View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14227_low_3 (Length: 558)

Name: NF14227_low_3
Description: NF14227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14227_low_3
NF14227_low_3
[»] chr3 (38 HSPs)
chr3 (22-489)||(28689141-28689609)
chr3 (168-452)||(26279434-26279721)
chr3 (177-432)||(52374572-52374828)
chr3 (247-432)||(8420240-8420426)
chr3 (248-456)||(42453302-42453503)
chr3 (168-432)||(49393005-49393268)
chr3 (248-424)||(54574834-54575011)
chr3 (247-378)||(32319161-32319292)
chr3 (247-343)||(8073344-8073440)
chr3 (248-343)||(27078576-27078671)
chr3 (248-343)||(27084373-27084468)
chr3 (274-424)||(29598030-29598179)
chr3 (249-343)||(47467688-47467782)
chr3 (248-343)||(53506891-53506986)
chr3 (248-335)||(54407165-54407252)
chr3 (248-343)||(54619210-54619305)
chr3 (248-338)||(37168376-37168466)
chr3 (248-338)||(38681100-38681190)
chr3 (249-343)||(42098805-42098899)
chr3 (248-343)||(3953903-3953998)
chr3 (248-343)||(21582775-21582870)
chr3 (248-378)||(25855390-25855520)
chr3 (248-343)||(34290643-34290738)
chr3 (248-343)||(43207245-43207339)
chr3 (248-343)||(44708481-44708576)
chr3 (276-343)||(29620423-29620490)
chr3 (248-300)||(18372530-18372582)
chr3 (248-319)||(36716032-36716103)
chr3 (249-343)||(53149322-53149416)
chr3 (168-237)||(23641243-23641312)
chr3 (252-335)||(9878698-9878781)
chr3 (248-338)||(36605974-36606064)
chr3 (249-300)||(50258631-50258682)
chr3 (248-343)||(50939240-50939335)
chr3 (252-389)||(789893-790031)
chr3 (473-518)||(28689746-28689791)
chr3 (252-300)||(23641329-23641377)
chr3 (345-389)||(36179604-36179649)
[»] chr2 (40 HSPs)
chr2 (162-456)||(21665621-21665916)
chr2 (168-456)||(38400684-38400974)
chr2 (193-456)||(24035496-24035761)
chr2 (274-456)||(37182556-37182739)
chr2 (252-456)||(16227379-16227584)
chr2 (198-432)||(11912712-11912950)
chr2 (268-455)||(12134067-12134254)
chr2 (248-456)||(13800551-13800760)
chr2 (329-456)||(29694270-29694398)
chr2 (168-376)||(16096973-16097184)
chr2 (248-343)||(29939869-29939964)
chr2 (279-456)||(11952644-11952822)
chr2 (248-378)||(28425717-28425847)
chr2 (248-343)||(24410437-24410532)
chr2 (247-343)||(8907085-8907181)
chr2 (248-343)||(3155217-3155312)
chr2 (248-343)||(4505894-4505989)
chr2 (248-343)||(6965007-6965102)
chr2 (248-362)||(7742140-7742255)
chr2 (248-343)||(12337455-12337550)
chr2 (249-343)||(3953006-3953100)
chr2 (249-343)||(7162784-7162878)
chr2 (248-343)||(9046029-9046125)
chr2 (248-425)||(10252324-10252511)
chr2 (248-343)||(10762572-10762667)
chr2 (168-237)||(37182751-37182820)
chr2 (248-317)||(40636164-40636233)
chr2 (248-343)||(26716128-26716224)
chr2 (324-389)||(37622423-37622490)
chr2 (165-228)||(12694795-12694858)
chr2 (248-338)||(27506747-27506837)
chr2 (248-298)||(34694020-34694070)
chr2 (248-298)||(34716432-34716482)
chr2 (168-229)||(11952515-11952576)
chr2 (168-237)||(42029256-42029325)
chr2 (269-349)||(22727530-22727610)
chr2 (167-229)||(7742054-7742116)
chr2 (248-294)||(42029194-42029240)
chr2 (268-317)||(5952742-5952791)
chr2 (188-237)||(44914850-44914899)
[»] chr4 (50 HSPs)
chr4 (162-456)||(36118378-36118672)
chr4 (161-456)||(52468178-52468474)
chr4 (254-456)||(40217122-40217327)
chr4 (248-507)||(45656027-45656276)
chr4 (168-456)||(27111923-27112211)
chr4 (183-446)||(24396837-24397102)
chr4 (168-432)||(39329317-39329583)
chr4 (252-456)||(2135331-2135533)
chr4 (248-456)||(36178564-36178773)
chr4 (248-456)||(36362877-36363085)
chr4 (250-456)||(15734988-15735189)
chr4 (268-431)||(4167917-4168082)
chr4 (249-349)||(37744916-37745017)
chr4 (268-344)||(35779351-35779427)
chr4 (248-343)||(32128590-32128685)
chr4 (359-450)||(37746839-37746930)
chr4 (248-343)||(54780783-54780878)
chr4 (168-348)||(10041924-10042106)
chr4 (247-343)||(37777228-37777324)
chr4 (248-343)||(10978906-10979001)
chr4 (248-343)||(34027585-34027680)
chr4 (248-343)||(34768580-34768675)
chr4 (248-343)||(38209597-38209692)
chr4 (248-343)||(43455537-43455632)
chr4 (248-390)||(51691921-51692066)
chr4 (250-335)||(13460221-13460306)
chr4 (248-343)||(2790747-2790842)
chr4 (268-343)||(40089522-40089597)
chr4 (248-343)||(47128993-47129088)
chr4 (248-343)||(48209246-48209341)
chr4 (249-343)||(32915391-32915485)
chr4 (249-337)||(37514671-37514759)
chr4 (249-343)||(1105538-1105632)
chr4 (252-345)||(5128852-5128945)
chr4 (162-227)||(24614077-24614142)
chr4 (255-391)||(29425187-29425323)
chr4 (162-237)||(5893125-5893200)
chr4 (248-343)||(54083248-54083343)
chr4 (248-318)||(10428203-10428273)
chr4 (248-325)||(39655260-39655337)
chr4 (248-343)||(16845027-16845123)
chr4 (248-320)||(16922335-16922407)
chr4 (248-343)||(19498510-19498603)
chr4 (269-320)||(51964737-51964788)
chr4 (168-237)||(4167847-4167916)
chr4 (252-317)||(17679432-17679497)
chr4 (168-237)||(30507044-30507113)
chr4 (248-295)||(23508516-23508564)
chr4 (163-237)||(11906822-11906896)
chr4 (248-338)||(35465118-35465207)
[»] chr1 (37 HSPs)
chr1 (201-456)||(26803847-26804098)
chr1 (162-456)||(39134639-39134938)
chr1 (162-389)||(38546955-38547184)
chr1 (168-364)||(45758485-45758684)
chr1 (172-378)||(6221654-6221860)
chr1 (250-349)||(38853529-38853627)
chr1 (198-423)||(5533242-5533470)
chr1 (248-343)||(9173029-9173124)
chr1 (248-343)||(9181011-9181106)
chr1 (268-456)||(10925980-10926159)
chr1 (248-343)||(27559649-27559744)
chr1 (248-345)||(50881440-50881537)
chr1 (248-343)||(5316692-5316787)
chr1 (248-343)||(23185439-23185534)
chr1 (248-387)||(43235774-43235916)
chr1 (248-343)||(44655753-44655848)
chr1 (249-345)||(6771801-6771897)
chr1 (248-379)||(33170734-33170866)
chr1 (248-343)||(17168968-17169063)
chr1 (249-343)||(14146312-14146406)
chr1 (247-337)||(40501795-40501885)
chr1 (249-338)||(16140072-16140161)
chr1 (248-332)||(6889634-6889718)
chr1 (248-332)||(6891480-6891564)
chr1 (248-343)||(1366884-1366979)
chr1 (248-343)||(4971624-4971719)
chr1 (248-343)||(5027561-5027656)
chr1 (247-330)||(35392295-35392377)
chr1 (248-334)||(21740943-21741029)
chr1 (249-343)||(41697144-41697238)
chr1 (248-344)||(50146307-50146403)
chr1 (248-343)||(19955729-19955824)
chr1 (249-343)||(3406430-3406524)
chr1 (249-343)||(3440296-3440390)
chr1 (248-338)||(51607445-51607536)
chr1 (248-343)||(13913486-13913583)
chr1 (307-343)||(44895664-44895700)
[»] chr6 (23 HSPs)
chr6 (168-456)||(20611680-20611968)
chr6 (168-456)||(2477511-2477799)
chr6 (248-343)||(28075787-28075882)
chr6 (248-338)||(1155856-1155946)
chr6 (247-343)||(33774121-33774217)
chr6 (248-355)||(6159430-6159537)
chr6 (248-343)||(13727406-13727501)
chr6 (248-343)||(20711727-20711822)
chr6 (252-378)||(21183686-21183813)
chr6 (248-343)||(21479498-21479593)
chr6 (248-320)||(30121789-30121861)
chr6 (252-343)||(27788699-27788790)
chr6 (248-338)||(21280554-21280644)
chr6 (248-337)||(17353964-17354053)
chr6 (272-390)||(4036904-4037023)
chr6 (248-343)||(19737699-19737794)
chr6 (249-343)||(24711007-24711101)
chr6 (314-430)||(27131254-27131371)
chr6 (248-345)||(34397859-34397956)
chr6 (248-343)||(235231-235328)
chr6 (249-343)||(30832532-30832626)
chr6 (248-300)||(27314185-27314238)
chr6 (201-237)||(27131158-27131194)
[»] chr8 (34 HSPs)
chr8 (161-456)||(41677091-41677389)
chr8 (168-456)||(15167339-15167629)
chr8 (198-456)||(8646087-8646352)
chr8 (168-456)||(15078647-15078935)
chr8 (249-424)||(34789870-34790046)
chr8 (248-375)||(39332412-39332540)
chr8 (201-389)||(7944481-7944671)
chr8 (248-432)||(11290095-11290280)
chr8 (168-456)||(34048634-34048923)
chr8 (247-389)||(8102868-8103009)
chr8 (248-427)||(5973114-5973292)
chr8 (268-378)||(5942661-5942772)
chr8 (169-320)||(30674330-30674482)
chr8 (248-343)||(41879182-41879277)
chr8 (248-391)||(14509990-14510133)
chr8 (248-343)||(5860751-5860846)
chr8 (248-343)||(45475818-45475913)
chr8 (249-367)||(5721536-5721654)
chr8 (248-377)||(23941098-23941227)
chr8 (247-355)||(25561501-25561607)
chr8 (248-343)||(23606636-23606731)
chr8 (248-343)||(23798268-23798363)
chr8 (248-343)||(30883330-30883425)
chr8 (307-449)||(38009205-38009345)
chr8 (248-343)||(2952228-2952323)
chr8 (248-343)||(10917392-10917487)
chr8 (248-343)||(13534694-13534788)
chr8 (248-343)||(13624234-13624328)
chr8 (248-343)||(42600783-42600878)
chr8 (249-343)||(37430166-37430260)
chr8 (198-287)||(34868132-34868223)
chr8 (254-343)||(3048530-3048619)
chr8 (248-286)||(9108551-9108589)
chr8 (168-228)||(14509906-14509966)
[»] chr7 (37 HSPs)
chr7 (168-456)||(23858960-23859250)
chr7 (248-456)||(27237429-27237638)
chr7 (248-452)||(7398342-7398547)
chr7 (162-456)||(23020404-23020697)
chr7 (247-456)||(20153090-20153298)
chr7 (162-456)||(12419414-12419712)
chr7 (198-389)||(9021757-9021947)
chr7 (248-378)||(6765687-6765818)
chr7 (248-388)||(2611268-2611409)
chr7 (255-389)||(9014782-9014910)
chr7 (162-389)||(18201092-18201318)
chr7 (351-455)||(26917792-26917896)
chr7 (248-343)||(18776772-18776867)
chr7 (162-320)||(21763508-21763665)
chr7 (268-343)||(23551097-23551172)
chr7 (248-343)||(29077221-29077316)
chr7 (247-362)||(36891560-36891675)
chr7 (248-343)||(48983850-48983945)
chr7 (248-343)||(8171545-8171640)
chr7 (248-343)||(10329416-10329511)
chr7 (248-343)||(20091287-20091382)
chr7 (168-378)||(12981294-12981501)
chr7 (172-298)||(38971299-38971425)
chr7 (278-432)||(17800257-17800412)
chr7 (248-343)||(24525691-24525786)
chr7 (249-343)||(10955485-10955579)
chr7 (162-300)||(23744840-23744979)
chr7 (248-320)||(26254017-26254089)
chr7 (249-343)||(12596294-12596388)
chr7 (248-338)||(36902930-36903020)
chr7 (247-343)||(8239688-8239784)
chr7 (198-297)||(9014134-9014233)
chr7 (248-320)||(33162345-33162417)
chr7 (251-343)||(38414885-38414977)
chr7 (248-343)||(47984975-47985071)
chr7 (248-343)||(19692095-19692190)
chr7 (252-338)||(28749716-28749801)
[»] chr5 (45 HSPs)
chr5 (248-456)||(14318389-14318597)
chr5 (248-456)||(34425790-34425999)
chr5 (248-456)||(2024646-2024853)
chr5 (198-456)||(10543569-10543819)
chr5 (168-456)||(11242242-11242531)
chr5 (248-456)||(2411976-2412184)
chr5 (168-456)||(24395625-24395915)
chr5 (170-362)||(2530823-2531015)
chr5 (248-456)||(40794331-40794538)
chr5 (248-389)||(22648740-22648881)
chr5 (248-456)||(1366530-1366739)
chr5 (162-338)||(26718866-26719043)
chr5 (162-338)||(26988610-26988787)
chr5 (248-385)||(36868880-36869018)
chr5 (248-389)||(33037733-33037876)
chr5 (248-343)||(16198798-16198893)
chr5 (248-343)||(38869367-38869462)
chr5 (168-432)||(10407369-10407638)
chr5 (270-389)||(15639600-15639717)
chr5 (249-345)||(36187884-36187980)
chr5 (248-343)||(9364292-9364387)
chr5 (248-343)||(16592078-16592173)
chr5 (248-343)||(16799331-16799426)
chr5 (248-343)||(34756370-34756465)
chr5 (248-331)||(40389540-40389623)
chr5 (248-337)||(28822346-28822435)
chr5 (248-343)||(22986562-22986657)
chr5 (248-343)||(27079012-27079107)
chr5 (249-343)||(15480094-15480188)
chr5 (248-338)||(31194616-31194705)
chr5 (250-343)||(19523200-19523293)
chr5 (248-320)||(7338023-7338095)
chr5 (254-338)||(27924088-27924172)
chr5 (248-343)||(23284066-23284161)
chr5 (248-343)||(30854330-30854425)
chr5 (249-343)||(2274891-2274985)
chr5 (268-378)||(41911641-41911752)
chr5 (248-338)||(31881438-31881527)
chr5 (248-338)||(7670930-7671021)
chr5 (248-289)||(606209-606250)
chr5 (248-383)||(17344918-17345052)
chr5 (162-228)||(35080689-35080755)
chr5 (204-237)||(2024600-2024633)
chr5 (396-456)||(26719049-26719109)
chr5 (396-456)||(26988793-26988853)
[»] scaffold0018 (1 HSPs)
scaffold0018 (248-456)||(173517-173726)
[»] scaffold1320 (1 HSPs)
scaffold1320 (168-456)||(1243-1531)
[»] scaffold0007 (1 HSPs)
scaffold0007 (248-456)||(230866-231075)
[»] scaffold0182 (1 HSPs)
scaffold0182 (252-378)||(24004-24130)
[»] scaffold1590 (1 HSPs)
scaffold1590 (248-364)||(265-381)
[»] scaffold0012 (1 HSPs)
scaffold0012 (248-389)||(206496-206633)
[»] scaffold0097 (1 HSPs)
scaffold0097 (168-355)||(38914-39105)
[»] scaffold0227 (2 HSPs)
scaffold0227 (276-432)||(15939-16095)
scaffold0227 (248-286)||(16123-16161)
[»] scaffold0039 (1 HSPs)
scaffold0039 (248-343)||(106539-106634)
[»] scaffold0022 (2 HSPs)
scaffold0022 (176-427)||(39999-40257)
scaffold0022 (176-427)||(138059-138317)
[»] scaffold0070 (1 HSPs)
scaffold0070 (250-343)||(1344-1437)
[»] scaffold0003 (2 HSPs)
scaffold0003 (268-386)||(351361-351479)
scaffold0003 (305-386)||(350272-350353)
[»] scaffold0001 (1 HSPs)
scaffold0001 (249-298)||(183106-183155)


Alignment Details
Target: chr3 (Bit Score: 298; Significance: 1e-167; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 22 - 489
Target Start/End: Original strand, 28689141 - 28689609
Alignment:
Q  22 taattttacaaagttactcttataaaaaaggaggttcctgagaatcgagatcgaagttgaaccatttaggtgaattagattcagcttaaggcactttgtt 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28689141 taattttacaaagttactcttataaaaaaggaggttcctgagaatcgagattgaagttgaaccatttaggtgaattagattcagcttaaggcactttgtt 28689240  T
Q  122 gtaatactttatgtatcacagcctcacttttttaatataaagggctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaa 221  Q
    ||||||||||||||||||||| || || ||| ||||||| | || |||||| || ||| ||||||||| ||| | |||||||||||||   |||||||||    
T  28689241 gtaatactttatgtatcacagtctgacctttctaatatacatggatgttcccacaaatttggaggttcggctctccaagtgaaaagaggctcgtaataaa 28689340  T
Q  222 ataaaaacgtatttttnnnnnnnnnt-aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaat 320  Q
    |||||||  |||||||           |||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28689341 ataaaaagatattttttttaaaaaaagaatgttctatttaaattttcaaaaagataaatacaaggtgccgtatatatgcgatatatccaaaggtgaaaat 28689440  T
Q  321 tattaccgtatacatgagaaacctcaaactaccctctcaaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagac 420  Q
     | | |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||     |||||||||| ||||||||||||||    
T  28689441 cactgccgtatacatgagaaatctcaaactaccctcccaaaaaacacccacctaacaccaaaagcaagatgatccaattctaataggcttaaaacaagac 28689540  T
Q  421 aacagaagaggagaaagaaatcaaatcggggaagaacaaacactttcaattaatatattaataacattt 489  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28689541 aacagaagaggagaaagaaatcaaatcggggaagaacaaacactttcaattaatatattaataacattt 28689609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 168 - 452
Target Start/End: Complemental strand, 26279721 - 26279434
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaaatttcc 267  Q
    ||||||| |||| |||||||||| ||||| |||||||||||| ||| || ||||||||||||||||||||          ||||||||||||||||||      
T  26279721 gttcctatgaatttggaggttcaactttgtaagtgaaaagaggtccatagtaaaataaaaacgtatttttttaaaagaacaatgttctatttaaattttt 26279622  T
Q  268 taaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattatt--accgtatacatgagaaacctcaaactaccctctc-aaaaaa 364  Q
    ||||||||||||| |||||||||||||||||| ||| | |||||| ||||||| | |  ||  |||||||||| |||||||||| |||||| | ||||||    
T  26279621 taaaagataaatagaaggtgtcgtatatatgcaatacacccaaagatgaaaatcactacacattatacatgaggaacctcaaaccaccctcccaaaaaaa 26279522  T
Q  365 cacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcgggga 452  Q
    ||||||||||||||||||||||| ||     |||| ||||| || ||||||||||||| ||||||||| || ||||||||||||||||    
T  26279521 cacccacctaacaccaaaagcaacatgacccaattttaataggcctaaaacaagacaatagaagaggaaaatgaaatcaaatcgggga 26279434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 177 - 432
Target Start/End: Complemental strand, 52374828 - 52374572
Alignment:
Q  177 aatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnnta--atgttctatttaaatttcctaaaaga 274  Q
    |||||||| | ||| ||||| ||||||||||| ||||||||||||||||||||||||||||          |  |||||||||||||||||  |   | |    
T  52374828 aatctggatgctcaactttgtaagtgaaaagaaatccgtaataaaataaaaacgtatttttttttaaaagaacaatgttctatttaaatttttttttaaa 52374729  T
Q  275 taaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaacacccaccta 374  Q
    ||||||||| |||||||||| |||||||| ||| ||||| |||||| | ||||||||||||||  ||||||| || | |||| |||||||||||||||||    
T  52374728 taaatacaatgtgtcgtatagatgcgatacatctaaaggagaaaatcactaccgtatacatgaagaacctcatacca-cctcccaaaaaacacccaccta 52374630  T
Q  375 acaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagagga 432  Q
    |||||||||||||||      |||||||||| || |||||||||||||||||| ||||    
T  52374629 acaccaaaagcaagaggactcaattctaataggcctaaaacaagacaacagaaaagga 52374572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 247 - 432
Target Start/End: Complemental strand, 8420426 - 8420240
Alignment:
Q  247 taatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctca 346  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||||||||   || | ||||| |||||||| | | ||||||| | ||| |||||||    
T  8420426 taatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacacccaaatgtgaaaatcactgccgtatatacgaggaacctca 8420327  T
Q  347 aactacc-ctctcaaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagagga 432  Q
    ||| |||  ||  ||||||||||||||||||||||||||||||| |    ||||||||||||| ||||| |||||||||||| ||||    
T  8420326 aaccaccattccaaaaaaacacccacctaacaccaaaagcaagagaacccaattctaatatgcctaaaataagacaacagaaaagga 8420240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 248 - 456
Target Start/End: Complemental strand, 42453503 - 42453302
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||| ||||||||||  |||||||||||||||||||||| ||||||||||||| | | ||||||||       || |||||||||||| ||||||||    
T  42453503 aatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacctcaa 42453411  T
Q  348 actaccctctcaaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatc 447  Q
    || |||||   ||||| || | | ||||||||||||| ||||      |||||||||| || |||||||||||||||||||| || || |||||||||||    
T  42453410 accaccctaaaaaaaaccatctatctaacaccaaaagtaagaggactcaattctaataggcctaaaacaagacaacagaagaagaaaaggaaatcaaatc 42453311  T
Q  448 ggggaagaa 456  Q
    |||||||||    
T  42453310 ggggaagaa 42453302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 168 - 432
Target Start/End: Complemental strand, 49393268 - 49393005
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnnt-aatgttctatttaaatttc 266  Q
    ||||||||||||| ||||| || |||| | ||||||||| |||  |||||||||||||||| ||||||||           |||||||| |||||||||     
T  49393268 gttcctacgaatccggaggctcggctt-gtaagtgaaaaaagactcgtaataaaataaaaatgtatttttttttaaagaacaatgttctctttaaatttt 49393170  T
Q  267 ctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctc-aaaaaac 365  Q
     |||||||||||||||||| |||||||||||| | || | |||||||| ||||||| ||||||||||||||| |||||||||  ||| || | ||||||     
T  49393169 ttaaaagataaatacaaggcgtcgtatatatgtg-tacacccaaaggtaaaaattactaccgtatacatgag-aacctcaaatcaccatcccaaaaaaat 49393072  T
Q  366 acccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagagga 432  Q
    || |||||||||||||||| ||||     ||||||||||| || |||||||||||||| ||| ||||    
T  49393071 actcacctaacaccaaaagtaagaggacctaattctaataggcctaaaacaagacaacggaaaagga 49393005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 248 - 424
Target Start/End: Original strand, 54574834 - 54575011
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||||||||||||||   |||| |||||||||||||  |||||||||||| || | ||||| || ||||| | |||| |||||||||| ||||||||    
T  54574834 aatgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgaggaacctcaa 54574933  T
Q  348 actaccctctc-aaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaaca 424  Q
    ||  ||||| | ||||||||||||||||||| |||||| |||||     ||||||||||||| |||||||| ||||||    
T  54574934 accgccctcccaaaaaaacacccacctaacaacaaaagtaagatgactcaattctaatatgcctaaaacaaaacaaca 54575011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 247 - 378
Target Start/End: Original strand, 32319161 - 32319292
Alignment:
Q  247 taatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctca 346  Q
    |||||||||||||||||||  |||||||||||||||| |||| ||||||||||| || | |||||||||||||||| || | |||| | ||| |||||||    
T  32319161 taatgttctatttaaattttttaaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtgaaaattactatcttatatacgaggaacctca 32319260  T
Q  347 aactaccctctcaaaaaacacccacctaacac 378  Q
    |||||| |||  |||| | |||||||||||||    
T  32319261 aactactctccaaaaacatacccacctaacac 32319292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 247 - 343
Target Start/End: Original strand, 8073344 - 8073440
Alignment:
Q  247 taatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||||||||| || | ||||| |||||||| | ||||||||||||||| ||||    
T  8073344 taatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacc 8073440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 27078576 - 27078671
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||| ||| |||||||||||| |||| ||| |||||||||| | ||||||||||||||||||||    
T  27078576 aatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacc 27078671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 27084373 - 27084468
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||| ||| |||||||||||| |||| ||| |||||||||| | ||||||||||||||||||||    
T  27084373 aatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacc 27084468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 424
Target Start/End: Complemental strand, 29598179 - 29598030
Alignment:
Q  274 ataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaacacccacct 373  Q
    |||||||||||||  |||||||||| |||| |  ||||| ||||| | | ||||||||||||||| || ||||||| | ||||  |||||||| ||||||    
T  29598179 ataaatacaaggttccgtatatatgtgatacactcaaagatgaaa-tcactaccgtatacatgaggaatctcaaaccagcctccaaaaaaacatccacct 29598081  T
Q  374 aacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaaca 424  Q
    |||||||||||||||||    ||||||||||| || |||||||||||||||    
T  29598080 aacaccaaaagcaagatgacctaattctaataggcctaaaacaagacaaca 29598030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 47467782 - 47467688
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| ||||  |||||||||||||||||||| ||||||||||||||| | ||| |||||||||| | ||||||||||||||| ||||    
T  47467782 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgaggaacc 47467688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 53506891 - 53506986
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||  |||||||||||| || | |||||||||||||| | ||||||||||||||||||||    
T  53506891 aatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 53506986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 335
Target Start/End: Original strand, 54407165 - 54407252
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacat 335  Q
    ||||||||||||| ||||  ||||||||||||| |||||| |||||||||||| || |||||||||||||||| | ||||||||||||    
T  54407165 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat 54407252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 54619210 - 54619305
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||||||||| | ||||||||||||||| ||||    
T  54619210 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 54619305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 248 - 338
Target Start/End: Complemental strand, 37168466 - 37168376
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgag 338  Q
    ||||||||||||| ||||  ||||||||||||| |||||| |||||||||| | |||| |||||||||||||| | |||||||||||||||    
T  37168466 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgag 37168376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 248 - 338
Target Start/End: Original strand, 38681100 - 38681190
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgag 338  Q
    ||||||||||||| ||||  |||||||||||||||||||| ||||| |||||| || ||||| |||||||||| | |||||||||||||||    
T  38681100 aatgttctatttatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgag 38681190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 42098899 - 42098805
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| ||||  |||||||||||||||||||| |||||||||||| ||||  || |||||||||| | ||||||||||||||| ||||    
T  42098899 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgaggaacc 42098805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 3953903 - 3953998
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||||||||| |  |||||||||||||| ||||    
T  3953903 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgaggaacc 3953998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 21582870 - 21582775
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||| |||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||||||||| | ||||||||||||||| ||||    
T  21582870 aatgttttatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 21582775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 378
Target Start/End: Complemental strand, 25855520 - 25855390
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||   |  | |||||| ||||||| | ||||||||||| ||  ||||||||    
T  25855520 aatgttctatttaaattttttaaaagataa-tacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtatacacgaagaacctcaa 25855422  T
Q  348 actaccctctc-aaaaaacacccacctaacac 378  Q
    || |||||| | ||||||||| ||||||||||    
T  25855421 accaccctcccaaaaaaacactcacctaacac 25855390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 34290643 - 34290738
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||| |||||||||||| || | |||||||||||||| | ||||||||| ||||| ||||    
T  34290643 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacc 34290738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 43207245 - 43207339
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||| |||||||||||| || || ||||||||||||| | ||||||||||||||| ||||    
T  43207245 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacat-caaaggtgaaaatgactaccgtatacatgaggaacc 43207339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 44708576 - 44708481
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||| ||||||||| || || | |||||||||||||| | ||||||||||||||| ||||    
T  44708576 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 44708481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 276 - 343
Target Start/End: Original strand, 29620423 - 29620490
Alignment:
Q  276 aaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| |||||||||||| |||||||| |||||||||| | ||||||||||||||| ||||    
T  29620423 aaatacaaggtgccgtatatatgcggtatatccagaggtgaaaatgactaccgtatacatgaggaacc 29620490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 18372582 - 18372530
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcg 300  Q
    ||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  18372582 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcg 18372530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 36716032 - 36716103
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaa 319  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||||||||    
T  36716032 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaa 36716103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 249 - 343
Target Start/End: Original strand, 53149322 - 53149416
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| ||||  |||||||||||||||||||| |||||||||||| || |  || || | ||||| | ||||||||||||||| ||||    
T  53149322 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatgaggaacc 53149416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 23641243 - 23641312
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtattttt 237  Q
    ||||||||||||||||||| || | | || | ||||||||||| |||| |||||||||||||||||||||    
T  23641243 gttcctacgaatctggaggctcggttctgtaggtgaaaagagacccgtgataaaataaaaacgtattttt 23641312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 252 - 335
Target Start/End: Original strand, 9878698 - 9878781
Alignment:
Q  252 ttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacat 335  Q
    ||||||||| ||||  ||||||||||||| ||||||  ||||||||||| || | |||||||||||||| | || |||||||||    
T  9878698 ttctatttatattttttaaaagataaatataaggtgcagtatatatgcggtacacccaaaggtgaaaatgactatcgtatacat 9878781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 248 - 338
Target Start/End: Complemental strand, 36606064 - 36605974
Alignment:
Q  248 aatgttctatttaaatttcctaaaa-gataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgag 338  Q
    ||||||||||||| ||||  ||||| ||||||||||||||| |||||||||||| || | ||| || |||||| || |||||||||||||||    
T  36606064 aatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaa-tactaccgtatacatgag 36605974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 50258631 - 50258682
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcg 300  Q
    |||||||||||| ||||  ||||| |||||||||||||||||||||||||||    
T  50258631 atgttctatttatattttttaaaaaataaatacaaggtgtcgtatatatgcg 50258682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 50939240 - 50939335
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||| |||||||| ||||  ||||||||||||| |||||| |||||||||  | || | |||||||| ||||| | ||||||||||||||| ||||    
T  50939240 aatgatctatttatattttttaaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgaggaacc 50939335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 389
Target Start/End: Complemental strand, 790031 - 789893
Alignment:
Q  252 ttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaacta 351  Q
    ||||||||||||||  ||||  |||||||||||||||| ||||||||   || | |||||||| ||||| |  ||| |||||||||| |||||||||| |    
T  790031 ttctatttaaattttttaaacaataaatacaaggtgtcatatatatgttgtacacccaaaggtaaaaatcaccaccatatacatgaggaacctcaaacca 789932  T
Q  352 ccctctc-aaaaaacacccacctaacaccaaaagcaaga 389  Q
    ||  | | ||||||||| || ||||||| ||||| ||||    
T  789931 ccaacccaaaaaaacactcatctaacacaaaaagtaaga 789893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 473 - 518
Target Start/End: Original strand, 28689746 - 28689791
Alignment:
Q  473 atatattaataacatttaattcaacattagtactactaggctataa 518  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||    
T  28689746 atatattaataacatttaattcaatattggtactactgggctataa 28689791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 23641329 - 23641377
Alignment:
Q  252 ttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcg 300  Q
    ||||||||| ||||  |||||||||||||||| ||||||||||||||||    
T  23641329 ttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcg 23641377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 36179604 - 36179649
Alignment:
Q  345 caaactaccctctcaaa-aaacacccacctaacaccaaaagcaaga 389  Q
    ||||| ||||||||||| |||||||||||| |||||||||||||||    
T  36179604 caaaccaccctctcaaagaaacacccacctgacaccaaaagcaaga 36179649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 1e-61; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 162 - 456
Target Start/End: Original strand, 21665621 - 21665916
Alignment:
Q  162 agggctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaa 261  Q
    |||| |||||||||||||||||||| || ||| || ||||||||||||| ||||||||||||||||| ||||||||          ||||||||||||||    
T  21665621 agggttgttcctacgaatctggagggtcggctctgtaagtgaaaagagacccgtaataaaataaaaatgtatttttttaaaagaacaatgttctatttaa 21665720  T
Q  262 atttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccct-ctcaa 360  Q
    ||||  ||||||||||||||| ||||||||||||||| |||| ||| ||| |||||||| | ||||||||||||||| |||| ||||| ||||| || ||    
T  21665721 attttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgaggaaccacaaaccaccctcctaaa 21665820  T
Q  361 aaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    ||||||||||||||||||| |||||||||      ||||||||||  | ||||||||||||||||| ||||| || |||||||||| |||||||||    
T  21665821 aaaacacccacctaacacctaaagcaagaggacccaattctaatagacataaaacaagacaacagatgaggaaaaggaaatcaaattggggaagaa 21665916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 168 - 456
Target Start/End: Complemental strand, 38400974 - 38400684
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtat-ttttnnnnnnnnntaatgttctatttaaatttc 266  Q
    |||| |||||||| | | |||| ||| || ||||||||||||| ||| |||||||||||||| ||| ||||          ||||||||||||||||||     
T  38400974 gttcttacgaatccgaaagttcggctctgtaagtgaaaagagacccgcaataaaataaaaacatatattttttataagaacaatgttctatttaaatttt 38400875  T
Q  267 ctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctc-tcaaaaaac 365  Q
     |||||||||||||||||||||| ||||||||||||| || ||||||||||||| | ||||||||||||||| |||||||||| |||||| | |||||||    
T  38400874 ttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccctcttaaaaaaac 38400775  T
Q  366 acccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    |||||||||||||||||||||||||      ||||||||| || |||||||||||||||||| |||| ||  ||||||||| |||||||||    
T  38400774 acccacctaacaccaaaagcaagatgaccctattctaataggcctaaaacaagacaacagaacaggaaaagaaaatcaaattggggaagaa 38400684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 193 - 456
Target Start/End: Original strand, 24035496 - 24035761
Alignment:
Q  193 tttgcaagtgaaaagagatccgtaataaaataaaaacgtattt-ttnnnnnnnnntaatgttctatttaaatttcctaaaagataaatacaaggtgtcgt 291  Q
    |||| |||||||||||   |||||||||||||||||||||||| ||          ||||||||||||||||||  |||||||||||||||||||| |||    
T  24035496 tttgtaagtgaaaagatgcccgtaataaaataaaaacgtatttcttttaaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgt 24035595  T
Q  292 atatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctc-aaaaaacacccacctaacaccaaaagcaagat 390  Q
    ||| |||||||| | | |||||||||||| | ||||| ||||||||| || | ||||| |||||| | |||||||||||||||||||| ||||||||||     
T  24035596 ataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgaggaatcgcaaaccaccctcccaaaaaaacacccacctaacactaaaagcaagag 24035695  T
Q  391 agggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
        |||||||||||  | ||||||||||||||||||||||| || ||||||||||| ||||||||    
T  24035696 gacctaattctaatagacctaaaacaagacaacagaagaggaaaaggaaatcaaatcagggaagaa 24035761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 274 - 456
Target Start/End: Complemental strand, 37182739 - 37182556
Alignment:
Q  274 ataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctc-aaaaaacacccacc 372  Q
    |||||||||||||||||||||||||| ||| | ||||| |||||||| | ||||||||||||||| |||||||||  |||||| | ||||||||||||||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgaggaacctcaaatcaccctcccaaaaaaacacccacc 37182640  T
Q  373 taacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    ||||| ||||||||||||     |||||||||| || ||||||||||||| ||||||||| || ||||||||||||||||||||    
T  37182639 taacagcaaaagcaagatgacccaattctaataggcctaaaacaagacaatagaagaggaaaaggaaatcaaatcggggaagaa 37182556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 252 - 456
Target Start/End: Original strand, 16227379 - 16227584
Alignment:
Q  252 ttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaacta 351  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||| |||| | | | || ||||||| | |||  ||||||| || |||||||||| |    
T  16227379 ttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactactatatacataaggaacctcaaacca 16227478  T
Q  352 ccctctcaaaaaa-cacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggg 450  Q
    ||||| ||||||| |||||||||||||||||||| |||||     ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||    
T  16227479 ccctcccaaaaaaccacccacctaacaccaaaagtaagatgactcaattctaatagacataaaacaagacaacaaaagaggaaaaagaaatcaaatcggg 16227578  T
Q  451 gaagaa 456  Q
    ||||||    
T  16227579 gaagaa 16227584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 198 - 432
Target Start/End: Original strand, 11912712 - 11912950
Alignment:
Q  198 aagtgaaaagagatccgtaataaaataaaaacgtat--ttttnnnnnnnnntaatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatat 295  Q
    ||||||||||| |||||||||||||||||||| |||  ||||          ||||||||||||||||||   |||| |||||||||| ||| |||||||    
T  11912712 aagtgaaaagatatccgtaataaaataaaaacatatattttttttaaagaacaatgttctatttaaatttaaaaaaaaataaatacaaagtgccgtatat 11912811  T
Q  296 atgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctc--aaaaaacacccacctaacaccaaaagcaagatagg 393  Q
    |||| ||| |||||||| ||||||| | |||||||||||| || |||||||||| |||||| |  ||||||||| ||||||||||||||| ||||||       
T  11912812 atgcaatacatccaaagatgaaaatcactaccgtatacataaggaacctcaaaccaccctcccaaaaaaaacactcacctaacaccaaaatcaagatgac 11912911  T
Q  394 gtaattctaatatgcttaaaacaagacaacagaagagga 432  Q
      |||||||||| || ||||||||||||||| |||||||    
T  11912912 ccaattctaataggcctaaaacaagacaacaaaagagga 11912950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 268 - 455
Target Start/End: Original strand, 12134067 - 12134254
Alignment:
Q  268 taaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctca-aaaaaca 366  Q
    |||||||||||||||||||  ||||||||||||||| | ||||| |||||||| | |||||||||||| || |||||||||| |||||| || |||||||    
T  12134067 taaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacattaggaacctcaaaccaccctcccacaaaaaca 12134166  T
Q  367 cccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaaga 455  Q
      ||||||||||||||||||||| |    |||||||||| || ||||||||||||| ||||||||| || ||||||| ||| |||||||    
T  12134167 tacacctaacaccaaaagcaagagaactcaattctaataggcctaaaacaagacaa-agaagaggaaaaggaaatcatatcagggaaga 12134254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 248 - 456
Target Start/End: Original strand, 13800551 - 13800760
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatcc-aaaggtgaaaattattaccgtatacatgagaaacctca 346  Q
    ||||||||||||||||||  ||||||||||||| |||||| ||||||||||||||| | || |||||||||||| | |||  |||||| ||| |||||||    
T  13800551 aatgttctatttaaattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaaggtgaaaatcactactatatacacgaggaacctca 13800650  T
Q  347 aactaccctctc-aaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaa 445  Q
    ||  ||| || | ||||||||| |||||||||||||||||||||      |||||||||| || | ||||||||||||||||||||| || |||||||||    
T  13800651 aatcaccttcccaaaaaaacacacacctaacaccaaaagcaagaagatccaattctaataggcct-aaacaagacaacagaagaggaaaatgaaatcaaa 13800749  T
Q  446 tcggggaagaa 456  Q
    |||| ||||||    
T  13800750 tcggagaagaa 13800760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 329 - 456
Target Start/End: Complemental strand, 29694398 - 29694270
Alignment:
Q  329 tatacatgagaaacctcaaactaccctctcaaaaaa-cacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaa 427  Q
    ||||||||||||||||||||| ||  || ||||||| |||||||||||||||||||||||||      |||||||||| |  ||||||||||||||||||    
T  29694398 tatacatgagaaacctcaaaccactatcccaaaaaaacacccacctaacaccaaaagcaagaggacccaattctaataggtctaaaacaagacaacagaa 29694299  T
Q  428 gaggagaaagaaatcaaatcggggaagaa 456  Q
    ||||| |||||||||||||||||||||||    
T  29694298 gaggaaaaagaaatcaaatcggggaagaa 29694270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 168 - 376
Target Start/End: Complemental strand, 16097184 - 16096973
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttt-tnnnnnnnnntaatgttctatttaaatttc 266  Q
    |||||||||||| |||||| || ||| || |||||||||| |  ||||||||||||||| | ||||||| |          ||||||||||||||||||     
T  16097184 gttcctacgaatttggaggctcggctctgtaagtgaaaagtggcccgtaataaaataaatatgtattttgtttaaaagaacaatgttctatttaaatttt 16097085  T
Q  267 ctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccct--ctcaaaaaa 364  Q
     |||||||||||||||||||| ||||||||||   || | |||||||||||||||| |||| |||||||||| |||||||||| ||| |  |  ||||||    
T  16097084 ttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgaggaacctcaaaccaccattccaaaaaaaa 16096985  T
Q  365 cacccacctaac 376  Q
    ||||||||||||    
T  16096984 cacccacctaac 16096973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 29939869 - 29939964
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  || |||||||||||||||||||||||||||||| || | |||||||||||||| | ||||||||||||||| ||||    
T  29939869 aatgttctatttatattttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 29939964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 279 - 456
Target Start/End: Original strand, 11952644 - 11952822
Alignment:
Q  279 tacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaa-cacccacctaaca 377  Q
    ||||| |||||||||||||| |||| |  || || ||||||| | ||| | ||||||||| |||||||||| |||||| ||||||| ||| |||||||||    
T  11952644 tacaaagtgtcgtatatatgtgatacactcatagatgaaaatcactactgcatacatgaggaacctcaaaccaccctcccaaaaaaacactcacctaaca 11952743  T
Q  378 ccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    || ||| |||||      |||||||||| || |||||||||||||  |||||||| || ||||||||||||||||||||    
T  11952744 cctaaaacaagaggactcaattctaataggcctaaaacaagacaatggaagaggaaaaggaaatcaaatcggggaagaa 11952822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 378
Target Start/End: Original strand, 28425717 - 28425847
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    |||||||||||||||  |  ||||||||||||||||||||||||||||||||  || | ||||| |||||||| | |||| |||| ||||| ||||||||    
T  28425717 aatgttctatttaaaaattttaaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgaggaacctcaa 28425816  T
Q  348 actaccctctcaaaaaacacccacctaacac 378  Q
     |  ||||| |||||||||| ||||||||||    
T  28425817 gcctccctcccaaaaaacactcacctaacac 28425847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 24410532 - 24410437
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||| |||||||||||| || | |||||||||||||| | ||||||||||||||| ||||    
T  24410532 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 24410437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 247 - 343
Target Start/End: Original strand, 8907085 - 8907181
Alignment:
Q  247 taatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||||| ||||  |||||||||||||||||| | |||||||||||| || | ||| |||| ||||| | ||||||||||||||||||||    
T  8907085 taatgttctatttatattttttaaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaaacc 8907181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 3155312 - 3155217
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | | | |||||||||| | ||||||||||||||| ||||    
T  3155312 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacc 3155217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 4505989 - 4505894
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||| ||||| | ||||||||||||||| ||||    
T  4505989 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacc 4505894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 6965102 - 6965007
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||| ||| |||||||||||| || | ||| |||||||||| | ||||||||||||||| ||||    
T  6965102 aatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 6965007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 362
Target Start/End: Original strand, 7742140 - 7742255
Alignment:
Q  248 aatgttctatttaaatttcct-aaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctca 346  Q
    ||||||||||||| ||||  | ||||||||||||||| ||||| |||||||||| || ||||||||||||||| || || ||||| |||||| |||||||    
T  7742140 aatgttctatttatatttttttaaaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcatgaggaacctca 7742239  T
Q  347 aactaccctctcaaaa 362  Q
    ||| || ||| |||||    
T  7742240 aaccactctcccaaaa 7742255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 12337455 - 12337550
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||||| |||||||| | || | ||| |||||||||| | ||||||||||||||| ||||    
T  12337455 aatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 12337550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 3953100 - 3953006
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| ||||  |||||||||||||||||||| |||||| ||||| || | ||| |||||||||| |||||||||| |||||| ||||    
T  3953100 atgttctatttatattttttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgaggaacc 3953006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 7162878 - 7162784
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| ||||  |||||||||||||||||||| |||||||||||| ||||  || |||||||||| | ||||||||| ||||| ||||    
T  7162878 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgaggaacc 7162784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 9046125 - 9046029
Alignment:
Q  248 aatgttctatttaaatttcct-aaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  | |||||||||||| |||||| |||||||||||| || | |||||||||||||| | ||||||||||||||| ||||    
T  9046125 aatgttctatttatatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 9046029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 425
Target Start/End: Complemental strand, 10252511 - 10252324
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgt---atatatgcgatatatccaaaggtgaaaat---tat--taccgtatacatgaga 339  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||   |||||| | | | | |||||||||||||    |||  || | ||||||||||     
T  10252511 aatgttcaatttaaattttttaaaagataaatacaaggtgtcgtcgtatatatactacacacccaaaggtgaaaaccactatcatatcatatacatgagg 10252412  T
Q  340 aacctcaaactaccctctcaaaaaa-cacccacctaa-caccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacag 425  Q
    |||||||||| ||||||  |||||| ||||||||||| |||||||||||||||     |||||||||| || ||||||||||||||||    
T  10252411 aacctcaaaccaccctccaaaaaaaacacccacctaaacaccaaaagcaagatgacccaattctaataggcctaaaacaagacaacag 10252324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 10762572 - 10762667
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| ||||||  ||||||||| | || | |||||||||||||| | ||||||||||||||| ||||    
T  10762572 aatgttctatttatattttttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 10762667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 37182820 - 37182751
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtattttt 237  Q
    ||||||| ||||| ||||| || ||| || ||||||||||||| ||||||||||||||||||||||||||    
T  37182820 gttcctaagaatccggaggctcggctctgtaagtgaaaagagacccgtaataaaataaaaacgtattttt 37182751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 317
Target Start/End: Complemental strand, 40636233 - 40636164
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaa 317  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||||||||||| || | ||| |||||||    
T  40636233 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtgaa 40636164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 26716224 - 26716128
Alignment:
Q  248 aatgttctatttaaatttcct-aaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  | |||||||||||| |||||| | |||||||||| || | |||||||||||||| | ||||||||||||||| ||||    
T  26716224 aatgttctatttatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 26716128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 389
Target Start/End: Original strand, 37622423 - 37622490
Alignment:
Q  324 taccgtatacatgagaaacctcaaactaccctctc--aaaaaacacccacctaacaccaaaagcaaga 389  Q
    ||||||||||| ||| |||||||||| ||||||||  ||||||||||||| |||||||||||| ||||    
T  37622423 taccgtatacacgaggaacctcaaaccaccctctcataaaaaacacccacttaacaccaaaagtaaga 37622490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 12694858 - 12694795
Alignment:
Q  165 gctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaa 228  Q
    ||||||| |||||||| ||||| || ||| || ||||||||||||| |||||||||||||||||    
T  12694858 gctgttcttacgaatccggaggctcggctctgtaagtgaaaagagacccgtaataaaataaaaa 12694795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 338
Target Start/End: Original strand, 27506747 - 27506837
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgag 338  Q
    |||| |||||||| ||||  ||||||||||||| |||||| |||||||||| | || | |||||||| ||||| | ||| |||||||||||    
T  27506747 aatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgag 27506837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 34694070 - 34694020
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatg 298  Q
    ||||||||||||| ||||  |||||||||||||||||||| ||||||||||    
T  34694070 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg 34694020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 34716482 - 34716432
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatg 298  Q
    ||||||||||||| ||||  |||||||||||||||||||| ||||||||||    
T  34716482 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg 34716432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 11952515 - 11952576
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaac 229  Q
    ||||||||||||||| ||| || | | || ||||||||||||| ||||||||||||||||||    
T  11952515 gttcctacgaatctgaaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaac 11952576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 42029325 - 42029256
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtattttt 237  Q
    ||||||| ||||||||||| || | |||| |||||||||||| | |||||||| ||||||| ||||||||    
T  42029325 gttcctaagaatctggaggctcggttttgtaagtgaaaagaggttcgtaataatataaaaatgtattttt 42029256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 22727530 - 22727610
Alignment:
Q  269 aaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaac 349  Q
    ||||||||||||| | ||| |||||||||||| || | ||||| |||||||| | |||| ||||||||| || ||||||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaagtgaaaatcactaccatatacatgataaccctcaaac 22727610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 7742054 - 7742116
Alignment:
Q  167 tgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaac 229  Q
    |||||||||||||| |||||||| | | || ||||||||||||  |||| |||||||||||||    
T  7742054 tgttcctacgaatccggaggttcggttctgtaagtgaaaagaggcccgtgataaaataaaaac 7742116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 42029240 - 42029194
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtata 294  Q
    ||||||||||||||||||  ||||||||||||| |||||||| ||||    
T  42029240 aatgttctatttaaattttttaaaagataaatataaggtgtcatata 42029194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 5952742 - 5952791
Alignment:
Q  268 taaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaa 317  Q
    |||||||||||||||||||| |||||||||||| || | ||| |||||||    
T  5952742 taaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 5952791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 44914850 - 44914899
Alignment:
Q  188 tcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtattttt 237  Q
    |||||| || |||||||||||| |||||||||||||||||| ||| ||||    
T  44914850 tcagctctgtaagtgaaaagaggtccgtaataaaataaaaatgtactttt 44914899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 9e-59; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 162 - 456
Target Start/End: Original strand, 36118378 - 36118672
Alignment:
Q  162 agggctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaa 261  Q
    ||||| ||||||||||||  ||| | || |||||| ||||||||||||   |||||||||||||||||||||||||          ||||||||||||||    
T  36118378 agggccgttcctacgaattcggaagctcggctttgtaagtgaaaagaggctcgtaataaaataaaaacgtatttttttaaatgaacaatgttctatttaa 36118477  T
Q  262 atttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaa 361  Q
    ||||  ||||||||||||||||||||||||||||||| |||| | |||||  ||||||| | ||||||||||||||| |||||| ||| |||||   |||    
T  36118478 attttttaaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgagtaacctctaaccacccttcaaaa 36118577  T
Q  362 aaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    ||||| |||||||||||||||||||||||     |||||||||| || ||||| ||||||| ||||||||| || ||||||||||||||||||||    
T  36118578 aaacatccacctaacaccaaaagcaagatgacccaattctaataggcctaaaagaagacaatagaagaggaaaaggaaatcaaatcggggaagaa 36118672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 161 - 456
Target Start/End: Complemental strand, 52468474 - 52468178
Alignment:
Q  161 aagggctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctattta 260  Q
    |||| ||||| ||||||||  ||||| || ||| || | |||||||||| || ||||||||||||||||||||||||          |||||||||||||    
T  52468474 aaggactgttactacgaattcggaggctcggctctgtaggtgaaaagaggtctgtaataaaataaaaacgtatttttttaaaagaacaatgttctattta 52468375  T
Q  261 aatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaa 360  Q
    |||||  |||||||||||||||||||| ||||||||||  ||| |||||||||||||||| | |||||||| |||||| |||||||||| ||| || |||    
T  52468374 aattttttaaaagataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgaggaacctcaaaccaccttcccaa 52468275  T
Q  361 aaa-acacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    ||| ||||||||||||| |||||| |||||      |||||||||| || ||||||||||||||| ||||||| || ||||| ||||||||||||||    
T  52468274 aaagacacccacctaacgccaaaaacaagaggactcaattctaataggcctaaaacaagacaacataagaggaaaaggaaatgaaatcggggaagaa 52468178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 254 - 456
Target Start/End: Complemental strand, 40217327 - 40217122
Alignment:
Q  254 ctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactacc 353  Q
    ||||||||||||  ||||||||||||| |||||||||||||||||||||| |||||||| ||||||| |||| | |||||||||| |||||||||| |||    
T  40217327 ctatttaaattttttaaaagataaatataaggtgtcgtatatatgcgatacatccaaagatgaaaatcattagcatatacatgagtaacctcaaaccacc 40217228  T
Q  354 ctctcaaaaa---acacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggg 450  Q
    ||  ||||||   | || ||||||||||||||||||| ||     |||||||||| || ||||||||||||||| ||||||| |||||||||||||||||    
T  40217227 cttccaaaaaaatatactcacctaacaccaaaagcaaaatgacccaattctaataggcctaaaacaagacaacaaaagaggaaaaagaaatcaaatcggg 40217128  T
Q  451 gaagaa 456  Q
    ||||||    
T  40217127 gaagaa 40217122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 248 - 507
Target Start/End: Complemental strand, 45656276 - 45656027
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    |||||| |||||||||||  |||||||||||| ||||||||| ||||||||||||| ||||||| |||||||| |  | |||||||||||  ||||||||    
T  45656276 aatgttttatttaaattttttaaaagataaatgcaaggtgtcatatatatgcgataaatccaaatgtgaaaatcacgaacgtatacatgacgaacctcaa 45656177  T
Q  348 actaccctctcaaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatc 447  Q
    || |||||| |||||||||  ||| | | |||||||  |||||     |||||||||| || ||||||||||||||| ||||||| |||||||||||||     
T  45656176 accaccctcccaaaaaacaatcacgtgataccaaaacaaagatgactcaattctaataggcctaaaacaagacaaca-aagaggaaaaagaaatcaaatt 45656078  T
Q  448 ggggaagaacaaacactttcaattaatatattaataacatttaattcaacattagtacta 507  Q
    ||||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  45656077 ggggaagaacaaacactttc---------attaataacatttaattcaacattagtacta 45656027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 168 - 456
Target Start/End: Complemental strand, 27112211 - 27111923
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaaatttcc 267  Q
    |||||||| |||||||||| || | | || ||||||||||||| |||||||||||||| |  ||||||||          ||||||| ||||||||||      
T  27112211 gttcctacaaatctggaggctcggttctgtaagtgaaaagagacccgtaataaaataagattgtatttttttaaacgaacaatgttcaatttaaattttt 27112112  T
Q  268 taaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctca-aaaaaca 366  Q
    |||||||||||||||||||| | ||||||||||||| | | ||| |||||||| | ||||||||||||||| |||||||||| |||||| || |||||||    
T  27112111 taaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccctcccagaaaaaca 27112012  T
Q  367 cccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    |||||||||||| ||||||||||      |||||||||| || |||||||||| |||| ||||||| || ||||||||||| | ||||||    
T  27112011 cccacctaacacaaaaagcaagaggactcaattctaataggc-taaaacaagaaaacaaaagaggaaaaggaaatcaaatcagagaagaa 27111923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 183 - 446
Target Start/End: Complemental strand, 24397102 - 24396837
Alignment:
Q  183 gaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtat--ttttnnnnnnnnntaatgttctatttaaatttcctaaaagataaata 280  Q
    |||| |||||| || |||||||||||||   ||||||||||||||||||||  ||||          ||| || |||||||||||  |||||||||||||    
T  24397102 gaggctcagctctgtaagtgaaaagagacatgtaataaaataaaaacgtatttttttttaaaagaacaatattttatttaaattttttaaaagataaata 24397003  T
Q  281 caaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaacacccacctaacacca 380  Q
     ||||||  ||||||||| |||| |  ||||||||||||| | || |||||||||||| |||||||||||||||||  |||||| | ||| |||||||||    
T  24397002 taaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgaggaacctcaaactaccctccaaaaaaaaatccatctaacacca 24396903  T
Q  381 aaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaat 446  Q
    ||||||||| |    ||||||||||||||||||||||||||||| ||||||| || ||||||||||    
T  24396902 aaagcaagagaactcaattctaatatgcttaaaacaagacaacaaaagaggaaaaggaaatcaaat 24396837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 168 - 432
Target Start/End: Original strand, 39329317 - 39329583
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnnt-aatgttctatttaaatttc 266  Q
    |||||||||||| |||||| || | | || |||||||||||| ||||||||||||||||||| |||||||           |||||||| |||||||||     
T  39329317 gttcctacgaatttggaggctcggttctgtaagtgaaaagaggtccgtaataaaataaaaacatattttttttaaaagaacaatgttctctttaaatttt 39329416  T
Q  267 ctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctc-aaaaaac 365  Q
     ||||||||||||||||||||| ||||||||| |||| | |||||| |||||||   ||||||||||| ||| ||| |||||| |||||| | |||||||    
T  39329417 ttaaaagataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaatccataccgtatacaggaggaacatcaaaccaccctcccaaaaaaac 39329516  T
Q  366 acccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagagga 432  Q
    |||||| |||||||||||||||||      |||||||||| || |||||||||||||||||||||||    
T  39329517 acccacataacaccaaaagcaagaagaccaaattctaataggcctaaaacaagacaacagaagagga 39329583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 252 - 456
Target Start/End: Original strand, 2135331 - 2135533
Alignment:
Q  252 ttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaacta 351  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||| || || | || |||||| ||||| |||||||||| |    
T  2135331 ttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacatccaaaggtaaacatcactatcgtatatatgaggaacctcaaac-a 2135429  T
Q  352 ccctctcaaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcgggg 451  Q
    | | |  |||||||||  ||||||||||||||||||||      |||||||||| || |||||||||| |||| ||||| | || |||||||||||||||    
T  2135430 ctc-caaaaaaaacactgacctaacaccaaaagcaagaggacccaattctaataagcctaaaacaagataacaaaagagaaaaatgaaatcaaatcgggg 2135528  T
Q  452 aagaa 456  Q
    |||||    
T  2135529 aagaa 2135533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 248 - 456
Target Start/End: Complemental strand, 36178773 - 36178564
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||| | ||||| |||||||| | |||| |||||||||  || | |||    
T  36178773 aatgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatgaagaatc-caa 36178675  T
Q  348 actaccctctc-aaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaac-agaagaggagaaagaaatcaaa 445  Q
    || |||||| | ||||||||| |||||||||||||||||||||       ||||||||  || ||||||||||||||  |||||||| || |||||||||    
T  36178674 accaccctcccaaaaaaacactcacctaacaccaaaagcaagaggacccgattctaatgggcctaaaacaagacaacgggaagaggaaaatgaaatcaaa 36178575  T
Q  446 tcggggaagaa 456  Q
    || ||||||||    
T  36178574 tcagggaagaa 36178564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 248 - 456
Target Start/End: Original strand, 36362877 - 36363085
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    |||| ||| |||||||||  |||||||||||||||| ||| ||||||||||| ||| | ||||| ||| |||| | |||| ||||||| || ||||||||    
T  36362877 aatgctctgtttaaattttttaaaagataaatacaaagtgccgtatatatgcaatacacccaaatgtggaaatcactaccatatacat-aggaacctcaa 36362975  T
Q  348 actaccctctcaaaaaa-cacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaat 446  Q
    || |||||||||| ||| |||||||| |||||||||||| ||||     |||||||||| |  |||||||||||||| |||||||| || ||||||||||    
T  36362976 accaccctctcaacaaagcacccacccaacaccaaaagcgagatgactcaattctaataggtctaaaacaagacaactgaagaggaaaatgaaatcaaat 36363075  T
Q  447 cggggaagaa 456  Q
    | ||||||||    
T  36363076 cagggaagaa 36363085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 250 - 456
Target Start/End: Complemental strand, 15735189 - 15734988
Alignment:
Q  250 tgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaac 349  Q
    ||||||||||||||||  |||||||||||||||||  ||||||||||| |     | | |||  ||||||| ||||||||||||||||| ||| ||||||    
T  15735189 tgttctatttaaattttttaaaagataaatacaagacgtcgtatatatac-----accaaaaaatgaaaatcattaccgtatacatgaggaacttcaaac 15735095  T
Q  350 taccctctcaaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcgg 449  Q
     ||||||  |||||||| ||||||||||||||||||||||      |||||||| | || |||||||||  |||||||||||| || |||||||||||||    
T  15735094 caccctccaaaaaaacatccacctaacaccaaaagcaagaagacccaattctaacaggcctaaaacaagtgaacagaagaggaaaaggaaatcaaatcgg 15734995  T
Q  450 ggaagaa 456  Q
     ||||||    
T  15734994 agaagaa 15734988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 268 - 431
Target Start/End: Original strand, 4167917 - 4168082
Alignment:
Q  268 taaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctc--tcaaaaaac 365  Q
    |||||||||||||||||||| ||||||||||||||| | |||||||||||||| | |||| |||||||||| |||||||||  ||| ||    |||||||    
T  4167917 taaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacctcaaatcaccttcctagaaaaaac 4168016  T
Q  366 acccacctaacaccaaaagcaagatagggta-attctaatatgcttaaaacaagacaacagaagagg 431  Q
    || ||||||||||||||| |||||| |  || ||| ||||| || ||||||||||||||||||||||    
T  4168017 actcacctaacaccaaaaccaagat-gactatattttaataggcctaaaacaagacaacagaagagg 4168082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 249 - 349
Target Start/End: Original strand, 37744916 - 37745017
Alignment:
Q  249 atgttctatttaaatttcct-aaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    |||||||||||||||||  | |||||||||||| ||||||||| |||||||||||| |||||||||||||||| | |||||||||| |||| ||||||||    
T  37744916 atgttctatttaaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaacctcaa 37745015  T
Q  348 ac 349  Q
    ||    
T  37745016 ac 37745017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 268 - 344
Target Start/End: Original strand, 35779351 - 35779427
Alignment:
Q  268 taaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacct 344  Q
    ||||||||||||||||||||||||||||||||| || | |||||||||||||| ||||||||||||||||| |||||    
T  35779351 taaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacct 35779427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 32128685 - 32128590
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| ||||||||||||||||||| || | |||||||||||||| | |||||||||||| |||||||    
T  32128685 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacataagaaacc 32128590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 359 - 450
Target Start/End: Original strand, 37746839 - 37746930
Alignment:
Q  359 aaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggg 450  Q
    ||||||| ||||||||||||||||||||||||     |||||||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  37746839 aaaaaacgcccacctaacaccaaaagcaagatgacccaattctaataggcctaaaacaagacaacagaagaggaaaaagaaatcaaatcggg 37746930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 54780878 - 54780783
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | |||||||||||||| | ||||||||||||||| ||||    
T  54780878 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 54780783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 168 - 348
Target Start/End: Original strand, 10041924 - 10042106
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgta--tttttnnnnnnnnntaatgttctatttaaattt 265  Q
    ||||||||||||| |||||||||| | || |||||||||||| |||||| |||||||||| ||||  |||||          ||||||||||||||||||    
T  10041924 gttcctacgaatcgggaggttcagttctgtaagtgaaaagaggtccgtagtaaaataaaagcgtatttttttttaaaagaacaatgttctatttaaattt 10042023  T
Q  266 cctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaa 348  Q
       |||| |||||||||||||| ||||| |||| |||| | | ||| |||||||| | ||||||||||| ||| |||||||||    
T  10042024 ttaaaaaaataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtatacaggaggaacctcaaa 10042106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 247 - 343
Target Start/End: Original strand, 37777228 - 37777324
Alignment:
Q  247 taatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||||| ||||  ||||||||||||| |||||| |||||||||||| || | |||||||||||||| | ||||||||||||||| ||||    
T  37777228 taatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 37777324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 10979001 - 10978906
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||||||||||| || | ||| | |||||||| | ||||||||||||||| ||||    
T  10979001 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgaggaacc 10978906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 34027680 - 34027585
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| ||||||||||||||||||| || | |||||||||||||| | ||| ||||||||||| ||||    
T  34027680 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgaggaacc 34027585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 34768580 - 34768675
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||| |||||||||||| || | ||| |||||||||| ||||||||||||||||| ||||    
T  34768580 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtgaaaatgattaccgtatacatgaggaacc 34768675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 38209597 - 38209692
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||||||||| | ||||||||||||||| ||||    
T  38209597 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 38209692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 43455537 - 43455632
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||| |||||||||||| || | |||||||||||||| | ||||||||||||||| ||||    
T  43455537 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 43455632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 248 - 390
Target Start/End: Original strand, 51691921 - 51692066
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatc--caaaggtgaaaattattaccgtatacatgagaaacctc 345  Q
    ||||||||||||||||||  |||||||||||||||||||| |||||||||||| || | |   ||| |||||||| | |||| |||||| ||  ||||||    
T  51691921 aatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacaccaaaaaaagtgaaaatcactaccatatacacgatgaacctc 51692020  T
Q  346 aaactaccct-ctcaaaaaacacccacctaacaccaaaagcaagat 390  Q
    |||| ||||| |  ||||||||| |||||||||| |||||||||||    
T  51692021 aaaccaccctccgaaaaaaacactcacctaacactaaaagcaagat 51692066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 13460306 - 13460221
Alignment:
Q  250 tgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacat 335  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||||||| |||| ||| | |||||||| | ||||||||||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacat 13460221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 2790747 - 2790842
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||  |||||||||||| || | |||||||||||||| | ||||||||||||||| ||||    
T  2790747 aatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 2790842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 40089597 - 40089522
Alignment:
Q  268 taaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| |||||| |||||||||||| || |||||||||||||||| | ||||||||||||||| ||||    
T  40089597 taaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacc 40089522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 47129088 - 47128993
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||| ||||| | ||||||||||||||| ||||    
T  47129088 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacc 47128993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 48209341 - 48209246
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| | ||||| || | ||||||||||||||||||||    
T  48209341 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatgagaaacc 48209246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 32915485 - 32915391
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| ||||  |||||||||||||||||||| |||||||||| | || | ||| |||| ||||| ||||||||||||||||| ||||    
T  32915485 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgaggaacc 32915391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 337
Target Start/End: Complemental strand, 37514759 - 37514671
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatga 337  Q
    |||||||||||| ||||  |||||||||||||||||||| |||||||||||| || |  || |||||||||| | ||||||||||||||    
T  37514759 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatga 37514671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 1105632 - 1105538
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| ||||  ||||||||||||||||||| ||||||||||||| || | | | |||||||||| | |||| |||||||||| ||||    
T  1105632 atgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgagcaacc 1105538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 5128852 - 5128945
Alignment:
Q  252 ttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctc 345  Q
    ||||||||| ||||  |||||||||||||||||||| |||||||||||  |  | ||| |||||||||| | ||||||||||||||| ||||||    
T  5128852 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgaggaacctc 5128945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 24614142 - 24614077
Alignment:
Q  162 agggctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaa 227  Q
    ||||| |||| ||||||||||||||||||||| || ||||||||||||  ||||||||||||||||    
T  24614142 agggccgttcttacgaatctggaggttcagctctgtaagtgaaaagaggcccgtaataaaataaaa 24614077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 391
Target Start/End: Original strand, 29425187 - 29425323
Alignment:
Q  255 tatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccc 354  Q
    |||||||||||  ||||| ||||||| |||||| |||||||||||  || ||  |||||||||||||  |||| || ||| ||| |||||||||| ||||    
T  29425187 tatttaaattttttaaaaaataaatataaggtgccgtatatatgcagtacatttaaaggtgaaaattgctaccatacacacgagtaacctcaaaccaccc 29425286  T
Q  355 tctcaaaaaacacccacctaacaccaaaagcaagata 391  Q
    |    |||||||| |||||||||| ||||| ||||||    
T  29425287 taaataaaaacactcacctaacacaaaaagtaagata 29425323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 5893200 - 5893125
Alignment:
Q  162 agggctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtattttt 237  Q
    ||||| |||||||| ||| |||||| || ||| || |||||||||||| |||||||||||||||||| ||||||||    
T  5893200 agggccgttcctacaaatttggaggctcggctctgtaagtgaaaagaggtccgtaataaaataaaaatgtattttt 5893125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 54083248 - 54083343
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||| |||||||| ||||  ||||||||||||| |||||| |||||||||||| || | |||||| | ||||| | ||||||||||||||| ||||    
T  54083248 aatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgaggaacc 54083343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 10428203 - 10428273
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaa 318  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| ||||||||    
T  10428203 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaa 10428273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 39655260 - 39655337
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattatta 325  Q
    ||||||||||||||||||  |||||||||||||||| ||  || ||||||||| || | |||||||||||||| ||||    
T  39655260 aatgttctatttaaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaatcatta 39655337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 16845123 - 16845027
Alignment:
Q  248 aatgttctatttaaatttcct-aaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  | |||||||||||| |||||||||||||||||   || | |||| ||||||||| | ||||||||||||||| ||||    
T  16845123 aatgttctatttatatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgaggaacc 16845027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 320
Target Start/End: Original strand, 16922335 - 16922407
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaat 320  Q
    ||||||||||||| ||||  ||||||||||||| || |||||||||||||||  |||  ||||||||||||||    
T  16922335 aatgttctatttatattttttaaaagataaatataaagtgtcgtatatatgcagtatccccaaaggtgaaaat 16922407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 19498603 - 19498510
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||| ||  |||||||| || | |||||||||||||| | ||| ||||||||||| ||||    
T  19498603 aatgttctatttatattttttaaaagataaatataaggtgccg--tatatgcggtacagccaaaggtgaaaatgactactgtatacatgaggaacc 19498510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 320
Target Start/End: Complemental strand, 51964788 - 51964737
Alignment:
Q  269 aaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaat 320  Q
    ||||||||||||||||||| ||||||||||||||| | ||| ||||||||||    
T  51964788 aaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaat 51964737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 4167847 - 4167916
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtattttt 237  Q
    |||| |||||||| ||||| ||   |||| ||||||||||||  ||||||||||||||||||||||||||    
T  4167847 gttcgtacgaatccggaggctcgattttgtaagtgaaaagaggcccgtaataaaataaaaacgtattttt 4167916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 17679497 - 17679432
Alignment:
Q  252 ttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaa 317  Q
    ||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||||||    
T  17679497 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 17679432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 30507044 - 30507113
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtattttt 237  Q
    ||||||||||||| ||||| ||   |||| ||||||||||||| || |||||||||||||| ||||||||    
T  30507044 gttcctacgaatccggaggctcgattttgtaagtgaaaagagacccataataaaataaaaatgtattttt 30507113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 295
Target Start/End: Original strand, 23508516 - 23508564
Alignment:
Q  248 aatgttctattta-aatttcctaaaagataaatacaaggtgtcgtatat 295  Q
    ||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  23508516 aatgttctatttataattttttaaaagataaatacaaggtgtcgtatat 23508564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 11906822 - 11906896
Alignment:
Q  163 gggctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtattttt 237  Q
    |||| ||||||||||||  ||||| || ||| |  ||||||||||||  ||||||||||||||||| ||||||||    
T  11906822 gggccgttcctacgaattcggaggctcggctatataagtgaaaagaggcccgtaataaaataaaaatgtattttt 11906896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 338
Target Start/End: Complemental strand, 35465207 - 35465118
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgag 338  Q
    |||||| |||||| ||||  || |||||||||| |||||| |||||||||||| || | | ||| |||||||| | |||||||||||||||    
T  35465207 aatgttatatttatattttttacaagataaataaaaggtg-cgtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgag 35465118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 4e-58; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 201 - 456
Target Start/End: Complemental strand, 26804098 - 26803847
Alignment:
Q  201 tgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcg 300  Q
    ||||||||| ||||||||||||| |||||||||||||          |||| | |||||||||||  ||||||||||||||||| |||||||||||||||    
T  26804098 tgaaaagaggtccgtaataaaatgaaaacgtatttttttaaagaac-aatgctatatttaaattttttaaaagataaatacaagatgtcgtatatatgcg 26804000  T
Q  301 atatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaacacccacctaacaccaaaagcaagatagggtaattc 400  Q
    |||   |  ||||||||||| | |||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||    |||||    
T  26803999 ata---cacaaggtgaaaatcactaccgtatacatgagaaacctcaaaccaccctcccaaaaaacactcacctaacaccaaaagcaagataactcaattc 26803903  T
Q  401 taatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    ||||| |  ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  26803902 taataggactaaaacaagacaacagaagaggaaaaagaaatcaaatcgggaaagaa 26803847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 162 - 456
Target Start/End: Original strand, 39134639 - 39134938
Alignment:
Q  162 agggctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaa---tgttctatt 258  Q
    ||||| ||||||||||||| ||||| || |||  | |||||||||||||  |||||||||||||||||||||||||          ||   |||||||||    
T  39134639 agggccgttcctacgaatccggaggctcggctccgtaagtgaaaagagactcgtaataaaataaaaacgtattttttttttaaaagaacaatgttctatt 39134738  T
Q  259 taaatttcctaaaa-gataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctct 357  Q
    |||||||  ||||| |||||||||||||||  |||||||||| ||| | |||||||||| ||| | ||| ||||||||||| |||||||||| ||||||     
T  39134739 taaattttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgaggaacctcaaaccaccctcc 39134838  T
Q  358 c-aaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    | |||||||||||||||||||||||||||||||      |||||||||| |||||||||||||||||||||||||| ||  |||||||||||||||||||    
T  39134839 caaaaaaacacccacctaacaccaaaagcaagaggacccaattctaataggcttaaaacaagacaacagaagaggaaaagaaaatcaaatcggggaagaa 39134938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 162 - 389
Target Start/End: Original strand, 38546955 - 38547184
Alignment:
Q  162 agggctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnnt-aatgttctattta 260  Q
    ||||| |||||||||||| |||||| || ||| ||||||||||||| |  ||||||||||||||||| | ||||||         | |||||||||||||    
T  38546955 agggccgttcctacgaatttggaggatcggctctgcaagtgaaaaggggcccgtaataaaataaaaaggaatttttttttaaagatcaatgttctattta 38547054  T
Q  261 aatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctc-a 359  Q
    |||||  |||||||||||||||||||| |||||||||| | || | ||||| |||||||| | || | |||||||||| |||||||||| |||||| | |    
T  38547055 aattttttaaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgaggaacctcaaaccaccctcccaa 38547154  T
Q  360 aaaaacacccacctaacaccaaaagcaaga 389  Q
    ||||||||||||||||||| ||||| ||||    
T  38547155 aaaaacacccacctaacactaaaagtaaga 38547184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 168 - 364
Target Start/End: Complemental strand, 45758684 - 45758485
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtat---ttttnnnnnnnnntaatgttctatttaaatt 264  Q
    |||||||||||||  |||| || ||| || |||||||||||| |||| ||||||||||||| ||||   ||||          |||||||||||||||||    
T  45758684 gttcctacgaatccagaggctcggctctgtaagtgaaaagaggtccgaaataaaataaaaatgtatattttttttaaaagaacaatgttctatttaaatt 45758585  T
Q  265 tcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaa 364  Q
    |  |||||||||||| |||||||| |||||||||  ||| |||||||||||||||| | ||||||||||||||| |||||||||| ||| || |||||||    
T  45758584 ttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccatcccaaaaaa 45758485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 172 - 378
Target Start/End: Complemental strand, 6221860 - 6221654
Alignment:
Q  172 ctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaaatttcctaaa 271  Q
    ||||||||||||||  || | | || || |||||||||| |||||||||||||||||  |||||||          ||||||||||||||||||  ||||    
T  6221860 ctacgaatctggagactcggttctgtaaatgaaaagagacccgtaataaaataaaaatttattttttttaaagaacaatgttctatttaaatttt-taaa 6221762  T
Q  272 agataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaa-acaccca 370  Q
    |||||||||||| ||| |||||||| ||| || ||| ||| |||||||| |||| |||||| ||||| |||||||||| |||||  |||||| |||||||    
T  6221761 agataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgaggaacctcaaaccacccttccaaaaacacaccca 6221662  T
Q  371 cctaacac 378  Q
    ||||||||    
T  6221661 cctaacac 6221654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 250 - 349
Target Start/End: Complemental strand, 38853627 - 38853529
Alignment:
Q  250 tgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaac 349  Q
    ||||||||||||||||  |||| ||||||||||||||||||||||||||   ||||||||||||||||||| | ||||||||||||||| ||||||||||    
T  38853627 tgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatgag-aacctcaaac 38853529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 198 - 423
Target Start/End: Complemental strand, 5533470 - 5533242
Alignment:
Q  198 aagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaaatttcct-aaaagataaatacaaggtgtcgtatata 296  Q
    ||||||||||||| ||||||||||||||||| ||||||||          ||| ||||||||||||||  | |||||||||| |||||||| ||||||||    
T  5533470 aagtgaaaagagacccgtaataaaataaaaatgtatttttttaaaagaacaatattctatttaaatttttttaaaagataaacacaaggtgccgtatata 5533371  T
Q  297 tgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctc--aaaaaacacccacctaacaccaaaagcaagataggg 394  Q
    ||   || |  ||||||||||||| | ||||||||||||||| || ||||||| ||| || |  ||||||| ||||||||||| |||||||||||         
T  5533370 tgatgtacaatcaaaggtgaaaatcactaccgtatacatgaggaaactcaaaccaccatcccaaaaaaaactcccacctaacatcaaaagcaagaggatc 5533271  T
Q  395 taattctaatatgcttaaaacaagacaac 423  Q
     |||||||||| || ||||||||||||||    
T  5533270 caattctaataggcgtaaaacaagacaac 5533242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 9173029 - 9173124
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||| |||||||||||| || |||||||||||||||| | ||||||||||||||| ||||    
T  9173029 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacc 9173124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 9181011 - 9181106
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||| |||||||||||| || |||||||||||||||| | ||||||||||||||| ||||    
T  9181011 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacc 9181106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 268 - 456
Target Start/End: Original strand, 10925980 - 10926159
Alignment:
Q  268 taaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaacac 367  Q
    ||||| |||||||||| ||| |||||||||| |||  |||||||| ||||||| | ||||||||||||||| | |||||||  |||  || |||||||||    
T  10925980 taaaaaataaatacaatgtgccgtatatatgagatgcatccaaagatgaaaatcactaccgtatacatgaggatcctcaaatcacc--ctaaaaaaacac 10926077  T
Q  368 ccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
     ||||||||||||||||||||| |    | |||||||       ||||||||||||||||||||| || ||||||||||||| ||||||    
T  10926078 tcacctaacaccaaaagcaagagaatccagttctaat-------aaacaagacaacagaagaggaaaaggaaatcaaatcggagaagaa 10926159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 27559744 - 27559649
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| ||||||||||||||||||| || | |||||||||||||| | ||||||||||||||| ||||    
T  27559744 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 27559649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 50881537 - 50881440
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctc 345  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||||||||||| || ||| | |||||||||| | ||| ||||||||||| ||||||    
T  50881537 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgaggaacctc 50881440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 5316787 - 5316692
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||||||||| | ||||||||||||||| ||||    
T  5316787 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 5316692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 23185534 - 23185439
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||||||||| | ||||||||||||||| ||||    
T  23185534 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacc 23185439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 387
Target Start/End: Original strand, 43235774 - 43235916
Alignment:
Q  248 aatgttctatttaaatttccta--aaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctc 345  Q
    ||||||||||||||||||  |   ||||||||||||||| |||||||||||||   || | |||||||||||||| | || |||||||||||| ||||||    
T  43235774 aatgttctatttaaatttttttttaaagataaatacaagatgtcgtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacctc 43235873  T
Q  346 aaactaccctctc-aaaaaacacccacctaacaccaaaagcaa 387  Q
    |||| ||| || | |||||||| | ||||||||||||||||||    
T  43235874 aaaccaccatcccaaaaaaacatcaacctaacaccaaaagcaa 43235916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 44655848 - 44655753
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||||||||||| || | ||| |||| ||||| | ||||||||||||||| ||||    
T  44655848 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacc 44655753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 249 - 345
Target Start/End: Complemental strand, 6771897 - 6771801
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctc 345  Q
    |||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||||||||| | ||||||||||| ||| ||||||    
T  6771897 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacacgaggaacctc 6771801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 248 - 379
Target Start/End: Complemental strand, 33170866 - 33170734
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    |||||| |||||||||||  |||||  ||||||||| |||| ||||||||||| || | | || ||||||||| | ||||||||||||||||||||| ||    
T  33170866 aatgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgagaaaccttaa 33170767  T
Q  348 actaccct-ctcaaaaaacacccacctaacacc 379  Q
    || ||||| || |||||||  ||||||||||||    
T  33170766 accaccctcctaaaaaaacgtccacctaacacc 33170734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 17169063 - 17168968
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| ||||||| ||||||||||| || | |||||||||||||| | |||| |||||||||| ||||    
T  17169063 aatgttctatttatattttttaaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgaggaacc 17168968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 14146406 - 14146312
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| || ||||||| | ||||||||||||||| ||||    
T  14146406 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 14146312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 337
Target Start/End: Original strand, 40501795 - 40501885
Alignment:
Q  247 taatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatga 337  Q
    ||||| |||||||| ||||  ||||||||||||| ||||||||||||||||||| || | |||||||| ||||| | ||||||||||||||    
T  40501795 taatgatctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatga 40501885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 249 - 338
Target Start/End: Complemental strand, 16140161 - 16140072
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgag 338  Q
    |||||||||||| ||||  ||||||||||||||||||||| ||||||||||| || | | | |||||||||| | |||||||||||||||    
T  16140161 atgttctatttatattttttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgag 16140072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 332
Target Start/End: Complemental strand, 6889718 - 6889634
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtata 332  Q
    ||||||||||||| ||||  |||||||||||||||| || ||||||||||||| || ||||| |||||||||| ||| |||||||    
T  6889718 aatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgattgccgtata 6889634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 332
Target Start/End: Complemental strand, 6891564 - 6891480
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtata 332  Q
    ||||||||||||| ||||  |||||||||||||||| || ||||||||||||| || ||||| |||||||||| ||| |||||||    
T  6891564 aatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgattgccgtata 6891480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 1366884 - 1366979
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||| |||||||||||| || | |||||| ||||||| | ||||||||||| ||| ||||    
T  1366884 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaacc 1366979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 4971624 - 4971719
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||  |||||||||||| || | ||| | |||||||| | ||||||||||||||| ||||    
T  4971624 aatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataagtgaaaatgactaccgtatacatgaggaacc 4971719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 5027656 - 5027561
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||||||||| | |||| |||| ||||| ||||    
T  5027656 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgaggaacc 5027561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 247 - 330
Target Start/End: Complemental strand, 35392377 - 35392295
Alignment:
Q  247 taatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgta 330  Q
    ||||||| |||||||||||  |||  ||||||||||||||| |||||||||||| ||||||||||||||||||| | |||||||    
T  35392377 taatgttttatttaaattttttaag-gataaatacaaggtgccgtatatatgcggtatatccaaaggtgaaaatcactaccgta 35392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 248 - 334
Target Start/End: Original strand, 21740943 - 21741029
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtataca 334  Q
    ||||||||||||  ||||  |||||||||||||||||||| ||||||||||||||| | ||| |||||||||| | |||| ||||||    
T  21740943 aatgttctatttgtattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 343
Target Start/End: Original strand, 41697144 - 41697238
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| ||||  |||||||||||||||| || ||||||||||||  || ||||| | |||||||| | ||||||||||||||| ||||    
T  41697144 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgaggaacc 41697238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 248 - 344
Target Start/End: Complemental strand, 50146403 - 50146307
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacct 344  Q
    ||||||||||||||| ||  | |||||||||| ||||||| ||| |||||| |||| | |||||||| ||||| |||||| |||||||||| |||||    
T  50146403 aatgttctatttaaactttttgaaagataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatgaggaacct 50146307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 19955824 - 19955729
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||| |||||||| ||||  ||||||||||||| |||||  |||||||||||| || | |||||||||||||| | ||||||||| ||||| ||||    
T  19955824 aatgatctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacc 19955729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 3406524 - 3406430
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| ||||  |||||||||||||||||||| |||||||||||  || |  |  |||||||||| | ||||||||||||||| ||||    
T  3406524 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacc 3406430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 249 - 343
Target Start/End: Original strand, 3440296 - 3440390
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| ||||  |||||||||||||||||||| |||||||||||  || |  |  |||||||||| | ||||||||||||||| ||||    
T  3440296 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacc 3440390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 248 - 338
Target Start/End: Original strand, 51607445 - 51607536
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtc-gtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgag 338  Q
    |||||| |||||| ||||  ||||||||||||| |||||| | ||||||||||| || | ||||| |||||||| | |||||||||||||||    
T  51607445 aatgttttatttatattttttaaaagataaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgag 51607536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 13913486 - 13913583
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcg--tatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||| |||||||| ||||  ||||||||||||| ||| || ||  |||||||||| || | | ||| |||||||| | ||||||||||||||||||||    
T  13913486 aatgatctatttatattttttaaaagataaatataagttgccgggtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatgagaaacc 13913583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 44895700 - 44895664
Alignment:
Q  307 ccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  44895700 ccaaaggtgaaaatgattaccgtatacatgaggaacc 44895664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 9e-56; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 168 - 456
Target Start/End: Complemental strand, 20611968 - 20611680
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaaatttcc 267  Q
    ||||||||||||  ||||| || ||| || ||||||||||||  || ||| ||||||||||||| |||||          ||||||||| ||||||||      
T  20611968 gttcctacgaattcggaggctcggctctgtaagtgaaaagaggcccataaaaaaataaaaacgtttttttttcaagata-aatgttctacttaaattttt 20611870  T
Q  268 taaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctc-aaaaaaca 366  Q
    |||| ||||||||||||||||||||||||| ||| | |||||||||||||||| | ||||||||||||||| ||||||||||||||||| | ||||||||    
T  20611869 taaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaaactaccctcccaaaaaaaca 20611770  T
Q  367 cccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    | |||||||||||||||| || ||     |||||||||| || ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  20611769 ctcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaacaagacaacaaaagaggaaaaagaaatcaaatcggggaagaa 20611680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 168 - 456
Target Start/End: Original strand, 2477511 - 2477799
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaaatttcc 267  Q
    |||||||| |||||||||| || | | || ||||||||||||| |||||||||||||| |  ||||||||          ||||||| ||||||||||      
T  2477511 gttcctacaaatctggaggctcggttctgtaagtgaaaagagacccgtaataaaataagattgtatttttttaaacgaacaatgttcaatttaaattttt 2477610  T
Q  268 taaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctca-aaaaaca 366  Q
    |||||||||||||||||||| | ||||||||||||| | | ||| |||||||| | ||||||||||||||| |||||||||| |||||| || |||||||    
T  2477611 taaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccctcccagaaaaaca 2477710  T
Q  367 cccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    |||||||||||| ||||||||||      |||||||||| || |||||||||| |||| ||||||| || ||||||||||| | ||||||    
T  2477711 cccacctaacacaaaaagcaagaggactcaattctaataggc-taaaacaagaaaacaaaagaggaaaaggaaatcaaatcagagaagaa 2477799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 28075882 - 28075787
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||| ||||||||||||||| | |||||||||||||| | ||||||||||||||| ||||    
T  28075882 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacc 28075787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 338
Target Start/End: Original strand, 1155856 - 1155946
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgag 338  Q
    ||||||||||||| ||||  |||||||||||||||||||||| |||||||||| || ||||| |||||||||| | |||||||||||||||    
T  1155856 aatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgag 1155946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 247 - 343
Target Start/End: Complemental strand, 33774217 - 33774121
Alignment:
Q  247 taatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||||| |||||||| | ||||||||||||||| ||||    
T  33774217 taatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgaggaacc 33774121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 6159537 - 6159430
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||||||||| ||||  |||||||||||||||| |||||||||||||||| || || |||||||| |||| | ||||||||| || || ||||||||    
T  6159537 aatgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggtggaaatcactaccgtatatataaggaacctcaa 6159438  T
Q  348 actaccct 355  Q
    || |||||    
T  6159437 accaccct 6159430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 13727406 - 13727501
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||||||||| | ||||||||||||||| ||||    
T  13727406 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 13727501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 20711727 - 20711822
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||| |||||||||||| || | |||||||||||||| | ||||||||||||||| ||||    
T  20711727 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 20711822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 252 - 378
Target Start/End: Original strand, 21183686 - 21183813
Alignment:
Q  252 ttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaacta 351  Q
    ||||||||||||||  |||||||||||||||| ||  |||||||||| | || | |||||| ||||||| | ||||||||||||||| |||||||||| |    
T  21183686 ttctatttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacctcaaacca 21183785  T
Q  352 ccctctc-aaaaaacacccacctaacac 378  Q
    ||| | | |||||||| |||||||||||    
T  21183786 cccacccaaaaaaacatccacctaacac 21183813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 21479593 - 21479498
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||||||||| | ||||||||||||||| ||||    
T  21479593 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 21479498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 30121861 - 30121789
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaat 320  Q
    |||||| |||||||||||  ||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  30121861 aatgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaat 30121789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 252 - 343
Target Start/End: Original strand, 27788699 - 27788790
Alignment:
Q  252 ttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||| ||||  ||||||||||||| |||||| |||||||||||| || | |||||||||||||| | ||||||||||||||| ||||    
T  27788699 ttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 27788790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 338
Target Start/End: Complemental strand, 21280644 - 21280554
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgag 338  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||| ||||| | |||||||||||||||    
T  21280644 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgag 21280554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 248 - 337
Target Start/End: Complemental strand, 17354053 - 17353964
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatga 337  Q
    ||||||||||||| ||||  ||||||||||||| ||||||||||||||||||| || | ||||| |||||||| | || |||||||||||    
T  17354053 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatga 17353964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 272 - 390
Target Start/End: Complemental strand, 4037023 - 4036904
Alignment:
Q  272 agataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccct-ctcaaaaaacaccca 370  Q
    |||||||||||||||| |||||||||  | || | |||||||| || || | ||||||||| ||||| ||| |||||| ||||| |  ||||||||| ||    
T  4037023 agataaatacaaggtgccgtatatatatggtacacccaaaggtaaagatcactaccgtatatatgaggaacttcaaaccaccctccaaaaaaaacactca 4036924  T
Q  371 cctaacaccaaaagcaagat 390  Q
    ||||||||||||||||||||    
T  4036923 cctaacaccaaaagcaagat 4036904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 19737699 - 19737794
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  | |||||||||||||||||| |||||||||||| || | | | |||||||||| | ||||||||||||||| ||||    
T  19737699 aatgttctatttatatttttttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacc 19737794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 343
Target Start/End: Original strand, 24711007 - 24711101
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| ||||  |||||||||||||||||||| |||||||||| | || |  || |||||||||| | ||||||||||||||| ||||    
T  24711007 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgaggaacc 24711101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 314 - 430
Target Start/End: Original strand, 27131254 - 27131371
Alignment:
Q  314 tgaaaattattaccgtatacatgagaaacctcaaactaccctctc-aaaaaacacccacctaacaccaaaagcaagatagggt-aattctaatatgctta 411  Q
    ||||||| | || ||||||||||||||| ||||||| |||||| | |||||||| |||||||||| |||||| |||| ||| | |||||||||| || ||    
T  27131254 tgaaaatcactatcgtatacatgagaaatctcaaacaaccctcacaaaaaaacatccacctaacagcaaaagtaaga-aggctcaattctaataagccta 27131352  T
Q  412 aaacaagacaacagaagag 430  Q
    |||| ||||||||||||||    
T  27131353 aaactagacaacagaagag 27131371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 34397956 - 34397859
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctc 345  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | | |||||| ||||| | || |||| ||||||| ||||||    
T  34397956 aatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgaggaacctc 34397859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 235231 - 235328
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcg--tatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||| |||||||| ||||  ||||||||||||| |||||| ||  ||||||| |  || | |||||| ||||||| | ||||||||||||||||||||    
T  235231 aatgatctatttatattttttaaaagataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgagaaacc 235328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 343
Target Start/End: Original strand, 30832532 - 30832626
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| ||||  ||||| ||||||||||| || |||||||||| | || | ||| || ||||||| | |||||||| |||||| ||||    
T  30832532 atgttctatttacattttttaaaaaataaatacaagatgccgtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgaggaacc 30832626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 300
Target Start/End: Original strand, 27314185 - 27314238
Alignment:
Q  248 aatgttctatttaaatttcctaaaa-gataaatacaaggtgtcgtatatatgcg 300  Q
    ||||||||||||| ||||  ||||| ||||||||||||||| ||||||||||||    
T  27314185 aatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcg 27314238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 27131158 - 27131194
Alignment:
Q  201 tgaaaagagatccgtaataaaataaaaacgtattttt 237  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  27131158 tgaaaagagatctgtaataaaataaaaacgtaatttt 27131194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 1e-54; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 161 - 456
Target Start/End: Original strand, 41677091 - 41677389
Alignment:
Q  161 aagggctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnnta--atgttctatt 258  Q
    |||||| ||||||||||||  ||||| || ||| ||  |||||||||||| |  |||||||||||||||||||||||          |  ||||||||||    
T  41677091 aagggcggttcctacgaattcggaggctcggctctgtgagtgaaaagagacctataataaaataaaaacgtatttttttttaaaagaacaatgttctatt 41677190  T
Q  259 taaatttcct-aaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctct 357  Q
    |||||||  | |||||||||||||||| |||||||||||||||||| ||| |||||||||||| | ||| ||||||||||| |||||||||| ||||||     
T  41677191 taaatttttttaaaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgaggaacctcaaaccaccctcc 41677290  T
Q  358 caaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
     |||||||||||||||||||||||||||||||       ||||||||| || ||||||||||||||| ||||||| || ||||||||||||||||||||    
T  41677291 aaaaaaacacccacctaacaccaaaagcaagaggacccgattctaataggcctaaaacaagacaacataagaggaaaaggaaatcaaatcggggaagaa 41677389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 168 - 456
Target Start/End: Original strand, 15167339 - 15167629
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttt---tnnnnnnnnntaatgttctatttaaatt 264  Q
    ||||||||||||||| ||| || ||| || ||||||||| |  ||||||||||||||||||||||||||   |          |||||||||||||||||    
T  15167339 gttcctacgaatctgaaggctctgctctgtaagtgaaaaaaagtccgtaataaaataaaaacgtattttatttttaaaagaacaatgttctatttaaatt 15167438  T
Q  265 tcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaa 364  Q
    |  ||||||||||||| || |||| |||||||||||||| | ||||| |||||||| | || |||||||||||| |||||||||| ||||| || |||||    
T  15167439 ttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaaccaccct-tccaaaaa 15167537  T
Q  365 cacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
     ||||||||||||||||||| ||||      |||||||||| || ||||||||||||||||||||||| || ||||||||||||| ||||||    
T  15167538 aacccacctaacaccaaaagtaagaggacccaattctaataggcctaaaacaagacaacagaagaggaaaaggaaatcaaatcggagaagaa 15167629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 198 - 456
Target Start/End: Complemental strand, 8646352 - 8646087
Alignment:
Q  198 aagtgaaaagagatccgtaataaaataaaaacgta-tttttnnnnnnnnntaatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatata 296  Q
    |||| ||||||||||| |||||||||||||||||| |||||          ||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  8646352 aagtcaaaagagatccttaataaaataaaaacgtaatttttttaaaagaacaatgttctatttaaattttttaaaagataaatacaaggtatcgtatata 8646253  T
Q  297 tgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaact------accctctc-aaaaaacacccacctaacaccaaaagcaaga 389  Q
    ||| ||| |  |||| |||||||| | |||||||||||| ||||||||||||||      |||||| | ||||||||| |||||||||||||||||||||    
T  8646252 tgc-atacacgcaaatgtgaaaatcactaccgtatacataagaaacctcaaactcaaaccaccctcccaaaaaaacacacacctaacaccaaaagcaaga 8646154  T
Q  390 tagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    |    |||||| |||| || ||||||||||||||| ||||||| || ||||||||||| ||||||||    
T  8646153 tgacctaattcgaataggcctaaaacaagacaacataagaggaaaaggaaatcaaatcagggaagaa 8646087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 168 - 456
Target Start/End: Complemental strand, 15078935 - 15078647
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnn-taatgttctatttaaatttc 266  Q
    ||||||||||||||| ||| || ||| || |||||||||||  |||||||||||||||||||||||||||          |||||||||||||||| ||     
T  15078935 gttcctacgaatctgaaggctctgctctgtaagtgaaaagaagtccgtaataaaataaaaacgtattttttttaaaagaataatgttctatttaaaattt 15078836  T
Q  267 ctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaaca 366  Q
     ||||||||||||| ||||||  |||||||||| ||| | ||||| |||||||| | || |||||||||||| |||||||||| || || || ||||| |    
T  15078835 ttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaaccacgct-tccaaaaaaa 15078737  T
Q  367 cccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
      |||||||||||||||| ||||      |||||||| | || ||||||||||||||||||||||| || ||||||||||||| ||||||    
T  15078736 ttcacctaacaccaaaagtaagaggacccaattctaacaggcctaaaacaagacaacagaagaggaaaaggaaatcaaatcggagaagaa 15078647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 249 - 424
Target Start/End: Original strand, 34789870 - 34790046
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaa 348  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||||||   || | |||||||||||||| | ||||||||||||||||||  |||||    
T  34789870 atgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgagaaatatcaaa 34789969  T
Q  349 ctaccct-ctcaaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaaca 424  Q
    | ||| | || |||||||||||||||||||||||||| |||||     ||||||||||||| |||||  ||||||||    
T  34789970 ccaccatcctaaaaaaacacccacctaacaccaaaagtaagatgacccaattctaatatgcctaaaattagacaaca 34790046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 248 - 375
Target Start/End: Original strand, 39332412 - 39332540
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    |||||||||||||| |||   ||||||||||||||||||||| |||||| ||| || |||||||||||||||| | ||||||||||||||| ||||||||    
T  39332412 aatgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaa 39332511  T
Q  348 actaccctctcaaaaa-acacccacctaa 375  Q
    || ||||||||||||| ||||||||||||    
T  39332512 accaccctctcaaaaacacacccacctaa 39332540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 201 - 389
Target Start/End: Original strand, 7944481 - 7944671
Alignment:
Q  201 tgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnnt-aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgc 299  Q
    ||||||||| |||||||||||||||||| ||||||||           |||||| |||||||||||  ||||| |||||||||||||| ||||||||||     
T  7944481 tgaaaagaggtccgtaataaaataaaaatgtattttttttaaaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgccgtatatatgt 7944580  T
Q  300 gatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctc-aaaaaacacccacctaacaccaaaagcaaga 389  Q
      || | |||||||||||||| | ||||||||||||||| |||||||||| ||| || | |||||||||||||||||||||||||||||||    
T  7944581 tgtacacccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccatcccaaaaaaacacccacctaacaccaaaagcaaga 7944671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 248 - 432
Target Start/End: Complemental strand, 11290280 - 11290095
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||||   || |  ||||||||||||| | ||||||||||||||| ||||||||    
T  11290280 aatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagcaacctcaa 11290181  T
Q  348 actaccctctcaa-aaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagagga 432  Q
    || ||| || ||| |||||| |||||||| ||||||||||| |      |||||||||| || |||||||||||||||||| ||||    
T  11290180 accaccatcccaacaaaacatccacctaataccaaaagcaacaggacccaattctaataggcctaaaacaagacaacagaaaagga 11290095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 168 - 456
Target Start/End: Original strand, 34048634 - 34048923
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaaatttcc 267  Q
    |||||||||||| |||||| || ||| || ||||||||| ||| ||||||||||||||||| || |||||          |||||||||||||||  |      
T  34048634 gttcctacgaatttggaggctcggctctgtaagtgaaaatagacccgtaataaaataaaaatgttttttttaaagaac--aatgttctatttaaacattt 34048731  T
Q  268 taaaagataaatacaaggtgtcgtatatatgc--gatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaa- 364  Q
    |||||||||||||||| |||||||||||||    |||| | |||||| ||||||| | ||| ||||||||||| | ||||| || ||||||  ||||||     
T  34048732 taaaagataaatacaatgtgtcgtatatatatatgatacacccaaagatgaaaatcactactgtatacatgaggatcctcataccaccctccaaaaaaaa 34048831  T
Q  365 cacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    ||| |||||||||||||||| || || |    ||||||||| || ||  ||||||||||||||||||| || ||||||||||||||||||||    
T  34048832 cactcacctaacaccaaaagtaaaatggctcgattctaataggcctagcacaagacaacagaagaggaaaaggaaatcaaatcggggaagaa 34048923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 247 - 389
Target Start/End: Complemental strand, 8103009 - 8102868
Alignment:
Q  247 taatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctca 346  Q
    ||||||| |||||||||||  ||||||||||||||||||||  ||||||||||| || | | |||||||||||| ||||||||||||||||| |||||||    
T  8103009 taatgttatatttaaattttttaaaagataaatacaaggtgcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacctca 8102910  T
Q  347 aactaccctct--caaaaaacacccacctaacaccaaaagcaaga 389  Q
    |   |||||||   |||||||| ||||||||||||||||||||||    
T  8102909 a---accctcttaaaaaaaacatccacctaacaccaaaagcaaga 8102868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 248 - 427
Target Start/End: Original strand, 5973114 - 5973292
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||   || | ||| || ||||||| ||||||||||||| ||| ||||||||    
T  5973114 aatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtatacacgaggaacctcaa 5973213  T
Q  348 actaccctctcaaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaa 427  Q
    || ||| |   ||||||||   |||||||||||||||||||||     ||||||||||  | ||||||||||||||||||    
T  5973214 accaccat-aaaaaaaacattgacctaacaccaaaagcaagatgatccaattctaatagacctaaaacaagacaacagaa 5973292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 268 - 378
Target Start/End: Complemental strand, 5942772 - 5942661
Alignment:
Q  268 taaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaa-ca 366  Q
    ||||||||||||||||| |||||||||| |||| || | |||||||||||||| | ||||||||||||||| |||||||||| |||||| ||||||| ||    
T  5942772 taaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccctcccaaaaaagca 5942673  T
Q  367 cccacctaacac 378  Q
     |||||||||||    
T  5942672 tccacctaacac 5942661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 169 - 320
Target Start/End: Original strand, 30674330 - 30674482
Alignment:
Q  169 ttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnnt-aatgttctatttaaatttcc 267  Q
    |||||||||||||||||| || ||| || ||||||||||||   |||||||||||||||||||||||||           |||||||||||||||| |      
T  30674330 ttcctacgaatctggaggctcggctctgtaagtgaaaagaggctcgtaataaaataaaaacgtatttttttttaaagaacaatgttctatttaaatgttt 30674429  T
Q  268 taaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaat 320  Q
    ||||||||||||| |||||||||||||||||||||| |  |||||||||||||    
T  30674430 taaaagataaatataaggtgtcgtatatatgcgatacactcaaaggtgaaaat 30674482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 41879277 - 41879182
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||  |||||||||||| || |||||||||||||||| | ||||| ||||||||||||||    
T  41879277 aatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgagaaacc 41879182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 391
Target Start/End: Original strand, 14509990 - 14510133
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtg-aaaattattaccgtatacatgagaaacctca 346  Q
    ||||||| ||||||||||  ||||||| ||||| |||||||||||||||  || || | ||||| ||| ||||| | ||||||||||||||| |||||||    
T  14509990 aatgttcaatttaaattttttaaaagacaaatataaggtgtcgtatata--cggtacacccaaatgtgaaaaatcactaccgtatacatgagtaacctca 14510087  T
Q  347 aactaccctctc-aaaaaacacccacctaacaccaaaagcaagata 391  Q
    ||| ||| |||| ||||||||||||| |||||| ||||||||||||    
T  14510088 aaccaccatctcaaaaaaacacccacgtaacactaaaagcaagata 14510133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 5860751 - 5860846
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||||||||| | |||| |||||||||||||||    
T  5860751 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaaacc 5860846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 45475913 - 45475818
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||||||||| | ||||||||||||||| ||||    
T  45475913 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacc 45475818  T

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Target: chr8; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 5721654 - 5721536
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaa 348  Q
    ||||||||||||| |||  |||||||||||||||||||| | ||||||  || || | ||||| |||||||| | |||||||||| |||| |||||||||    
T  5721654 atgttctatttaatttttttaaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtatacctgaggaacctcaaa 5721555  T
Q  349 ctaccctctcaaaaaacac 367  Q
    | |||||| ||||||||||    
T  5721554 ccaccctcccaaaaaacac 5721536  T

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Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 377
Target Start/End: Original strand, 23941098 - 23941227
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    |||||| |||||||||||  |||||||||||||||||||||| |||||| |||||| | |||||| ||||||| |  | | |||| | ||| ||||||||    
T  23941098 aatgttttatttaaattttttaaaagataaatacaaggtgtcatatataagcgatacacccaaagatgaaaatcacaatcatatatacgaggaacctcaa 23941197  T
Q  348 actaccctctcaaaaaacacccacctaaca 377  Q
    || |||||| |||||||  |||||||||||    
T  23941198 accaccctcccaaaaaaaccccacctaaca 23941227  T

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Target: chr8; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 247 - 355
Target Start/End: Original strand, 25561501 - 25561607
Alignment:
Q  247 taatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctca 346  Q
    ||||||||||||||||| |  |||| ||||||||||||||| ||||||||||||||| | ||||| |||||||| | | ||||||||||||| |||||||    
T  25561501 taatgttctatttaaatcttttaaa-gataaatacaaggtgccgtatatatgcgata-acccaaatgtgaaaatcactgccgtatacatgaggaacctca 25561598  T
Q  347 aactaccct 355  Q
    ||| |||||    
T  25561599 aaccaccct 25561607  T

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Target: chr8; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 23606636 - 23606731
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||| |||||||||||| || | |||||||| ||||| | ||||||||||||||| ||||    
T  23606636 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaggaacc 23606731  T

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Target: chr8; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 23798268 - 23798363
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||| |||||||||||| || | ||||| |||||||| | ||||||||||||||| ||||    
T  23798268 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacc 23798363  T

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Target: chr8; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 30883425 - 30883330
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||| ||| |||||||||||| || | ||| |||||||||| | ||||||||||||||| ||||    
T  30883425 aatgttctatttatattttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 30883330  T

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Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 449
Target Start/End: Original strand, 38009205 - 38009345
Alignment:
Q  307 ccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaacacccacctaacaccaaaagcaagatagggtaattctaatat 406  Q
    |||||||||||||||| |||| ||||||||||||| ||||||| |||||   |||||||| |  ||||||||||||||||| | |    | ||||||||     
T  38009205 ccaaaggtgaaaattactaccatatacatgagaaa-ctcaaaccaccct-aaaaaaaacatctgcctaacaccaaaagcaaaagaactcagttctaatag 38009302  T
Q  407 gcttaaaacaagacaacagaagaggagaaagaaatcaaatcgg 449  Q
    || ||||||||||||||||||||||| || ||||| |||||||    
T  38009303 gcctaaaacaagacaacagaagaggaaaaggaaattaaatcgg 38009345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 2952228 - 2952323
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||| ||| |||||||||||| || | ||| || ||||||| | ||||||||||||||| ||||    
T  2952228 aatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 2952323  T

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Target: chr8; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 10917487 - 10917392
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||| |||||||| ||||  ||||||||||||| |||||| |||||||||||| || | |||||||||||||| | |||| |||||||||| ||||    
T  10917487 aatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgaggaacc 10917392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 13534694 - 13534788
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||||||| || |||||||||||| || | ||| |||||||||| | ||||||||||||||| ||||    
T  13534694 aatgttctatttatattttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 13534788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 13624234 - 13624328
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||||||| || |||||||||||| || | ||| |||||||||| | ||||||||||||||| ||||    
T  13624234 aatgttctatttatattttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 13624328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 42600878 - 42600783
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||| |||||||| ||||  ||||||||||||| |||||| |||||||||| | || | |||||||||||||| | ||||||||||||||| ||||    
T  42600878 aatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 42600783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 343
Target Start/End: Original strand, 37430166 - 37430260
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | | | |||| ||||| | ||||||||||||||| ||||    
T  37430166 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgaggaacc 37430260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 198 - 287
Target Start/End: Original strand, 34868132 - 34868223
Alignment:
Q  198 aagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnn--taatgttctatttaaatttcctaaaagataaatacaaggtg 287  Q
    ||||||||||||| || |||||||||||||||||||||||           |||||||||||||||||||  ||||||||||||||||||||    
T  34868132 aagtgaaaagagacccataataaaataaaaacgtattttttttttaaagaataatgttctatttaaattttttaaaagataaatacaaggtg 34868223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 254 - 343
Target Start/End: Original strand, 3048530 - 3048619
Alignment:
Q  254 ctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||| ||||  |||||||||||||||||||| |||||||||||| || | | | || ||||||| | ||||||||||| ||| ||||    
T  3048530 ctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtatacacgaggaacc 3048619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 286
Target Start/End: Complemental strand, 9108589 - 9108551
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggt 286  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  9108589 aatgttctatttaaattttttaaaagataaatacaaggt 9108551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 14509906 - 14509966
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaa 228  Q
    |||||||||||| ||||| ||| | | |||||||||||| ||  |||||||||||||||||    
T  14509906 gttcctacgaatttggagattcggttctgcaagtgaaaataggcccgtaataaaataaaaa 14509966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 6e-54; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 168 - 456
Target Start/End: Complemental strand, 23859250 - 23858960
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttt-tnnnnnnnnntaatgttctatttaaatttc 266  Q
    |||||||||||| |||||| ||  || || ||||||||||||| | ||||||||||||||||||||||| |         |||||||||||||||||||     
T  23859250 gttcctacgaatttggaggctcgactctgtaagtgaaaagagacctgtaataaaataaaaacgtattttgtttaagagaataatgttctatttaaatttt 23859151  T
Q  267 ctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctc-aaaaaac 365  Q
     |||||||||||||||| ||  ||||||||||||||| | |||||| ||||||||| ||||||||||||||| | |||||||| |||||| | |||||||    
T  23859150 ttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgaggatcctcaaaccaccctcccaaaaaaac 23859051  T
Q  366 acccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    ||||||||||||||||| ||||||      |||||||||| || |||||||||| ||| |||||||| || |||||||||| |||||||||    
T  23859050 acccacctaacaccaaatgcaagaggacccaattctaataggcctaaaacaagataacggaagaggaaaatgaaatcaaattggggaagaa 23858960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 248 - 456
Target Start/End: Original strand, 27237429 - 27237638
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||||||||||||||  ||||||||||||||||||||| ||||||||| |||  ||| |||||||||||| | || |||||||||||| ||||||||    
T  27237429 aatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgaggaacctcaa 27237528  T
Q  348 actaccctctc-aaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaat 446  Q
    || |||||| | ||||||||| |||||||||||| |||||||||     |||||||||| || ||||||||||||||| ||||| | || ||||||||||    
T  27237529 accaccctcccaaaaaaacactcacctaacaccataagcaagatgacccaattctaataggcctaaaacaagacaacaaaagagaaaaaggaaatcaaat 27237628  T
Q  447 cggggaagaa 456  Q
    ||||||||||    
T  27237629 cggggaagaa 27237638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 248 - 452
Target Start/End: Complemental strand, 7398547 - 7398342
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||||||||||||||  | |||||||||||||||||| | |||||||| |||| | | |||||||||||| | |||| |||||||||| ||||||||    
T  7398547 aatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgaggaacctcaa 7398448  T
Q  348 actaccctctc-aaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaat 446  Q
    || |||||| | |||||||| |||| |||||||||||||||||      |||||||||| || ||||||||||||||| ||||| | || ||||||||||    
T  7398447 accaccctcccaaaaaaacatccacgtaacaccaaaagcaagaggacccaattctaataggcctaaaacaagacaacaaaagagcaaaaggaaatcaaat 7398348  T
Q  447 cgggga 452  Q
    ||||||    
T  7398347 cgggga 7398342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 162 - 456
Target Start/End: Original strand, 23020404 - 23020697
Alignment:
Q  162 agggctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnnt-aatgttctattta 260  Q
    ||||| |||||||||||||||||||  | | | || |||||||||||| |||||||||||||||||| ||||||||           || |||  |||||    
T  23020404 agggccgttcctacgaatctggaggc-cggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtattttttttaaaagaacaacgtttcattta 23020502  T
Q  261 aatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaa 360  Q
     ||||  ||||||||||||| ||||||| |||||||||| | | |  ||||||||||||| | ||||||||||||||| ||| |||||  | ||||||||    
T  23020503 gattttttaaaagataaatataaggtgttgtatatatgc-acacactcaaaggtgaaaatcactaccgtatacatgaggaacttcaaatcatcctctcaa 23020601  T
Q  361 aaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    |||||||| ||||||||||||||| || ||     |||||||||| |  ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  23020602 aaaacacctacctaacaccaaaagtaatatgacccaattctaataggtctaaaacaagacaacaaaagaggaaaaagaaatcaaatcggggaagaa 23020697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 247 - 456
Target Start/End: Complemental strand, 20153298 - 20153090
Alignment:
Q  247 taatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctca 346  Q
    ||||||| |||||||||||  |||||||||||||||| |||| |||||||||||||| | |||||| ||||||| | | |||||||||||||  | ||||    
T  20153298 taatgttttatttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatgagggatctca 20153199  T
Q  347 aactaccctctcaaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaat 446  Q
    ||| ||||| | |||||||| |||||||||| |||||||||       ||||||||||| || ||||||||||||||| | ||| | |||||||||||||    
T  20153198 aaccaccct-taaaaaaacatccacctaacatcaaaagcaatgggacttaattctaataggcctaaaacaagacaacatatgagaaaaaagaaatcaaat 20153100  T
Q  447 cggggaagaa 456  Q
    ||||||||||    
T  20153099 cggggaagaa 20153090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 162 - 456
Target Start/End: Original strand, 12419414 - 12419712
Alignment:
Q  162 agggctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnnt-aatgttctattta 260  Q
    ||||| ||||||| ||||| ||||| || |||||| ||||||||||||  |||||||||||||| |||||||||||           |||||||||||||    
T  12419414 agggccgttcctatgaatccggaggctcggctttgtaagtgaaaagaggcccgtaataaaataacaacgtattttttttaaaagaacaatgttctattta 12419513  T
Q  261 aatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctc-a 359  Q
    |||||  |||||||||||||||| ||  | ||||| || |||| |||||||| ||||||| | ||  | ||||||||| |||||||||| |||||| | |    
T  12419514 aattttttaaaagataaatacaatgtaccttatatgtgtgatacatccaaagatgaaaatcactattgaatacatgaggaacctcaaaccaccctcccaa 12419613  T
Q  360 aaaaacacccacctaacaccaaaagcaagatagggtaattc--taatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    ||||| || |||||||||||||||||||||      |||||  ||||| || |||||||||||||| || ||||| || ||||||||||||| ||||||    
T  12419614 aaaaatacacacctaacaccaaaagcaagaggacccaattctataataggcctaaaacaagacaactgacgaggaaaaggaaatcaaatcggagaagaa 12419712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 198 - 389
Target Start/End: Original strand, 9021757 - 9021947
Alignment:
Q  198 aagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatat 297  Q
    |||||||||||||  ||||||||||||||| |||||||||          ||| | ||||||||||||  |||||||||||||||| ||| |||||||||    
T  9021757 aagtgaaaagagacacgtaataaaataaaagcgtatttttttaaagaac-aatttgctatttaaattttttaaaagataaatacaatgtgccgtatatat 9021855  T
Q  298 gcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctc-aaaaaacacccacctaacaccaaaagcaaga 389  Q
    ||| || | |||||||||||||| | |||||||||||||||  ||||||||| |||||| | |||||||| ||||||||||||||||||||||    
T  9021856 gcggtacacccaaaggtgaaaatcactaccgtatacatgag-gacctcaaaccaccctcccaaaaaaacatccacctaacaccaaaagcaaga 9021947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 248 - 378
Target Start/End: Original strand, 6765687 - 6765818
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| ||  || |||||||||||||||| | ||||||||| | ||| ||||||||    
T  6765687 aatgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtatataagagtaacctcaa 6765786  T
Q  348 actaccctctcaaaaa-acacccacctaacac 378  Q
    || |||||  |||||| |||||||||||||||    
T  6765787 accacccttccaaaaacacacccacctaacac 6765818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 248 - 388
Target Start/End: Original strand, 2611268 - 2611409
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||| || |  ||| ||||||||| |  || ||||||||||| ||||||||    
T  2611268 aatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgaggaacctcaa 2611367  T
Q  348 actaccctctca-aaaaacacccacctaacaccaaaagcaag 388  Q
    || | |||| || ||||||||||||||||||| |||| ||||    
T  2611368 acgatcctcccagaaaaacacccacctaacactaaaaacaag 2611409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 255 - 389
Target Start/End: Original strand, 9014782 - 9014910
Alignment:
Q  255 tatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccc 354  Q
    |||||||||||  |||||||||||||||| ||||||||||||| |       |||||||||||||| | ||||||||||||||| |||||||||  ||||    
T  9014782 tatttaaattttgtaaaagataaatacaatgtgtcgtatatatac-------ccaaaggtgaaaatcactaccgtatacatgagtaacctcaaatcaccc 9014874  T
Q  355 tctc-aaaaaacacccacctaacaccaaaagcaaga 389  Q
    || | |||||||||||||||||||||||||||||||    
T  9014875 tcccaaaaaaacacccacctaacaccaaaagcaaga 9014910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 162 - 389
Target Start/End: Complemental strand, 18201318 - 18201092
Alignment:
Q  162 agggctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaa 261  Q
    ||||| ||||| ||||||| ||||| || ||| ||||||||||| ||  ||||||||||||||||||  |||||||          |||| |||||||||    
T  18201318 agggccgttcccacgaatccggaggctcggctctgcaagtgaaa-gatgtccgtaataaaataaaaatatatttttttaaacgaacaatgatctatttaa 18201220  T
Q  262 atttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaa 361  Q
    ||||  ||||| ||||||||||| || | |||||||| | || | | || |||||||||  ||||| || ||||||| |||||||||| ||||||  |||    
T  18201219 attttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaatcgttaccttacacatgaggaacctcaaaccaccctcctaaa 18201120  T
Q  362 aaacacccacctaacaccaaaagcaaga 389  Q
    |||||| |||||||||| ||||||||||    
T  18201119 aaacactcacctaacacaaaaagcaaga 18201092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 351 - 455
Target Start/End: Original strand, 26917792 - 26917896
Alignment:
Q  351 accctctcaaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggg 450  Q
    |||||| |||||||||| |||||||||||||||||||||      |||||||||| || ||||||||||||||||||||||| || ||||||||||||||    
T  26917792 accctcccaaaaaacactcacctaacaccaaaagcaagaagacccaattctaataagcctaaaacaagacaacagaagaggaaaatgaaatcaaatcggg 26917891  T
Q  451 gaaga 455  Q
    |||||    
T  26917892 gaaga 26917896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 18776772 - 18776867
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| | |||||||| | ||||||||||||||||||||    
T  18776772 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgagaaacc 18776867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 320
Target Start/End: Original strand, 21763508 - 21763665
Alignment:
Q  162 agggctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaa 261  Q
    ||||| |||||||| |||||||||| || | | |  |||| |||||||||||||||||||||||||||||||||||          | ||||||||||||    
T  21763508 agggccgttcctacaaatctggaggctctgttctataagtaaaaagagatccgtaataaaataaaaacgtatttttttaaagaac-attgttctatttaa 21763606  T
Q  262 atttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaat 320  Q
    ||||  |||||||||||||||| || |||||||||||||||| | | ||| ||||||||    
T  21763607 attttttaaaagataaatacaaagtatcgtatatatgcgatacaccaaaaagtgaaaat 21763665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 23551097 - 23551172
Alignment:
Q  268 taaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||||||||||||||||| || |||||||||||||||| | ||||||||||||||| ||||    
T  23551097 taaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacc 23551172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 29077316 - 29077221
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||||||||||| || | | | |||||||||| | ||||||||||||||| ||||    
T  29077316 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgaggaacc 29077221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 247 - 362
Target Start/End: Complemental strand, 36891675 - 36891560
Alignment:
Q  247 taatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctca 346  Q
    |||||||||||||| ||||  |||| ||| ||||||| |||| |||||||| || || |||||||||||||||| | ||||||||||||||| |||||||    
T  36891675 taatgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacctca 36891576  T
Q  347 aactaccctctcaaaa 362  Q
    ||| | |||| |||||    
T  36891575 aaccatcctcccaaaa 36891560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 48983850 - 48983945
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||| |||||||| ||||  ||||||||||||| ||||||||||||||||||| || | |||||||||||||| | ||||||||||||||| ||||    
T  48983850 aatgatctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgaggaacc 48983945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 8171545 - 8171640
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| || ||||||| | ||||||||||||||| ||||    
T  8171545 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 8171640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 10329416 - 10329511
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||| |||||||||| |  | | |||||||||||||| | ||||||||||||||||||||    
T  10329416 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgagaaacc 10329511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 20091287 - 20091382
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||| |||||||| ||||  ||||||||||||| |||||| |||||||||||| || | |||||||||||||| | ||||||||||||||| ||||    
T  20091287 aatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 20091382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 168 - 378
Target Start/End: Complemental strand, 12981501 - 12981294
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaaatttcc 267  Q
    ||||||||||||| |||||||| | | || | ||||||||||   |||||||||||||||| || |||||          |||||||||||||| |||      
T  12981501 gttcctacgaatccggaggttcggttctgtaggtgaaaagaggctcgtaataaaataaaaatgt-tttttataaaagaagaatgttctatttaatttttt 12981403  T
Q  268 taaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaacac 367  Q
    |||||||||||||||||||  | |||||| ||| || |  ||||||||||||| | ||| ||||| ||||| |||||||||| ||||| ||  || ||||    
T  12981402 taaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgaggaacctcaaaccaccctttc--aacacac 12981305  T
Q  368 ccacctaacac 378  Q
    |||||||||||    
T  12981304 ccacctaacac 12981294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 298
Target Start/End: Complemental strand, 38971425 - 38971299
Alignment:
Q  172 ctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnnt-aatgttctatttaaatttcctaa 270  Q
    |||||||||| |||  || |||||| ||||||||||||| ||||||||||||||||| ||||||||         | ||| || |||||||||||  |||    
T  38971425 ctacgaatctagagactcggctttgtaagtgaaaagagacccgtaataaaataaaaatgtattttttttaaaagatcaatattttatttaaattt-ttaa 38971327  T
Q  271 aagataaatacaaggtgtcgtatatatg 298  Q
    ||||||||||||||||||||||||||||    
T  38971326 aagataaatacaaggtgtcgtatatatg 38971299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 278 - 432
Target Start/End: Original strand, 17800257 - 17800412
Alignment:
Q  278 atacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaa-aaaacacccacctaac 376  Q
    ||||||| |||||||||||||   || | ||||| |||||||| | |||||||| |||||| ||  |||||| ||| || ||| |||||| |||||||||    
T  17800257 atacaagttgtcgtatatatgttgtacacccaaaagtgaaaatcactaccgtatgcatgaggaatttcaaaccaccatcccaagaaaacatccacctaac 17800356  T
Q  377 accaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagagga 432  Q
    |||||||||||||      |||||||||| || |||||||||||||||||| ||||    
T  17800357 accaaaagcaagaggacccaattctaataggcctaaaacaagacaacagaaaagga 17800412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 24525691 - 24525786
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||| ||| |||||||| || | ||||| |||||||| | ||||||||||||||| ||||    
T  24525691 aatgttctatttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacc 24525786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 10955579 - 10955485
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| ||||  ||||||||||||| |||||| |||||||||||| || |  || |||||||||| | ||||||||||||||| ||||    
T  10955579 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaggaacc 10955485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 162 - 300
Target Start/End: Complemental strand, 23744979 - 23744840
Alignment:
Q  162 agggctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgta-tttttnnnnnnnnntaatgttctattta 260  Q
    ||||| |||||||||||| |||||| |||||| |  ||||||||||||  |||||| |||||||||| ||| |||||          ||||||||| |||    
T  23744979 agggccgttcctacgaatttggaggctcagctctataagtgaaaagaggcccgtaaaaaaataaaaatgtatttttttaaaaagaacaatgttctaatta 23744880  T
Q  261 aatttcctaaaagataaatacaaggtgtcgtatatatgcg 300  Q
    |||||  |||||||||||||||||||| || |||||||||    
T  23744879 aattttttaaaagataaatacaaggtgccgcatatatgcg 23744840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 26254089 - 26254017
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaat 320  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | |||||| |||||||    
T  26254089 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaagatgaaaat 26254017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 249 - 343
Target Start/End: Original strand, 12596294 - 12596388
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| ||||  | |||||||||||||||||| |||||||||| | || | ||| |||||||||| | |||||||| |||||| ||||    
T  12596294 atgttctatttatatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgaggaacc 12596388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 248 - 338
Target Start/End: Original strand, 36902930 - 36903020
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgag 338  Q
    ||||||||||||||||||  ||| ||||||||||||| |||||||||||||   || | | |||||||||||| | ||| |||||||||||    
T  36902930 aatgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtgaaaatcagtactgtatacatgag 36903020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 343
Target Start/End: Complemental strand, 8239784 - 8239688
Alignment:
Q  247 taatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||||| ||||  ||||| ||||||| || ||| |||||||||| | || | ||||| |||||||| ||||||||||| ||||| ||||    
T  8239784 taatgttctatttatattttttaaaaaataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgaggaacc 8239688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 9014134 - 9014233
Alignment:
Q  198 aagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatat 297  Q
    ||||||||||||  |||||||||||||||| |||||||||          |||||| |||||||||||  |||||||||||||||| |||| ||||||||    
T  9014134 aagtgaaaagaggcccgtaataaaataaaaccgtattttttttaaagaacaatgttttatttaaattttttaaaagataaatacaatgtgttgtatatat 9014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 320
Target Start/End: Original strand, 33162345 - 33162417
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaat 320  Q
    |||| |||||||| ||||  |||||||||||||||||||| |||||||||||| || | | ||||||||||||    
T  33162345 aatgctctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaat 33162417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 343
Target Start/End: Original strand, 38414885 - 38414977
Alignment:
Q  251 gttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||  ||||  ||||||||||||| |||||| |||||||||| | || | |||||||||||||| | ||| ||||||||||| ||||    
T  38414885 gttctatttgtattttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgaggaacc 38414977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 47984975 - 47985071
Alignment:
Q  248 aatgttctatttaaatttcct-aaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  | |||||| ||||| |||||| |||||||||||| || | |||||||||||||| |  |||||||||||||| ||||    
T  47984975 aatgttctatttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatgaggaacc 47985071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 19692190 - 19692095
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||| | |||||||||| || | | |||||||||||| | |  |||||||||||| ||||    
T  19692190 aatgttctatttatattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgaggaacc 19692095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 28749801 - 28749716
Alignment:
Q  252 ttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgag 338  Q
    ||||||||| ||||   ||||||||||||||||||| |||||||||||| || |  || | ||||||| || |||||||||||||||    
T  28749801 ttctatttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaa-tactaccgtatacatgag 28749716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 5e-45; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 248 - 456
Target Start/End: Original strand, 14318389 - 14318597
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||| |||| |||||||  ||||||| | ||||||||||||||| ||||||||    
T  14318389 aatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgaggaacctcaa 14318488  T
Q  348 actaccctctcaaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatc 447  Q
    || ||||||  ||||||||||||||||| |||||||||||||      | || ||||| || |||||||| || ||| ||||||| || |||||||||||    
T  14318489 accaccctccaaaaaaacacccacctaagaccaaaagcaagaggacccagttttaataggcctaaaacaaaactacaaaagaggaaaaggaaatcaaatc 14318588  T
Q  448 ggggaagaa 456  Q
    || ||||||    
T  14318589 ggagaagaa 14318597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 248 - 456
Target Start/End: Complemental strand, 34425999 - 34425790
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    |||||||||||| |||||  |||||||||||||||||||| |||||||||| |||| | | |||| | ||||| ||||||||||||||||| ||||||||    
T  34425999 aatgttctatttcaattttttaaaagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgaggaacctcaa 34425900  T
Q  348 actaccctctc-aaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaat 446  Q
    || |||||| | ||||||||| |||||||||||||||||||||      |||||||||| || ||||||||||||||||||| | | || ||||||||||    
T  34425899 accaccctcccaaaaaaacactcacctaacaccaaaagcaagaggactcaattctaataggcctaaaacaagacaacagaagggaaaaaggaaatcaaat 34425800  T
Q  447 cggggaagaa 456  Q
    ||||| ||||    
T  34425799 cggggcagaa 34425790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 248 - 456
Target Start/End: Original strand, 2024646 - 2024853
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||||||||||||||  | |||||||||||||| ||| |||||||||| |||| | |||||| ||||||| | |||| |||||||||| | ||||||    
T  2024646 aatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacacccaaagatgaaaatcactaccatatacatgaggatcctcaa 2024745  T
Q  348 actaccctctcaaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatc 447  Q
    || | |||| ||||||| || |||||||||||||||||||||      ||||||||||||| ||||||||||||||| ||||||| || |||||||||||    
T  2024746 accatcctcccaaaaaa-acacacctaacaccaaaagcaagaggactcaattctaatatgcctaaaacaagacaacataagaggaaaaggaaatcaaatc 2024844  T
Q  448 ggggaagaa 456  Q
    |||||||||    
T  2024845 ggggaagaa 2024853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 198 - 456
Target Start/End: Complemental strand, 10543819 - 10543569
Alignment:
Q  198 aagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatat 297  Q
    ||||||||||||||||||||||||||||||| ||||||||         |||||||| | ||||||||  ||||||||||||| ||||||  ||||||||    
T  10543819 aagtgaaaagagatccgtaataaaataaaaatgtattttttttaaagaataatgttccacttaaattttttaaaagataaatataaggtgatgtatatat 10543720  T
Q  298 gcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaacacccacctaacaccaaaagcaagatagggtaa 397  Q
    |||||| |||||||||||||||| | |||||||||||| || || ||||||| |||||| |||||||||| |||| ||||||||||||    |  |   |    
T  10543719 gcgatacatccaaaggtgaaaatcactaccgtatacat-aggaatctcaaaccaccctcccaaaaaacactcacccaacaccaaaagc----tccg---a 10543628  T
Q  398 ttctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    |||||||| || ||||| ||||||||| ||||||| || |||||||||||||| |||||    
T  10543627 ttctaataggcctaaaataagacaacataagaggaaaaggaaatcaaatcgggaaagaa 10543569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 168 - 456
Target Start/End: Original strand, 11242242 - 11242531
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaaatttcc 267  Q
    ||||||| ||||| ||||| || ||| || |||||||||||||  |||||||||||||||||||||| ||          |||||||||||||| |||      
T  11242242 gttcctatgaatccggaggctcggctctgtaagtgaaaagagactcgtaataaaataaaaacgtattcttttaaaagaacaatgttctatttaatttttt 11242341  T
Q  268 taaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctc-aaaaaaca 366  Q
    ||||||||||||||||  ||  ||||||||| |||| | |||||| || |||| | ||||||||||||||| |||||||||| |||||| | ||||||||    
T  11242342 taaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgaggaacctcaaaccaccctcccaaaaaaaca 11242441  T
Q  367 cccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    |||  ||||||||||||||||||      |||||||||| || |||||||| |||| ||||||||| || |||||| |||||||||||||    
T  11242442 cccctctaacaccaaaagcaagaggacccaattctaataggcataaaacaaaacaagagaagaggaaaaggaaatcgaatcggggaagaa 11242531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 248 - 456
Target Start/End: Complemental strand, 2412184 - 2411976
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||  ||||||| |||||||| | ||| ||||||||||| ||||||||    
T  2412184 aatgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgaggaacctcaa 2412085  T
Q  348 actaccctctcaaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatc 447  Q
    || |||||| | |||||    | |||||||||||||| ||||  |   |||||||||| || ||||||||||||||| ||||||| || ||||||||||     
T  2412084 accaccctccctaaaaaacgtcgcctaacaccaaaagtaagagtgctcaattctaataggcctaaaacaagacaacataagaggaaaaggaaatcaaatt 2411985  T
Q  448 ggggaagaa 456  Q
    |||||||||    
T  2411984 ggggaagaa 2411976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 168 - 456
Target Start/End: Complemental strand, 24395915 - 24395625
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaaatttcc 267  Q
    ||||||||||||| |||||| | ||| || || | |||||| | ||||||||||||||||| ||||||||         |||||||||||||||||||      
T  24395915 gttcctacgaatccggaggtacggctctgtaaataaaaagaaacccgtaataaaataaaaatgtattttttttaaaaaataatgttctatttaaattttt 24395816  T
Q  268 taaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaacac 367  Q
    ||||||||||||||||||||| |||||||| | ||| |||||||||||||||| |  |||||||| ||||| ||| | |||| ||||||| |||||| ||    
T  24395815 taaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgaggaactttaaaccaccctctaaaaaaaaac 24395716  T
Q  368 --ccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
      ||| ||||   ||||||||||||     |||||||||| |  ||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  24395715 atccatctaatgtcaaaagcaagatgactcaattctaataggtataaaacaaggcaacataagaggaaaaggaaatcaaatcggggaagaa 24395625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 170 - 362
Target Start/End: Original strand, 2530823 - 2531015
Alignment:
Q  170 tcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnntaatgttctatttaaatttccta 269  Q
    ||||||||||||| |||||  ||| || ||||||||||||  ||||||||||||||||| ||||||||          |||||||||||||| |||  ||    
T  2530823 tcctacgaatctgaaggtttggctctgtaagtgaaaagaggcccgtaataaaataaaaatgtatttttcttaaaagaaaatgttctatttaagtttttta 2530922  T
Q  270 aaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaa 362  Q
    |||||||||||||| ||||||||||||| || || |||||||||||||||| | ||| ||||||||||| |||||||||| ||||||||||||    
T  2530923 aaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacctcaaaccaccctctcaaaa 2531015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 248 - 456
Target Start/End: Original strand, 40794331 - 40794538
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    |||||| |||||||||||  ||||||| |||||||| | | |||| ||||  |||| | | |||||||||||| | ||||||||||||||||||||||||    
T  40794331 aatgttttatttaaattttttaaaagacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatgagaaacctcaa 40794430  T
Q  348 actaccctctcaaaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatc 447  Q
    || |||||   |||||||| | ||||||||||||||| ||||      |||||||||| || ||||||||||||||| ||||||| ||||||||||||||    
T  40794431 accaccct-aaaaaaaacatcaacctaacaccaaaagtaagaggacccaattctaataagcctaaaacaagacaacaaaagaggaaaaagaaatcaaatc 40794529  T
Q  448 ggggaagaa 456  Q
     ||||||||    
T  40794530 cgggaagaa 40794538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 248 - 389
Target Start/End: Original strand, 22648740 - 22648881
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||||| |  | |||||||||||| ||| | ||| ||||| || |||||||||||    
T  22648740 aatgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatgtggcacatccaaaggtgacaatcactactgtataaataagaaacctcaa 22648839  T
Q  348 actaccctctcaaaaaacacccacctaacaccaaaagcaaga 389  Q
    || ||| ||  |||||||| ||||||||||||||||||||||    
T  22648840 accaccttccaaaaaaacatccacctaacaccaaaagcaaga 22648881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 248 - 456
Target Start/End: Original strand, 1366530 - 1366739
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||||||||||||||  || |||||||||||||| ||| |||||||||||||| | | ||| |||||||| | ||||||||| ||||| |||||||     
T  1366530 aatgttctatttaaattttttataagataaatacaagatgtggtatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgaggaacctcat 1366629  T
Q  348 actaccctctc-aaaaaacacccacctaacaccaaaagc-aagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaa 445  Q
    || |||||| | |||||||| |||||||||||| || || ||||   |  ||||| |||| || ||||||||||||||| ||||||| || |||||||||    
T  1366630 accaccctcccaaaaaaacatccacctaacaccgaatgctaagaggtgtcaattccaataggcgtaaaacaagacaaca-aagaggaaaaggaaatcaaa 1366728  T
Q  446 tcggggaagaa 456  Q
    | |||||||||    
T  1366729 ttggggaagaa 1366739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 162 - 338
Target Start/End: Original strand, 26718866 - 26719043
Alignment:
Q  162 agggctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnn-taatgttctattta 260  Q
    ||||| ||||||| ||||| ||||| || | | || ||||||||||||| ||||||||||||||||||||||||||          ||||||||||||||    
T  26718866 agggccgttcctatgaatccggaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaacgtatttttttttaaagaataatgttctattta 26718965  T
Q  261 aatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgag 338  Q
    || ||  |||||||||||||||| ||||||||||||||||||| |  ||||||||||||| | ||||| |||||||||    
T  26718966 aaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgag 26719043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 162 - 338
Target Start/End: Original strand, 26988610 - 26988787
Alignment:
Q  162 agggctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnn-taatgttctattta 260  Q
    ||||| ||||||| ||||| ||||| || | | || ||||||||||||| ||||||||||||||||||||||||||          ||||||||||||||    
T  26988610 agggccgttcctatgaatccggaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaacgtatttttttttaaagaataatgttctattta 26988709  T
Q  261 aatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgag 338  Q
    || ||  |||||||||||||||| ||||||||||||||||||| |  ||||||||||||| | ||||| |||||||||    
T  26988710 aaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgag 26988787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 248 - 385
Target Start/End: Original strand, 36868880 - 36869018
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||||||| | || | ||||| |||||||| | ||||||||||||||| || |||||    
T  36868880 aatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgaggaatctcaa 36868979  T
Q  348 actaccct-ctcaaaaaacacccacctaacaccaaaagc 385  Q
    || ||||| | ||||||||| |||||||| |||||||||    
T  36868980 accaccctccccaaaaaacatccacctaataccaaaagc 36869018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 248 - 389
Target Start/End: Complemental strand, 33037876 - 33037733
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    |||||| |||||||||||  ||||||||||||||||| | |||||||||||   || | |||||||||||||  ||||||||||||||||| ||||||||    
T  33037876 aatgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgaggaacctcaa 33037777  T
Q  348 actaccctc--tcaaaaaacacccacctaacaccaaaagcaaga 389  Q
    || ||| ||    |||||||||| ||||||||||||||||||||    
T  33037776 accaccatccaaaaaaaaacacctacctaacaccaaaagcaaga 33037733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 16198798 - 16198893
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||||||||||||||||||| | |||||||||||||| | ||||||||||||||| ||||    
T  16198798 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacc 16198893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 38869367 - 38869462
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| ||||||||||||||||||| || | |||||||||||||| | ||||||||||||||||||||    
T  38869367 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 38869462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 168 - 432
Target Start/End: Complemental strand, 10407638 - 10407369
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnnt-aatgttctatttaaatttc 266  Q
    |||||||||||||| ||||||| | | |  |||||||||||| ||| |||||||||||||| ||||||||           ||||||||||||||||||     
T  10407638 gttcctacgaatctagaggttcggttctataagtgaaaagaggtccataataaaataaaaaagtattttttttaaaagaacaatgttctatttaaatttt 10407539  T
Q  267 ctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctc-aaaaaac 365  Q
     ||||||||||| ||||||||||||| |||||   || ||| ||| |||||||||| |||||||| |||||| || ||| ||| ||| || | |||||||    
T  10407538 ttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatgaggaatctccaaccaccatcccaaaaaaac 10407439  T
Q  366 acccacctaacaccaaa---agcaagatagggtaattctaatatgcttaaaacaagacaacagaagagga 432  Q
    |  || |||||||||||   |||||||      |||||||||| || |||||||||||||||||| ||||    
T  10407438 attcatctaacaccaaaaggagcaagaggacccaattctaataggcctaaaacaagacaacagaaaagga 10407369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 15639717 - 15639600
Alignment:
Q  270 aaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaacaccc 369  Q
    |||||||||||||||||| ||||||||||||||| |||||||| ||||||| | |  ||||||||| || ||||| ||||  | |||| ||||||||| |    
T  15639717 aaagataaatacaaggtgacgtatatatgcgatacatccaaagatgaaaatcactgtcgtatacataaggaaccttaaac--cactctaaaaaaacactc 15639620  T
Q  370 acctaacaccaaaagcaaga 389  Q
    ||||||||||||||| ||||    
T  15639619 acctaacaccaaaagtaaga 15639600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 249 - 345
Target Start/End: Original strand, 36187884 - 36187980
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctc 345  Q
    |||||||||||| ||||  ||||| |||||||||||||| |||||||||||| || | ||| |||||||||| | ||||||||||||||||||||||    
T  36187884 atgttctatttatattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagaaacctc 36187980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 9364387 - 9364292
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| |||||| |||||||||||| || | |||||||||||||| | ||||||||||||||| ||||    
T  9364387 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 9364292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 16592078 - 16592173
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| |||| |||||||||||||||| ||||||||||||||||| || | ||| |||||||||| | ||||||||| ||||| ||||    
T  16592078 aatgttctatttatattttctaaaagataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgaggaacc 16592173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 16799331 - 16799426
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||| ||||||| |||||| |||||||||||| || | |||||||||||||| ||||||||||||||||| ||||    
T  16799331 aatgttctatttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacc 16799426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 34756370 - 34756465
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||||||||| | ||||||||||||||| ||||    
T  34756370 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 34756465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 331
Target Start/End: Original strand, 40389540 - 40389623
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtat 331  Q
    ||||||||||||| ||||  ||||||||||||| ||||||||||||||||||| || |||||||||||||||| | ||||||||    
T  40389540 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtat 40389623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 337
Target Start/End: Original strand, 28822346 - 28822435
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatga 337  Q
    ||||||||||||| ||||  ||||||||||||| |||||| |||||||||||| || | |||||||||||||| | ||||||||||||||    
T  28822346 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatga 28822435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 22986562 - 22986657
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||| | ||||  ||||||| |||||||| |||||||||||||||| || | ||| |||||||||| | ||||||||||||||||||||    
T  22986562 aatgttctattaatattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagaaacc 22986657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 27079107 - 27079012
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | | |||||||||||| | ||| ||||||||||| ||||    
T  27079107 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgaggaacc 27079012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 343
Target Start/End: Original strand, 15480094 - 15480188
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| ||||  ||||||||||||||||| ||||||||||||||| || | ||| |||||||||| | |||||||| |||||| ||||    
T  15480094 atgttctatttatattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgaggaacc 15480188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 338
Target Start/End: Original strand, 31194616 - 31194705
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgag 338  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| ||||||||| || |||||||||||||||    
T  31194616 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaa-tactaccgtatacatgag 31194705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 250 - 343
Target Start/End: Complemental strand, 19523293 - 19523200
Alignment:
Q  250 tgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||| ||||  |||||||||||||||||||| |||||||||||| || | ||| |||||||||| | |||| |||||||||| ||||    
T  19523293 tgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgaggaacc 19523200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 7338095 - 7338023
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaat 320  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||||||||||| || | | ||||||||||||    
T  7338095 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaat 7338023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 27924172 - 27924088
Alignment:
Q  254 ctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgag 338  Q
    ||||||| ||||  ||||||||||||| |||||| |||||||||||| || |||||||||| ||||| | |||||||||||||||    
T  27924172 ctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgag 27924088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 23284066 - 23284161
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||   |||||||||||||||||||||||||| || | |||||| ||||||| | ||||||||||||||| ||||    
T  23284066 aatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggtacacccaaagatgaaaatgactaccgtatacatgaggaacc 23284161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 30854425 - 30854330
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||||| || |  || |||||||||| | || |||||||||||| ||||    
T  30854425 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgaggaacc 30854330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 2274985 - 2274891
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    |||||||||||| ||||  ||||||||||||||||||| ||||||||||||  || | ||| |||||||||| | ||||||||||| ||| ||||    
T  2274985 atgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgaggaacc 2274891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 378
Target Start/End: Original strand, 41911641 - 41911752
Alignment:
Q  268 taaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaa-aca 366  Q
    ||||||| ||||||||||||||||||||| ||| || | ||||| || ||||| | || |||||| ||||| |||||||||  |||||  |||||| |||    
T  41911641 taaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaatcactatcgtatatatgaggaacctcaaatcacccttccaaaaacaca 41911740  T
Q  367 cccacctaacac 378  Q
    ||||||||||||    
T  41911741 cccacctaacac 41911752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 248 - 338
Target Start/End: Original strand, 31881438 - 31881527
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgag 338  Q
    ||||||||||||| ||||  ||||||||||||||| |||| ||||||||||||  | ||||| || |||||| || |||||||||||||||    
T  31881438 aatgttctatttatattttttaaaagataaatacacggtgccgtatatatgcggaacatccagagatgaaaa-tactaccgtatacatgag 31881527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 248 - 338
Target Start/End: Complemental strand, 7671021 - 7670930
Alignment:
Q  248 aatgttctatttaaatttcct-aaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgag 338  Q
    ||||||||||||| ||||  | |||||||||||| |||||| ||||||| | || || | |||||||||||||| | |||||||||||||||    
T  7671021 aatgttctatttatatttttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgag 7670930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 606250 - 606209
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtc 289  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  606250 aatgttctatttaaattttttaaaagataaatacaaggtgtc 606209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 383
Target Start/End: Complemental strand, 17345052 - 17344918
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||||||||||||||  || |  ||||||||||| |||| | |||||||| || | |||||| | ||||||| |||||||| ||  |  ||||||||    
T  17345052 aatgttctatttaaattttttatataataaatacaagatgtcatgtatatgcggtacacccaaagataaaaattactaccgtatccacaaagaacctcaa 17344953  T
Q  348 actaccctctcaaaaaacacccacctaacaccaaaa 383  Q
    || ||| || | |||||||||||| ||| |||||||    
T  17344952 accaccatc-ccaaaaacacccacataataccaaaa 17344918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 35080689 - 35080755
Alignment:
Q  162 agggctgttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaa 228  Q
    ||||| |||||||||||||| |||| ||  || || ||||||||||||  |||||||||||||||||    
T  35080689 agggccgttcctacgaatctagaggctcgactctgtaagtgaaaagagggccgtaataaaataaaaa 35080755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 2024600 - 2024633
Alignment:
Q  204 aaagagatccgtaataaaataaaaacgtattttt 237  Q
    |||||| |||||||||||||||||||||||||||    
T  2024600 aaagaggtccgtaataaaataaaaacgtattttt 2024633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 456
Target Start/End: Original strand, 26719049 - 26719109
Alignment:
Q  396 aattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    |||||||||| || |||||| | |||||||||||||| || ||||||||||| || |||||    
T  26719049 aattctaataggcctaaaactaaacaacagaagaggaaaatgaaatcaaatcaggaaagaa 26719109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 456
Target Start/End: Original strand, 26988793 - 26988853
Alignment:
Q  396 aattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
    |||||||||| || |||||| | |||||||||||||| || ||||||||||| || |||||    
T  26988793 aattctaataggcctaaaactaaacaacagaagaggaaaatgaaatcaaatcaggaaagaa 26988853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 248 - 456
Target Start/End: Original strand, 173517 - 173726
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||||||||||||||  |||||||||||||||||||  ||||||||||||||| | |||||||| ||||| | |||||||||| |||| ||||||||    
T  173517 aatgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacctcaa 173616  T
Q  348 actaccctctca-aaaaacacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaat 446  Q
    || | |||| || ||||||||| || |||||||||||||||||      |||||||||| || |||||| |||||||||||||||| || ||||||||||    
T  173617 accatcctcccataaaaacacctacttaacaccaaaagcaagaggtctcaattctaataggcctaaaactagacaacagaagaggaaaaggaaatcaaat 173716  T
Q  447 cggggaagaa 456  Q
    | ||||||||    
T  173717 cagggaagaa 173726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 168 - 456
Target Start/End: Complemental strand, 1531 - 1243
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnn-taatgttctatttaaatttc 266  Q
    ||||||||||||||| ||| || ||| || |||||||||||  |||||||||||||||||||||||||||          |||||||||||||||| ||     
T  1531 gttcctacgaatctgaaggctctgctctgtaagtgaaaagaagtccgtaataaaataaaaacgtattttttttaaaagaataatgttctatttaaaattt 1432  T
Q  267 ctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaaca 366  Q
     ||||||||||||| ||||||  |||||||||| ||| | ||||| |||||||| | || |||||||||||| |||||||||| || || || ||||| |    
T  1431 ttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaaccacgct-tccaaaaaaa 1333  T
Q  367 cccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaatcggggaagaa 456  Q
      |||||||||||||||| ||||      |||||||| | || ||||||||||||||||||||||| || ||||||||||||| ||||||    
T  1332 ttcacctaacaccaaaagtaagaggacccaattctaacaggcctaaaacaagacaacagaagaggaaaaggaaatcaaatcggagaagaa 1243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 86; Significance: 8e-41; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 248 - 456
Target Start/End: Original strand, 230866 - 231075
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||||||||||||||  ||||||||||||  ||||||| |||||||||||||||| |||||||||||||| | |||| |||||||||| ||| ||||    
T  230866 aatgttctatttaaatttgttaaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgaggaacttcaa 230965  T
Q  348 actaccctctcaaaaaa-cacccacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaagaggagaaagaaatcaaat 446  Q
    || |||||| ||||||| |||||||||||||||||||||||||       ||||||||| || |||||||| | |||| ||||||| |  ||||||||||    
T  230966 accaccctcccaaaaaaccacccacctaacaccaaaagcaagaggacccgattctaataggcctaaaacaatataacaaaagaggaaagggaaatcaaat 231065  T
Q  447 cggggaagaa 456  Q
    | ||||||||    
T  231066 cagggaagaa 231075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 252 - 378
Target Start/End: Original strand, 24004 - 24130
Alignment:
Q  252 ttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaacta 351  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||| || | ||||| |||||||| |||||||||| ||| || || ||||||| |    
T  24004 ttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtatgcataaggaatctcaaacca 24103  T
Q  352 ccctctcaaaaaacacccacctaacac 378  Q
    ||||| ||||||||| |||||||||||    
T  24104 ccctcccaaaaaacatccacctaacac 24130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 248 - 364
Target Start/End: Original strand, 265 - 381
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||| || | ||||| |||||||| | ||||||||||||||  ||||||||    
T  265 aatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatgatgaacctcaa 364  T
Q  348 actaccctctcaaaaaa 364  Q
    || |||||| |||||||    
T  365 accaccctcccaaaaaa 381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 248 - 389
Target Start/End: Original strand, 206496 - 206633
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaa 347  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||| || | |||| ||||||||| | ||||||||||||||| ||||||||    
T  206496 aatgttctatttaaattttgtaaaagataaatacaaggtgtcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacctcaa 206595  T
Q  348 actaccctctcaaaaaacacccacctaacaccaaaagcaaga 389  Q
    || ||||    |||||||||||| ||||||| ||||| ||||    
T  206596 ac-accc---aaaaaaacacccatctaacactaaaaggaaga 206633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 168 - 355
Target Start/End: Complemental strand, 39105 - 38914
Alignment:
Q  168 gttcctacgaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacg----tatttttnnnnnnnnntaatgttctatttaaat 263  Q
    ||||||||||||||||||| ||   | || |||| ||||||| ||||||||||||||||||||    | |||||          ||||||||||||||||    
T  39105 gttcctacgaatctggaggctcgattctgtaagtaaaaagaggtccgtaataaaataaaaacgtttttttttttttttaaaaacaatgttctatttaaat 39006  T
Q  264 ttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccct 355  Q
    ||  |||||||||||||||||||||||||||||||||||| |  |||| |||||||| | ||||||||| ||||| |||||||||| |||||    
T  39005 tttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacctcaaaccaccct 38914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 276 - 432
Target Start/End: Complemental strand, 16095 - 15939
Alignment:
Q  276 aaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaacacccacctaa 375  Q
    ||||||||| |||||||| |||||| || |||||||| ||||||| | |||||||||||||||||||||||||| |||||   ||||||||||||||||     
T  16095 aaatacaagatgtcgtatgtatgcggtacatccaaagatgaaaatcactaccgtatacatgagaaacctcaaaccaccct-aaaaaaaacacccacctag 15997  T
Q  376 caccaaaagcaagat-agggtaattctaatatgcttaaaacaagacaacagaagagga 432  Q
    || |||||||||||| |    |||| ||||| || |||||||||||||||||| ||||    
T  15996 catcaaaagcaagatgatccaaattataataggcctaaaacaagacaacagaaaagga 15939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 286
Target Start/End: Complemental strand, 16161 - 16123
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggt 286  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  16161 aatgttctatttaaattttttaaaagataaatacaaggt 16123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 106634 - 106539
Alignment:
Q  248 aatgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||||| ||||  ||||||||||||| ||||||||||||||||||| || | |||||||||||||| | ||||||||||||||| ||||    
T  106634 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 106539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 427
Target Start/End: Complemental strand, 40257 - 39999
Alignment:
Q  176 gaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnnta--atgttctatttaaatttcct--aaa 271  Q
    |||||||||||||| ||| || |||||||||||| | |||||||||||||||| ||||||||          |  ||||||||||||| |||  |  |||    
T  40257 gaatctggaggttctgctctgtaagtgaaaagaggttcgtaataaaataaaaatgtattttttttaaaaagaacaatgttctatttaatttttttttaaa 40158  T
Q  272 agataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaa---cacc 368  Q
    |||||||||||||||| ||||| ||||   || | || ||||||||||| |  | |||||||||||| |||||||||| ||| || |||||||   || |    
T  40157 agataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacctcaaaccaccgtcccaaaaaaaaacatc 40058  T
Q  369 cacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaa 427  Q
    |||||||||| ||||||||||      |||||||||| || ||||||||||||||||||    
T  40057 cacctaacacaaaaagcaagaggacccaattctaataggcctaaaacaagacaacagaa 39999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 427
Target Start/End: Complemental strand, 138317 - 138059
Alignment:
Q  176 gaatctggaggttcagctttgcaagtgaaaagagatccgtaataaaataaaaacgtatttttnnnnnnnnnta--atgttctatttaaatttcct--aaa 271  Q
    |||||||||||||| ||| || |||||||||||| | |||||||||||||||| ||||||||          |  ||||||||||||| |||  |  |||    
T  138317 gaatctggaggttctgctctgtaagtgaaaagaggttcgtaataaaataaaaatgtattttttttaaaaagaacaatgttctatttaatttttttttaaa 138218  T
Q  272 agataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaa---cacc 368  Q
    |||||||||||||||| ||||| ||||   || | || ||||||||||| |  | |||||||||||| |||||||||| ||| || |||||||   || |    
T  138217 agataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacctcaaaccaccgtcccaaaaaaaaacatc 138118  T
Q  369 cacctaacaccaaaagcaagatagggtaattctaatatgcttaaaacaagacaacagaa 427  Q
    |||||||||| ||||||||||      |||||||||| || ||||||||||||||||||    
T  138117 cacctaacacaaaaagcaagaggacccaattctaataggcctaaaacaagacaacagaa 138059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 343
Target Start/End: Complemental strand, 1437 - 1344
Alignment:
Q  250 tgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacc 343  Q
    ||||||||||| ||||  ||||||||||||||||| || |||||||||||| || | ||| || ||||||| | ||||||||||||||| ||||    
T  1437 tgttctatttatattttttaaaagataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 1344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 386
Target Start/End: Original strand, 351361 - 351479
Alignment:
Q  268 taaaagataaatacaaggtgtcgtatatatgcgatatatccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaacac 367  Q
    |||||||||||||||||||||||||||||||   || | ||||||||||||||   ||| | ||||| |||  ||||||||| ||  || | |||||||     
T  351361 taaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaatcgctactgaatacacgaggtacctcaaaccacaatcccgaaaaacat 351460  T
Q  368 ccacctaacaccaaaagca 386  Q
    ||||||||||| |||||||    
T  351461 ccacctaacacgaaaagca 351479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 386
Target Start/End: Original strand, 350272 - 350353
Alignment:
Q  305 atccaaaggtgaaaattattaccgtatacatgagaaacctcaaactaccctctcaaaaaacacccacctaacaccaaaagca 386  Q
    ||||||||||||||||   ||| | |||||||||  ||||||||| ||  || ||||||||| |||||||||||||||||||    
T  350272 atccaaaggtgaaaatcgctactgaatacatgaggtacctcaaaccacaatcccaaaaaacatccacctaacaccaaaagca 350353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 183155 - 183106
Alignment:
Q  249 atgttctatttaaatttcctaaaagataaatacaaggtgtcgtatatatg 298  Q
    |||||||||||| ||||  |||||||||||||||| || |||||||||||    
T  183155 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 183106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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