View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14225_high_20 (Length: 229)
Name: NF14225_high_20
Description: NF14225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14225_high_20 |
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Alignment Details
Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 40048026 - 40048224
Alignment:
| Q |
18 |
atcaagaggaagcaaaacctcatccaaacgatatatagcaagcttgttatcttgatagactacaccagtaacactagcattaaccacaccagttgaaaga |
117 |
Q |
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| T |
40048026 |
atcaagaggaagcaaaaccttatccaaacgatatatagcaagcttgttatcttgatagactacaccagtaacactagcattaaccacaccagttgaaaga |
40048125 |
T |
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| Q |
118 |
ctaacactggtaccaaacgattcgatgttcaatggaagctttaaagggtctttaccagccactgtctcaacagggttactaagagaatcaaagttattg |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40048126 |
ctaacactggtaccaaacgattcgatgttcaatggaagctttaaagggtctttaccagccactgtctcaacagggttactaagagaatcaaagttattg |
40048224 |
T |
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