View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14228_low_8 (Length: 340)

Name: NF14228_low_8
Description: NF14228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14228_low_8
NF14228_low_8
[»] chr8 (33 HSPs)
chr8 (181-321)||(7458179-7458319)
chr8 (181-321)||(7470581-7470721)
chr8 (16-149)||(7468273-7468406)
chr8 (181-318)||(6320528-6320665)
chr8 (181-318)||(6330990-6331127)
chr8 (186-318)||(6409334-6409466)
chr8 (181-318)||(6273649-6273786)
chr8 (181-318)||(6390077-6390214)
chr8 (186-292)||(6369100-6369206)
chr8 (186-319)||(6351443-6351576)
chr8 (181-318)||(6362323-6362460)
chr8 (181-317)||(6423355-6423491)
chr8 (16-139)||(20707760-20707885)
chr8 (31-149)||(23118907-23119024)
chr8 (181-318)||(6287900-6288037)
chr8 (16-149)||(22499371-22499506)
chr8 (16-149)||(23216628-23216762)
chr8 (31-149)||(33170241-33170358)
chr8 (17-139)||(18043228-18043352)
chr8 (29-149)||(17264484-17264604)
chr8 (205-277)||(6449911-6449983)
chr8 (31-139)||(45561782-45561890)
chr8 (20-152)||(25607876-25608009)
chr8 (31-93)||(22317491-22317553)
chr8 (20-138)||(29295858-29295974)
chr8 (204-265)||(6456377-6456438)
chr8 (36-89)||(18263530-18263583)
chr8 (31-139)||(17499847-17499955)
chr8 (31-101)||(11541997-11542067)
chr8 (31-137)||(24554653-24554759)
chr8 (31-93)||(37655766-37655827)
chr8 (32-93)||(15931316-15931376)
chr8 (31-136)||(22311046-22311151)
[»] scaffold0004 (2 HSPs)
scaffold0004 (31-149)||(84413-84531)
scaffold0004 (32-137)||(25543-25648)
[»] chr7 (17 HSPs)
chr7 (32-149)||(4482259-4482376)
chr7 (16-149)||(17948092-17948227)
chr7 (31-139)||(9323134-9323242)
chr7 (16-149)||(9641024-9641159)
chr7 (33-138)||(4436880-4436985)
chr7 (33-137)||(4444281-4444385)
chr7 (16-107)||(16381885-16381977)
chr7 (31-93)||(21677619-21677680)
chr7 (31-93)||(33555665-33555727)
chr7 (31-136)||(12245681-12245786)
chr7 (16-136)||(18081378-18081499)
chr7 (32-89)||(18921191-18921248)
chr7 (32-93)||(28388455-28388516)
chr7 (32-137)||(31499238-31499343)
chr7 (31-136)||(39294231-39294336)
chr7 (32-136)||(17922977-17923081)
chr7 (32-95)||(28718036-28718099)
[»] chr5 (11 HSPs)
chr5 (31-139)||(23236485-23236593)
chr5 (32-139)||(5623493-5623600)
chr5 (32-137)||(24082105-24082211)
chr5 (205-318)||(9605992-9606105)
chr5 (31-136)||(20456641-20456746)
chr5 (32-139)||(3420907-3421014)
chr5 (36-139)||(26561862-26561965)
chr5 (31-135)||(16837814-16837918)
chr5 (31-149)||(11963585-11963703)
chr5 (16-139)||(19871886-19872010)
chr5 (32-138)||(24228017-24228122)
[»] chr1 (13 HSPs)
chr1 (31-139)||(5770272-5770380)
chr1 (9-149)||(33383887-33384029)
chr1 (31-149)||(40555365-40555482)
chr1 (31-149)||(41213725-41213843)
chr1 (20-137)||(29217134-29217252)
chr1 (32-154)||(21193153-21193274)
chr1 (32-137)||(46143769-46143875)
chr1 (31-137)||(9293476-9293583)
chr1 (16-130)||(78576-78692)
chr1 (31-139)||(21041782-21041890)
chr1 (32-139)||(5472468-5472575)
chr1 (32-89)||(18164201-18164257)
chr1 (83-139)||(40438407-40438463)
[»] chr3 (19 HSPs)
chr3 (31-149)||(43429604-43429722)
chr3 (31-152)||(6817696-6817817)
chr3 (23-136)||(10902461-10902574)
chr3 (16-139)||(22637304-22637427)
chr3 (32-139)||(21168780-21168887)
chr3 (36-139)||(41659610-41659713)
chr3 (32-139)||(12950562-12950668)
chr3 (32-137)||(4164321-4164427)
chr3 (16-149)||(17320644-17320778)
chr3 (35-137)||(4147769-4147872)
chr3 (32-139)||(33371440-33371546)
chr3 (31-149)||(15551962-15552080)
chr3 (31-136)||(37918959-37919064)
chr3 (31-139)||(5230688-5230796)
chr3 (16-93)||(31416339-31416417)
chr3 (78-149)||(17760870-17760941)
chr3 (78-149)||(19062190-19062261)
chr3 (31-136)||(8602295-8602400)
chr3 (32-137)||(18968068-18968172)
[»] chr6 (7 HSPs)
chr6 (16-149)||(15006696-15006831)
chr6 (17-139)||(34964905-34965029)
chr6 (16-149)||(22468174-22468309)
chr6 (32-139)||(12311080-12311186)
chr6 (31-92)||(19670525-19670586)
chr6 (32-137)||(29603566-29603671)
chr6 (31-139)||(22595736-22595844)
[»] chr4 (8 HSPs)
chr4 (31-149)||(50224222-50224340)
chr4 (31-139)||(47470409-47470518)
chr4 (16-149)||(13596086-13596221)
chr4 (31-137)||(10239519-10239625)
chr4 (20-132)||(19557309-19557421)
chr4 (32-89)||(13449139-13449196)
chr4 (32-93)||(5407163-5407223)
chr4 (32-90)||(18241312-18241370)
[»] chr2 (6 HSPs)
chr2 (16-149)||(6092425-6092559)
chr2 (32-139)||(24272039-24272146)
chr2 (64-149)||(25132242-25132326)
chr2 (31-89)||(30995105-30995163)
chr2 (225-277)||(42689386-42689438)
chr2 (204-265)||(42692389-42692450)
[»] scaffold0561 (1 HSPs)
scaffold0561 (31-136)||(4820-4925)
[»] scaffold0003 (1 HSPs)
scaffold0003 (32-137)||(99138-99243)
[»] scaffold0442 (2 HSPs)
scaffold0442 (16-139)||(2044-2172)
scaffold0442 (16-68)||(14254-14308)
[»] scaffold0480 (1 HSPs)
scaffold0480 (32-128)||(11086-11182)
[»] scaffold0148 (1 HSPs)
scaffold0148 (32-89)||(35914-35971)
[»] scaffold0009 (1 HSPs)
scaffold0009 (31-136)||(99019-99124)
[»] scaffold0193 (1 HSPs)
scaffold0193 (32-139)||(2935-3041)
[»] scaffold0133 (1 HSPs)
scaffold0133 (32-89)||(3808-3865)
[»] scaffold0047 (1 HSPs)
scaffold0047 (31-136)||(73362-73467)
[»] scaffold0219 (1 HSPs)
scaffold0219 (58-137)||(26045-26125)
[»] scaffold0021 (2 HSPs)
scaffold0021 (44-139)||(19889-19983)
scaffold0021 (44-139)||(29465-29559)
[»] scaffold0115 (1 HSPs)
scaffold0115 (31-141)||(19330-19440)
[»] scaffold0001 (1 HSPs)
scaffold0001 (32-89)||(141379-141437)
[»] scaffold0387 (1 HSPs)
scaffold0387 (41-137)||(3101-3198)
[»] scaffold0327 (1 HSPs)
scaffold0327 (43-139)||(6961-7056)
[»] scaffold0151 (1 HSPs)
scaffold0151 (83-139)||(31717-31773)
[»] scaffold0010 (1 HSPs)
scaffold0010 (31-118)||(123520-123607)
[»] scaffold0174 (1 HSPs)
scaffold0174 (20-90)||(552-624)
[»] scaffold0165 (1 HSPs)
scaffold0165 (32-89)||(20136-20193)
[»] scaffold0107 (1 HSPs)
scaffold0107 (20-139)||(11416-11536)
[»] scaffold0020 (1 HSPs)
scaffold0020 (32-93)||(103976-104035)
[»] scaffold0138 (1 HSPs)
scaffold0138 (75-139)||(18665-18728)


Alignment Details
Target: chr8 (Bit Score: 133; Significance: 4e-69; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 181 - 321
Target Start/End: Original strand, 7458179 - 7458319
Alignment:
Q  181 tagtggaaattcagatattcatcaacccatgacttaatagcagcccatatctctagtccatcagaagcataaggatagtcctctatcagaagtcgaacac 280  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7458179 tagtagaaattcacatattcatcaacccatgacttaatagcagcccatatctctagtccatcagaagcataaggatagtcctctatcagaagtcgaacac 7458278  T
Q  281 catgtggagaagctggatcctgaactgccactcctctaatt 321  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7458279 catgtggagaagctggatcctgaactgccactcctctaatt 7458319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 181 - 321
Target Start/End: Original strand, 7470581 - 7470721
Alignment:
Q  181 tagtggaaattcagatattcatcaacccatgacttaatagcagcccatatctctagtccatcagaagcataaggatagtcctctatcagaagtcgaacac 280  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7470581 tagtagaaattcacatattcatcaacccatgacttaatagcagcccatatctctagtccatcagaaacataaggatagtcctctatcagaagtcgaacac 7470680  T
Q  281 catgtggagaagctggatcctgaactgccactcctctaatt 321  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7470681 catgtggagaagctggatcctgaactgccactcctctaatt 7470721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 7468273 - 7468406
Alignment:
Q  16 atccaaacaacaagcatataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattata 115  Q
    ||||||||||||  ||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||    
T  7468273 atccaaacaacagacatataaaaattctcaacagttgcagcggatataaaccacacacttcaaaagaatacatgccatgaaatcaagatacaacatcata 7468372  T
Q  116 aaagttctccaaatcccgacaaatagacaaatct 149  Q
    |||||||||||||||||||||||| | |||||||    
T  7468373 aaagttctccaaatcccgacaaatgggcaaatct 7468406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 181 - 318
Target Start/End: Original strand, 6320528 - 6320665
Alignment:
Q  181 tagtggaaattcagatattcatcaacccatgacttaatagcagcccatatctctagtccatcagaagcataaggatagtcctctatcagaagtcgaacac 280  Q
    |||| |||||||| |||||| |||||||||||||| |||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||  |    
T  6320528 tagtagaaattcacatattcttcaacccatgacttgatagcatcccatatctctagtccatcagcagcataagggtagtcctctatcagaaggcgaattc 6320627  T
Q  281 catgtggagaagctggatcctgaactgccactcctcta 318  Q
    ||||||| |||| |||||||| ||| ||||||||||||    
T  6320628 catgtggggaagttggatcctcaacagccactcctcta 6320665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 181 - 318
Target Start/End: Original strand, 6330990 - 6331127
Alignment:
Q  181 tagtggaaattcagatattcatcaacccatgacttaatagcagcccatatctctagtccatcagaagcataaggatagtcctctatcagaagtcgaacac 280  Q
    |||| |||| ||| |||||| |||||||||||||| |||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||  |    
T  6330990 tagtagaaactcacatattcttcaacccatgacttgatagcatcccatatctctagtccatcagcagcataagggtagtcctctatcagaaggcgaattc 6331089  T
Q  281 catgtggagaagctggatcctgaactgccactcctcta 318  Q
    ||||||| |||| |||||||| ||| ||||||||||||    
T  6331090 catgtggggaagttggatcctcaacagccactcctcta 6331127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 186 - 318
Target Start/End: Original strand, 6409334 - 6409466
Alignment:
Q  186 gaaattcagatattcatcaacccatgacttaatagcagcccatatctctagtccatcagaagcataaggatagtcctctatcagaagtcgaacaccatgt 285  Q
    |||||| | |||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||| ||| ||||||||||||    
T  6409334 gaaatttacatattcttcaacccatgacttaatagcagcccatatctctaatccatcagtagcataaggataatcctctatcaaaaggcgaacaccatgt 6409433  T
Q  286 ggagaagctggatcctgaactgccactcctcta 318  Q
    ||| |   |||||||| ||| ||||||||||||    
T  6409434 ggaaattttggatccttaacagccactcctcta 6409466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 181 - 318
Target Start/End: Original strand, 6273649 - 6273786
Alignment:
Q  181 tagtggaaattcagatattcatcaacccatgacttaatagcagcccatatctctagtccatcagaagcataaggatagtcctctatcagaagtcgaacac 280  Q
    |||| |||||||| |||||| |||||||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||||||||| ||||  |    
T  6273649 tagtagaaattcacatattcttcaacccatgacttaataacagcccatatctctaatccatcagcagcataagggtagtcctctatcagaaggcgaaggc 6273748  T
Q  281 catgtggagaagctggatcctgaactgccactcctcta 318  Q
    | ||||| |||  |||||||| ||| ||||||||||||    
T  6273749 cgtgtggggaacttggatccttaacagccactcctcta 6273786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 181 - 318
Target Start/End: Original strand, 6390077 - 6390214
Alignment:
Q  181 tagtggaaattcagatattcatcaacccatgacttaatagcagcccatatctctagtccatcagaagcataaggatagtcctctatcagaagtcgaacac 280  Q
    |||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||| || | ||    
T  6390077 tagtagaaattgacatattcatcaacccatgacttaatagcagcccatatctctagtccatcaacagcatatggataatcctctatcagaagacgcagac 6390176  T
Q  281 catgtggagaagctggatcctgaactgccactcctcta 318  Q
    ||||||||||   |||||||| ||| ||||| ||||||    
T  6390177 catgtggagattttggatccttaacagccacacctcta 6390214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 186 - 292
Target Start/End: Original strand, 6369100 - 6369206
Alignment:
Q  186 gaaattcagatattcatcaacccatgacttaatagcagcccatatctctagtccatcagaagcataaggatagtcctctatcagaagtcgaacaccatgt 285  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||| || | |||||||    
T  6369100 gaaattgacatattcatcaacccatgacttaatagcagcccatatctctagtccatctgaagcatatggataatcctctatcagaagacgcagaccatgt 6369199  T
Q  286 ggagaag 292  Q
    || ||||    
T  6369200 ggggaag 6369206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 186 - 319
Target Start/End: Original strand, 6351443 - 6351576
Alignment:
Q  186 gaaattcagatattcatcaacccatgacttaatagcagcccatatctctagtccatcagaagcataaggatagtcctctatcagaagtcgaacaccatgt 285  Q
    |||||||| ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| || | |||        
T  6351443 gaaattcacatattcaccaacccatgacttaatggcagcccatatttctagtccatcagaagcataaggataatcctctatcagaaggcggagaccggta 6351542  T
Q  286 ggagaagctggatcctgaactgccactcctctaa 319  Q
    ||||| |||||||||| ||| || ||||||||||    
T  6351543 ggagaggctggatcctcaacagctactcctctaa 6351576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 181 - 318
Target Start/End: Original strand, 6362323 - 6362460
Alignment:
Q  181 tagtggaaattcagatattcatcaacccatgacttaatagcagcccatatctctagtccatcagaagcataaggatagtcctctatcagaagtcgaacac 280  Q
    |||| |||||| | |||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||| ||    
T  6362323 tagtagaaattgacatattcatcaacccatgatttaatagcagcccatatttctagtccatctgaagcataagggtagtcctctattagaagtcgaagac 6362422  T
Q  281 catgtggagaagctggatcctgaactgccactcctcta 318  Q
    ||| ||  ||||  || |||| ||| ||||||||||||    
T  6362423 catatgctgaagtagggtcctcaacggccactcctcta 6362460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 181 - 317
Target Start/End: Original strand, 6423355 - 6423491
Alignment:
Q  181 tagtggaaattcagatattcatcaacccatgacttaatagcagcccatatctctagtccatcagaagcataaggatagtcctctatcagaagtcgaacac 280  Q
    |||| |||| ||| ||||||  ||||||||| ||| |||||||||||||||||||||||||| |||||||||||||| ||||| |||| ||| ||||  |    
T  6423355 tagtagaaactcacatattctccaacccatgtcttgatagcagcccatatctctagtccatccgaagcataaggataatcctcaatcaaaaggcgaatgc 6423454  T
Q  281 catgtggagaagctggatcctgaactgccactcctct 317  Q
    | ||||| ||||||||||||| ||| |||||||||||    
T  6423455 cgtgtggtgaagctggatcctcaacagccactcctct 6423491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 20707760 - 20707885
Alignment:
Q  16 atccaaacaacaagcatat--aaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacatta 113  Q
    |||||||||||| ||||||  |||||||||||||||||  ||| |||| |||||| |||| ||||||||||||||| ||||| ||||| ||||||||| |    
T  20707760 atccaaacaacatgcatatataaaaattctcaacagttgcagcagatagaaaccatacacctcaaaagtatacatgacataagatcaaaatacaacatca 20707859  T
Q  114 taaaagttctccaaatcccgacaaat 139  Q
    ||||| |||| |||||||||||||||    
T  20707860 taaaaattcttcaaatcccgacaaat 20707885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 23119024 - 23118907
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    ||||||||||||||||||||   |||||||||||| || |||| ||||| ||||||||||||| | ||||| ||||||||| |||||| || ||||||||    
T  23119024 atataaaaattctcaacagtcgcagcggatataaatcatacacctcaaa-gtatacatgccatgagatcaaaatacaacatcataaaaattatccaaatc 23118926  T
Q  131 ccgacaaatagacaaatct 149  Q
    ||||||||| | |||||||    
T  23118925 ccgacaaatgggcaaatct 23118907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 181 - 318
Target Start/End: Original strand, 6287900 - 6288037
Alignment:
Q  181 tagtggaaattcagatattcatcaacccatgacttaatagcagcccatatctctagtccatcagaagcataaggatagtcctctatcagaagtcgaacac 280  Q
    |||| ||||| || |||||| ||||||||||||||||| || | ||||||||||| |||||||| ||||||||| || || | ||||||||| ||||  |    
T  6287900 tagtagaaatacacatattcttcaacccatgacttaattgctgtccatatctctaatccatcagcagcataagggtaatcttttatcagaaggcgaaggc 6287999  T
Q  281 catgtggagaagctggatcctgaactgccactcctcta 318  Q
    | ||||| |||| |||||||| ||| ||||||||||||    
T  6288000 cgtgtggggaagttggatcctcaacagccactcctcta 6288037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 22499506 - 22499371
Alignment:
Q  16 atccaaacaacaagcatata--aaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacatta 113  Q
    |||||||||||| |||||||  ||||||||||||||||  |||||||||| | || |||  || ||||| |||||||||| | ||||| |||||| || |    
T  22499506 atccaaacaacaggcatatataaaaattctcaacagttgcagcggatatagatcatacatctccaaagtctacatgccatgagatcaaaatacaatatca 22499407  T
Q  114 taaaagttctccaaatcccgacaaatagacaaatct 149  Q
    ||||| |||||||||||||||||||| | |||||||    
T  22499406 taaaaattctccaaatcccgacaaatgggcaaatct 22499371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 23216628 - 23216762
Alignment:
Q  16 atccaaacaacaagcatata--aaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacatta 113  Q
    |||||||||||| |||||||  ||||||||||||||||  ||| ||||||||||| |||| ||||| ||||||||||||| | ||||| ||||| ||| |    
T  23216628 atccaaacaacatgcatatataaaaattctcaacagttgcagctgatataaaccatacacctcaaa-gtatacatgccatgagatcaaaatacatcatca 23216726  T
Q  114 taaaagttctccaaatcccgacaaatagacaaatct 149  Q
    ||||| |||||||  ||||||||||| | |||||||    
T  23216727 taaaaattctccatttcccgacaaatgggcaaatct 23216762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 33170241 - 33170358
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    ||||||||| |||||| ||||  ||| |||||||| || |||| ||||||||||||||| ||| | ||||| ||||| ||| |||||| |||||||||||    
T  33170241 atataaaaaatctcaatagttgcagcagatataaatcatacacctcaaaagtatacatgtcatgagatcaaaatacatcatcataaaa-ttctccaaatc 33170339  T
Q  131 ccgacaaatagacaaatct 149  Q
    ||||||||| |||||||||    
T  33170340 ccgacaaatggacaaatct 33170358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 18043352 - 18043228
Alignment:
Q  17 tccaaacaacaagcatata--aaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattat 114  Q
    ||||||||||| |||||||  ||||||||||||||||  ||  |||||||| || |||| ||||||||||||||||||| |  |||| ||||| ||| ||    
T  18043352 tccaaacaacaggcatatataaaaattctcaacagttgcagaagatataaatcatacacctcaaaagtatacatgccatgaggtcaaaatacatcatcat 18043253  T
Q  115 aaaagttctccaaatcccgacaaat 139  Q
    |||  ||||||||||||||||||||    
T  18043252 aaagattctccaaatcccgacaaat 18043228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 17264484 - 17264604
Alignment:
Q  29 gcatataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaa 128  Q
    |||||||||||| |||||||||   |||||||||||| || |||  || |||||||||||||||| | ||||| ||||| ||| ||| || |||||||||    
T  17264484 gcatataaaaatcctcaacagtcgcagcggatataaatcatacatctccaaagtatacatgccatgagatcaaaatacatcatcatataaattctccaaa 17264583  T
Q  129 tcccgacaaatagacaaatct 149  Q
    ||||||||||| | |||||||    
T  17264584 tcccgacaaatgggcaaatct 17264604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 6449911 - 6449983
Alignment:
Q  205 acccatgacttaatagcagcccatatctctagtccatcagaagcataaggatagtcctctatcagaagtcgaa 277  Q
    ||||||| |||||||||| ||||||| ||||||||||||  ||||||||| ||||||||||||| ||||||||    
T  6449911 acccatgccttaatagcatcccatatttctagtccatcaacagcataagggtagtcctctatcacaagtcgaa 6449983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 45561890 - 45561782
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    |||| |||||| ||||||||   | |||||||||| || |||| |||| |||||||||||||  | ||||| ||||| ||| ||| || |||||||||||    
T  45561890 atattaaaattatcaacagtcgcatcggatataaatcatacacctcaagagtatacatgccaagagatcaaaatacatcatcatataaattctccaaatc 45561791  T
Q  131 ccgacaaat 139  Q
    |||||||||    
T  45561790 ccgacaaat 45561782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 25607876 - 25608009
Alignment:
Q  20 aaacaacaagcatataaaaatt--ctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaa 117  Q
    |||||||| ||||||| |||||  |||||||||   |||||||||||| || |||  ||||| ||||||||||||| | ||||| ||||| ||| |||      
T  25607876 aaacaacatgcatatataaattttctcaacagtcgcagcggatataaatcatacatctcaaa-gtatacatgccatgagatcaaaatacatcatcatatc 25607974  T
Q  118 agttctccaaatcccgacaaatagacaaatcttca 152  Q
    | |||||||||||||||||| | | ||||||||||    
T  25607975 aattctccaaatcccgacaattgggcaaatcttca 25608009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 22317491 - 22317553
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccat 93  Q
    ||||||||||||||||||||   |||||||||||| || | || |||||||||||||||||||    
T  22317491 atataaaaattctcaacagtggcagcggatataaatcatatacctcaaaagtatacatgccat 22317553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 29295858 - 29295974
Alignment:
Q  20 aaacaacaagcatataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaag 119  Q
    |||||||| |||| || ||| ||||||||||   ||||||||||||||| | ||||| |||||||||||| ||| | ||||| |||||  || |||||||    
T  29295858 aaacaacatgcatgtataaaatctcaacagtcgcagcggatataaaccatatacttc-aaagtatacatgtcatgatatcaa-atacataatcataaaag 29295955  T
Q  120 ttctccaaatcccgacaaa 138  Q
    |||||||| | ||||||||    
T  29295956 ttctccaagttccgacaaa 29295974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 6456377 - 6456438
Alignment:
Q  204 aacccatgacttaatagcagcccatatctctagtccatcagaagcataaggatagtcctcta 265  Q
    |||||||| |||||||||| ||||||| ||||||||||||  ||||||||| ||||| ||||    
T  6456377 aacccatgccttaatagcatcccatatttctagtccatcaacagcataagggtagtcttcta 6456438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 18263583 - 18263530
Alignment:
Q  36 aaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatg 89  Q
    |||||||||||||||   ||||||||||||||| |||| |||||||||||||||    
T  18263583 aaaattctcaacagtcgcagcggatataaaccatacacctcaaaagtatacatg 18263530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 17499847 - 17499955
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    |||||||| |||||||||||   |||||||||||| || |||  || ||| ||||||||||||  |||||| ||||| ||| ||| || |||||| ||||    
T  17499847 atataaaatttctcaacagtcgcagcggatataaatcatacatctccaaaatatacatgccatgcaatcaaaatacatcatcatataaattctccgaatc 17499946  T
Q  131 ccgacaaat 139  Q
    || ||||||    
T  17499947 ccaacaaat 17499955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 11541997 - 11542067
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaa 101  Q
    ||||||||||||||||||||  || |||||||||| || |||  || |||||||||||| ||||| |||||    
T  11541997 atataaaaattctcaacagtcgtaacggatataaatcatacatctccaaagtatacatgtcataagatcaa 11542067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 24554759 - 24554653
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    ||||||||||| ||||||||   |||||||||||| || |||  || |||||||||||||||| | ||||| ||||| ||| ||| || |||||  |||     
T  24554759 atataaaaattatcaacagtcgcagcggatataaatcatacatctccaaagtatacatgccatgagatcaaaatacatcatcatataaattctctgaatt 24554660  T
Q  131 ccgacaa 137  Q
    |||||||    
T  24554659 ccgacaa 24554653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 37655827 - 37655766
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccat 93  Q
    ||||||||||||||||||||   ||||||||||||||| | ||||| |||| |||||||||||    
T  37655827 atataaaaattctcaacagtcgcagcggatataaaccatatacttc-aaagcatacatgccat 37655766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 15931316 - 15931376
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccat 93  Q
    |||||||||||||||||||   ||||||||||||||| | ||||| |||| |||||||||||    
T  15931316 tataaaaattctcaacagtcgcagcggatataaaccatatacttc-aaagcatacatgccat 15931376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 136
Target Start/End: Original strand, 22311046 - 22311151
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    ||||||||||||||||| ||   | | |||||||| || |||| |||||||||| |||| ||| | ||||| ||||| ||| ||  || |||||||||||    
T  22311046 atataaaaattctcaaccgtcccaactgatataaatcatacacctcaaaagtattcatgtcatgagatcaaaatacatcatcatgtaaattctccaaatc 22311145  T
Q  131 ccgaca 136  Q
    ||||||    
T  22311146 ccgaca 22311151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 84413 - 84531
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    |||||||||||||||| |||| ||||||||||||| || |||| ||||| ||||||| ||||| |||| |||||||||||| ||||||||||||||||||    
T  84413 atataaaaattctcaaaagttgtagcggatataaatcatacacctcaaatgtatacacgccatgaaattaagatacaacatcataaaagttctccaaatc 84512  T
Q  131 ccgacaaatagacaaatct 149  Q
    ||||||||| | |||||||    
T  84513 ccgacaaatgggcaaatct 84531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 137
Target Start/End: Original strand, 25543 - 25648
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcc 131  Q
    |||||||||||||||||||   | || |||||||||| |||||||||||| ||||||||||| |  |||| ||||| ||| |||||| ||||||||||||    
T  25543 tataaaaattctcaacagtagcaacgaatataaaccatacacttcaaaagcatacatgccatgaggtcaaaatacatcatcataaaaattctccaaatcc 25642  T
Q  132 cgacaa 137  Q
     |||||    
T  25643 tgacaa 25648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 4482259 - 4482376
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcc 131  Q
    |||||||| | |||||||||  ||||||||||||||| | |||| ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  4482259 tataaaaaatttcaacagttgcagcggatataaaccatatactttaaaagcatacatgccatgaaatcaagatacaacatcataaaagttctccaaatcc 4482358  T
Q  132 cgacaaatagacaaatct 149  Q
    |||||||| | |||||||    
T  4482359 cgacaaatgggcaaatct 4482376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 17948227 - 17948092
Alignment:
Q  16 atccaaacaacaagcatata--aaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacatta 113  Q
    |||||||||||| |||||||  ||||||||||||||||  |||||||||||| || |||| ||||||||||||||| ||| | ||||| ||||| ||| |    
T  17948227 atccaaacaacatgcatatataaaaattctcaacagttgcagcggatataaatcatacacctcaaaagtatacatgacatgagatcaaaatacatcatca 17948128  T
Q  114 taaaagttctccaaatcccgacaaatagacaaatct 149  Q
    ||||| |||||||||||||||||||| | |||||||    
T  17948127 taaaaattctccaaatcccgacaaatgggcaaatct 17948092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 9323242 - 9323134
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    ||||||||||| |||||||||  ||||||||||||||| |||| ||||||||||||||||||| | ||||| ||||| ||  |||||| || | ||||||    
T  9323242 atataaaaattatcaacagttgcagcggatataaaccatacacctcaaaagtatacatgccatgagatcaaaatacatcaacataaaaattattcaaatc 9323143  T
Q  131 ccgacaaat 139  Q
    |||||||||    
T  9323142 ccgacaaat 9323134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 9641024 - 9641159
Alignment:
Q  16 atccaaacaacaagcatat--aaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacatta 113  Q
    |||||||||||| ||||||  ||||||| |||||||||  | |||||||| | || |||  || ||||| |||||||||| | ||||| ||||||||| |    
T  9641024 atccaaacaacaggcatatataaaaattttcaacagttgcatcggatatagatcatacatctccaaagtctacatgccatgagatcaaaatacaacatca 9641123  T
Q  114 taaaagttctccaaatcccgacaaatagacaaatct 149  Q
    ||||| ||||||||||||||| |||| | |||||||    
T  9641124 taaaaattctccaaatcccgataaatgggcaaatct 9641159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 138
Target Start/End: Original strand, 4436880 - 4436985
Alignment:
Q  33 ataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatccc 132  Q
    |||| ||||||||||||||  | | ||||||||||| |||| ||| || |||||||||||||| ||||  | | ||||| || ||| |||||||||||||    
T  4436880 ataataattctcaacagttgcaacagatataaaccatacacctcacaaatatacatgccataagatcataaaataacatcatgaaaattctccaaatccc 4436979  T
Q  133 gacaaa 138  Q
    ||||||    
T  4436980 gacaaa 4436985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 137
Target Start/End: Original strand, 4444281 - 4444385
Alignment:
Q  33 ataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatccc 132  Q
    |||| ||||||||||||||  ||| ||||||||| | |||| ||| || |||||||||||||| ||||  | ||||||| || ||| |||| ||||||||    
T  4444281 ataataattctcaacagttgcagcagatataaacgatacacctcacaaatatacatgccataatatcataaaacaacatcatgaaaattcttcaaatccc 4444380  T
Q  133 gacaa 137  Q
    |||||    
T  4444381 gacaa 4444385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 16381885 - 16381977
Alignment:
Q  16 atccaaacaacaagcatataaaaa--ttctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagataca 107  Q
    |||||||||||| ||||||| |||  || |||||||||  || |||||||||||| ||||||| |||||||||||||||| | ||||| |||||    
T  16381885 atccaaacaacaggcatatagaaaatttttcaacagttgcagtggatataaaccatacacttc-aaagtatacatgccatgagatcaaaataca 16381977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 21677680 - 21677619
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccat 93  Q
    |||||| ||||||||||||||  ||||||||||||||| |||| || ||||||||||||||||    
T  21677680 atataagaattctcaacagttgcagcggatataaaccatacacctc-aaagtatacatgccat 21677619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 33555665 - 33555727
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccat 93  Q
    ||||||||| ||||||||||   ||||| ||||||||| |||| |||||||||||||||||||    
T  33555665 atataaaaactctcaacagtcgcagcgggtataaaccatacacctcaaaagtatacatgccat 33555727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 136
Target Start/End: Original strand, 12245681 - 12245786
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    |||||||| |||||||||||   |||||||||||| || |||  || ||| |||||||| ||||| ||||| ||||| ||| ||| ||  ||||||||||    
T  12245681 atataaaatttctcaacagtcgcagcggatataaatcatacatctccaaaatatacatgtcataagatcaatatacatcatcatataaaatctccaaatc 12245780  T
Q  131 ccgaca 136  Q
    ||||||    
T  12245781 ccgaca 12245786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 18081499 - 18081378
Alignment:
Q  16 atccaaacaacaagcatata-aaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattat 114  Q
    |||||||||||| | ||||| ||||||||||| ||||  |||||||||| | || |||  ||  | || |||||||||| | ||||| ||||||||| ||    
T  18081499 atccaaacaacatgtatatataaaattctcaatagttgcagcggatatagatcatacatctcctaggtctacatgccatgagatcaaaatacaacatcat 18081400  T
Q  115 aaaagttctccaaatcccgaca 136  Q
    | || |||||||||||||||||    
T  18081399 ataaattctccaaatcccgaca 18081378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 18921248 - 18921191
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatg 89  Q
    |||||||||||||||||||   ||||||||||||||| |||| |||||| ||||||||    
T  18921248 tataaaaattctcaacagtcgcagcggatataaaccatacacctcaaaattatacatg 18921191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 28388455 - 28388516
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccat 93  Q
    ||||||||||||||| ||||  |||||||||||| || |||| |||| ||||||||||||||    
T  28388455 tataaaaattctcaatagttgcagcggatataaatcatacacctcaagagtatacatgccat 28388516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 137
Target Start/End: Original strand, 31499238 - 31499343
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcc 131  Q
    |||||||||||| ||||||   |||||||||||| || |||| |||||||||| |||| ||| | ||||| ||| | ||  |||||| ||||| ||||||    
T  31499238 tataaaaattcttaacagtcgcagcggatataaatcatacacctcaaaagtatgcatgtcatgatatcaaaatatatcaacataaaaattctcaaaatcc 31499337  T
Q  132 cgacaa 137  Q
    ||||||    
T  31499338 cgacaa 31499343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 136
Target Start/End: Complemental strand, 39294336 - 39294231
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    ||||||||||||||||||||   |||||||||||| || |||  || |||||||||||||||| | ||||| ||||| ||| ||| || |||| ||| |     
T  39294336 atataaaaattctcaacagtcgcagcggatataaatcatacatatccaaagtatacatgccatgagatcaaaatacatcatcatataaattcttcaagta 39294237  T
Q  131 ccgaca 136  Q
    ||||||    
T  39294236 ccgaca 39294231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 17922977 - 17923081
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcc 131  Q
    |||||||||| ||||||||   |||||||||||| || |||  || |||||||||||| ||| | ||||| ||||| ||| ||| || ||||||||||||    
T  17922977 tataaaaattttcaacagtcgcagcggatataaatcatacatctctaaagtatacatgtcatgagatcaaaatacatcatcatataaattctccaaatcc 17923076  T
Q  132 cgaca 136  Q
     ||||    
T  17923077 tgaca 17923081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 28718036 - 28718099
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataa 95  Q
    |||||||||||||||||||   || |||||||||||| |||| || |||||||||||| |||||    
T  28718036 tataaaaattctcaacagtcgcagtggatataaaccatacacctccaaagtatacatgtcataa 28718099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 6e-31; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 23236593 - 23236485
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    |||||||||||||||||||||  |||||||||||| || |||| ||||||||||||||||||| | ||||| ||||||||| |||||| |||||||||||    
T  23236593 atataaaaattctcaacagttgcagcggatataaatcatacacctcaaaagtatacatgccatgagatcaaaatacaacatcataaaaattctccaaatc 23236494  T
Q  131 ccgacaaat 139  Q
    |||||||||    
T  23236493 ccgacaaat 23236485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 5623600 - 5623493
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcc 131  Q
    ||||||||||||||||||||  |||||||||||| || |||| |||| |||||||||| ||| | ||||  ||||| ||| |||||| ||||||||||||    
T  5623600 tataaaaattctcaacagttgcagcggatataaatcatacacatcaatagtatacatgtcatgatatcacaatacatcatcataaaaattctccaaatcc 5623501  T
Q  132 cgacaaat 139  Q
    ||||||||    
T  5623500 cgacaaat 5623493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 32 - 137
Target Start/End: Original strand, 24082105 - 24082211
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctcc-aaatc 130  Q
    ||||||||||||||||||||  ||||||||||||||| | | |||||||||||||||| ||| | ||||| ||||| ||| || ||| |||||| |||||    
T  24082105 tataaaaattctcaacagttgcagcggatataaaccatataattcaaaagtatacatgacatgatatcaaaatacatcatcatcaaaattctccaaaatc 24082204  T
Q  131 ccgacaa 137  Q
    |||||||    
T  24082205 ccgacaa 24082211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 318
Target Start/End: Complemental strand, 9606105 - 9605992
Alignment:
Q  205 acccatgacttaatagcagcccatatctctagtccatcagaagcataaggatagtcctctatcagaagtcgaacaccatgtggagaagctggatcctgaa 304  Q
    |||||||||||||||||| |||||||||| |||||||||   |||||||| |||||||| |||| ||| ||||  ||||||||||| | |||||||| ||    
T  9606105 acccatgacttaatagcatcccatatctcgagtccatcaactgcataagggtagtcctcgatcacaagacgaaggccatgtggagacgatggatcctcaa 9606006  T
Q  305 ctgccactcctcta 318  Q
    | || | |||||||    
T  9606005 cggctaatcctcta 9605992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 136
Target Start/End: Complemental strand, 20456746 - 20456641
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    ||||||||||||||||||||   |||||||||||| || |||  || ||| |||||||||||| | ||||| ||||| ||| ||| || |||||||||||    
T  20456746 atataaaaattctcaacagtcacagcggatataaatcatacatctccaaaatatacatgccatgagatcaaaatacatcatcatataaattctccaaatc 20456647  T
Q  131 ccgaca 136  Q
    ||||||    
T  20456646 ccgaca 20456641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 3421014 - 3420907
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcc 131  Q
    ||||||||||||||||| |   ||| |||||||| || |||| ||||||||||||||| ||| | ||||| ||||| |||||||||  || |||| ||||    
T  3421014 tataaaaattctcaacaatcgcagcagatataaatcatacacctcaaaagtatacatgtcatgatatcaaaatacatcattataaattttttccacatcc 3420915  T
Q  132 cgacaaat 139  Q
    ||||||||    
T  3420914 cgacaaat 3420907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 26561965 - 26561862
Alignment:
Q  36 aaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcccgac 135  Q
    |||||||||||||||   |||||||||||| || || | ||||||||||||| ||||| | ||||| || ||  || |||||| ||||||||||||||||    
T  26561965 aaaattctcaacagtcgcagcggatataaatcatactcctcaaaagtatacaagccatgatatcaaaattcattatcataaaatttctccaaatcccgac 26561866  T
Q  136 aaat 139  Q
    ||||    
T  26561865 aaat 26561862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 16837918 - 16837814
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    |||||||||||||||| |||   |||||||||||| |  |||  || ||||| |||||||||||| || || ||||||||| ||| || |||||||||||    
T  16837918 atataaaaattctcaatagtcgcagcggatataaatcttacatctccaaagtctacatgccataagataaaaatacaacatcatataaattctccaaatc 16837819  T
Q  131 ccgac 135  Q
    |||||    
T  16837818 ccgac 16837814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 11963585 - 11963703
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    |||||||||||||||| |||   |||||||||||| || |||  |||||| |||| ||| ||||| ||||| ||||| ||| ||| ||  ||||||||||    
T  11963585 atataaaaattctcaatagtcgcagcggatataaatcatacatctcaaaaatataaatgtcataagatcaatatacatcatcatataaaatctccaaatc 11963684  T
Q  131 ccgacaaatagacaaatct 149  Q
    | ||||||| | |||||||    
T  11963685 ctgacaaatgggcaaatct 11963703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 19871886 - 19872010
Alignment:
Q  16 atccaaacaacaagcatata--aaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacatta 113  Q
    |||||||||||| |||||||  ||||||||||| ||||  ||| |||| | | || |||  || ||||| |||||| ||| | ||||| ||||||||| |    
T  19871886 atccaaacaacaggcatatataaaaattctcaatagttgcagcagatacagatcatacatctccaaagtctacatgtcatgagatcaaaatacaacatca 19871985  T
Q  114 taaaagttctccaaatcccgacaaat 139  Q
    ||||| ||||||||||||||||||||    
T  19871986 taaaa-ttctccaaatcccgacaaat 19872010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 138
Target Start/End: Complemental strand, 24228122 - 24228017
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcc 131  Q
    ||||||||||| |||||||   ||||||||||||||| | ||||| |||| ||||||||||| | ||||| |||||   | |||||| |||||||| |||    
T  24228122 tataaaaattcccaacagtcgcagcggatataaaccatatacttc-aaagcatacatgccatgatatcaaaatacatagtcataaaaattctccaagtcc 24228024  T
Q  132 cgacaaa 138  Q
    |||||||    
T  24228023 cgacaaa 24228017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 5770380 - 5770272
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    |||||||||||||||||||||  |||||||||| |||| |||| ||||||||||| ||||||| | ||||| ||||||||| |||||| |||||||||||    
T  5770380 atataaaaattctcaacagttgcagcggatatagaccagacacctcaaaagtatatatgccatgagatcaaaatacaacatcataaaaattctccaaatc 5770281  T
Q  131 ccgacaaat 139  Q
    |||||||||    
T  5770280 ccgacaaat 5770272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 33383887 - 33384029
Alignment:
Q  9 caagaatatccaaacaacaagcatat--aaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatac 106  Q
    |||||| |||||||||||||||||||  |||||||||||||||||  |||||||||| | || |||  || ||||| |||||| ||| | ||||| ||||    
T  33383887 caagaaaatccaaacaacaagcatatataaaaattctcaacagttgcagcggatatagatcatacatctccaaagtctacatgtcatgagatcaaaatac 33383986  T
Q  107 aacattataaaagttctccaaatcccgacaaatagacaaatct 149  Q
    ||||| |||||| |||||||||| ||||||||| | |||||||    
T  33383987 aacatcataaaaattctccaaattccgacaaatgggcaaatct 33384029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 40555365 - 40555482
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    |||||||||||||||||||||  ||||||||||||||| |||| |||| |||||||||| ||| | ||||| ||||| ||| |||||| |||| ||||||    
T  40555365 atataaaaattctcaacagttgcagcggatataaaccatacacctcaatagtatacatgtcatgagatcaaaatacatcatcataaaa-ttcttcaaatc 40555463  T
Q  131 ccgacaaatagacaaatct 149  Q
    ||||||||| | |||||||    
T  40555464 ccgacaaatgggcaaatct 40555482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 41213843 - 41213725
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    |||||||||||||||||||||  ||| ||||||||||| |||| |||||||||||||||  || | || || ||||| ||| |||||| |||||||||||    
T  41213843 atataaaaattctcaacagttgcagcagatataaaccatacacctcaaaagtatacatgtaatgagattaaaatacatcatcataaaaattctccaaatc 41213744  T
Q  131 ccgacaaatagacaaatct 149  Q
    ||||||||| | |||||||    
T  41213743 ccgacaaatgggcaaatct 41213725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 29217134 - 29217252
Alignment:
Q  20 aaacaacaagcatata-aaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaa 118  Q
    |||||||| |||| || ||||||||||||||||  ||||||||||||||| | | |||||||| |||||||| |  ||||||| ||||||||| ||||||    
T  29217134 aaacaacatgcatgtataaaattctcaacagttgcagcggatataaaccatataattcaaaagcatacatgctaagaaatcaaaatacaacatcataaaa 29217233  T
Q  119 gttctccaaatcccgacaa 137  Q
     |||||||||| |||||||    
T  29217234 attctccaaattccgacaa 29217252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 154
Target Start/End: Original strand, 21193153 - 21193274
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcc 131  Q
    |||||||||||||||||||   ||||||||||||||| | ||||| |||| |||||||| || | ||||| |||||  || |||||||||||| || |||    
T  21193153 tataaaaattctcaacagtcgcagcggatataaaccatatacttc-aaagcatacatgctatgatatcaaaatacataatcataaaagttctctaagtcc 21193251  T
Q  132 cgacaaatagacaaatcttcaaa 154  Q
    |||||||| |  |||||||||||    
T  21193252 cgacaaatgggtaaatcttcaaa 21193274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 137
Target Start/End: Original strand, 46143769 - 46143875
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctcc-aaatc 130  Q
    |||||||||||||||||||   ||||||||||||| | |||| ||||||||||||||| ||| | ||||| ||||| ||| || ||| |||||| |||||    
T  46143769 tataaaaattctcaacagtcgcagcggatataaacgatacacctcaaaagtatacatgtcatgatatcaaaatacatcatcatcaaaattctccaaaatc 46143868  T
Q  131 ccgacaa 137  Q
    |||||||    
T  46143869 ccgacaa 46143875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 9293583 - 9293476
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctcc-aaat 129  Q
    ||||||||||||||||||||   |||||||||||| || | | ||||||| |||||||| ||| | ||||| ||||||||| || ||| |||||| ||||    
T  9293583 atataaaaattctcaacagtcgcagcggatataaatcatataattcaaaaatatacatgtcatgatatcaaaatacaacatcatcaaaattctccaaaat 9293484  T
Q  130 cccgacaa 137  Q
    ||||||||    
T  9293483 cccgacaa 9293476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 78692 - 78576
Alignment:
Q  16 atccaaacaacaagcatat--aaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacatta 113  Q
    |||||||||||| ||||||  ||||||||||||||||   |||||||||| | || |||  || |||||||||||||||| | ||||| ||||| ||| |    
T  78692 atccaaacaacatgcatatgtaaaaattctcaacagtggcagcggatatagatcatacatctccaaagtatacatgccatgagatcaaaatacatcatca 78593  T
Q  114 taaaagttctccaaatc 130  Q
    |  || |||||||||||    
T  78592 tgtaaattctccaaatc 78576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 21041782 - 21041890
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    |||||||| |||||||||||   |||||||||||| || |||  || ||||||||| || |||   ||||| ||||| ||| ||| || |||||||||||    
T  21041782 atataaaatttctcaacagtcgcagcggatataaatcatacatctccaaagtatacttgtcatgtgatcaaaatacatcatcatataaattctccaaatc 21041881  T
Q  131 ccgacaaat 139  Q
    |||||||||    
T  21041882 ccgacaaat 21041890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 5472575 - 5472468
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcc 131  Q
    ||||||||||| |||||||   |||||||| | | || |||  ||||||||||||||| ||| | ||| | ||||| ||| ||| || ||||||||||||    
T  5472575 tataaaaattcccaacagtcgcagcggataaagatcatacatctcaaaagtatacatgtcatgatatcgaaatacatcatcatataaattctccaaatcc 5472476  T
Q  132 cgacaaat 139  Q
    ||||||||    
T  5472475 cgacaaat 5472468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 18164201 - 18164257
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatg 89  Q
    ||||||||||||||||||||  |||||||||||| || |||| || ||||||||||||    
T  18164201 tataaaaattctcaacagttgcagcggatataaatcatacacctc-aaagtatacatg 18164257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 40438463 - 40438407
Alignment:
Q  83 atacatgccataaaatcaagatacaacattataaaagttctccaaatcccgacaaat 139  Q
    ||||||||||| | ||||| ||||||||| |||| | |||| |||||||||||||||    
T  40438463 atacatgccatgagatcaaaatacaacatcataacaattcttcaaatcccgacaaat 40438407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 43429722 - 43429604
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    ||||||||||| |||||||||  ||||||||||||||| |||| ||||||||||||||||||| | ||||| ||||| ||| |||||| |||||||||||    
T  43429722 atataaaaattttcaacagttgcagcggatataaaccatacacctcaaaagtatacatgccatgagatcaaaatacatcatcataaaaattctccaaatc 43429623  T
Q  131 ccgacaaatagacaaatct 149  Q
    || |||||| | |||||||    
T  43429622 ccaacaaatgggcaaatct 43429604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 6817817 - 6817696
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    ||||||||||||||||||||   |||||||||||| || |||| ||||||||||||||||||| | ||||| ||||| ||| ||| || |||||||||||    
T  6817817 atataaaaattctcaacagtcgcagcggatataaatcatacacctcaaaagtatacatgccatgagatcaaaatacatcatcatataaattctccaaatc 6817718  T
Q  131 ccgacaaatagacaaatcttca 152  Q
    ||||||||| | ||||||||||    
T  6817717 ccgacaaatgggcaaatcttca 6817696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 10902461 - 10902574
Alignment:
Q  23 caacaagcatataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttc 122  Q
    ||||| |||||||||||||||||||||||  ||||||||||||  | |||| ||||||||||||||||||| | ||||| ||||| ||| ||| || |||    
T  10902461 caacatgcatataaaaattctcaacagttgcagcggatataaattatacacctcaaaagtatacatgccatgagatcaaaatacatcatcatataaattc 10902560  T
Q  123 tccaaatcccgaca 136  Q
    ||||||||||||||    
T  10902561 tccaaatcccgaca 10902574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 22637304 - 22637427
Alignment:
Q  16 atccaaacaacaagcatataaaaatt-ctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattat 114  Q
    |||||||||||| ||||||| ||||| ||||||||||  ||||||||||||||| |||| ||||| ||||||||| ||| | ||||| ||||| ||| ||    
T  22637304 atccaaacaacaggcatatataaatttctcaacagttgcagcggatataaaccatacacctcaaa-gtatacatgtcatgagatcaaaatacatcatcat 22637402  T
Q  115 aaaagttctccaaatcccgacaaat 139  Q
    |||| ||||||||||||||||||||    
T  22637403 aaaaattctccaaatcccgacaaat 22637427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 21168887 - 21168780
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcc 131  Q
    ||||||||||||||||||||  |||||||||||| || |||| |||| |||||||||| ||| | ||||  ||||| ||| |||||| ||||||||||||    
T  21168887 tataaaaattctcaacagttgcagcggatataaatcatacacatcaatagtatacatgtcatgatatcacaatacatcatcataaaaattctccaaatcc 21168788  T
Q  132 cgacaaat 139  Q
    ||||||||    
T  21168787 cgacaaat 21168780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 41659610 - 41659713
Alignment:
Q  36 aaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcccgac 135  Q
    ||||||||||||| ||  ||||||||||||||| | || ||||||||||||||  ||| | ||||| ||||| ||| |||||| ||||||||||||||||    
T  41659610 aaaattctcaacaattgcagcggatataaaccataaacctcaaaagtatacatttcatgatatcaaaatacatcatcataaaaattctccaaatcccgac 41659709  T
Q  136 aaat 139  Q
    ||||    
T  41659710 aaat 41659713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 32 - 139
Target Start/End: Original strand, 12950562 - 12950668
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcc 131  Q
    |||||||||||||||||||   |||||||||||| || || || |||||||||||||||||| | ||||| ||||| ||| ||| || ||||||||||||    
T  12950562 tataaaaattctcaacagtcgcagcggatataaatcataccct-caaaagtatacatgccatgagatcaaaatacatcatcatataaattctccaaatcc 12950660  T
Q  132 cgacaaat 139  Q
    ||| ||||    
T  12950661 cgataaat 12950668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 137
Target Start/End: Complemental strand, 4164427 - 4164321
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctcc-aaatc 130  Q
    |||||||||||||||||  |  ||||||||||||||| | | |||||||||||||||||||| | || || ||||| ||| || ||| |||||| |||||    
T  4164427 tataaaaattctcaacaactacagcggatataaaccataaaattcaaaagtatacatgccatgatattaaaatacatcatcattaaaattctccaaaatc 4164328  T
Q  131 ccgacaa 137  Q
    |||||||    
T  4164327 ccgacaa 4164321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 17320778 - 17320644
Alignment:
Q  16 atccaaacaacaagcatata--aaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacatta 113  Q
    |||||||||||| |||||||  |||||||||| ||| |  |||||||||| | ||  ||  || ||||| |||||||||| | | ||| ||||||||| |    
T  17320778 atccaaacaacaggcatatataaaaattctca-cagctgcagcggatatagatcattcatctctaaagtctacatgccatgagaccaaaatacaacatca 17320680  T
Q  114 taaaagttctccaaatcccgacaaatagacaaatct 149  Q
    ||||| |||||||||||||||||||| | |||||||    
T  17320679 taaaaattctccaaatcccgacaaatgggcaaatct 17320644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 137
Target Start/End: Complemental strand, 4147872 - 4147769
Alignment:
Q  35 aaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctcc-aaatcccg 133  Q
    |||||||||||||| ||  ||||||||||||||| | | |||||||||||||||| ||| | ||||| |||||  || || ||| |||||| ||||||||    
T  4147872 aaaaattctcaacaattgcagcggatataaaccataaaattcaaaagtatacatgtcatgatatcaaaatacattatcatcaaaattctccgaaatcccg 4147773  T
Q  134 acaa 137  Q
    ||||    
T  4147772 acaa 4147769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 33371546 - 33371440
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcc 131  Q
    |||||||||||||||||||   ||||||||||||||| | ||||| |||| |||| || ||| | ||||| |||||  || ||||||||||| ||| |||    
T  33371546 tataaaaattctcaacagtcgcagcggatataaaccatatacttc-aaagcatacctgtcatgatatcaaaatacataatcataaaagttcttcaagtcc 33371448  T
Q  132 cgacaaat 139  Q
    ||||||||    
T  33371447 cgacaaat 33371440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 15552080 - 15551962
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    ||||||||||||||||||||   ||| |||||||| || |||  || ||| |||||||| ||| | ||||| ||||| ||| ||| || ||||| |||||    
T  15552080 atataaaaattctcaacagtcgcagcagatataaatcatacatctccaaaatatacatgtcatgagatcaatatacatcatcatataaattctctaaatc 15551981  T
Q  131 ccgacaaatagacaaatct 149  Q
    ||||||||| | |||||||    
T  15551980 ccgacaaatgggcaaatct 15551962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 136
Target Start/End: Complemental strand, 37919064 - 37918959
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    ||||||||||||||||||||   |||||||| ||| || |||  || ||| |||||||| ||| | ||||| ||||| ||| |||||| |||||||| ||    
T  37919064 atataaaaattctcaacagtcgcagcggatagaaatcatacatctccaaaatatacatgtcatgagatcaaaatacatcatcataaaaattctccaagtc 37918965  T
Q  131 ccgaca 136  Q
    ||||||    
T  37918964 ccgaca 37918959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 5230796 - 5230688
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    |||||||||||||||| ||||  |||| ||||||| || |||  || |||  ||||||| ||||| ||||| ||||| ||| ||| ||  ||||||||||    
T  5230796 atataaaaattctcaatagttgcagcgtatataaatcatacatctccaaaacatacatgtcataagatcaatatacatcatcatataaaatctccaaatc 5230697  T
Q  131 ccgacaaat 139  Q
    |||||||||    
T  5230696 ccgacaaat 5230688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 31416417 - 31416339
Alignment:
Q  16 atccaaacaacaagcatata--aaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccat 93  Q
    |||||||||||| |||||||  ||||||||||||||||  |||| |||||||||| |||| || |||||||| |||||||    
T  31416417 atccaaacaacaggcatatataaaaattctcaacagttgcagcgaatataaaccatacacctc-aaagtatatatgccat 31416339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 17760941 - 17760870
Alignment:
Q  78 aaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcccgacaaatagacaaatct 149  Q
    |||||||||||| ||||| ||||| ||||| ||| ||| || ||||||||||| |||||||| | |||||||    
T  17760941 aaagtatacatgtcataagatcaaaatacatcatcatataaattctccaaatctcgacaaattggcaaatct 17760870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 19062261 - 19062190
Alignment:
Q  78 aaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcccgacaaatagacaaatct 149  Q
    |||||||||||| ||||| ||||| ||||| ||| ||| || ||||||||||| |||||||| | |||||||    
T  19062261 aaagtatacatgtcataagatcaaaatacatcatcatataaattctccaaatctcgacaaattggcaaatct 19062190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 136
Target Start/End: Original strand, 8602295 - 8602400
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    |||||||| |||||||||||   |||||||||||  || |||  || ||| |||||||| ||||| ||||| ||||| ||| ||| || |||||||| ||    
T  8602295 atataaaatttctcaacagtcgcagcggatataagtcatacatctccaaaatatacatgtcataagatcaaaatacatcatcatataaattctccaagtc 8602394  T
Q  131 ccgaca 136  Q
    ||||||    
T  8602395 ccgaca 8602400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 137
Target Start/End: Original strand, 18968068 - 18968172
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcc 131  Q
    ||||||||||| |||||||   |||||||||||| || |||| | |||| |||||||| ||| | ||||| |||   || ||||||| ||||||||||||    
T  18968068 tataaaaattc-caacagtcgcagcggatataaagcatacacctaaaaaatatacatgtcatgatatcaaaatatctcaatataaaaattctccaaatcc 18968166  T
Q  132 cgacaa 137  Q
    ||||||    
T  18968167 cgacaa 18968172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 15006831 - 15006696
Alignment:
Q  16 atccaaacaacaagcatata--aaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacatta 113  Q
    |||||||||||| |||||||  |||||||| |||||||  ||||||||||||||| |||| | |||||| |||||||||| | ||||| ||||||||| |    
T  15006831 atccaaacaacaggcatatataaaaattcttaacagttgcagcggatataaaccatacaccttaaaagtctacatgccatgagatcaaaatacaacatca 15006732  T
Q  114 taaaagttctccaaatcccgacaaatagacaaatct 149  Q
    ||||| ||||| |||||||||||||| | |||||||    
T  15006731 taaaaattctcgaaatcccgacaaatgggcaaatct 15006696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 34964905 - 34965029
Alignment:
Q  17 tccaaacaacaagcatat--aaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattat 114  Q
    ||||||||||| ||||||  |||||||||||||| ||  ||| ||||||||||| |||| | ||||||||||||||||| | ||||| ||||| ||| ||    
T  34964905 tccaaacaacaggcatatttaaaaattctcaacatttgcagcagatataaaccatacacctaaaaagtatacatgccatgagatcaaaatacatcatcat 34965004  T
Q  115 aaaagttctccaaatcccgacaaat 139  Q
    |||| ||||| ||||||||||||||    
T  34965005 aaaaattctctaaatcccgacaaat 34965029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 22468309 - 22468174
Alignment:
Q  16 atccaaacaacaagcatata--aaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacatta 113  Q
    |||||||||||| |||||||  ||||||||||||||||  |||||||||| | ||  ||  || ||||| |||||| ||| | ||||| ||||||||| |    
T  22468309 atccaaacaacaggcatatataaaaattctcaacagttgcagcggatatagatcatgcatctctaaagtctacatggcatgagatcaaaatacaacatca 22468210  T
Q  114 taaaagttctccaaatcccgacaaatagacaaatct 149  Q
    ||||| |||||||||||||||||||| |||||||||    
T  22468209 taaaaattctccaaatcccgacaaatggacaaatct 22468174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 12311186 - 12311080
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcc 131  Q
    |||||||||||||||||||   ||||||||||||||| | ||||| |||| ||||||||||| | ||||| |||||  || ||||| ||||||||| |||    
T  12311186 tataaaaattctcaacagtcgcagcggatataaaccatatacttc-aaagcatacatgccatgatatcaaaatacataatcataaatgttctccaagtcc 12311088  T
Q  132 cgacaaat 139  Q
    ||||||||    
T  12311087 cgacaaat 12311080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 19670525 - 19670586
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgcca 92  Q
    |||||||||||||||||||||  ||||||||||||||| |||| || |||| ||||||||||    
T  19670525 atataaaaattctcaacagttgcagcggatataaaccatacacctccaaagcatacatgcca 19670586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 137
Target Start/End: Original strand, 29603566 - 29603671
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcc 131  Q
    |||||||||||||||||||  |||||||||||||||| ||| || || || ||||||| ||| | |||||  ||   || ||||||| ||||||||||||    
T  29603566 tataaaaattctcaacagtcgtagcggatataaaccatacaatttaagagcatacatgtcatgatatcaaagtatctcaatataaaaattctccaaatcc 29603665  T
Q  132 cgacaa 137  Q
    ||||||    
T  29603666 cgacaa 29603671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 22595844 - 22595736
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    |||||||| |||||||||||   ||| |||||||| || |||  || |||||||||||| |||   ||||| ||||| ||| ||| || ||||||||| |    
T  22595844 atataaaatttctcaacagtcgcagcagatataaatcatacatctccaaagtatacatgtcatgtgatcaaaatacatcatcatataaattctccaaacc 22595745  T
Q  131 ccgacaaat 139  Q
    |||||||||    
T  22595744 ccgacaaat 22595736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 6e-25; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 50224340 - 50224222
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    ||||| |||||||||||||||  ||||||||||||| | |||| |||||||||||||| |||| | ||||| ||||| ||  |||||| |||||||||||    
T  50224340 atatataaattctcaacagttgcagcggatataaacaatacacctcaaaagtatacataccatgagatcaaaatacatcaacataaaaattctccaaatc 50224241  T
Q  131 ccgacaaatagacaaatct 149  Q
    ||||||||| |||||||||    
T  50224240 ccgacaaatggacaaatct 50224222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 47470518 - 47470409
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattat-aaaagttctccaaat 129  Q
    ||||||||||||||||||||   ||||||||||||||| |||| ||||||||||||||| ||| | ||||| ||||| ||| || |||| ||||||||||    
T  47470518 atataaaaattctcaacagtcgcagcggatataaaccatacacctcaaaagtatacatgtcatgatatcaaaatacatcatcataaaaaattctccaaat 47470419  T
Q  130 cccgacaaat 139  Q
    | ||||||||    
T  47470418 ctcgacaaat 47470409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 13596221 - 13596086
Alignment:
Q  16 atccaaacaacaagcatata--aaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacatta 113  Q
    |||||||||||| |||||||  |||||| |||||||||  | |||||||| | || |||  || ||||| |||||||||| | ||||| ||||||||| |    
T  13596221 atccaaacaacaggcatatataaaaattttcaacagttgcatcggatatagatcatacatctccaaagtctacatgccatgagatcaaaatacaacatca 13596122  T
Q  114 taaaagttctccaaatcccgacaaatagacaaatct 149  Q
    ||||| ||||||||||||||| |||| | |||||||    
T  13596121 taaaaattctccaaatcccgataaatgggcaaatct 13596086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 10239625 - 10239519
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    |||||||||||||  || |||  ||||||||||||||| |||||||||||||||||||||||| |  |||| ||||| ||  |||||| |||| |||||     
T  10239625 atataaaaattctataccgttgcagcggatataaaccatacacttcaaaagtatacatgccatgaggtcaaaatacatcaacataaaaattcttcaaatt 10239526  T
Q  131 ccgacaa 137  Q
    |||||||    
T  10239525 ccgacaa 10239519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 19557309 - 19557421
Alignment:
Q  20 aaacaacaagcatata-aaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaa 118  Q
    |||||||| ||||| | ||||||||||||| ||  ||||||||||||||| |||| ||||| |||||||||| || | ||||| ||||| ||| ||||||    
T  19557309 aaacaacaggcatacataaaattctcaacaattgcagcggatataaaccatacacctcaaa-gtatacatgctatgagatcaaaatacatcatcataaaa 19557407  T
Q  119 gttctccaaatccc 132  Q
     |||||||||||||    
T  19557408 attctccaaatccc 19557421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 13449196 - 13449139
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatg 89  Q
    ||||||||||||||||||||  ||||||||||||| | |||| |||||||||||||||    
T  13449196 tataaaaattctcaacagttgcagcggatataaactatacacctcaaaagtatacatg 13449139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 5407163 - 5407223
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccat 93  Q
    |||||| |||||||||||||  ||||||||||||||| |||| || ||||||||||||||||    
T  5407163 tataaatattctcaacagttgcagcggatataaaccatacacctc-aaagtatacatgccat 5407223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 18241370 - 18241312
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgc 90  Q
    ||||||||||||||||||||  |||||||||||| || | | |||||||| ||||||||    
T  18241370 tataaaaattctcaacagttgcagcggatataaatcatataattcaaaagcatacatgc 18241312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 6e-25; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 6092425 - 6092559
Alignment:
Q  16 atccaaacaacaagcatata-aaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattat 114  Q
    |||||||||||||||||||| ||||||||||||||||  |||||||||| | || |||  || ||||| |||||| | ||| ||||| ||||||||| ||    
T  6092425 atccaaacaacaagcatatataaaattctcaacagttgcagcggatatagatcatacatctccaaagtctacatgtcgtaagatcaaaatacaacatcat 6092524  T
Q  115 aaaagttctccaaatcccgacaaatagacaaatct 149  Q
    |||| |||||||||||||||||||| | |||||||    
T  6092525 aaaaattctccaaatcccgacaaatgggcaaatct 6092559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 32 - 139
Target Start/End: Original strand, 24272039 - 24272146
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcc 131  Q
    |||||||||||||||||||   || ||||||||| || |||| || |||||||| ||| ||| | ||||| ||||| ||| |||||| ||||||||||||    
T  24272039 tataaaaattctcaacagtcgcagtggatataaatcatacacctctaaagtatatatgtcatgatatcaaaatacatcatcataaaaattctccaaatcc 24272138  T
Q  132 cgacaaat 139  Q
    ||||||||    
T  24272139 cgacaaat 24272146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 25132242 - 25132326
Alignment:
Q  64 aaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcccgacaaatagacaaatct 149  Q
    ||||| |||||||||| ||||||||||||| | ||||| ||||||||| |||||| |||||||||||||| ||||| | |||||||    
T  25132242 aaccatacacttcaaa-gtatacatgccatgagatcaaaatacaacatcataaaaattctccaaatcccgtcaaatgggcaaatct 25132326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 30995163 - 30995105
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatg 89  Q
    ||||||||||||||||||||   ||||||||||||||| |||| |||||||||||||||    
T  30995163 atataaaaattctcaacagtcgcagcggatataaaccatacacctcaaaagtatacatg 30995105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 42689438 - 42689386
Alignment:
Q  225 ccatatctctagtccatcagaagcataaggatagtcctctatcagaagtcgaa 277  Q
    ||||||||||| |||||||  ||||||||| ||||||||||||||||| ||||    
T  42689438 ccatatctctaatccatcaacagcataagggtagtcctctatcagaagacgaa 42689386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 42692389 - 42692450
Alignment:
Q  204 aacccatgacttaatagcagcccatatctctagtccatcagaagcataaggatagtcctcta 265  Q
    |||||||| ||| || |||||||||||||||| |||||||  ||||||||| || |||||||    
T  42692389 aacccatgtctttattgcagcccatatctctaatccatcatgagcataagggtaatcctcta 42692450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 136
Target Start/End: Complemental strand, 4925 - 4820
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    ||||||||||||||||| |||  |||||||||| | || |||  || ||||| |||||||||| ||||||| ||||||||| |||||| |||||||||||    
T  4925 atataaaaattctcaacggttgcagcggatatagatcatacatctccaaagtctacatgccatgaaatcaaaatacaacatcataaaaattctccaaatc 4826  T
Q  131 ccgaca 136  Q
    ||||||    
T  4825 ccgaca 4820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 137
Target Start/End: Original strand, 99138 - 99243
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcc 131  Q
    ||||||||||||||||||||  |||||||||||| || |||| ||||||||||||||||||| | | | | ||| ||||| |||||| ||||| ||||||    
T  99138 tataaaaattctcaacagttgcagcggatataaatcatacacctcaaaagtatacatgccatgataacgaaatataacatcataaaaattctctaaatcc 99237  T
Q  132 cgacaa 137  Q
    ||||||    
T  99238 cgacaa 99243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 2172 - 2044
Alignment:
Q  16 atccaaacaacaagcatata--aaaattctcaacagttttagcggatataaaccacacacttcaaaagta----tacatgccataaaatcaagatacaac 109  Q
    |||||||||||| |||||||  |||||||||||||||| |||||||||||||||| |||||||||||  |    |||||||||| |  |||| ||||| |    
T  2172 atccaaacaacaggcatatataaaaattctcaacagttgtagcggatataaaccatacacttcaaaaaaaaacatacatgccatgaggtcaaaatacatc 2073  T
Q  110 attataaaagttctccaaatcccgacaaat 139  Q
    || |||||| |||||| |||||||||||||    
T  2072 atcataaaaattctcc-aatcccgacaaat 2044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 14308 - 14254
Alignment:
Q  16 atccaaacaacaagcatata--aaaattctcaacagttttagcggatataaacca 68  Q
    |||||||||||| |||||||  ||||||||||||||||  |||||||||||||||    
T  14308 atccaaacaacaggcatatataaaaattctcaacagttgcagcggatataaacca 14254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 11182 - 11086
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaa 128  Q
    ||||||||||||||||||||  | ||||||||||||| |||| | ||||||||||||| ||| | ||||| ||||| ||| |||||| |||||||||    
T  11182 tataaaaattctcaacagttgcaacggatataaaccatacacctaaaaagtatacatgtcatgatatcaaaatacatcatcataaaaattctccaaa 11086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 35914 - 35971
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatg 89  Q
    ||||||||||||||||||||  ||||||||||||||| |||| |||||||||||||||    
T  35914 tataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatg 35971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 136
Target Start/End: Complemental strand, 99124 - 99019
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    ||||||||||||||||||||   |||||||||||  || |||  || |||||||||||| ||| | ||||| ||||| ||||||| || |||||||||||    
T  99124 atataaaaattctcaacagtcgcagcggatataagtcatacatctccaaagtatacatgtcatgagatcaatatacatcattatataaattctccaaatc 99025  T
Q  131 ccgaca 136  Q
    ||||||    
T  99024 ccgaca 99019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 139
Target Start/End: Original strand, 2935 - 3041
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcc 131  Q
    ||||||||||||||||| |   |||||||||||||||  ||||||||| | ||||||||||| | ||||| |||||  || |||||| |||||||| |||    
T  2935 tataaaaattctcaacaatcgcagcggatataaaccattcacttcaaa-gcatacatgccatgatatcaaaatacataatcataaaaattctccaagtcc 3033  T
Q  132 cgacaaat 139  Q
    ||||||||    
T  3034 cgacaaat 3041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 3865 - 3808
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatg 89  Q
    ||||||||||||||||||||  ||| ||||||||||| |||| |||||||||||||||    
T  3865 tataaaaattctcaacagttgcagcagatataaaccatacacctcaaaagtatacatg 3808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 136
Target Start/End: Complemental strand, 73467 - 73362
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    |||||||||||||||||| |   |||||||||||| || |||  || |||||||||||||||| | ||||| ||||| ||| ||| || |||||||| ||    
T  73467 atataaaaattctcaacaatcgcagcggatataaatcatacatctccaaagtatacatgccatgagatcaaaatacatcatcatataaattctccaagtc 73368  T
Q  131 ccgaca 136  Q
    ||||||    
T  73367 ccgaca 73362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 26125 - 26045
Alignment:
Q  58 gatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattat-aaaagttctccaaatcccgacaa 137  Q
    ||||||||||| |||| ||||||||||||||| ||| | ||||| ||||| ||| || |||| ||||||||||||||||||    
T  26125 gatataaaccatacacctcaaaagtatacatgtcatgatatcaaaatacatcatcataaaaaattctccaaatcccgacaa 26045  T

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Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 139
Target Start/End: Complemental strand, 19983 - 19889
Alignment:
Q  44 caacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcccgacaaat 139  Q
    |||||||  |||||||||||||||| | |||||||| | ||||||||||| | ||||| |||||  || |||||| |||||||| |||||||||||    
T  19983 caacagtcgtagcggatataaaccatatacttcaaa-gcatacatgccatgatatcaaaatacataatcataaaatttctccaagtcccgacaaat 19889  T

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Target: scaffold0021; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 139
Target Start/End: Complemental strand, 29559 - 29465
Alignment:
Q  44 caacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcccgacaaat 139  Q
    |||||||  |||||||||||||||| | |||||||| | ||||||||||| | ||||| |||||  || |||||| |||||||| |||||||||||    
T  29559 caacagtcgtagcggatataaaccatatacttcaaa-gcatacatgccatgatatcaaaatacataatcataaaatttctccaagtcccgacaaat 29465  T

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Target: scaffold0115 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 19330 - 19440
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatc 130  Q
    ||||||||||| |||||||||  |||||||||| | || |||  || ||||| |||||| ||| | ||||| ||||| ||| ||| || |||||||||||    
T  19330 atataaaaattatcaacagttgcagcggatatagatcatacatctccaaagtctacatgtcatgagatcaaaatacatcatcatataaattctccaaatc 19429  T
Q  131 ccgacaaatag 141  Q
    |||||| ||||    
T  19430 ccgacatatag 19440  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 141437 - 141379
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaacc-acacacttcaaaagtatacatg 89  Q
    ||||||||||||||||||||  |||||||||||||| | |||| |||||||||||||||    
T  141437 tataaaaattctcaacagttgcagcggatataaaccaatacacctcaaaagtatacatg 141379  T

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Target: scaffold0387 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 3198 - 3101
Alignment:
Q  41 tctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctcc-aaatcccgacaa 137  Q
    ||||||||||   ||||||||||||||| |||| ||||||||||||||| ||| | ||||| ||||| ||| || ||| || ||| ||||||||||||    
T  3198 tctcaacagtcgcagcggatataaaccagacacctcaaaagtatacatgtcatgatatcaaaatacatcatgatcaaaattttccaaaatcccgacaa 3101  T

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Target: scaffold0327 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 139
Target Start/End: Complemental strand, 7056 - 6961
Alignment:
Q  43 tcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcccgacaaat 139  Q
    |||||||||  ||||||||||||||  | |  ||||||| |||||||| || | ||||| ||||| ||| |||||| ||||||||||||||||||||    
T  7056 tcaacagttgcagcggatataaaccttataactcaaaagcatacatgctatgatatcaa-atacatcatcataaaaattctccaaatcccgacaaat 6961  T

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Target: scaffold0151 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 31773 - 31717
Alignment:
Q  83 atacatgccataaaatcaagatacaacattataaaagttctccaaatcccgacaaat 139  Q
    ||||||||||| | |||||||||||  || ||||||||||||||| |||||||||||    
T  31773 atacatgccattatatcaagatacataatcataaaagttctccaagtcccgacaaat 31717  T

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Target: scaffold0010 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 123607 - 123520
Alignment:
Q  31 atataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaagatacaacattataaaa 118  Q
    ||||| |||||||||| ||||  ||| |||||||| || |||| ||||||||||||||| ||| | ||||| ||||| ||| ||||||    
T  123607 atatataaattctcaatagttgcagcagatataaatcatacacctcaaaagtatacatgtcatgagatcaaaatacatcatcataaaa 123520  T

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Target: scaffold0174 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 552 - 624
Alignment:
Q  20 aaacaacaagcatataaaaa--ttctcaacagttttagcggatataaaccacacacttcaaaagtatacatgc 90  Q
    |||||||| ||||||| |||  ||||||||||||  ||||||||||||||| | | |||||||| ||||||||    
T  552 aaacaacatgcatatataaacgttctcaacagttgcagcggatataaaccatataattcaaaagcatacatgc 624  T

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Target: scaffold0165 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 20136 - 20193
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatg 89  Q
    ||||||||||||||||||||  |||  ||||||| || |||| |||||||||||||||    
T  20136 tataaaaattctcaacagttgcagcaaatataaatcatacacctcaaaagtatacatg 20193  T

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Target: scaffold0107 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 11416 - 11536
Alignment:
Q  20 aaacaacaagcatata-aaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccataaaatcaaga-tacaacattataaa 117  Q
    |||||||| |||| || |||| ||||||||||   ||||||||||||||| | |||||||| | ||||||| ||| | || || | |||||||  |||||    
T  11416 aaacaacatgcatgtataaaaatctcaacagtcgcagcggatataaaccatatacttcaaa-gaatacatgacatgatataaaaaatacaacaacataaa 11514  T
Q  118 agttctccaaatcccgacaaat 139  Q
    |||||||||| |||||||||||    
T  11515 agttctccaagtcccgacaaat 11536  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 103976 - 104035
Alignment:
Q  32 tataaaaattctcaacagttttagcggatataaaccacacacttcaaaagtatacatgccat 93  Q
    ||||||||||||||||||||  ||||||||| ||||| |||| |||||| ||||||||||||    
T  103976 tataaaaattctcaacagttgcagcggatat-aaccatacacctcaaaa-tatacatgccat 104035  T

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Target: scaffold0138 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 18665 - 18728
Alignment:
Q  75 tcaaaagtatacatgccataaaatcaagatacaacattataaaagttctccaaatcccgacaaat 139  Q
    ||||||| |||||||| || | ||||| ||||| ||| |||||| ||||||||||||||||||||    
T  18665 tcaaaagcatacatgctatgatatcaa-atacatcatcataaaaattctccaaatcccgacaaat 18728  T

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