaatttcatattttctgc 2576310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 10058636 - 10058587
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||| ||||| ||| ||||||||||||||| ||||||    
T  10058636 ggaacctaaatccttggtaaaatctgctggaaatgtgtttcctgcggaat 10058587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 210
Target Start/End: Complemental strand, 13968407 - 13968379
Alignment:
Q  182 tcagtggcggagccaggaattttatagag 210  Q
    |||||||||||||||||||||||||||||    
T  13968407 tcagtggcggagccaggaattttatagag 13968379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 15034438 - 15034490
Alignment:
Q  234 aatgttacttccttcatgcgaataatttcaaatttcctgcggatccaaaaatc 286  Q
    ||||||||||||||| || | |||||| || ||||||||||||||| ||||||    
T  15034438 aatgttacttccttcctgtggataattgcacatttcctgcggatcctaaaatc 15034490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19686790 - 19686830
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||||| |||||| |||||||||||    
T  19686790 ttgatcactaatcaattaagacacacaatcgataaatagct 19686830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24287674 - 24287634
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||| ||||||||||    
T  24287674 ttgatcactaatcaattaaggctcacaatttataaatagct 24287634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26957276 - 26957316
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  26957276 ttgatcactaattaattaaggctcacaattgataaatagct 26957316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 42844026 - 42843994
Alignment:
Q  185 gtggcggagccaggaattttatagagcctgggc 217  Q
    |||||||||||||||||| ||||||||||||||    
T  42844026 gtggcggagccaggaattctatagagcctgggc 42843994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 33909233 - 33909393
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggatccaa 281  Q
    |||||||||| | ||| |||||||||||| ||||||       ||||| ||||||||||| |||||||||| |||||||||| |||||||| |||||| |    
T  33909233 tcagtggcggggtcagaaattttatagagtctgggcaaaaactttatcgcaaaatgttacatccttcatgcaaataatttcacatttcctgtggatccta 33909332  T
Q  282 aaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgt 342  Q
    |||||| | |||||||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  33909333 aaatcctatggtattacctcacctgagaacctaaatctttggaaaaatctgcaggaaatgt 33909393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 255 - 356
Target Start/End: Complemental strand, 25563086 - 25562985
Alignment:
Q  255 ataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacgga 354  Q
    ||||||||| |||||||| |||||| ||||||| | |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||| ||||    
T  25563086 ataatttcacatttcctgtggatcctaaaatcctatggtattacctcacctgggaacctaaatccttggcaaaatctgcaggaaatgtatttcctgcgga 25562987  T
Q  355 at 356  Q
    ||    
T  25562986 at 25562985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 12000663 - 12000573
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||||| ||||||| ||||||||||||||||| || ||||| ||| |||||||||| ||||||||||||||||||| ||||||    
T  12000663 tttcctgcggatcctaaaatcctaaggtattacctcacctagggacctatatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 12000573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 255 - 356
Target Start/End: Complemental strand, 17148931 - 17148831
Alignment:
Q  255 ataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacgga 354  Q
    |||||| || ||||||||||||||| ||||||| | |||||| ||||||||||||||||||||| || ||||||| ||||||||||||||||||| ||||    
T  17148931 ataattccacatttcctgcggatcctaaaatcctatggtattccctcacctgggaacctaaatcctt-gcaaaatctgcaggaaatgtgtttcctgcgga 17148833  T
Q  355 at 356  Q
    ||    
T  17148832 at 17148831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 41114755 - 41114847
Alignment:
Q  181 gtcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||||| |||||||||||||||||||||| |||||       ||||| ||||| ||||||||||||||||||||||||||| |||||||||    
T  41114755 gtcagtggaggagccaggaattttatagagcttgggcaaaaaatttatcgcaaaacgttacttccttcatgcgaataatttcacatttcctgc 41114847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 349
Target Start/End: Complemental strand, 17249453 - 17249375
Alignment:
Q  271 tgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||||| |||||||||| | || ||||||||||||||    
T  17249453 tgcggatcctaaaatcctaaggtattacctcacctgagaacctaaatccttggcaaaatctacaagaaatgtgtttcct 17249375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 349
Target Start/End: Complemental strand, 41010626 - 41010532
Alignment:
Q  255 ataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    ||||||||| ||||||||||||||| ||||||    ||||||||||||| |||||||||||||| || | ||||| |||||||||||||||||||    
T  41010626 ataatttcacatttcctgcggatcctaaaatcttgtggtattacctcacatgggaacctaaatccttagtaaaatctgcaggaaatgtgtttcct 41010532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 304100 - 304183
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    |||||||||||||| ||||||  | ||| ||||||||| |||||||||||||| |||||||||| |||| ||||||||||||||    
T  304100 tttcctgcggatcctaaaatcttatggtgttacctcacatgggaacctaaatccttggcaaaatctgcaagaaatgtgtttcct 304183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 2476034 - 2475943
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcg 274  Q
    ||||||| ||| |||||||||||||||||||||||       ||||| ||||| |||||||||||| |||||||||||||| ||||||||||    
T  2476034 cagtggcagagtcaggaattttatagagcctgggcaaaaaaattatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcg 2475943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 273
Target Start/End: Original strand, 6799772 - 6799863
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||||| ||||||||||||||||||||||       ||||| ||||| |||| ||||||| |||||||||||||| |||||||||    
T  6799772 tcagtggcggagctaggaattttatagagcctgggcaaattttttatcacaaaacgttagttccttcctgcgaataatttcacatttcctgc 6799863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 15651347 - 15651257
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||| | ||||| ||||||| |||| |||||||||||| || ||||||||| ||||||||||  |||||||||||||||||| ||||||    
T  15651347 tttcctactgatcctaaaatcctaaggcattacctcacctagggacctaaatccttggcaaaatacgcaggaaatgtgtttcctgcggaat 15651257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 273
Target Start/End: Complemental strand, 29257595 - 29257504
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||||||||||||||||||||| ||||||       ||||| ||||| |||||||||||  |||||||||||||| |||||||||    
T  29257595 tcagtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttcctttctgcgaataatttcacatttcctgc 29257504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 17249560 - 17249464
Alignment:
Q  181 gtcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||||||||||| |||||||||||||||| ||||||       ||||  ||||| ||||||| |||| |||||||||||||| |||||||||||||    
T  17249560 gtcagtggcggagtcaggaattttatagagtctgggcaaaatatttatagcaaaacgttactttcttcctgcgaataatttcacatttcctgcggat 17249464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 273
Target Start/End: Complemental strand, 17149025 - 17148934
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||||| || |||||||| |||| |||||       ||||||||||| |||||||||||| |||||||||||||| |||||||||    
T  17149025 tcagtggcggagctagaaattttattgagcttgggcaaaaaatttatctcaaaacgttacttccttcctgcgaataatttcacatttcctgc 17148934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 13203995 - 13203910
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaattt 268  Q
    ||||||||||||||||||||||||||||| || ||       ||||| ||||||||||||||||||  ||||||||||||| ||||    
T  13203995 cagtggcggagccaggaattttatagagcatgagcaaaaaatttatcgcaaaatgttacttccttccagcgaataatttcacattt 13203910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44717278 - 44717318
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44717278 ttgatcactaatcaactaagactcacaattgataaatagct 44717318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 12000787 - 12000707
Alignment:
Q  181 gtcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataattt 261  Q
    |||||||||||||||||||||| |||||||||| |||       ||||| ||||||||||| |||||| ||||||||||||    
T  12000787 gtcagtggcggagccaggaattatatagagcctaggcaaaaaaattatcgcaaaatgttacgtccttcctgcgaataattt 12000707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 22572609 - 22572697
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcct 271  Q
    ||||||||||||||||||||||||| ||||||| |       ||||| ||||| ||||||| |||| |||||||||||||| |||||||    
T  22572609 cagtggcggagccaggaattttataaagcctggacaaaaaatttatcgcaaaacgttactttcttcctgcgaataatttcacatttcct 22572697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 6799902 - 6799951
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  6799902 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 6799951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 339
Target Start/End: Original strand, 16221016 - 16221089
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaa 339  Q
    |||||||| ||||| ||||||| ||||||||| ||||||||||||| |||||| || |||||||  ||||||||    
T  16221016 tttcctgcagatcctaaaatcctaaggtattatctcacctgggaacttaaatccttagcaaaatccgcaggaaa 16221089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 18299159 - 18299208
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  18299159 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 18299208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 41114886 - 41114935
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  41114886 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 41114935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 1542894 - 1542858
Alignment:
Q  181 gtcagtggcggagccaggaattttatagagcctgggc 217  Q
    |||||||||||||||||||||||||||||||||||||    
T  1542894 gtcagtggcggagccaggaattttatagagcctgggc 1542858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 22572717 - 22572759
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  22572717 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcct 22572759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 273
Target Start/End: Complemental strand, 41010741 - 41010650
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||| |||||| |||||||||||||||  ||| |       ||||| ||||| |||||||||||| |||||||||||||| |||||||||    
T  41010741 tcagtgacggagctaggaattttatagagtgtggacaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgc 41010650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 13203866 - 13203817
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| ||||||||| ||||||||| ||||||    
T  13203866 ggaacctaaatccttggcaaaatctgcaggaaacgtgtttcctgcggaat 13203817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7771659 - 7771699
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  7771659 ttgatcagtaatcaactaagacttacaattgataaatagct 7771699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13455786 - 13455746
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  13455786 ttgatcactaatcaattaaggctcacaattgataaatagct 13455746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13461727 - 13461687
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  13461727 ttgatcactaatcaattaaggctcacaattgataaatagct 13461687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19879281 - 19879241
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| ||||||||| ||||||||||    
T  19879281 ttgatcactaatcaactaaggctcacaattaataaatagct 19879241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30965014 - 30964974
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  30965014 ttgatcactaatcaactaaggcccacaattgataaatagct 30964974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31002063 - 31002023
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  31002063 ttgatcactaatcaactaaggcccacaattgataaatagct 31002023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31008041 - 31008001
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  31008041 ttgatcactaatcaactaaggcccacaattgataaatagct 31008001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35085152 - 35085192
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  35085152 ttgatcactaatcaattaaggctcacaattgataaatagct 35085192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35091125 - 35091165
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  35091125 ttgatcactaatcaattaaggctcacaattgataaatagct 35091165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36750101 - 36750061
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  36750101 ttgatcactaatcaattaaggctcacaattgataaatagct 36750061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 303977 - 304069
Alignment:
Q  181 gtcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||||||||| ||||||||||||  |||||       ||||| ||||| |||||||| |   |||||||||||||| |||||||||    
T  303977 gtcagtggcggagccagaaattttatagagtttgggcaaaaaaattatcgcaaaacgttacttcttatctgcgaataatttcacatttcctgc 304069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 217
Target Start/End: Original strand, 31162096 - 31162131
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggc 217  Q
    ||||||||||||||||||| ||||||||||||||||    
T  31162096 tcagtggcggagccaggaaatttatagagcctgggc 31162131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 356
Target Start/End: Complemental strand, 34756795 - 34756741
Alignment:
Q  302 acctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    ||||||||||||||||| ||||||||||   ||||||| ||| ||||||||||||    
T  34756795 acctgggaacctaaatccttggcaaaatccacaggaaacgtgattcctacggaat 34756741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 18299079 - 18299120
Alignment:
Q  232 aaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||| |||||||||||| |||||||||||||| |||||||||    
T  18299079 aaaacgttacttccttcctgcgaataatttcacatttcctgc 18299120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28683417 - 28683454
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaata 38  Q
    |||||||||||||||||||| | |||||||||||||||    
T  28683417 ttgatcactaatcaactaaggcccacaattgataaata 28683454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 42755571 - 42755604
Alignment:
Q  184 agtggcggagccaggaattttatagagcctgggc 217  Q
    ||||||||||||||||||| ||||||||||||||    
T  42755571 agtggcggagccaggaattatatagagcctgggc 42755604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 22483821 - 22483789
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgg 215  Q
    ||||||||||||||||||||| |||||||||||    
T  22483821 cagtggcggagccaggaatttcatagagcctgg 22483789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 318
Target Start/End: Original strand, 45444441 - 45444493
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatc 318  Q
    |||| ||| ||||| ||||||| | |||||||||||||||| |||||||||||    
T  45444441 tttcttgcagatcctaaaatcctatggtattacctcacctgtgaacctaaatc 45444493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 8e-34; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 225 - 346
Target Start/End: Original strand, 41358549 - 41358670
Alignment:
Q  225 ttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggc 324  Q
    ||||| ||||| |||| ||||||| |||| |||||| || ||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  41358549 ttatcgcaaaacgttatttccttcctgcggataattgcacatttcctgcggatccaaaaatcctaaggtattacctcacctgagaacctaaatcattggc 41358648  T
Q  325 aaaatttgcaggaaatgtgttt 346  Q
    |||||  |||||||||||||||    
T  41358649 aaaatccgcaggaaatgtgttt 41358670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 390
Target Start/End: Original strand, 33179101 - 33179224
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaatgtacnnnnn 365  Q
    ||||||||| |||| ||||||| | |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||| |||         
T  33179101 tttcctgcg-atcctaaaatcctatggtattacctcacctgggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaa 33179199  T
Q  366 nnttcacacgaaaagctaaaagttc 390  Q
      ||| || ||||||||||||||||    
T  33179200 aattcgcaggaaaagctaaaagttc 33179224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 255 - 356
Target Start/End: Original strand, 41218336 - 41218437
Alignment:
Q  255 ataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacgga 354  Q
    ||||||| | ||||||||||||||| ||||||| ||||||||||||||| || ||||||||||  ||||||||||  |||||||||||||||||| ||||    
T  41218336 ataattttacatttcctgcggatcctaaaatcctaaggtattacctcacatgagaacctaaattcttggcaaaatcggcaggaaatgtgtttcctgcgga 41218435  T
Q  355 at 356  Q
    ||    
T  41218436 at 41218437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 183 - 277
Target Start/End: Complemental strand, 37516854 - 37516760
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    |||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||| |||||||||||||| ||||||| |||||    
T  37516854 cagtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggat 37516760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 277
Target Start/End: Original strand, 26370931 - 26371024
Alignment:
Q  184 agtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||||||||||||||||||||||||| ||||||       ||||| ||||| |||||||||||| |||||||||||||| ||||||| |||||    
T  26370931 agtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggat 26371024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 53068383 - 53068304
Alignment:
Q  270 ctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    ||||| |||| ||||||| ||||||||| ||||||| |||||||||||  |||||||||| |||||||||||||||||||    
T  53068383 ctgcgaatcctaaaatcctaaggtattatctcacctaggaacctaaattcttggcaaaatctgcaggaaatgtgtttcct 53068304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 273
Target Start/End: Complemental strand, 14461297 - 14461208
Alignment:
Q  184 agtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||| | |||||||||| | |||||||||    
T  14461297 agtggcggagccaggaattttatagagcctgggcaaaaaatttatcacaaaacgttacttccttcctacgaataattttacatttcctgc 14461208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 273
Target Start/End: Original strand, 41218242 - 41218333
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||||||||| |||||||||||||||| || |||       ||||| ||||| |||||||||||| |||||||||||||| |||||||||    
T  41218242 tcagtggcggagtcaggaattttatagagtctaggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgc 41218333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 28311510 - 28311420
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||||||||||||||||||||||||| ||||||       ||||| |||||  ||||||||||| | |||||||||||| |||||||||    
T  28311510 cagtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacattacttccttcctacgaataatttcacatttcctgc 28311420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23138889 - 23138929
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23138889 ttgatcactaatcaactaagactcacaattgataaatagct 23138929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 25391730 - 25391827
Alignment:
Q  180 ggtcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    |||||||||| ||||||||||||||||||||| |||||       ||||| |||||  ||||||||||| | |||||||||||| ||||||| |||||    
T  25391730 ggtcagtggcagagccaggaattttatagagcttgggcaaaaaatttatcgcaaaacattacttccttcttacgaataatttcacatttcctacggat 25391827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38449536 - 38449576
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38449536 ttgatcactaatcaactaagactcacaattgataaatagct 38449576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 12910059 - 12909972
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctg 272  Q
    |||||||||||||||||||||||||||||||||||       ||||| ||||  ||||||||||||   |||||||||||| ||||||||    
T  12910059 cagtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaatcgttacttccttc--ccgaataatttcacatttcctg 12909972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24643963 - 24644000
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaata 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24643963 ttgatcactaatcaactaagactcacaattgataaata 24644000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 26371038 - 26371087
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  26371038 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 26371087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 276
Target Start/End: Complemental strand, 53988016 - 53987971
Alignment:
Q  231 caaaatgttacttccttcatgcgaataatttcaaatttcctgcgga 276  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||    
T  53988016 caaaatgttacttccttcctgcgaataatttcacatttcctgcgga 53987971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10761123 - 10761163
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  10761123 ttgatcactaatcaactaaggctcacaattgataaatagct 10761163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10769442 - 10769482
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  10769442 ttgatcactaatcaactaaggctcacaattgataaatagct 10769482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30051573 - 30051613
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  30051573 ttgatcactaatcaactaaggctcacaattgataaatagct 30051613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38456023 - 38456063
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  38456023 ttgatcactaatcaactaacactcacaattgataaatagct 38456063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 273
Target Start/End: Complemental strand, 7501186 - 7501099
Alignment:
Q  186 tggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||||||||||||||||||||||||| |         ||||| ||||| ||||||| |||| |||||||||||||| |||||||||    
T  7501186 tggcggagccaggaattttatagagcctcgataaaaaatttatcgcaaaacgttacttacttcctgcgaataatttcacatttcctgc 7501099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 273
Target Start/End: Original strand, 33178983 - 33179070
Alignment:
Q  186 tggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||||| |||||||||||||||| ||||||       ||||| ||||| |||||||| ||| |||||||||||||| |||| ||||    
T  33178983 tggcggagtcaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttcattcctgcgaataatttcacattttctgc 33179070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 7501060 - 7501011
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| || |||||||||||||||| ||||||    
T  7501060 ggaacctaaatccttggcaaaatctgtaggaaatgtgtttcctgcggaat 7501011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 53071724 - 53071761
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaata 38  Q
    |||||||||||||||||||| |||||||||||||||||    
T  53071724 ttgatcactaatcaactaaggctcacaattgataaata 53071761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 9600501 - 9600457
Alignment:
Q  232 aaaatgttacttccttcatgcgaataatttcaaatttcctgcgga 276  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||    
T  9600501 aaaatgttacttccttcctacgaataatttcatatttcctgcgga 9600457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11840198 - 11840238
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  11840198 ttgatcactaatcaattaaggctcacaattgataaatagct 11840238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26429890 - 26429930
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  26429890 ttgatcactaatcaattaaggctcacaattgataaatagct 26429930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28964567 - 28964527
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| ||||||||| ||||||||||    
T  28964567 ttgatcactaatcaactaaggctcacaatttataaatagct 28964527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42191693 - 42191733
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  42191693 ttgatcactaatcaattaaggctcacaattgataaatagct 42191733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42197635 - 42197675
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  42197635 ttgatcactaatcaattaaggctcacaattgataaatagct 42197675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 49151299 - 49151259
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  49151299 ttgatcactaatcaactaaggcccacaattgataaatagct 49151259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 49157366 - 49157326
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  49157366 ttgatcactaatcaactaaggcccacaattgataaatagct 49157326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 9586490 - 9586525
Alignment:
Q  6 cactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| ||||||||||||||||||||    
T  9586490 cactaatcaactaaggctcacaattgataaatagct 9586525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 26278563 - 26278475
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcct 271  Q
    |||||||||||| || ||||||||||||  | |||       ||||| ||||||| |||||||||| |||||||||||||| |||||||    
T  26278563 cagtggcggagcaagaaattttatagagtttaggcaaaaaaattatcgcaaaatgatacttccttcttgcgaataatttcacatttcct 26278475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 285
Target Start/End: Original strand, 41199854 - 41199905
Alignment:
Q  234 aatgttacttccttcatgcgaataatttcaaatttcctgcggatccaaaaat 285  Q
    ||||||||||||||| |||| |||||| || ||||||||||||||| |||||    
T  41199854 aatgttacttccttcctgcggataattgcacatttcctgcggatcctaaaat 41199905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 17056264 - 17056302
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatag 39  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  17056264 ttgatcactaatcaattaaggctcacaattgataaatag 17056302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 37516746 - 37516704
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    |||||||| ||| |||||||||| |||||||||||||||||||    
T  37516746 ggaacctagatccttggcaaaatctgcaggaaatgtgtttcct 37516704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 340
Target Start/End: Complemental strand, 12909932 - 12909899
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaat 340  Q
    ||||||||||||||||||||||| ||||||||||    
T  12909932 ggaacctaaatctttggcaaaatctgcaggaaat 12909899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8331474 - 8331434
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||||||||   ||||||||||||||||||    
T  8331474 ttgatcactaatcaactaaggtccacaattgataaatagct 8331434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10238685 - 10238725
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||| |||||||||| |||| ||||||||||||||||||||    
T  10238685 ttgaacactaatcaattaaggctcacaattgataaatagct 10238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10244807 - 10244847
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||| |||||||||| |||| ||||||||||||||||||||    
T  10244807 ttgaacactaatcaattaaggctcacaattgataaatagct 10244847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 19269160 - 19269196
Alignment:
Q  181 gtcagtggcggagccaggaattttatagagcctgggc 217  Q
    ||||||||||||||||||||||  |||||||||||||    
T  19269160 gtcagtggcggagccaggaattacatagagcctgggc 19269196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 53652001 - 53651953
Alignment:
Q  308 gaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    ||||||||||| |||||||||| |||||||||||  |||||| ||||||    
T  53652001 gaacctaaatccttggcaaaatctgcaggaaatgcatttcctgcggaat 53651953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 5e-32; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 250 - 356
Target Start/End: Complemental strand, 13243249 - 13243143
Alignment:
Q  250 tgcgaataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    |||| ||||||||| ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||    
T  13243249 tgcggataatttcacatttcttgcggatcctaaaatcctaaggtattacctcacctgggaacctaaatccttggcaaaatctacaggaaatgtgtttcct 13243150  T
Q  350 acggaat 356  Q
     ||||||    
T  13243149 gcggaat 13243143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 246 - 349
Target Start/End: Original strand, 34282853 - 34282956
Alignment:
Q  246 ttcatgcgaataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtt 345  Q
    |||||||| ||||||||| ||||||||||||||| ||||||| | ||||||||||||||| ||||| |||||| |||||||||| |||||||||||||||    
T  34282853 ttcatgcggataatttcacatttcctgcggatcctaaaatcctatggtattacctcacctcggaacttaaatccttggcaaaatctgcaggaaatgtgtt 34282952  T
Q  346 tcct 349  Q
    ||||    
T  34282953 tcct 34282956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 39431638 - 39431728
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||| ||||| ||| ||||||| | ||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  39431638 tttcttgcgggtccgaaaatcctatggtattacctcacctaggaacctaaatctttggcaaaatctgcacgaaatgtgtttcctacggaat 39431728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 269
Target Start/End: Original strand, 36406378 - 36406463
Alignment:
Q  184 agtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttc 269  Q
    ||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||||| |||||||||||||| |||||    
T  36406378 agtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttc 36406463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 183 - 276
Target Start/End: Complemental strand, 38214953 - 38214860
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcgga 276  Q
    ||||||||||||||| ||||||||||||| |||||       ||||| |||||||||||||| ||| |||||||||||||| ||||||||||||    
T  38214953 cagtggcggagccagaaattttatagagcttgggcaaaaaaattatcgcaaaatgttacttcattcctgcgaataatttcacatttcctgcgga 38214860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 273
Target Start/End: Original strand, 27321753 - 27321840
Alignment:
Q  186 tggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||| ||||||| |||||||||||||||||||       ||||| |||||||||||||||||| |||||||||||||| |||| ||||    
T  27321753 tggcagagccagaaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacattttctgc 27321840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 2308538 - 2308597
Alignment:
Q  125 actgaatcagagtatagagccttagctgatcaagcagcagaagtagcatgacttaggtca 184  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| ||||| || ||||||    
T  2308538 actgagtcagagtatagagccttagctgatctagcagcagaagtggcatggctcaggtca 2308597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 2313732 - 2313791
Alignment:
Q  125 actgaatcagagtatagagccttagctgatcaagcagcagaagtagcatgacttaggtca 184  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| ||||| || ||||||    
T  2313732 actgagtcagagtatagagccttagctgatctagcagcagaagtggcatggctcaggtca 2313791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14417648 - 14417611
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaata 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14417648 ttgatcactaatcaactaagactcacaattgataaata 14417611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 24965239 - 24965149
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||| |||||||||||||||||||||||||||       ||||| |||||  |||||| |||  |||||||||||||| |||||||||    
T  24965239 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaaccttactttctttctgcgaataatttcacatttcctgc 24965149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 36406506 - 36406555
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    ||||||| |||| |||||||||| ||||||||||||||||||||||||||    
T  36406506 ggaacctcaatccttggcaaaatctgcaggaaatgtgtttcctacggaat 36406555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 35384256 - 35384341
Alignment:
Q  186 tggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcct 271  Q
    |||||||||||||||||||||||||| |||||       ||||| ||||| | |||||||||| | |||||||||||| |||||||    
T  35384256 tggcggagccaggaattttatagagcttgggcaaaaaatttatcgcaaaacggtacttccttcctacgaataatttcacatttcct 35384341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 39727757 - 39727797
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  39727757 ttgatcactaatcaactaagtctcacaattgataaatagct 39727797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 34282746 - 34282838
Alignment:
Q  181 gtcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||||||| | |||| ||||||||||||||||| |       ||||| || || |||||||||||| |||||||||||||| |||||||||    
T  34282746 gtcagtggcgtacccagaaattttatagagcctggacaaaaaatttatcgcacaacgttacttccttcctgcgaataatttcacatttcctgc 34282838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9934970 - 9934933
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaata 38  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  9934970 ttgatcactaatcaattaagactcacaattgataaata 9934933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 347
Target Start/End: Original strand, 21138070 - 21138115
Alignment:
Q  302 acctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttc 347  Q
    ||||||||||||||||| ||||||||||| |||||||| |||||||    
T  21138070 acctgggaacctaaatccttggcaaaattcgcaggaaacgtgtttc 21138115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 24965131 - 24965082
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| | |||||||| ||||||||||||||||||| ||||||    
T  24965131 ggaacctaaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaat 24965082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10705525 - 10705485
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  10705525 ttgatcactaatcaattaaggctcacaattgataaatagct 10705485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 24592195 - 24592227
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctg 214  Q
    |||||||||||||||||||||||||||||||||    
T  24592195 tcagtggcggagccaggaattttatagagcctg 24592227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32896699 - 32896659
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  32896699 ttgatcactaatcaattaaggctcacaattgataaatagct 32896659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36818659 - 36818619
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  36818659 ttgatcactaatcaattaaggctcacaattgataaatagct 36818619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 39736011 - 39736051
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  39736011 ttgatcactaatcaactaatgctcacaattgataaatagct 39736051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42033484 - 42033444
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  42033484 ttgatcactaatcaattaaggctcacaattgataaatagct 42033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 214
Target Start/End: Complemental strand, 39532551 - 39532520
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctg 214  Q
    ||||||||||||||||||||||||||||||||    
T  39532551 cagtggcggagccaggaattttatagagcctg 39532520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 16594862 - 16594828
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggc 217  Q
    |||||||||||||||||| ||||||||||||||||    
T  16594862 cagtggcggagccaggaaatttatagagcctgggc 16594828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 356
Target Start/End: Original strand, 27321882 - 27321916
Alignment:
Q  322 ggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||||||||||||||||||| ||||||    
T  27321882 ggcaaaatttgcaggaaatgtgtttcctgcggaat 27321916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 28928158 - 28928108
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgca-ggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| |||| ||||||||||||||| ||||||    
T  28928158 ggaacctaaatccttggcaaaatctgcagggaaatgtgtttcctgcggaat 28928108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 10699716 - 10699679
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaata 38  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  10699716 ttgatcactaatcaattaaggctcacaattgataaata 10699679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42993472 - 42993509
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaata 38  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  42993472 ttgatcactaatcaattaaggctcacaattgataaata 42993509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 211
Target Start/End: Original strand, 16532520 - 16532548
Alignment:
Q  183 cagtggcggagccaggaattttatagagc 211  Q
    |||||||||||||||||||||||||||||    
T  16532520 cagtggcggagccaggaattttatagagc 16532548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22220200 - 22220240
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| || || ||||||||||||||    
T  22220200 ttgatcactaatcaactaaggcttacgattgataaatagct 22220240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32890575 - 32890535
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| ||||  |||||||||||||||||||    
T  32890575 ttgatcactaatcaattaagggtcacaattgataaatagct 32890535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 5e-32; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 250 - 360
Target Start/End: Complemental strand, 4843459 - 4843349
Alignment:
Q  250 tgcgaataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    |||| ||||||||| ||||||||||||||| ||||||| || ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||| |    
T  4843459 tgcggataatttcacatttcctgcggatcctaaaatcccaatgtattacctcacctgggaacctaaatccttggcaaaatctgcatgaaatgtgtttcat 4843360  T
Q  350 acggaatgtac 360  Q
     ||||||||||    
T  4843359 gcggaatgtac 4843349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 250 - 349
Target Start/End: Original strand, 28694000 - 28694099
Alignment:
Q  250 tgcgaataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    |||| ||||||||| ||||||||||||||| ||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  28694000 tgcggataatttcacatttcctgcggatcctaaaatcctatggtattacctcacctgggaacctaaatcctgggcaaaatctgcaggaaatgtgtttcct 28694099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 250 - 356
Target Start/End: Complemental strand, 19377550 - 19377444
Alignment:
Q  250 tgcgaataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    |||| ||||||||| ||||||||||||||| ||||||| ||||||||||||||||| || ||||||||| |||||||||| |||||||||||| ||||||    
T  19377550 tgcggataatttcacatttcctgcggatcctaaaatcctaaggtattacctcacctagggacctaaatccttggcaaaatctgcaggaaatgtatttcct 19377451  T
Q  350 acggaat 356  Q
     ||||||    
T  19377450 tcggaat 19377444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 266 - 360
Target Start/End: Complemental strand, 3012449 - 3012355
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaatgtac 360  Q
    |||||||||||||| ||||||| | |||||||||||||||||||||||| ||| |||||||||| |||||||| |||||||||| ||||||||||    
T  3012449 tttcctgcggatcctaaaatcctatggtattacctcacctgggaacctatatccttggcaaaatctgcaggaagtgtgtttcctgcggaatgtac 3012355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 250 - 356
Target Start/End: Original strand, 21932739 - 21932845
Alignment:
Q  250 tgcgaataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    |||| ||||||||| | ||| ||||||||||||||||| | ||||||||||||||||| |||||||||| ||| |||||| |||||||||||||||||||    
T  21932739 tgcggataatttcacaattcatgcggatccaaaaatcctatggtattacctcacctggaaacctaaatccttgacaaaatctgcaggaaatgtgtttcct 21932838  T
Q  350 acggaat 356  Q
     ||||||    
T  21932839 gcggaat 21932845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 38128969 - 38129052
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    |||||||||||||| ||||||| | | |||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  38128969 tttcctgcggatcctaaaatcctatgatattgcctcacctgggaacctaaatccttggcaaaatatgcaggaaatgtgtttcct 38129052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 182 - 277
Target Start/End: Original strand, 22206573 - 22206668
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||||||||||| || |||||||||||||||||||       ||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  22206573 tcagtggcggagcaagaaattttatagagcctgggcaagaaaattatcgcaaaatgttacttccttcctgcgaataatttcacatttcctgcggat 22206668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 22228166 - 22228071
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||||||||||| || |||||||||||||||||||       ||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  22228166 tcagtggcggagcaagaaattttatagagcctgggcaagaaaattatcgcaaaatgttacttccttcctgcgaataatttcacatttcctgcggat 22228071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 21688254 - 21688164
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||||  ||||||| ||||||||| ||||||||  |||||||||| || ||||||| ||||||||||||||||||| ||||||    
T  21688254 tttcctgcggatcttaaaatcctaaggtattatctcacctgataacctaaatccttcgcaaaatctgcaggaaatgtgtttcctgcggaat 21688164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 273
Target Start/End: Original strand, 21932631 - 21932720
Alignment:
Q  184 agtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||||||| |||||||||||||||| ||||||       ||||| |||||||||||||| ||| |||||||||||||| |||||||||    
T  21932631 agtggcggagtcaggaattttatagagtctgggcaaaaaatttatcgcaaaatgttacttctttcctgcgaataatttcatatttcctgc 21932720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 277
Target Start/End: Original strand, 5991308 - 5991402
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||||||||| | | |||||||||||||||||||       ||||| |||||||||||||||||| |||||||||||| | ||||| |||||||    
T  5991308 cagtggcggagtcggaaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataattttacatttcttgcggat 5991402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 277
Target Start/End: Original strand, 28693891 - 28693985
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||| |||||||||||||||||||||||||||||       ||||| |||||  ||||||||||  |||||||||||||| ||||||| |||||    
T  28693891 cagtgacggagccaggaattttatagagcctgggcaaaaaaattatcgcaaaactttacttcctttctgcgaataatttcacatttcctccggat 28693985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 295 - 356
Target Start/End: Original strand, 41759613 - 41759674
Alignment:
Q  295 ttacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||| || |||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  41759613 ttacctcaactcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 41759674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 35300314 - 35300406
Alignment:
Q  181 gtcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||||||||||||||||||||||| ||||        |||||  |||| |||||||||||| | |||||||||||| |||||||||    
T  35300314 gtcagtggcggagccaggaattttatagagcttgggaaaaaaatttatcgtaaaacgttacttccttcttacgaataatttcacatttcctgc 35300406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 814961 - 815051
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||| ||| ||||| ||||| | ||||||||||||||| |||||||||||||  |||||||||| |||| ||||||| ||| || ||||||    
T  814961 tttcgtgcagatcctaaaattctaaggtattacctcacttgggaacctaaattcttggcaaaatctgcaagaaatgtattttctgcggaat 815051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 269
Target Start/End: Original strand, 26722846 - 26722933
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttc 269  Q
    |||||||| ||| ||||||||||||||||| |||||       ||||| ||||| |||||||||||| |||||||||||||| |||||    
T  26722846 tcagtggcagagtcaggaattttatagagcttgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttc 26722933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 291 - 349
Target Start/End: Original strand, 42439575 - 42439633
Alignment:
Q  291 ggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    ||||||||||| ||| |||||||||||| |||||||||| ||||| |||||||||||||    
T  42439575 ggtattacctctcctaggaacctaaatccttggcaaaatctgcagaaaatgtgtttcct 42439633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 277
Target Start/End: Original strand, 814861 - 814955
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    |||||||||||||||||||| ||||||| ||||||       ||||| ||||| |||||||| ||| ||| |||||||||| |||| ||||||||    
T  814861 cagtggcggagccaggaattatatagagtctgggcaaaaaaattatcgcaaaacgttacttcattcctgctaataatttcacattttctgcggat 814955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 7873112 - 7873202
Alignment:
Q  187 ggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||||||| | |||||||||||| ||||||       ||||| ||||||||||||||||||  || |||||||||| |||||||||||||    
T  7873112 ggcggagcctgaaattttatagagtctgggcaaaaaaattatcgcaaaatgttacttccttcccgctaataatttcacatttcctgcggat 7873202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 276
Target Start/End: Original strand, 25688102 - 25688192
Alignment:
Q  186 tggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcgga 276  Q
    |||||||||||| ||||||||||||||||||        |||||  ||||||||||||||||  || ||||||||||| ||||||||||||    
T  25688102 tggcggagccagaaattttatagagcctgggtaaaaaaattatcgtaaaatgttacttcctttctgtgaataatttcacatttcctgcgga 25688192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26380795 - 26380755
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  26380795 ttgatcactaatcaactaaggctcacaattgataaatagct 26380755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26383356 - 26383316
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  26383356 ttgatcactaatcaactaaggctcacaattgataaatagct 26383316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 276
Target Start/End: Complemental strand, 30852495 - 30852444
Alignment:
Q  225 ttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcgga 276  Q
    ||||| ||||||||| |||||||| |||||||||||||| ||||||||||||    
T  30852495 ttatcgcaaaatgttgcttccttcctgcgaataatttcacatttcctgcgga 30852444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 329
Target Start/End: Original strand, 41862334 - 41862397
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaat 329  Q
    ||||||| |||||| ||||||| |||||| ||||||| ||| ||||||||||| ||||||||||    
T  41862334 tttcctgtggatcctaaaatcctaaggtaatacctcatctgagaacctaaatccttggcaaaat 41862397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5849217 - 5849180
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaata 38  Q
    |||||||||||||||||||| |||||||||||||||||    
T  5849217 ttgatcactaatcaactaaggctcacaattgataaata 5849180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 26722955 - 26723004
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| ||| |||||| ||||||||||||||||||| ||||||    
T  26722955 ggaacctaaatccttgacaaaatctgcaggaaatgtgtttcctgcggaat 26723004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 35153001 - 35153038
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaata 38  Q
    |||||||||||||||||||| |||||||||||||||||    
T  35153001 ttgatcactaatcaactaaggctcacaattgataaata 35153038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 38991181 - 38991226
Alignment:
Q  311 cctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||| |||||||||| |||||||||||||||||| |||||||    
T  38991181 cctaaatccttggcaaaatctgcaggaaatgtgtttccaacggaat 38991226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 339068 - 339028
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| || |||||||||||||||||    
T  339068 ttgatcactaatcaactaaggctgacaattgataaatagct 339028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 351474 - 351434
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| || |||||||||||||||||    
T  351474 ttgatcactaatcaactaaggctgacaattgataaatagct 351434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3811641 - 3811681
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  3811641 ttgatcactaatcaactaaggcccacaattgataaatagct 3811681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28421431 - 28421471
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  28421431 ttgatcactaatcaattaaggctcacaattgataaatagct 28421471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35148481 - 35148521
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  35148481 ttgatcactaatcaactaaggctcataattgataaatagct 35148521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 3012549 - 3012469
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttca 263  Q
    ||||||||||||||| |||||||||||| ||||||       ||||  ||||| |||||||||||| || |||||||||||    
T  3012549 cagtggcggagccagaaattttatagagtctgggcaaaaaaattattgcaaaacgttacttccttcctgtgaataatttca 3012469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 346
Target Start/End: Original strand, 23704486 - 23704525
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgttt 346  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  23704486 ggaacctaaatccttggcaaaatctgcaggaaatgtgttt 23704525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 19400298 - 19400264
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggc 217  Q
    ||||||||||||||| |||||||||||||||||||    
T  19400298 cagtggcggagccagaaattttatagagcctgggc 19400264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 20965993 - 20965959
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggc 217  Q
    |||||||||||||||||| ||||||||||||||||    
T  20965993 cagtggcggagccaggaaatttatagagcctgggc 20965959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 3817786 - 3817823
Alignment:
Q  4 atcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  3817786 atcactaatcaactaaggcccacaattgataaatagct 3817823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 214
Target Start/End: Original strand, 38575125 - 38575158
Alignment:
Q  181 gtcagtggcggagccaggaattttatagagcctg 214  Q
    ||||||||||||||||||||||| ||||||||||    
T  38575125 gtcagtggcggagccaggaatttcatagagcctg 38575158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 250 - 356
Target Start/End: Complemental strand, 767437 - 767331
Alignment:
Q  250 tgcgaataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    |||| ||||||||| ||||||||| ||||| ||||||| |||||||||||||||||||||| ||||||| |||||||||  || ||||||||||||||||    
T  767437 tgcggataatttcacatttcctgcagatcctaaaatcctaaggtattacctcacctgggaatctaaatccttggcaaaacctgtaggaaatgtgtttcct 767338  T
Q  350 acggaat 356  Q
     ||||||    
T  767337 gcggaat 767331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 16667458 - 16667548
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||| ||||||||| ||||||| | ||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  16667458 tttcttgcggatcctaaaatcctatggtattacctcacatgggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 16667548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 17192634 - 17192724
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||||| ||||||||| |||||||||||| ||||||||||||||| ||| |||||| |||||||||||| |||||| ||||||    
T  17192634 tttcctgcggatcctaaaatccaatggtattacctcatctgggaacctaaatccttgacaaaatctgcaggaaatgtatttcctgcggaat 17192724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 174 - 273
Target Start/End: Complemental strand, 35469139 - 35469040
Alignment:
Q  174 gacttaggtcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||| |||||||| |||||||||||||||||||||||||||       ||||| |||||||||||||||||| |||||||||||||| |||||||||    
T  35469139 gacttagttcagtggctgagccaggaattttatagagcctgggcaaaaaatttatcgcaaaatgttacttccttcctgcgaataatttcacatttcctgc 35469040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 15504055 - 15503972
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    ||||| |||||||| ||||||| | |||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||    
T  15504055 tttcccgcggatcctaaaatcctatggtattacctcatctgggaacctaaatccttggcaaaatctgcaggaaatgtgtttcct 15503972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 21069148 - 21069058
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    ||||||| |||||| ||||||| | ||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  21069148 tttcctgtggatcctaaaatcctatggtataacctcacctaggaacctaaatctttggcaaaatctgcaggaaatgtgtttcttgcggaat 21069058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 13942738 - 13942821
Alignment:
Q  260 ttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtg 343  Q
    |||| ||||||||||||||| ||||||| ||||||||||||||||||  || ||||||| |||||||||| |||||||||||||    
T  13942738 ttcacatttcctgcggatcctaaaatcctaaggtattacctcacctgataatctaaatccttggcaaaatctgcaggaaatgtg 13942821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 33007114 - 33007019
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||||||||||||||||||||||||||| ||||||       ||||| ||||| |||||||||||| |||||||||||||| ||||||| |||||    
T  33007114 tcagtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggat 33007019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 34846574 - 34846479
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    |||||||||||||||||||||||||||||||||| |       ||||| ||||| |||||||||||| |||||||||||||| ||||||| |||||    
T  34846574 tcagtggcggagccaggaattttatagagcctggacaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggat 34846479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 273
Target Start/End: Original strand, 1672375 - 1672465
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||||||| |||||||||||||||||||       ||||| |||||||||||||||||| |||||||||||||| |||| ||||    
T  1672375 cagtggcggagccagaaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacattttctgc 1672465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 277
Target Start/End: Original strand, 7161972 - 7162066
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||||||||||||| |||||||||||||||||||       ||||| |||||||||||||||||| ||| |||||||||| |||||||| ||||    
T  7161972 cagtggcggagccagaaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcaaataatttcacatttcctgtggat 7162066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 15675540 - 15675451
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctg 272  Q
    |||||||||||| ||||||||||||||||||||||       ||||| ||||| |||||||||||| |||||||||||||| ||||||||    
T  15675540 cagtggcggagctaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctg 15675451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 183 - 276
Target Start/End: Complemental strand, 37552141 - 37552048
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcgga 276  Q
    |||||| |||||||| |||||||||||||||||||       ||||  |||||||||||||||||| |||||||||||||| ||||||||||||    
T  37552141 cagtggtggagccagaaattttatagagcctgggcaaaaaaattattgcaaaatgttacttccttcctgcgaataatttcacatttcctgcgga 37552048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 183 - 276
Target Start/End: Complemental strand, 37654971 - 37654878
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcgga 276  Q
    |||||| |||||||| |||||||||||||||||||       ||||  |||||||||||||||||| |||||||||||||| ||||||||||||    
T  37654971 cagtggtggagccagaaattttatagagcctgggcaaaaaaattattgcaaaatgttacttccttcctgcgaataatttcacatttcctgcgga 37654878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 183 - 277
Target Start/End: Original strand, 13942641 - 13942735
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||||||||||||| ||||||||||||||||||        ||||| ||||| |||||||||||| |||||||||||||| |||||||| ||||    
T  13942641 cagtggcggagccagaaattttatagagcctgggtaaaaaaattatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgtggat 13942735  T

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Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 183 - 277
Target Start/End: Complemental strand, 16568018 - 16567924
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||||||||| ||| ||||||||||||| |||||       ||||| |||||||||||||||||| || ||||||||||| |||||||||||||    
T  16568018 cagtggcggagtcagaaattttatagagcttgggcaaaaaaattatcgcaaaatgttacttccttcctgggaataatttcacatttcctgcggat 16567924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 6900952 - 6900900
Alignment:
Q  225 ttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  6900952 ttatcgcaaaatgttacttccttcatgcgaataatttcacatttcctgcggat 6900900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 2476592 - 2476502
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||||||| |||| ||||||||||||||       ||||| ||||| |||||||||||| | |||||||||||| |||||||||    
T  2476592 cagtggcggagccagaaattatatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgc 2476502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 266 - 339
Target Start/End: Original strand, 8214628 - 8214701
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaa 339  Q
    |||||||||||||| ||||||| || ||||||||||||||  ||||||||||| ||| |||||| |||||||||    
T  8214628 tttcctgcggatcctaaaatcctaaagtattacctcacctaagaacctaaatccttgacaaaatctgcaggaaa 8214701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 277
Target Start/End: Original strand, 12267271 - 12267365
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    |||||||||||||||  ||||||||||||||||||       ||||| ||||| |||||||||||| || ||||||||||| |||| ||||||||    
T  12267271 cagtggcggagccagacattttatagagcctgggcaaaaagtttatcgcaaaacgttacttccttcctgtgaataatttcacattttctgcggat 12267365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 273
Target Start/End: Original strand, 14832699 - 14832789
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||||||| |||||||||||| ||||||       ||||| |||||  ||||||||||| |||||||||||||| |||||||||    
T  14832699 cagtggcggagccagaaattttatagagtctgggcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgc 14832789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 15504176 - 15504086
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||||||| |||| |||||||||| | |       ||||| |||||||||||||||||| |||||||||||||| |||||||||    
T  15504176 cagtggcggagccagaaattatatagagcctcgacaaaaaatttatcgcaaaatgttacttccttcctgcgaataatttcacatttcctgc 15504086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 33007005 - 33006956
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  33007005 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctacggaat 33006956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7390020 - 7390060
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7390020 ttgatcactaatcaactaagactcacaattgataaatagct 7390060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 12267368 - 12267464
Alignment:
Q  260 ttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||| ||||||||||||||| ||||||| | |||||||||||||||  ||| ||||||   ||||||||| | ||||||||||||||| | ||||||    
T  12267368 ttcacatttcctgcggatcctaaaatcctatggtattacctcacctacgaatctaaattcgtggcaaaatctacaggaaatgtgtttcttgcggaat 12267464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 273
Target Start/End: Original strand, 32953555 - 32953646
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||||||   |||||||||||||||| ||       ||||| |||||||||||||||||| | |||||||||||| |||||||||    
T  32953555 tcagtggcggagccgtaaattttatagagcctgtgcaaaaaagttatcgcaaaatgttacttccttcctacgaataatttcacatttcctgc 32953646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 349
Target Start/End: Original strand, 36234536 - 36234630
Alignment:
Q  255 ataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    ||||||||| ||||||||||||||| |||||   | ||||| ||||||||| ||||| |||| | |||| ||||| ||||||||||| |||||||    
T  36234536 ataatttcacatttcctgcggatcctaaaatgttatggtatcacctcacctaggaacttaaacccttggtaaaatctgcaggaaatgcgtttcct 36234630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 269
Target Start/End: Original strand, 43228530 - 43228617
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttc 269  Q
    |||||||||||||||| |||||||||||||||||||       | ||| |||||||||||| | ||| |||||||||||||| |||||    
T  43228530 tcagtggcggagccagaaattttatagagcctgggcaaaaaactaatcgcaaaatgttactcctttcctgcgaataatttcatatttc 43228617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 30249063 - 30249014
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  30249063 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 30249014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 35469001 - 35468952
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  35469001 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 35468952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20499825 - 20499785
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  20499825 ttgatcactaatcaattaagactcacaattgataaatagct 20499785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41296966 - 41296926
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  41296966 ttgatcactaatcaactaaggctcacaattgataaatagct 41296926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 273
Target Start/End: Complemental strand, 34444195 - 34444103
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnn-ttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||||| |||||||||| |||||||||||        ||||| ||||| |||||||||||| | |||||||||||| |||||||||    
T  34444195 tcagtggcggagctaggaattttagagagcctgggcaaaaaaaattatcgcaaaacgttacttccttcctacgaataatttcacatttcctgc 34444103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 15675411 - 15675362
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    ||||| |||||| |||||||||| ||||||||||||||||||| ||||||    
T  15675411 ggaacttaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 15675362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12686651 - 12686691
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  12686651 ttgatcactaatcaattaaggctcacaattgataaatagct 12686691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12692753 - 12692793
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  12692753 ttgatcactaatcaattaaggctcacaattgataaatagct 12692793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28525858 - 28525898
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  28525858 ttgatcactaatcaactaaggcccacaattgataaatagct 28525898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28531954 - 28531994
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  28531954 ttgatcactaatcaactaaggcccacaattgataaatagct 28531994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 36234485 - 36234529
Alignment:
Q  225 ttatctcaaaatgttacttccttcatgcgaataatttcaaatttc 269  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||    
T  36234485 ttatcgcaaaatgttacttccttcttgcgaataatttcacatttc 36234529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 37779821 - 37779777
Alignment:
Q  232 aaaatgttacttccttcatgcgaataatttcaaatttcctgcgga 276  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||    
T  37779821 aaaatgttacttccttccagcgaataatttcacatttcctgcgga 37779777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 2985919 - 2985885
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggc 217  Q
    |||||||||||||||||||| ||||||||||||||    
T  2985919 cagtggcggagccaggaattatatagagcctgggc 2985885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 12448275 - 12448241
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctggg 216  Q
    ||||||||||||||||||| |||||||||||||||    
T  12448275 tcagtggcggagccaggaaatttatagagcctggg 12448241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 31649080 - 31649114
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggc 217  Q
    |||||||||||||||||| ||||||||||||||||    
T  31649080 cagtggcggagccaggaaatttatagagcctgggc 31649114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32094694 - 32094732
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatag 39  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  32094694 ttgatcactaatcaattaaggctcacaattgataaatag 32094732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 356
Target Start/End: Original strand, 32953688 - 32953722
Alignment:
Q  322 ggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||| ||||||||||||||||||||||||||    
T  32953688 ggcaaaatctgcaggaaatgtgtttcctacggaat 32953722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 339
Target Start/End: Complemental strand, 6900873 - 6900800
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaa 339  Q
    ||||| |||||||| ||||||| ||  ||||| || | ||||||||||||||| ||| |||||| |||||||||    
T  6900873 tttcccgcggatcctaaaatcctaaaatattatctaatctgggaacctaaatccttgacaaaatctgcaggaaa 6900800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25408437 - 25408474
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaata 38  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  25408437 ttgatcactaatcaattaaggctcacaattgataaata 25408474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 34846465 - 34846416
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| || ||||||||||||| || ||||||    
T  34846465 ggaacctaaatccttggcaaaatctgtaggaaatgtgtttactgcggaat 34846416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8706859 - 8706899
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||||| |||| |||||||||||||    
T  8706859 ttgatcactaatcaattaagacccacagttgataaatagct 8706899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32097494 - 32097534
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||| ||| |||| ||||||||||||||||||||    
T  32097494 ttgatcactaaccaattaaggctcacaattgataaatagct 32097534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 37607614 - 37607570
Alignment:
Q  232 aaaatgttacttccttcatgcgaataatttcaaatttcctgcgga 276  Q
    |||||||||||||||||  || |||||||||| ||||||||||||    
T  37607614 aaaatgttacttccttccagcaaataatttcacatttcctgcgga 37607570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 183 - 356
Target Start/End: Complemental strand, 339566 - 339385
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggatccaaa 282  Q
    |||||||||||| || ||||||||||||| |||||       ||||| |||||||||||||||||| ||| | |||||||| ||||||||||||| | ||    
T  339566 cagtggcggagctagaaattttatagagcttgggcaaaaaatttatcgcaaaatgttacttccttcctgcaattaatttcacatttcctgcggattctaa 339467  T
Q  283 aatccaaaggtattac--------ctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    ||  | | ||||||||        |||||||||||||||||||| |||| ||||| |||||||||||| |||||||||||||    
T  339466 aagtctatggtattacactattacctcacctgggaacctaaatccttggtaaaatctgcaggaaatgtatttcctacggaat 339385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 2836176 - 2836266
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||||| ||||||| | |||||||||||||||||||||||||||| ||| |||||| |||||||||||| |||||| ||||||    
T  2836176 tttcctgcggatcctaaaatcctatggtattacctcacctgggaacctaaatccttgacaaaatctgcaggaaatgtatttcctgcggaat 2836266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 277
Target Start/End: Complemental strand, 2960899 - 2960806
Alignment:
Q  184 agtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    |||||||||||||| |||||||||||||||| ||       ||||  |||||||||||||||||| |||||||||||||| |||||||||||||    
T  2960899 agtggcggagccagaaattttatagagcctgagcgaaaaaattattgcaaaatgttacttccttcttgcgaataatttcacatttcctgcggat 2960806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 273
Target Start/End: Complemental strand, 2941451 - 2941360
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||| ||||||||||||||||||||||||||||       ||||| ||||| |||||||||||| | |||||||||||| |||||||||    
T  2941451 tcagtggtggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgc 2941360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 1780933 - 1781025
Alignment:
Q  185 gtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||| |||||||||||||||||||| ||||||       ||||| ||||| |||||||||||| |||||||||||||| ||||||| |||||    
T  1780933 gtggcagagccaggaattttatagagtctgggcataaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggat 1781025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 250 - 329
Target Start/End: Complemental strand, 34188938 - 34188859
Alignment:
Q  250 tgcgaataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaat 329  Q
    |||| ||||||||| ||||||||||||||| ||||||| |||||||||| ||||||| ||| ||||||| |||| |||||    
T  34188938 tgcggataatttcacatttcctgcggatcctaaaatcctaaggtattacttcacctgagaatctaaatcattggtaaaat 34188859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 10397698 - 10397784
Alignment:
Q  184 agtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcc 270  Q
    ||||||||| ||||||||||||||||| ||||||       ||||| ||||| |||||||||||| |||||||||||||| ||||||    
T  10397698 agtggcggaaccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcc 10397784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8651276 - 8651316
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8651276 ttgatcactaatcaactaagactcacaattgataaatagct 8651316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 273
Target Start/End: Complemental strand, 9696276 - 9696193
Alignment:
Q  190 ggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||||| |||||||||||| ||||||       ||||| ||||| |||||||||||| |||||||||||||| |||||||||    
T  9696276 ggagccagaaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgc 9696193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 273
Target Start/End: Original strand, 28614291 - 28614382
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||| |||| ||| |||||||||||||||| ||       ||||| |||||||||||||||||| |||||||||||||| |||| ||||    
T  28614291 tcagtggtggaggcagaaattttatagagcctgtgcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacattttctgc 28614382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 10397809 - 10397858
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  10397809 ggaacctaaatccttggcaaaatatgcaggaaatgtgtttcctgcggaat 10397858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 277
Target Start/End: Original strand, 31188200 - 31188294
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 277  Q
    ||||| |||||||| ||||||||||||||||||||       ||||| ||||| |||||||||||| || ||||||||||| |||| || |||||    
T  31188200 cagtgacggagccatgaattttatagagcctgggcaaaaaaattatcgcaaaacgttacttccttcctgtgaataatttcacattttctacggat 31188294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 273
Target Start/End: Original strand, 34248901 - 34248991
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||| |||| || ||||||||||||||||||||       ||||| ||||| |||||||||||| |||| ||||||||| |||||||||    
T  34248901 cagtggtggagtcaagaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcggataatttcacatttcctgc 34248991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 273
Target Start/End: Original strand, 23663648 - 23663737
Alignment:
Q  184 agtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||| ||||||||||||||||||||||||         ||||| ||||| |||||||| ||| |||||||||||||| |||||||||    
T  23663648 agtggcgcagccaggaattttatagagcctggataaaaaatttatcgcaaaacgttacttcattcctgcgaataatttcacatttcctgc 23663737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 1781039 - 1781081
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  1781039 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcct 1781081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 2941321 - 2941279
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  2941321 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcct 2941279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 273
Target Start/End: Original strand, 14938809 - 14938900
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||| ||||| ||| ||||||||||||| |||||       ||||| ||||||||||||| |||| || ||||||||||| |||||||||    
T  14938809 tcagtgacggagtcagaaattttatagagcttgggcaaaaaaattatcgcaaaatgttactttcttcctgggaataatttcacatttcctgc 14938900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21783798 - 21783836
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatag 39  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  21783798 ttgatcactaatccactaagactcacaattgataaatag 21783836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 9046932 - 9046981
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| ||| |||||| ||||||||||||||||||| ||||||    
T  9046932 ggaacctaaatccttgacaaaatctgcaggaaatgtgtttcctgcggaat 9046981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 9696154 - 9696105
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| |||||||||| |||||||| ||||||    
T  9696154 ggaacctaaatccttggcaaaatctgcaggaaatatgtttcctgcggaat 9696105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 23663776 - 23663825
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    ||||| |||||| |||||||||| ||||||||||||||||||| ||||||    
T  23663776 ggaacataaatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 23663825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31756691 - 31756728
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaata 38  Q
    |||||||||||||||||||||| |||||||||||||||    
T  31756691 ttgatcactaatcaactaagacccacaattgataaata 31756728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4580794 - 4580834
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  4580794 ttgatcactaatcaattaaggctcacaattgataaatagct 4580834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21771037 - 21771077
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  21771037 ttgatcactaatcaattaaggctcacaattgataaatagct 21771077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25353900 - 25353860
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  25353900 ttgatcactaatcaattaaggctcacaattgataaatagct 25353860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 273
Target Start/End: Complemental strand, 15529172 - 15529084
Alignment:
Q  185 gtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||| ||||||||||||||||||| |||       ||||| |||||  ||||||| ||| | |||||||||||| |||||||||    
T  15529172 gtggcggagtcaggaattttatagagcctaggcaaaaaatttatcgcaaaacattacttctttcctacgaataatttcacatttcctgc 15529084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 15122142 - 15122100
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    ||||| |||||| |||||||||| |||||||||||||||||||    
T  15122142 ggaacgtaaatccttggcaaaatctgcaggaaatgtgtttcct 15122100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 34249030 - 34249072
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcct 349  Q
    |||||||||| | |||||||||| |||||||||||||||||||    
T  34249030 ggaacctaaacccttggcaaaatctgcaggaaatgtgtttcct 34249072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 15122271 - 15122181
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||| ||||||||||||||||  |||||       ||||| ||||| ||||||| |||  |||||||||||||| |||| ||||    
T  15122271 cagtggcggagtcaggaattttatagagtttgggcaaaaaatttatcgcaaaacgttactttctttctgcgaataatttcacattttctgc 15122181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 2836109 - 2836145
Alignment:
Q  237 gttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||||||||| |||||||||||||| |||||||||    
T  2836109 gttacttccttcctgcgaataatttcacatttcctgc 2836145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 238 - 356
Target Start/End: Original strand, 109247 - 109365
Alignment:
Q  238 ttacttccttcatgcgaataatttcaaatttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcagga 337  Q
    ||||||||||| ||||||||||||||  ||||||| |||||| ||||||| | ||||||| |||||||||||||||||||  || ||||||| ||||| |    
T  109247 ttacttccttcctgcgaataatttcacgtttcctgtggatcctaaaatcctatggtattatctcacctgggaacctaaattcttagcaaaatctgcagaa 109346  T
Q  338 aatgtgtttcctacggaat 356  Q
     |||||||| || ||||||    
T  109347 catgtgttttctgcggaat 109365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 266 - 344
Target Start/End: Original strand, 112193 - 112271
Alignment:
Q  266 tttcctgcggatccaaaaatccaaaggtattacctcacctgggaacctaaatctttggcaaaatttgcaggaaatgtgt 344  Q
    |||||||||||||| ||||||| | |||||||||||| ||||||||||||||  || ||| ||| ||||| ||||||||    
T  112193 tttcctgcggatcctaaaatcctatggtattacctcatctgggaacctaaattcttagcagaatctgcagaaaatgtgt 112271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 276
Target Start/End: Complemental strand, 4306 - 4212
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcgga 276  Q
    |||||||||||||||  |||||||||||||||||||       ||||| |||||||||||||||||| |||||||||||||| ||||||| ||||    
T  4306 tcagtggcggagccataaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacatttcctacgga 4212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 356
Target Start/End: Complemental strand, 4194 - 4160
Alignment:
Q  322 ggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||| ||||||||||||||||||||||||||    
T  4194 ggcaaaatctgcaggaaatgtgtttcctacggaat 4160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 273
Target Start/End: Complemental strand, 1924 - 1833
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    ||||||||||||||||||||||||||||| ||||||       ||||| ||||| |||||||||||  |||||||||||||| |||||||||    
T  1924 tcagtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttcctttctgcgaataatttcacatttcctgc 1833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 273
Target Start/End: Complemental strand, 11752 - 11661
Alignment:
Q  182 tcagtggcggagccaggaattttatagagcctgggcnnnnnnnttatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgc 273  Q
    |||||||||||||||||||||||||||| |||||||       ||||| ||||| |||||||||||| | |||||||||||| |||||||||    
T  11752 tcagtggcggagccaggaattttatagaacctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgc 11661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 7009 - 6960
Alignment:
Q  307 ggaacctaaatctttggcaaaatttgcaggaaatgtgtttcctacggaat 356  Q
    |||||||||||| |||||||||| |||||||||||  |||||| ||||||    
T  7009 ggaacctaaatccttggcaaaatctgcaggaaatgcatttccttcggaat 6960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 1071 - 1108
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaata 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1071 ttgatcactaatcaactaagactcacaattgataaata 1108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 20925 - 20983
Alignment:
Q  234 aatgttacttccttcatgcgaataatttcaaatttcctgcggatccaaaaatccaaagg 292  Q
    ||||||||||||||| |||| |||||| || ||||||||||||||| ||||||| ||||    
T  20925 aatgttacttccttcctgcggataattgcacatttcctgcggatcctaaaatcctaagg 20983  T

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Target: scaffold0440 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1660 - 1700
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  1660 ttgatcactaatcaactaaggcccacaattgataaatagct 1700  T

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Target: scaffold0208 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 12082 - 12042
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaatagct 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  12082 ttgatcactaatcaattaaggctcacaattgataaatagct 12042  T

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Target: scaffold0012 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 173362 - 173398
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaat 37  Q
    |||||||||||||||||||||| ||||||||||||||    
T  173362 ttgatcactaatcaactaagacccacaattgataaat 173398  T

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Target: scaffold0168 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 16099 - 16065
Alignment:
Q  183 cagtggcggagccaggaattttatagagcctgggc 217  Q
    ||||||||||||||||||||| |||||||||||||    
T  16099 cagtggcggagccaggaatttcatagagcctgggc 16065  T

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Target: scaffold0185 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5654 - 5617
Alignment:
Q  1 ttgatcactaatcaactaagactcacaattgataaata 38  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  5654 ttgatcactaatcaattaaggctcacaattgataaata 5617  T

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