View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14229_high_35 (Length: 253)
Name: NF14229_high_35
Description: NF14229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14229_high_35 |
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Alignment Details
Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 463494 - 463708
Alignment:
| Q |
30 |
cgtgctttattatcagccgta----ggtttaccactaaaatgactaaacttcctcttttttattgagtcttctgtttagctttctgtacccaaactttca |
125 |
Q |
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| T |
463494 |
cgtgctttattatcagccgtacgtaggtttaccactaaaatgactaaacttcctcttttttattgagtcttctgtttagctttctgtacccaaactttca |
463593 |
T |
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| Q |
126 |
tcatcgatagtcatctgatcatcttcctggtcattatcatcttcctcgtcatggtcggttaacaactcatccccaagaacatcagttgcaaaatcgactc |
225 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
463594 |
tcatcgatagtcatctgatcatcttcctggtcattatcatcttcctcgtcatggtcggttaacaactcatccccaagaacatcagttgcaaaatcgactc |
463693 |
T |
|
| Q |
226 |
cttcataggcctttg |
240 |
Q |
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||||||||||||||| |
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| T |
463694 |
cttcataggcctttg |
463708 |
T |
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