View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14224_low_7 (Length: 258)
Name: NF14224_low_7
Description: NF14224
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14224_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 45863907 - 45864181
Alignment:
| Q |
1 |
ccgtgtggaacacgctccgaagagtcaactgttaataagttgagtttgacgagaagcttgttgaagccggtaacgggcttaaaatcaaagtca------- |
93 |
Q |
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| T |
45863907 |
ccgtgtggaacacgctccgaagagtcaactgttaacaagttgagtttgacgagaagcttgttgaagccggtaacgggcttaaaatcaaagtcaccagtgg |
45864006 |
T |
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| Q |
94 |
--------------ttggcactaacagagtcttgtttaagagtagaatttgaagatgatgagtaacaagaatagtgaaatttgaagggtttgggtttggg |
179 |
Q |
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| T |
45864007 |
gaaaatcattgtcattggcactaacagagtcttgtttaagagtagaatttgaagatgatgagtaacaagaatagtgaaatttgaagggtttgggtttggg |
45864106 |
T |
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| Q |
180 |
tttgagaatgcgctgagtgagaaagcgttggagttgaaagcgagtagtcatgaaggatgatggtggtgatgatgt |
254 |
Q |
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| T |
45864107 |
tttgagaatgcgctgagtgagaaagcgttggagttgaaagcgagtagtcatgaaggatgatggtggtgatgatgt |
45864181 |
T |
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