View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14228_high_6 (Length: 361)
Name: NF14228_high_6
Description: NF14228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14228_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 350
Target Start/End: Original strand, 39053249 - 39053598
Alignment:
| Q |
1 |
ataactattaattacacggcattccgatttctcagcttcctctttcaaactcaatttcaatccatcaattctannnnnnnacccctaatgtttcaatcag |
100 |
Q |
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| T |
39053249 |
ataactattaattacacggcattccgatttctcagcttcctctttcaaactcaatttcaatccatcaattctatttttttacccctaatgtttcaatcag |
39053348 |
T |
|
| Q |
101 |
aataaccaaggtactgcatgaaaactgtgttattttnnnnnnnnnnnnnnntatgagatgttattattgtttagtgtagaaattgtttgcagaagaagaa |
200 |
Q |
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| T |
39053349 |
aataaccaaggtactgcatgaaaactgtgttattttaaaaaaaaataaaaatatgagatgttattattgtttagtgtagaaattgtttgcagaagaagaa |
39053448 |
T |
|
| Q |
201 |
agggaaggaatgaatgacaatgtttgattgtgattgttaatgtgaggaaaatggattcagcgaggagttggtttcataagtttcaaccgcgggatagact |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39053449 |
agggaaggaatgaatgacaatgtttgattgtgattgttaatgtgaggaaaatggattcagcgaggagttggtttcataagtttcaaccgcgggatagact |
39053548 |
T |
|
| Q |
301 |
gagagcttcaacgaggaagaaggatgatggtaatggcgtgatagatgatg |
350 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39053549 |
gagagcttcaacgaggaagaaggatgatggtaatggcgtgatagatgatg |
39053598 |
T |
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