View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14225_high_19 (Length: 232)
Name: NF14225_high_19
Description: NF14225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14225_high_19 |
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Alignment Details
Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 17 - 218
Target Start/End: Complemental strand, 41736092 - 41735891
Alignment:
| Q |
17 |
accaccaaatgttgctacttgctcagctttattatatagaaaataaaataattaatttgacttgtttgaattatttaattttcagattaagtggctgaaa |
116 |
Q |
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| T |
41736092 |
accaccaaatgttgctacttgctcagctttattatatagaaaataaaataattaatttgacttgtttgaattatctaattttcagattaagtggctgaaa |
41735993 |
T |
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| Q |
117 |
catatgaatttgtgatgaatatttgatactatgttttttatgttgaacggttattacttattatgagaaatcacgagcacgcaaattataagtaagaata |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41735992 |
catatgaatttgtgatgaatatttgatactatgttttttatgttgaacggttattacttattatgagaaatcacgagcacgcaaattataagtaagaata |
41735893 |
T |
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| Q |
217 |
at |
218 |
Q |
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|| |
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| T |
41735892 |
at |
41735891 |
T |
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