View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14228_low_3 (Length: 487)

Name: NF14228_low_3
Description: NF14228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14228_low_3
NF14228_low_3
[»] chr1 (20 HSPs)
chr1 (400-470)||(3490426-3490496)
chr1 (400-471)||(10475012-10475083)
chr1 (400-471)||(38078696-38078768)
chr1 (400-471)||(17831566-17831637)
chr1 (402-471)||(21530644-21530713)
chr1 (400-471)||(22881651-22881722)
chr1 (433-471)||(1262870-1262908)
chr1 (433-471)||(19562656-19562694)
chr1 (402-472)||(22907373-22907443)
chr1 (400-471)||(6415036-6415108)
chr1 (400-443)||(10577804-10577847)
chr1 (436-471)||(12443495-12443530)
chr1 (416-471)||(25098590-25098645)
chr1 (428-471)||(38076005-38076048)
chr1 (400-462)||(42490648-42490710)
chr1 (400-442)||(48548032-48548074)
chr1 (434-471)||(2896156-2896193)
chr1 (434-471)||(36878448-36878485)
chr1 (432-472)||(609492-609532)
chr1 (395-443)||(42359518-42359566)
[»] chr3 (11 HSPs)
chr3 (400-471)||(21479071-21479142)
chr3 (400-470)||(14747514-14747584)
chr3 (395-444)||(10318108-10318157)
chr3 (395-443)||(10335355-10335403)
chr3 (418-471)||(8789585-8789638)
chr3 (400-471)||(14027962-14028031)
chr3 (400-443)||(750688-750731)
chr3 (439-471)||(8383249-8383281)
chr3 (400-471)||(11313835-11313904)
chr3 (439-471)||(12674536-12674568)
chr3 (435-471)||(25074777-25074813)
[»] chr4 (15 HSPs)
chr4 (400-470)||(42640479-42640549)
chr4 (400-465)||(15029718-15029783)
chr4 (418-470)||(7251663-7251715)
chr4 (400-471)||(3947801-3947871)
chr4 (400-443)||(4157105-4157148)
chr4 (418-465)||(7377340-7377387)
chr4 (400-443)||(19482615-19482658)
chr4 (400-443)||(20633432-20633475)
chr4 (400-443)||(33950083-33950126)
chr4 (406-443)||(35158054-35158091)
chr4 (434-471)||(35723420-35723457)
chr4 (416-469)||(56049846-56049899)
chr4 (434-470)||(17345451-17345487)
chr4 (403-443)||(27706246-27706286)
chr4 (429-465)||(50280863-50280899)
[»] chr8 (13 HSPs)
chr8 (426-471)||(13844631-13844676)
chr8 (400-471)||(926823-926900)
chr8 (400-471)||(20785500-20785571)
chr8 (400-443)||(24413629-24413672)
chr8 (436-471)||(31236612-31236647)
chr8 (418-463)||(22595965-22596010)
chr8 (400-471)||(18069166-18069235)
chr8 (400-443)||(3951598-3951641)
chr8 (434-471)||(39954314-39954351)
chr8 (402-438)||(14634203-14634239)
chr8 (403-443)||(18964121-18964161)
chr8 (439-471)||(27213539-27213571)
chr8 (395-443)||(43737882-43737930)
[»] chr2 (16 HSPs)
chr2 (400-465)||(26769464-26769529)
chr2 (400-472)||(21374733-21374806)
chr2 (400-471)||(44860275-44860344)
chr2 (433-471)||(21782853-21782891)
chr2 (400-471)||(31283995-31284072)
chr2 (434-471)||(21616749-21616786)
chr2 (434-471)||(27084249-27084286)
chr2 (400-457)||(36096424-36096481)
chr2 (418-471)||(38117194-38117247)
chr2 (400-443)||(18631468-18631511)
chr2 (400-471)||(21091677-21091747)
chr2 (434-465)||(22550283-22550314)
chr2 (434-471)||(896198-896235)
chr2 (400-437)||(15907901-15907938)
chr2 (415-471)||(12748652-12748708)
chr2 (439-471)||(18420469-18420501)
[»] chr6 (17 HSPs)
chr6 (400-471)||(7377932-7378003)
chr6 (402-471)||(26562645-26562713)
chr6 (400-471)||(5970143-5970214)
chr6 (400-471)||(12868710-12868781)
chr6 (420-471)||(19602216-19602267)
chr6 (400-472)||(12696278-12696349)
chr6 (400-472)||(29220203-29220273)
chr6 (403-470)||(3209332-3209404)
chr6 (400-471)||(20371145-20371217)
chr6 (434-471)||(677824-677861)
chr6 (434-471)||(7996413-7996450)
chr6 (434-471)||(8022351-8022388)
chr6 (434-471)||(10842519-10842556)
chr6 (400-471)||(31959113-31959183)
chr6 (400-444)||(18367784-18367828)
chr6 (439-471)||(19040344-19040376)
chr6 (439-471)||(33001324-33001356)
[»] scaffold0697 (1 HSPs)
scaffold0697 (402-471)||(1599-1668)
[»] chr5 (11 HSPs)
chr5 (400-471)||(32766978-32767047)
chr5 (400-470)||(15382424-15382500)
chr5 (434-471)||(39205867-39205904)
chr5 (420-471)||(31084296-31084347)
chr5 (429-471)||(2039884-2039926)
chr5 (418-464)||(2436893-2436939)
chr5 (402-443)||(13287468-13287509)
chr5 (400-471)||(26716098-26716168)
chr5 (400-471)||(26985838-26985908)
chr5 (402-442)||(20683330-20683370)
chr5 (439-471)||(38816730-38816762)
[»] chr7 (9 HSPs)
chr7 (400-471)||(9778455-9778524)
chr7 (395-473)||(24105627-24105704)
chr7 (400-443)||(18213103-18213146)
chr7 (400-471)||(33384617-33384688)
chr7 (428-471)||(45056936-45056979)
chr7 (402-443)||(5954213-5954254)
chr7 (434-471)||(32308107-32308144)
chr7 (402-471)||(42720925-42720994)
chr7 (440-472)||(28155563-28155595)
[»] scaffold0168 (1 HSPs)
scaffold0168 (400-443)||(20990-21033)
[»] scaffold0004 (1 HSPs)
scaffold0004 (434-472)||(92794-92832)
[»] scaffold0279 (1 HSPs)
scaffold0279 (400-471)||(17905-17976)
[»] scaffold0019 (1 HSPs)
scaffold0019 (418-470)||(71694-71746)


Alignment Details
Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 3490496 - 3490426
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaa 470  Q
    ||||||||||||||| | || |||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  3490496 tgaagcacggatacggatacagacaccggacacgacactgacacgccgacactgctaataatttgagaaaa 3490426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 10475083 - 10475012
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||| ||||||||||||| ||||| |||  ||||||||||||| |||||||| ||||||||||    
T  10475083 tgaagcacggatatgaacacggacaccggacacgacattgacacgccgacaccgctaataacttgagaaaat 10475012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 38078768 - 38078696
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacac-aacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||| ||||||||||| ||||| ||||| |||||| |||||| ||||||||||||| |||||    
T  38078768 tgaagcacggatacggacacggacaccggacacgaacactgacacgtcgacacagctaataatttgaaaaaat 38078696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 17831637 - 17831566
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||  |||| |||||| || || |||| ||||||||||||| |||||||||||||||||||    
T  17831637 tgaagcacggatacagacacagacaccggatacgacactgacacgccgacaccgctaataatttgagaaaat 17831566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 471
Target Start/End: Original strand, 21530644 - 21530713
Alignment:
Q  402 aagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||||||||||| ||| | |||||||||||  |||| ||||||||||||| | |||||||||||||||||    
T  21530644 aagcacggatacaaactccgacaccagacatgacacagacacgccgacaccgttaataatttgagaaaat 21530713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 22881722 - 22881651
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||||||||||||   ||||||||||| ||||| |||| |||||||||||||  |||||||||||| |||||    
T  22881722 tgaagcacggatatagacacggacaccggacacgacactgacacgccgacacaactaataatttgaaaaaat 22881651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 471
Target Start/End: Original strand, 1262870 - 1262908
Alignment:
Q  433 aacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  1262870 aacacggacacgccgacacagctaataatttgagaaaat 1262908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 471
Target Start/End: Complemental strand, 19562694 - 19562656
Alignment:
Q  433 aacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  19562694 aacactgacacgccgacactgctaataatttgagaaaat 19562656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 472
Target Start/End: Complemental strand, 22907443 - 22907373
Alignment:
Q  402 aagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaatt 472  Q
    ||||||||||||| || | |||||||||||| |||| |||||| |||| | | ||||||||||||||||||    
T  22907443 aagcacggatacggactccgacaccagacacgacacagacacgtcgacgccgttaataatttgagaaaatt 22907373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 6415108 - 6415036
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacaca-acacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||| ||||| ||||| |||||  |||| ||||||||||||  |||||| ||||||||||||    
T  6415108 tgaagcacggatacggacacgaacaccggacacggacactgacacgccgacatcgctaattatttgagaaaat 6415036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 443
Target Start/End: Complemental strand, 10577847 - 10577804
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacac 443  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||||    
T  10577847 tgaagcacggatacggacacggacaccggacacgacacggacac 10577804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 471
Target Start/End: Complemental strand, 12443530 - 12443495
Alignment:
Q  436 acggacacgccgacactgctaataatttgagaaaat 471  Q
    |||||||||||||||| |||||||||||||||||||    
T  12443530 acggacacgccgacacagctaataatttgagaaaat 12443495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 471
Target Start/End: Complemental strand, 25098645 - 25098590
Alignment:
Q  416 acacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||| ||||||| ||| ||||| |||||||| ||| |||||||||||||||    
T  25098645 acacggacaacagacacgacaaggacaagccgacaccgctgataatttgagaaaat 25098590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 471
Target Start/End: Complemental strand, 38076048 - 38076005
Alignment:
Q  428 gacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||||    
T  38076048 gacacgacacggacacgacgacactgctaataatttgagtaaat 38076005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 462
Target Start/End: Complemental strand, 42490710 - 42490648
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatt 462  Q
    ||||||||| ||| | ||||||||| |||| |  |||||||||||||||||||| ||||||||    
T  42490710 tgaagcacgaatatggacacggacatcagatatgacacggacacgccgacactgttaataatt 42490648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 442
Target Start/End: Complemental strand, 48548074 - 48548032
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggaca 442  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||    
T  48548074 tgaagcacggatacggacacggacaccggacacaatacggaca 48548032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Complemental strand, 2896193 - 2896156
Alignment:
Q  434 acacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  2896193 acactgacacgccgacaccgctaataatttgagaaaat 2896156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 36878448 - 36878485
Alignment:
Q  434 acacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  36878448 acactgacacgccgacaccgctaataatttgagaaaat 36878485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 432 - 472
Target Start/End: Complemental strand, 609532 - 609492
Alignment:
Q  432 caacacggacacgccgacactgctaataatttgagaaaatt 472  Q
    |||||| |||||||||||||  |||||||||||||||||||    
T  609532 caacactgacacgccgacaccactaataatttgagaaaatt 609492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 443
Target Start/End: Complemental strand, 42359566 - 42359518
Alignment:
Q  395 ttctctgaagcacggatacgaacacggacaccagacacaacacggacac 443  Q
    |||| ||||||||||||||| ||||| |||||  |||||||||||||||    
T  42359566 ttctatgaagcacggatacggacacgaacaccgtacacaacacggacac 42359518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 8e-16; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 21479071 - 21479142
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||| ||||||| ||||||||||| ||||| |||| ||||||||||||| ||||||||||||| |||||    
T  21479071 tgaagcatggatacggacacggacaccggacacgacactgacacgccgacacagctaataatttgaaaaaat 21479142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 14747514 - 14747584
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaa 470  Q
    ||||||||||||||| | ||||||||| ||||| |||| ||||||||||||| ||||||||||||| ||||    
T  14747514 tgaagcacggatacggatacggacaccggacacgacactgacacgccgacacagctaataatttgaaaaaa 14747584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 444
Target Start/End: Complemental strand, 10318157 - 10318108
Alignment:
Q  395 ttctctgaagcacggatacgaacacggacaccagacacaacacggacacg 444  Q
    |||| ||||||||||||||||||||||||||| ||||| |||||||||||    
T  10318157 ttctatgaagcacggatacgaacacggacaccggacacgacacggacacg 10318108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 443
Target Start/End: Complemental strand, 10335403 - 10335355
Alignment:
Q  395 ttctctgaagcacggatacgaacacggacaccagacacaacacggacac 443  Q
    |||| ||||||||||||||||||||||||||| ||||| ||||||||||    
T  10335403 ttctatgaagcacggatacgaacacggacaccggacacgacacggacac 10335355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 418 - 471
Target Start/End: Complemental strand, 8789638 - 8789585
Alignment:
Q  418 acggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||| |||||||||| ||||| ||||||| ||| |||||||||||||||    
T  8789638 acggacaccggacacaacacagacacaccgacacggcttataatttgagaaaat 8789585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 14027962 - 14028031
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||  ||||||| ||||||  ||| |||||||    
T  14027962 tgaagcacggatacggacacggacaccggacacgacacggaca--ccgacacagctaatttttttagaaaat 14028031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 443
Target Start/End: Complemental strand, 750731 - 750688
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacac 443  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||||    
T  750731 tgaagcacggatacggacacggacaccggacacgacacggacac 750688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 471
Target Start/End: Original strand, 8383249 - 8383281
Alignment:
Q  439 gacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||| |||||||||||||||||||    
T  8383249 gacacgccgacaccgctaataatttgagaaaat 8383281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 11313904 - 11313835
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||| ||||| ||||  || || | || ||||  |||||||||||||||||||||||||||    
T  11313904 tgaagcacggatacggacacgaacacgggagacgaaacagaca--ccgacactgctaataatttgagaaaat 11313835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 471
Target Start/End: Complemental strand, 12674568 - 12674536
Alignment:
Q  439 gacacgccgacactgctaataatttgagaaaat 471  Q
    ||||| |||||||||||||||||||||||||||    
T  12674568 gacacaccgacactgctaataatttgagaaaat 12674536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 471
Target Start/End: Original strand, 25074777 - 25074813
Alignment:
Q  435 cacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||||| | |||||||||||||||||    
T  25074777 cacggacacgccgacaccgataataatttgagaaaat 25074813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 42640479 - 42640549
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaa 470  Q
    ||||||||||||||| |||||||||   |||||||||||||||||||||||| ||| ||||||||| ||||    
T  42640479 tgaagcacggatacggacacggacattggacacaacacggacacgccgacacagctgataatttgaaaaaa 42640549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 15029718 - 15029783
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttga 465  Q
    ||||||| ||||||| ||| ||| ||| ||||| |||| ||||||| |||||||||||||||||||    
T  15029718 tgaagcagggatacggacatggagaccggacacgacactgacacgcagacactgctaataatttga 15029783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 7251715 - 7251663
Alignment:
Q  418 acggacaccagacacaacacggacacgccgacactgctaataatttgagaaaa 470  Q
    ||||||||| |||||||||| || |||||||||| ||||||||||||| ||||    
T  7251715 acggacaccggacacaacacagaaacgccgacacagctaataatttgaaaaaa 7251663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 3947871 - 3947801
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||||| | |||||| |||||||||||| ||| | |||||||| |||||||| ||||||||||||| |||||    
T  3947871 tgaagctcagatacggacacggacaccacacaga-cacggacatgccgacacagctaataatttgaaaaaat 3947801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 443
Target Start/End: Original strand, 4157105 - 4157148
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacac 443  Q
    ||||||||||||||| ||||||||||||||||| |||| |||||    
T  4157105 tgaagcacggatacggacacggacaccagacacgacacagacac 4157148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 465
Target Start/End: Original strand, 7377340 - 7377387
Alignment:
Q  418 acggacaccagacacaacacggacacgccgacactgctaataatttga 465  Q
    ||||||||||||||| ||||||||||||| ||||  ||||||||||||    
T  7377340 acggacaccagacacgacacggacacgcctacacaactaataatttga 7377387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 443
Target Start/End: Original strand, 19482615 - 19482658
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacac 443  Q
    |||||||||||||||||||| |||||||||||| |||| |||||    
T  19482615 tgaagcacggatacgaacacagacaccagacacgacacagacac 19482658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 443
Target Start/End: Original strand, 20633432 - 20633475
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacac 443  Q
    ||||||||||||||| ||||||||||||||||| | ||||||||    
T  20633432 tgaagcacggatacggacacggacaccagacacgatacggacac 20633475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 443
Target Start/End: Original strand, 33950083 - 33950126
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacac 443  Q
    |||||||||| ||||||||||||||||||||| |||||| ||||    
T  33950083 tgaagcacgggtacgaacacggacaccagacataacacgaacac 33950126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 443
Target Start/End: Complemental strand, 35158091 - 35158054
Alignment:
Q  406 acggatacgaacacggacaccagacacaacacggacac 443  Q
    ||||||||| ||||||||||| ||||||||||||||||    
T  35158091 acggatacggacacggacaccggacacaacacggacac 35158054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Complemental strand, 35723457 - 35723420
Alignment:
Q  434 acacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  35723457 acactgacacgccgacaccgctaataatttgagaaaat 35723420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 56049846 - 56049899
Alignment:
Q  416 acacggacaccagacacaacacggacacgccgacactgctaataatttgagaaa 469  Q
    ||||||||||| ||||| ||||||||||  |||||| | |||||||||||||||    
T  56049846 acacggacaccggacacgacacggacacatcgacaccgataataatttgagaaa 56049899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 434 - 470
Target Start/End: Complemental strand, 17345487 - 17345451
Alignment:
Q  434 acacggacacgccgacactgctaataatttgagaaaa 470  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  17345487 acactgacacgccgacaccgctaataatttgagaaaa 17345451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 443
Target Start/End: Complemental strand, 27706286 - 27706246
Alignment:
Q  403 agcacggatacgaacacggacaccagacacaacacggacac 443  Q
    |||||||||||| ||||||||||||||||| ||| ||||||    
T  27706286 agcacggatacggacacggacaccagacacgacagggacac 27706246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 429 - 465
Target Start/End: Original strand, 50280863 - 50280899
Alignment:
Q  429 acacaacacggacacgccgacactgctaataatttga 465  Q
    |||| |||||||||||||||||| |||||||||||||    
T  50280863 acacgacacggacacgccgacacagctaataatttga 50280899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 426 - 471
Target Start/End: Complemental strand, 13844676 - 13844631
Alignment:
Q  426 cagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  13844676 cagacacgacacggacacgccgacactgctaataatttgagaaaat 13844631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 926900 - 926823
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacg------gacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||||||||||||||| ||||| |||||      |||||||| ||||| ||||||||||||||||||    
T  926900 tgaagcacggatacgaacacggacaccggacacgacacggacactgacacgccaacactcctaataatttgagaaaat 926823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 20785571 - 20785500
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||| |||||||||||  |||| ||||||| | ||| |||| |||||||||||||| ||||    
T  20785571 tgaagcacggatacggacacggacaccgtacacgacacggatatgccaacaccgctaataatttgaggaaat 20785500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 443
Target Start/End: Complemental strand, 24413672 - 24413629
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacac 443  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||    
T  24413672 tgaagcacggatacggacacggacaccagacacgacacggacac 24413629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 471
Target Start/End: Complemental strand, 31236647 - 31236612
Alignment:
Q  436 acggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||||||||||||||||||||||||    
T  31236647 acggacacgccgacactgctaataatttgagaaaat 31236612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 418 - 463
Target Start/End: Original strand, 22595965 - 22596010
Alignment:
Q  418 acggacaccagacacaacacggacacgccgacactgctaataattt 463  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||||    
T  22595965 acggacaccggacacaacactgacacgccgacacagctaataattt 22596010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 18069235 - 18069166
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||| | |||| ||||| ||||||||||||||||    ||||| |||||||||||||||||||    
T  18069235 tgaagcacggatatggacacagacacaagacacaacacggaca--gtgacaccgctaataatttgagaaaat 18069166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 443
Target Start/End: Complemental strand, 3951641 - 3951598
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacac 443  Q
    ||||||||||||||| |||||||||||||| || ||||||||||    
T  3951641 tgaagcacggatacggacacggacaccagatacgacacggacac 3951598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Complemental strand, 39954351 - 39954314
Alignment:
Q  434 acacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  39954351 acaccgacacgccgacaccgctaataatttgagaaaat 39954314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 438
Target Start/End: Complemental strand, 14634239 - 14634203
Alignment:
Q  402 aagcacggatacgaacacggacaccagacacaacacg 438  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  14634239 aagcacggatacgaacatggacaccagacacagcacg 14634203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 443
Target Start/End: Original strand, 18964121 - 18964161
Alignment:
Q  403 agcacggatacgaacacggacaccagacacaacacggacac 443  Q
    ||||| |||||| ||||||||||||||||| ||||||||||    
T  18964121 agcacagatacggacacggacaccagacacgacacggacac 18964161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 471
Target Start/End: Original strand, 27213539 - 27213571
Alignment:
Q  439 gacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||||||||||||| |||||||    
T  27213539 gacacgccgacactgctaataatttcagaaaat 27213571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 443
Target Start/End: Complemental strand, 43737930 - 43737882
Alignment:
Q  395 ttctctgaagcacggatacgaacacggacaccagacacaacacggacac 443  Q
    |||| ||||||||||||||  ||||||||||| ||||| ||||||||||    
T  43737930 ttctatgaagcacggatacagacacggacaccggacacgacacggacac 43737882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 26769464 - 26769529
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttga 465  Q
    ||||||||||||||| ||||||||||| ||||| |||| |||||||||||||  ||||||||||||    
T  26769464 tgaagcacggatacggacacggacaccggacacgacacagacacgccgacacaactaataatttga 26769529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 21374806 - 21374733
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacaca-acacggacacgccgacactgctaataatttgagaaaatt 472  Q
    ||||||||||||||| ||||||||||| |||||  ||||  |||||||||||| ||||||||||||| ||||||    
T  21374806 tgaagcacggatacggacacggacaccggacacggacactaacacgccgacacagctaataatttgaaaaaatt 21374733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 44860275 - 44860344
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||| | ||| ||||||||||| |||||||||  | ||||| |||||||||||||||||||    
T  44860275 tgaagcacggatacggatacgtacaccagacacgacacggaca--ctgacaccgctaataatttgagaaaat 44860344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 471
Target Start/End: Complemental strand, 21782891 - 21782853
Alignment:
Q  433 aacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  21782891 aacactgacacgccgacactgctaataatttgagaaaat 21782853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 31283995 - 31284072
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacac------gccgacactgctaataatttgagaaaat 471  Q
    |||||||| |||||| ||||||||||| |||| |||||| ||||      ||||||||||||||||||||||||||||    
T  31283995 tgaagcacagatacggacacggacaccggacataacacgtacacttacacgccgacactgctaataatttgagaaaat 31284072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 21616749 - 21616786
Alignment:
Q  434 acacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||||||||||||||||| |||||||||||||||||||    
T  21616749 acacggacacgccgacaccgctaataatttgagaaaat 21616786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 27084249 - 27084286
Alignment:
Q  434 acacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||||||||| |||||||||||||||||||||||||||    
T  27084249 acacggacactccgacactgctaataatttgagaaaat 27084286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 457
Target Start/End: Complemental strand, 36096481 - 36096424
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaa 457  Q
    ||||||| | ||||| ||||||||||||| ||| |||||||||||||||||| |||||    
T  36096481 tgaagcaagtatacggacacggacaccaggcacgacacggacacgccgacacagctaa 36096424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 418 - 471
Target Start/End: Complemental strand, 38117247 - 38117194
Alignment:
Q  418 acggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||| ||||| |||| ||||||||||||| ||||||||||||| |||||    
T  38117247 acggacaccggacacgacactgacacgccgacacagctaataatttgaaaaaat 38117194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 443
Target Start/End: Complemental strand, 18631511 - 18631468
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacac 443  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||    
T  18631511 tgaagcacagatacgaacacggacaccggacacgacacggacac 18631468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 21091677 - 21091747
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||||||||||||| ||||||||||| ||||   |||| ||||| ||||||| ||||||||||| |||||||    
T  21091677 tgaagcacggatacaaacacggacacaagac-ggacactgacacaccgacaccgctaataatttaagaaaat 21091747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 465
Target Start/End: Complemental strand, 22550314 - 22550283
Alignment:
Q  434 acacggacacgccgacactgctaataatttga 465  Q
    ||||||||||||||||||||||||||||||||    
T  22550314 acacggacacgccgacactgctaataatttga 22550283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 896198 - 896235
Alignment:
Q  434 acacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  896198 acactgacacgccgacactgctaatagtttgagaaaat 896235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 15907938 - 15907901
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacac 437  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  15907938 tgaagcacggatacaaacacggacaccagacacgacac 15907901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 471
Target Start/End: Original strand, 12748652 - 12748708
Alignment:
Q  415 aacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||| |||||| ||||| |||||||||||| ||||  | |||||||||||||||||    
T  12748652 aacacagacaccggacacgacacggacacgctgacatggataataatttgagaaaat 12748708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 471
Target Start/End: Complemental strand, 18420501 - 18420469
Alignment:
Q  439 gacacgccgacactgctaataatttgagaaaat 471  Q
    |||||||| ||||||||||||||||||||||||    
T  18420501 gacacgccaacactgctaataatttgagaaaat 18420469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 7377932 - 7378003
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||| || | |||||| |||||||||| ||||| ||||||| ||||| |||||||||||||    
T  7377932 tgaagcacggatacggacccagacaccggacacaacacagacaccccgacaccgctaaaaatttgagaaaat 7378003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 471
Target Start/End: Original strand, 26562645 - 26562713
Alignment:
Q  402 aagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||||| ||||||||||| ||||||  ||  ||||||||||||||||||||||||| |||||||||||||    
T  26562645 aagcacagatacgaacacagacaccgcacg-aacacggacacgccgacactgctaaaaatttgagaaaat 26562713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 5970214 - 5970143
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||||||| |||||| ||||||||||| ||||  ||||||||||| |||||| | ||||||||||| |||||    
T  5970214 tgaagcacagatacggacacggacaccggacatgacacggacacgtcgacacagttaataatttgaaaaaat 5970143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 12868781 - 12868710
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||| ||||||| || |||||||| ||||| |||| ||||||||||||| | ||||||||||| |||||    
T  12868781 tgaagcagggatacggactcggacaccggacacgacactgacacgccgacacagttaataatttgaaaaaat 12868710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 471
Target Start/End: Complemental strand, 19602267 - 19602216
Alignment:
Q  420 ggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||| |||||||||||||||| || |||||| |||||||||||||||||    
T  19602267 ggacaccggacacaacacggacacaccaacactgataataatttgagaaaat 19602216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 472
Target Start/End: Original strand, 12696278 - 12696349
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacaca-acacggacacgccgacactgctaataatttgagaaaatt 472  Q
    ||||||||||||||| ||||||||||  |||||  |||| ||||||||||||| ||||||||||||| ||||||    
T  12696278 tgaagcacggatacggacacggacac--gacacggacactgacacgccgacacagctaataatttgaaaaaatt 12696349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 472
Target Start/End: Original strand, 29220203 - 29220273
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaatt 472  Q
    ||||||| ||||||||||||||||||| ||||  ||||||  | |||||||  ||||||||||||||||||||    
T  29220203 tgaagcagggatacgaacacggacacctgacatgacacgg--atgccgacaacgctaataatttgagaaaatt 29220273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 470
Target Start/End: Original strand, 3209332 - 3209404
Alignment:
Q  403 agcacggatacgaacacggacaccagacacaacacg-----gacacgccgacactgctaataatttgagaaaa 470  Q
    ||||||||||| |||||||||||| ||||| |||||     ||||||||||||| ||||||||||||| ||||    
T  3209332 agcacggatacaaacacggacaccggacacgacacgacacagacacgccgacacagctaataatttgaaaaaa 3209404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 20371217 - 20371145
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacaca-acacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||| |||| || ||| |||||  |||  ||||||||||||| |||||||||||||||||||    
T  20371217 tgaagcacggatacggacacagaaaccggacacggacattgacacgccgacaccgctaataatttgagaaaat 20371145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 677824 - 677861
Alignment:
Q  434 acacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  677824 acactgacacgccgacactgttaataatttgagaaaat 677861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Complemental strand, 7996450 - 7996413
Alignment:
Q  434 acacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  7996450 acactgacatgccgacactgctaataatttgagaaaat 7996413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 8022351 - 8022388
Alignment:
Q  434 acacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  8022351 acactgacatgccgacactgctaataatttgagaaaat 8022388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 10842519 - 10842556
Alignment:
Q  434 acacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  10842519 acacggacacgccgacaccgctaataatttgaaaaaat 10842556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 31959113 - 31959183
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacac-aacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||| |||||||||   ||||| ||||| ||||||||| ||| ||||||||||||| |||||    
T  31959113 tgaagcacggatacggacacggacat--gacacgaacactgacacgccgtcacagctaataatttgaaaaaat 31959183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 18367784 - 18367828
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacg 444  Q
    ||||||||||||||| ||||||||||| ||||| ||| |||||||    
T  18367784 tgaagcacggatacggacacggacaccggacacgacatggacacg 18367828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 471
Target Start/End: Original strand, 19040344 - 19040376
Alignment:
Q  439 gacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||| |||||||||||||||||||    
T  19040344 gacacgccgacaccgctaataatttgagaaaat 19040376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 471
Target Start/End: Complemental strand, 33001356 - 33001324
Alignment:
Q  439 gacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||||||||||||||| |||||    
T  33001356 gacacgccgacactgctaataatttgaaaaaat 33001324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 471
Target Start/End: Original strand, 1599 - 1668
Alignment:
Q  402 aagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||||||||||| ||| | |||||||||||  |||| ||||||||||||| | |||||||||||||||||    
T  1599 aagcacggatacaaactccgacaccagacatgacacagacacgccgacaccgttaataatttgagaaaat 1668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 32767047 - 32766978
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||||||||||||| ||||| |||||  ||||| |||||||||  ||||||| |||||||||||||||||||    
T  32767047 tgaagcacggatacaaacacagacactggacacgacacggaca--ccgacaccgctaataatttgagaaaat 32766978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 15382424 - 15382500
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacg------gacacgccgacactgctaataatttgagaaaa 470  Q
    ||||||||||||||| ||||||||||| ||||| |||||      ||||||||||||| ||||||||||||| ||||    
T  15382424 tgaagcacggatacggacacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaa 15382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 39205867 - 39205904
Alignment:
Q  434 acacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  39205867 acacggacacgtcgacactgctaataatttgagaaaat 39205904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 471
Target Start/End: Original strand, 31084296 - 31084347
Alignment:
Q  420 ggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||| ||||| |||| ||||||||||||| ||||||||||||| |||||    
T  31084296 ggacaccggacacgacactgacacgccgacacagctaataatttgaaaaaat 31084347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 429 - 471
Target Start/End: Complemental strand, 2039926 - 2039884
Alignment:
Q  429 acacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||||||||||||||| |||||| | |||||||||||||||||    
T  2039926 acacaacacggacacgtcgacaccggtaataatttgagaaaat 2039884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 418 - 464
Target Start/End: Original strand, 2436893 - 2436939
Alignment:
Q  418 acggacaccagacacaacacggacacgccgacactgctaataatttg 464  Q
    ||||||||| ||||| |||| ||||||||||||| ||||||||||||    
T  2436893 acggacaccggacacgacactgacacgccgacaccgctaataatttg 2436939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 443
Target Start/End: Complemental strand, 13287509 - 13287468
Alignment:
Q  402 aagcacggatacgaacacggacaccagacacaacacggacac 443  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||    
T  13287509 aagcacggatacggacacggacaccggacacgacacggacac 13287468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 26716098 - 26716168
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacaca-acacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||||||| |||||| ||||||||||  |||| | |||  |||| ||||||||||||||||||||||||||||    
T  26716098 tgaagcaccgatacggacacggacac--gacatagacattgacatgccgacactgctaataatttgagaaaat 26716168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 26985838 - 26985908
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacaca-acacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||||||| |||||| ||||||||||  |||| | |||  |||| ||||||||||||||||||||||||||||    
T  26985838 tgaagcaccgatacggacacggacac--gacatagacattgacatgccgacactgctaataatttgagaaaat 26985908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 442
Target Start/End: Original strand, 20683330 - 20683370
Alignment:
Q  402 aagcacggatacgaacacggacaccagacacaacacggaca 442  Q
    ||||||||||||| ||||||||||| ||||| |||||||||    
T  20683330 aagcacggatacggacacggacaccggacacgacacggaca 20683370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 471
Target Start/End: Complemental strand, 38816762 - 38816730
Alignment:
Q  439 gacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||| |||||||||||||||||||    
T  38816762 gacacgccgacaccgctaataatttgagaaaat 38816730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 9778455 - 9778524
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||  | ||||| ||| ||||||||| |||||    
T  9778455 tgaagcacggatacggacacggacaccggacacgacacggaca--ctgacacagctgataatttgaaaaaat 9778524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 473
Target Start/End: Original strand, 24105627 - 24105704
Alignment:
Q  395 ttctctgaagcacggatacgaacacggacaccagacaca-acacggacacgccgacactgctaataatttgagaaaattg 473  Q
    |||| ||||||||||||||| | ||||||||  |||||  |||| ||||||||||||| ||||||||||||| |||||||    
T  24105627 ttctatgaagcacggatacggatacggacac--gacacggacactgacacgccgacacagctaataatttgaaaaaattg 24105704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 443
Target Start/End: Complemental strand, 18213146 - 18213103
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacac 443  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||    
T  18213146 tgaagcacagatacgaacacgaacaccagacacgacacggacac 18213103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 33384688 - 33384617
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||||| || |||||  ||||| ||||| |||| ||||||| | ||||||| |||||||||    
T  33384688 tgaagcacggatacgaatacagacactggacacgacacgaacacaccgacaccgttaataatctgagaaaat 33384617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 471
Target Start/End: Complemental strand, 45056979 - 45056936
Alignment:
Q  428 gacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||| |||||||||| || ||||||||||||||||||||||||    
T  45056979 gacacgacacggacactccaacactgctaataatttgagaaaat 45056936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 443
Target Start/End: Original strand, 5954213 - 5954254
Alignment:
Q  402 aagcacggatacgaacacggacaccagacacaacacggacac 443  Q
    ||||||||||||||||||||||||  ||||| ||||||||||    
T  5954213 aagcacggatacgaacacggacacaggacacgacacggacac 5954254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 32308107 - 32308144
Alignment:
Q  434 acacggacacgccgacactgctaataatttgagaaaat 471  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  32308107 acactgacacgccgacaccgctaataatttgagaaaat 32308144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 471
Target Start/End: Complemental strand, 42720994 - 42720925
Alignment:
Q  402 aagcacggatacgaacacggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||| |||| |||| ||||||  |||| ||||||  ||||| ||||||||||||| |||||    
T  42720994 aagcacggatacggacacagacatcagacatgacactgacacgttgacaccgctaataatttgaaaaaat 42720925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 472
Target Start/End: Original strand, 28155563 - 28155595
Alignment:
Q  440 acacgccgacactgctaataatttgagaaaatt 472  Q
    |||||||||||| ||||||||||||||||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaatt 28155595  T

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Target: scaffold0168 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 443
Target Start/End: Original strand, 20990 - 21033
Alignment:
Q  400 tgaagcacggatacgaacacggacaccagacacaacacggacac 443  Q
    |||| ||| |||||||||||||||||||||||| ||||||||||    
T  20990 tgaaacacagatacgaacacggacaccagacacgacacggacac 21033  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 434 - 472
Target Start/End: Original strand, 92794 - 92832
Alignment:
Q  434 acacggacacgccgacactgctaataatttgagaaaatt 472  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  92794 acactgacacgccgacaccgctaataatttgagaaaatt 92832  T

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Target: scaffold0279 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 471
Target Start/End: Complemental strand, 17976 - 17905
Alignment:
Q  400 tgaagcacggatacgaacac-ggacaccagacacaacacggacacgccgacactgctaataatttgagaaaat 471  Q
    ||||||||||||||| |||| |||||| | ||| |||||  ||||||| |||| |||||||||||||||||||    
T  17976 tgaagcacggatacggacactggacacgataca-aacaccaacacgcctacaccgctaataatttgagaaaat 17905  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 71694 - 71746
Alignment:
Q  418 acggacaccagacacaacacggacacgccgacactgctaataatttgagaaaa 470  Q
    ||||||| | ||||| |||| ||||||||||||| ||||||||||||| ||||    
T  71694 acggacatcggacacgacactgacacgccgacacagctaataatttgaaaaaa 71746  T

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