View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14229_high_12 (Length: 451)
Name: NF14229_high_12
Description: NF14229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14229_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 311 - 432
Target Start/End: Complemental strand, 19954270 - 19954149
Alignment:
| Q |
311 |
acactattatggtacaaacagggtatcctcttatcatgacgtgagtgaagttaaaggtgctaccttgactctgttattacttaattggttataactaaaa |
410 |
Q |
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| T |
19954270 |
acactattatggtacaaacagggtatcctcttatcatgacgtgagtgaagttaaaggtgctaccttgactctgttattacttaattggttataactaaaa |
19954171 |
T |
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| Q |
411 |
ctaggtaattaacacttatatg |
432 |
Q |
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|||||||||||||||||||||| |
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| T |
19954170 |
ctaggtaattaacacttatatg |
19954149 |
T |
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