View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14226_low_12 (Length: 333)
Name: NF14226_low_12
Description: NF14226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14226_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 16 - 315
Target Start/End: Complemental strand, 2624625 - 2624326
Alignment:
| Q |
16 |
aatataaaagatcacaattcaattgcgacaaatatctatatagaaaaaattgctacctgtgattctatcgtatacatcagccgcagattcaccatttgga |
115 |
Q |
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| T |
2624625 |
aatataaaagatcacaattcaattgcgacaaatatctatatagaaaaaattgctacctgtgattctatcgtatacatcagccgcagattcaccatttgga |
2624526 |
T |
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| Q |
116 |
aatcggtaaaagaaacgaccataaagatggcgttgcgctttttcaactttcatcaactctctattttgaaaattcccttacataacataaatcacaaaga |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2624525 |
aatcggtaaaagaaacgaccataaagatggcgttgcgctttttcaactttcatcaactctctattttgaaaattcccttacataacataaatcacaaaga |
2624426 |
T |
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| Q |
216 |
aacaataaataaatttgagaacataccaatatacaagacagaaaactaaactaggtagaaaaacttttgaattagttaattaattattcaataccgaaat |
315 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2624425 |
aacaataaataaatttgagaacatatcaatatacaagacagaaaactaaattaggtagaaaaacttttgaattagttaattaattattcaataccgaaat |
2624326 |
T |
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