View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14229_low_17 (Length: 444)

Name: NF14229_low_17
Description: NF14229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14229_low_17
NF14229_low_17
[»] chr7 (35 HSPs)
chr7 (1-444)||(31303279-31303722)
chr7 (66-319)||(21589574-21589828)
chr7 (97-372)||(18312725-18313000)
chr7 (100-372)||(20556664-20556940)
chr7 (93-372)||(5083724-5084002)
chr7 (105-373)||(21548350-21548618)
chr7 (58-287)||(4290810-4291039)
chr7 (58-266)||(28804883-28805094)
chr7 (93-332)||(15958244-15958485)
chr7 (68-372)||(32964651-32964954)
chr7 (148-348)||(22740646-22740844)
chr7 (254-372)||(28805116-28805234)
chr7 (254-356)||(21589721-21589823)
chr7 (180-257)||(46943761-46943839)
chr7 (62-163)||(28805125-28805227)
chr7 (254-351)||(22033158-22033254)
chr7 (274-361)||(28804891-28804978)
chr7 (253-360)||(32964848-32964955)
chr7 (62-184)||(32964658-32964779)
chr7 (118-257)||(27523442-27523583)
chr7 (62-166)||(31303358-31303463)
chr7 (256-365)||(31303553-31303661)
chr7 (139-226)||(5174910-5174998)
chr7 (77-153)||(22032981-22033056)
chr7 (77-184)||(22033147-22033253)
chr7 (222-264)||(2887188-2887230)
chr7 (108-164)||(15958416-15958472)
chr7 (254-335)||(15958243-15958324)
chr7 (274-351)||(22032980-22033056)
chr7 (254-361)||(5083697-5083803)
chr7 (108-166)||(5083890-5083949)
chr7 (108-166)||(20556717-20556776)
chr7 (274-357)||(22740069-22740152)
chr7 (254-356)||(18312924-18313026)
chr7 (257-361)||(4290927-4291031)
[»] chr8 (34 HSPs)
chr8 (97-372)||(38606763-38607039)
chr8 (135-372)||(1251450-1251687)
chr8 (93-373)||(5321892-5322176)
chr8 (68-297)||(15714601-15714831)
chr8 (59-362)||(5573688-5573992)
chr8 (119-372)||(31596693-31596947)
chr8 (92-288)||(26493267-26493463)
chr8 (116-372)||(31273516-31273773)
chr8 (224-372)||(33286115-33286263)
chr8 (135-286)||(1240874-1241025)
chr8 (182-352)||(29367076-29367245)
chr8 (97-286)||(24575842-24576023)
chr8 (202-373)||(32959457-32959628)
chr8 (107-216)||(26914637-26914746)
chr8 (108-261)||(6809804-6809959)
chr8 (281-371)||(24576180-24576270)
chr8 (180-257)||(15233241-15233318)
chr8 (62-166)||(1251575-1251680)
chr8 (97-166)||(31596735-31596805)
chr8 (256-361)||(38606732-38606837)
chr8 (58-258)||(24537873-24538078)
chr8 (70-184)||(28700053-28700166)
chr8 (111-166)||(5573734-5573790)
chr8 (73-184)||(15233134-15233245)
chr8 (93-170)||(28700239-28700317)
chr8 (70-166)||(33286130-33286227)
chr8 (107-170)||(5322057-5322121)
chr8 (62-146)||(24576180-24576264)
chr8 (122-180)||(24920075-24920134)
chr8 (254-297)||(40502175-40502218)
chr8 (119-180)||(24919863-24919925)
chr8 (254-307)||(24919871-24919924)
chr8 (97-153)||(26493449-26493503)
chr8 (63-166)||(38606927-38607031)
[»] chr3 (58 HSPs)
chr3 (107-372)||(3823549-3823815)
chr3 (107-372)||(3785860-3786125)
chr3 (68-326)||(42637865-42638121)
chr3 (59-372)||(19280098-19280409)
chr3 (107-297)||(5341849-5342040)
chr3 (68-334)||(26308546-26308813)
chr3 (77-372)||(22432235-22432524)
chr3 (76-283)||(31545603-31545811)
chr3 (97-356)||(1705605-1705863)
chr3 (107-372)||(44080154-44080420)
chr3 (176-372)||(9710739-9710929)
chr3 (107-269)||(4169053-4169213)
chr3 (93-231)||(11501309-11501448)
chr3 (204-369)||(11509804-11509969)
chr3 (118-319)||(19624257-19624459)
chr3 (107-297)||(27707647-27707837)
chr3 (148-269)||(42481301-42481422)
chr3 (75-257)||(27335307-27335479)
chr3 (107-245)||(39126189-39126329)
chr3 (107-215)||(11509989-11510100)
chr3 (68-164)||(18733581-18733677)
chr3 (108-246)||(34627245-34627384)
chr3 (180-257)||(27365008-27365085)
chr3 (71-166)||(1705769-1705863)
chr3 (179-258)||(13358110-13358189)
chr3 (68-166)||(3823562-3823661)
chr3 (257-372)||(27040683-27040798)
chr3 (180-257)||(27326047-27326124)
chr3 (180-257)||(27332284-27332361)
chr3 (257-361)||(19280298-19280402)
chr3 (254-350)||(31545714-31545810)
chr3 (62-153)||(3785867-3785958)
chr3 (254-357)||(22432428-22432531)
chr3 (309-372)||(31545424-31545487)
chr3 (195-334)||(23163264-23163404)
chr3 (179-320)||(27079314-27079454)
chr3 (179-320)||(27085111-27085251)
chr3 (62-170)||(11509808-11509917)
chr3 (79-166)||(27040686-27040774)
chr3 (232-316)||(41571797-41571881)
chr3 (97-166)||(44080196-44080267)
chr3 (254-361)||(3823750-3823856)
chr3 (108-166)||(42638055-42638114)
chr3 (189-239)||(23163787-23163837)
chr3 (101-166)||(27079394-27079460)
chr3 (101-166)||(27085191-27085257)
chr3 (253-371)||(27335288-27335406)
chr3 (58-166)||(33488340-33488449)
chr3 (68-166)||(19280111-19280208)
chr3 (274-361)||(5341994-5342081)
chr3 (253-360)||(18733572-18733678)
chr3 (62-132)||(9710852-9710922)
chr3 (97-159)||(11501248-11501310)
chr3 (254-361)||(3786060-3786164)
chr3 (59-178)||(27326158-27326278)
chr3 (59-178)||(27332395-27332515)
chr3 (93-153)||(27707610-27707670)
chr3 (172-216)||(55165099-55165143)
[»] chr2 (19 HSPs)
chr2 (58-374)||(30905947-30906264)
chr2 (68-288)||(1400680-1400900)
chr2 (114-372)||(43900426-43900685)
chr2 (58-284)||(28527220-28527445)
chr2 (105-374)||(45305863-45306131)
chr2 (70-257)||(33667328-33667516)
chr2 (148-357)||(7378457-7378663)
chr2 (254-361)||(1400678-1400785)
chr2 (254-361)||(28527228-28527334)
chr2 (71-166)||(30906150-30906246)
chr2 (70-234)||(34175155-34175309)
chr2 (97-166)||(41212411-41212480)
chr2 (71-150)||(33667252-33667331)
chr2 (254-357)||(33667413-33667516)
chr2 (274-357)||(41212424-41212507)
chr2 (256-361)||(30905955-30906060)
chr2 (97-166)||(45305907-45305977)
chr2 (70-166)||(7378566-7378663)
chr2 (133-166)||(1400873-1400906)
[»] chr6 (50 HSPs)
chr6 (97-326)||(10304636-10304865)
chr6 (79-370)||(3222332-3222624)
chr6 (68-372)||(22608259-22608566)
chr6 (93-266)||(138646-138820)
chr6 (93-266)||(146667-146841)
chr6 (108-294)||(33814961-33815149)
chr6 (68-374)||(23595050-23595344)
chr6 (77-265)||(9068411-9068599)
chr6 (77-268)||(3620675-3620867)
chr6 (68-216)||(2430513-2430662)
chr6 (58-258)||(2834974-2835175)
chr6 (181-361)||(9474543-9474718)
chr6 (68-186)||(30056032-30056152)
chr6 (232-372)||(11108147-11108287)
chr6 (62-177)||(7706764-7706881)
chr6 (70-163)||(20084589-20084683)
chr6 (70-163)||(24386318-24386412)
chr6 (77-166)||(22608281-22608370)
chr6 (254-350)||(9068503-9068599)
chr6 (257-369)||(24386312-24386424)
chr6 (68-166)||(11108175-11108274)
chr6 (254-371)||(7706758-7706876)
chr6 (77-166)||(7915697-7915787)
chr6 (275-361)||(11108074-11108160)
chr6 (148-216)||(7706864-7706932)
chr6 (112-166)||(2365649-2365704)
chr6 (254-361)||(2835060-2835167)
chr6 (117-177)||(2430645-2430706)
chr6 (316-372)||(7915595-7915651)
chr6 (69-153)||(23595066-23595150)
chr6 (260-315)||(2365649-2365704)
chr6 (68-142)||(7915608-7915683)
chr6 (257-368)||(20084578-20084689)
chr6 (274-360)||(23595259-23595345)
chr6 (254-307)||(2430650-2430703)
chr6 (62-166)||(3222337-3222441)
chr6 (107-152)||(11108115-11108160)
chr6 (254-361)||(2430511-2430618)
chr6 (259-351)||(7915696-7915788)
chr6 (254-361)||(30056030-30056138)
chr6 (63-146)||(138813-138895)
chr6 (63-146)||(146834-146916)
chr6 (93-159)||(9068329-9068395)
chr6 (59-164)||(9474536-9474645)
chr6 (178-216)||(20084680-20084718)
chr6 (178-216)||(24386283-24386321)
chr6 (256-348)||(3222532-3222624)
chr6 (103-166)||(7706936-7707000)
chr6 (274-334)||(10304632-10304692)
chr6 (108-163)||(10304802-10304858)
[»] scaffold1126 (3 HSPs)
scaffold1126 (68-364)||(114-412)
scaffold1126 (71-166)||(308-404)
scaffold1126 (257-361)||(112-217)
[»] chr5 (36 HSPs)
chr5 (97-366)||(22169361-22169631)
chr5 (91-371)||(13312498-13312778)
chr5 (100-284)||(35922718-35922903)
chr5 (68-288)||(42034740-42034959)
chr5 (107-307)||(38521914-38522113)
chr5 (97-372)||(31189474-31189747)
chr5 (59-371)||(33958878-33959189)
chr5 (108-334)||(19621419-19621645)
chr5 (148-372)||(43461688-43461911)
chr5 (183-374)||(43262708-43262913)
chr5 (56-218)||(15221616-15221779)
chr5 (222-372)||(36169394-36169543)
chr5 (274-371)||(35922607-35922704)
chr5 (58-167)||(36169302-36169411)
chr5 (124-233)||(30045885-30045994)
chr5 (62-166)||(36169432-36169536)
chr5 (125-212)||(2477312-2477400)
chr5 (107-180)||(19621557-19621631)
chr5 (180-257)||(30704398-30704476)
chr5 (68-150)||(43262816-43262898)
chr5 (180-257)||(7156105-7156182)
chr5 (68-153)||(35922619-35922704)
chr5 (254-358)||(15221662-15221766)
chr5 (69-152)||(31189488-31189571)
chr5 (254-361)||(13312696-13312799)
chr5 (254-371)||(33958875-33958991)
chr5 (62-165)||(13312504-13312607)
chr5 (75-153)||(7155998-7156076)
chr5 (62-166)||(22169362-22169467)
chr5 (148-228)||(622500-622578)
chr5 (254-351)||(35922830-35922927)
chr5 (260-361)||(36169310-36169410)
chr5 (257-361)||(42034857-42034961)
chr5 (302-375)||(16095508-16095581)
chr5 (253-334)||(30704321-30704402)
chr5 (121-164)||(2477255-2477299)
[»] chr4 (39 HSPs)
chr4 (58-370)||(19596680-19596996)
chr4 (70-374)||(17633250-17633554)
chr4 (97-372)||(9808972-9809250)
chr4 (58-288)||(1966731-1966960)
chr4 (125-370)||(16583496-16583742)
chr4 (97-372)||(9810658-9810937)
chr4 (97-321)||(42908518-42908741)
chr4 (97-365)||(24669077-24669347)
chr4 (98-374)||(8740725-8741004)
chr4 (177-373)||(33179775-33179971)
chr4 (179-368)||(55666844-55667031)
chr4 (97-263)||(14351069-14351236)
chr4 (117-319)||(35544376-35544577)
chr4 (179-277)||(33249634-33249732)
chr4 (141-288)||(2433694-2433842)
chr4 (97-166)||(17633440-17633510)
chr4 (253-346)||(24669270-24669363)
chr4 (97-170)||(55666920-55666993)
chr4 (257-361)||(1966739-1966841)
chr4 (256-361)||(19596882-19596988)
chr4 (278-372)||(19746939-19747033)
chr4 (278-372)||(19792773-19792867)
chr4 (62-166)||(16583501-16583606)
chr4 (223-288)||(20874815-20874880)
chr4 (274-357)||(17633250-17633333)
chr4 (70-166)||(9808987-9809084)
chr4 (274-351)||(9809194-9809271)
chr4 (70-166)||(9810673-9810770)
chr4 (291-371)||(25007632-25007711)
chr4 (101-153)||(35544532-35544584)
chr4 (59-184)||(24669074-24669201)
chr4 (241-279)||(1966978-1967016)
chr4 (274-351)||(9810881-9810958)
chr4 (254-361)||(14351160-14351267)
chr4 (62-153)||(19596685-19596776)
chr4 (92-146)||(33249568-33249622)
chr4 (274-336)||(42908685-42908747)
chr4 (120-166)||(1966931-1966979)
chr4 (321-374)||(23048934-23048987)
[»] chr1 (41 HSPs)
chr1 (58-278)||(29676982-29677202)
chr1 (58-373)||(34364130-34364443)
chr1 (68-365)||(34490094-34490391)
chr1 (94-300)||(29167743-29167948)
chr1 (69-374)||(5831429-5831734)
chr1 (107-335)||(38951839-38952071)
chr1 (97-280)||(25238467-25238650)
chr1 (97-288)||(42604200-42604392)
chr1 (181-369)||(517433-517623)
chr1 (108-216)||(2569962-2570071)
chr1 (58-374)||(5855003-5855317)
chr1 (110-315)||(9468064-9468261)
chr1 (257-358)||(5831633-5831734)
chr1 (181-257)||(2996025-2996101)
chr1 (257-361)||(34490289-34490393)
chr1 (108-208)||(9929677-9929778)
chr1 (254-361)||(13350892-13350999)
chr1 (254-351)||(2570006-2570102)
chr1 (68-153)||(13350894-13350979)
chr1 (254-359)||(29676992-29677096)
chr1 (58-148)||(13351008-13351098)
chr1 (92-180)||(9929862-9929951)
chr1 (253-361)||(5855201-5855309)
chr1 (109-180)||(38244791-38244863)
chr1 (107-166)||(517512-517571)
chr1 (68-166)||(5855018-5855116)
chr1 (75-154)||(28499643-28499722)
chr1 (79-153)||(2995924-2995997)
chr1 (254-371)||(9929870-9929988)
chr1 (122-180)||(17227288-17227346)
chr1 (59-153)||(34490091-34490184)
chr1 (256-318)||(38244801-38244863)
chr1 (112-153)||(9468064-9468105)
chr1 (309-358)||(34941712-34941761)
chr1 (254-297)||(24708080-24708123)
chr1 (255-297)||(17227506-17227548)
chr1 (105-177)||(2569904-2569979)
chr1 (254-359)||(38952005-38952110)
chr1 (279-359)||(13351008-13351088)
chr1 (346-374)||(29678696-29678724)
chr1 (68-132)||(42604120-42604184)
[»] scaffold0251 (1 HSPs)
scaffold0251 (163-371)||(10617-10825)
[»] scaffold0126 (3 HSPs)
scaffold0126 (230-372)||(21549-21689)
scaffold0126 (68-188)||(21424-21545)
scaffold0126 (62-166)||(21579-21682)
[»] scaffold0123 (1 HSPs)
scaffold0123 (176-368)||(24036-24234)
[»] scaffold0043 (2 HSPs)
scaffold0043 (180-257)||(87035-87112)
scaffold0043 (254-372)||(86873-86991)
[»] scaffold0024 (1 HSPs)
scaffold0024 (180-257)||(112158-112235)
[»] scaffold0291 (1 HSPs)
scaffold0291 (180-257)||(5870-5947)
[»] scaffold0213 (1 HSPs)
scaffold0213 (105-166)||(24738-24800)
[»] scaffold0016 (1 HSPs)
scaffold0016 (58-142)||(49409-49492)


Alignment Details
Target: chr7 (Bit Score: 384; Significance: 0; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 1 - 444
Target Start/End: Complemental strand, 31303722 - 31303279
Alignment:
Q  1 gaagaaaaaggtgtttaacgtggatgaaagaaatagtgggacattcatgtattataccaatgattgctagacacctttaatgtctacatccttttatacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31303722 gaagaaaaaggtgtttaacgtggatgaaagaaatagtgggacattcatgtattataccaatgattggtagacacctttaatgtctacatccttttatacc 31303623  T
Q  101 actttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgaccattatgtttccagaatttatttggttaactaagtg 200  Q
    |||  ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31303622 actcaaaaaaatttcagttaacaaaatatatggtatgtgtgaccacattttttagttgcgtgaccactatgtttccagaatttatttggttaactaagtg 31303523  T
Q  201 aaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgta 300  Q
     ||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  31303522 gaaaaatagtggtcacgcacattttagttgcatgaccacatttttcagcttctaaatagtggtcacgcaattgaaaaaatgtggtcacgcagaccatgta 31303423  T
Q  301 cttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattcatgtattattgattagaaaagtgacaat 400  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31303422 tttggttgactgaaatttttcagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattcatgtattattgattagaaaagtgacaat 31303323  T
Q  401 tctaaattttgaacaatgattacttggctcgtccttgattgatc 444  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  31303322 tccaaattttgaacaatgattacttggctcgtccttgattgatc 31303279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 66 - 319
Target Start/End: Complemental strand, 21589828 - 21589574
Alignment:
Q  66 gctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgac 164  Q
    |||| ||||| ||||||| ||||||| ||||||||||| |||||||||||||||| ||||||||||| | |||||||||||||||||| |||||| ||||    
T  21589828 gctaaacacccttaatgtgtacatccgtttataccactctaaaaaatttcagttatccaaatatatggtctgtgtgaccacatttttttagttgcatgac 21589729  T
Q  165 cattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtc 264  Q
    || ||| ||||||||| ||||||| |||| |||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||    
T  21589728 cactatttttccagaacttatttgattaattaagtggaaaaatagtggtcacacgcattttagttgcatgaccacatttttcagcttctaaatagtgatc 21589629  T
Q  265 acgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaatttt 319  Q
    || || |||||||||| |||||||  |||| || || ||| |||||| |||||||    
T  21589628 acacaactgaaaaaatatggtcacatagacaatatatttgattgactaaaatttt 21589574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 97 - 372
Target Start/End: Complemental strand, 18313000 - 18312725
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttccagaatttatttggttaact 195  Q
    ||||||| | ||||||||||| |||||||||||||| | |||||| | | ||||||| ||||||||||||| ||| |||| |||||||||| ||||||||    
T  18313000 taccactctgaaaaatttcagctaaccaaatatatggtttgtgtggctaaatttttttagttgcgtgaccactatttttcaagaatttattaggttaact 18312901  T
Q  196 aagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagacc 295  Q
    ||||| ||||||||||||||||  |||||||||||||||| |||| ||||||||||||||||||| || ||||| ||||||| ||||||||||  |||||    
T  18312900 aagtggaaaaatagtggtcacatgcattttagttgcgtgagcaca-ttttcagcttctaaatagtagtgacgcaactgaaaatatgtggtcacagagacc 18312802  T
Q  296 atgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    || || ||| || | |||||||||| |||||| |||||| || | ||||| ||||||||||||||||||||||||||    
T  18312801 atatatttgattaattgaaattttcgagagtggtacaaaggggtatacacgttaagggtgtctaccaatctttattc 18312725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 100 - 372
Target Start/End: Complemental strand, 20556940 - 20556664
Alignment:
Q  100 cactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttag-ttgcgtgaccattatgtttc---cagaatttatttggttaact 195  Q
    |||||| |||| ||||||||||| ||||||||  | ||| |||||||||||||| | ||| ||||||| ||| |||    ||||||||||||||||||||    
T  20556940 cactttgaaaattttcagttaactaaatatatagtctgtttgaccacatttttttggttgagtgaccactatttttttttcagaatttatttggttaact 20556841  T
Q  196 aagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagacc 295  Q
    ||||| ||||||| ||||||| |  |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||| | ||||    
T  20556840 aagtggaaaaatattggtcacgcgtattttagttgcgtgaccacatttttcagcttctaaatagtggtcacacaactgaaaaaatatggtcacaccgacc 20556741  T
Q  296 atgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    || || |||||| |||||||||||| ||||| | |||||  ||| ||||||||||||||||||||| ||||||||||    
T  20556740 atatatttggttaactgaaattttcgagagtaacacaaagagatatacacattaagggtgtctaccgatctttattc 20556664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 93 - 372
Target Start/End: Original strand, 5083724 - 5084002
Alignment:
Q  93 tttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgaccattatgtttccagaatttatttggtta 192  Q
    |||||| |||||| ||||||||||||||| |||||||||| | | |||||||||||||||||||| |||||||| ||| |||| ||||||||||| ||||    
T  5083724 tttatatcactttgaaaaatttcagttaatcaaatatatggtctttgtgaccacattttttagttacgtgaccactatttttctagaatttatttcgtta 5083823  T
Q  193 actaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcag 292  Q
    || ||||  ||||||||||||||| | || |||||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||||| ||     
T  5083824 acaaagttgaaaaatagtggtcacccgca-tttagttgcgtgaccatatttttcaacttctaaatagtggtcacgcaattgaaaaaatgtggtcacacat 5083922  T
Q  293 accatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    ||||| || ||| |  | |||||||||| ||| | ||||||| || |||| ||||||| ||| | |||||||||||||||    
T  5083923 accatatatttgatgaattgaaattttcgagaataatacaaaggggtgtatacattaaaggtatttaccaatctttattc 5084002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 105 - 373
Target Start/End: Complemental strand, 21548618 - 21548350
Alignment:
Q  105 taaaaaatttcagttaaccaaatatatgatatgtgtgaccacattt-tttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaa 203  Q
    |||||||||||||||||| ||||||||| | ||||||| || |||| |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||    
T  21548618 taaaaaatttcagttaactaaatatatggtctgtgtgatcatatttgtttagttgcgtgaccactatttttccagaatttatttggttaactaagtggaa 21548519  T
Q  204 aaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtactt 303  Q
    ||| |||||| || | ||||  |||||||||||||||||||||||||| |||||| ||||||| || |||||||||| ||||||| || ||||| |  ||    
T  21548518 aaacagtggttacgcgcattcgagttgcgtgaccacatttttcagcttttaaatattggtcacacaactgaaaaaatatggtcacacataccatat-ttt 21548420  T
Q  304 ggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattca 373  Q
    | || |||||||||||| |||||| ||||||    |||| | ||||| |||||||||| |||||||||||    
T  21548419 gattaactgaaattttcaagagtggtacaaagaagtgtatatattaaaggtgtctaccgatctttattca 21548350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 58 - 287
Target Start/End: Complemental strand, 4291039 - 4290810
Alignment:
Q  58 caatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agt 156  Q
    ||||||| | |||| ||||||||||| |  |||  ||| ||| ||||| |||||||||||||||||||||| ||||| ||| ||||||| |||||| |||    
T  4291039 caatgataggtagatacctttaatgtgtcaatctctttgtactactttgaaaaatttcagttaaccaaataaatgatctgtatgaccacgtttttttagt 4290940  T
Q  157 tgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaa 256  Q
    |||||||||| ||  ||| ||||||||||||||||||||||||| ||||||||||||||| | || || |||||||||||||||||||||| ||||||||    
T  4290939 tgcgtgaccactagtttttcagaatttatttggttaactaagtggaaaaatagtggtcacgcacactt-agttgcgtgaccacatttttcaacttctaaa 4290841  T
Q  257 tagtggtcacgcagctgaaaaaatgtggtca 287  Q
    |||||||||| || |||||||||||||||||    
T  4290840 tagtggtcactcaactgaaaaaatgtggtca 4290810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 58 - 266
Target Start/End: Original strand, 28804883 - 28805094
Alignment:
Q  58 caatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttt----tt 153  Q
    ||||||| | |||||||| ||||| | |||| |||||| ||||| | || ||||||||||||||||||||||||| | | ||||||||||||||    ||    
T  28804883 caatgataggtagacacccttaatatgtacacccttttgtaccattctagaaaatttcagttaaccaaatatatggtctatgtgaccacatttttttttt 28804982  T
Q  154 agttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttct 253  Q
    ||||| ||||||| ||| |||||| |||||||||||||||||||||| ||||||||||||| | | |||||| |||| ||||||||||||||||||||||    
T  28804983 agttgtgtgaccactatatttccataatttatttggttaactaagtggaaaaatagtggtc-cgcgcattttggttgtgtgaccacatttttcagcttct 28805081  T
Q  254 aaatagtggtcac 266  Q
    |||||||| ||||    
T  28805082 aaatagtgatcac 28805094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 93 - 332
Target Start/End: Original strand, 15958244 - 15958485
Alignment:
Q  93 tttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccaca-ttttttagttgcgtgaccattatgtttccagaatttatttggtt 191  Q
    |||||| |||||| |||||||| ||||||||||||||||| |  ||||||||||| ||||||||||| ||||||| ||| ||| ||||||||||||||||    
T  15958244 tttatatcactttgaaaaatttaagttaaccaaatatatggtcagtgtgaccacatttttttagttgtgtgaccactattttttcagaatttatttggtt 15958343  T
Q  192 aactaagt----gaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtca 287  Q
    || |||||     ||||||| ||| |||| | || |||| ||||||||||||||||||||||||||||||||| |||| ||| ||  |||||||||||||    
T  15958344 aaataagtaaaaaaaaaaattgtgatcacgcaca-tttaattgcgtgaccacatttttcagcttctaaatagt-gtcatgcaact-taaaaatgtggtca 15958440  T
Q  288 cgcagaccatgtacttggttgactgaaattttccagagtgataca 332  Q
    | |||||||| || || ||| ||||||||||| ||||||| ||||    
T  15958441 cacagaccatatatttagttaactgaaattttacagagtggtaca 15958485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 68 - 372
Target Start/End: Complemental strand, 32964954 - 32964651
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacat-tttttagttgcgtgacca 166  Q
    |||||||||||||||| |||| |||||| || |||| |||||||||| ||||||| | ||||||| | ||||||||||||| ||||||||||||||||||    
T  32964954 tagacacctttaatgtatacacccttttgtatcactctaaaaaatttaagttaactatatatatggtctgtgtgaccacatatttttagttgcgtgacca 32964855  T
Q  167 ttatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttct----------aaa 256  Q
     |           ||||||| |||||| |||||| |||||||||||||||   |||||||||| | |||||| ||||||||||||||          |||    
T  32964854 ct-----------atttattaggttaattaagtggaaaaatagtggtcacgtgcattttagttacatgaccatatttttcagcttctaaatgctggaaaa 32964766  T
Q  257 tagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgt 356  Q
    |||||||||| ||  || |||||| ||||||| || ||||| || || ||| ||| ||||| |  |||||| |  ||||| ||||||||||||||| |||    
T  32964765 tagtggtcacacaattg-aaaaatatggtcacacataccatatatttagttaacttaaattctttagagtggtgtaaatgaatgtacacattaaggatgt 32964667  T
Q  357 ctaccaatctttattc 372  Q
    ||||||||||||||||    
T  32964666 ctaccaatctttattc 32964651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 148 - 348
Target Start/End: Original strand, 22740646 - 22740844
Alignment:
Q  148 ttttttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttca 247  Q
    ||||||| ||||||||| | ||| ||| ||||||||||||||||||||||||| ||||||| || |||| |  |||||||||||||||||| ||||||||    
T  22740646 ttttttaattgcgtgactactattttttcagaatttatttggttaactaagtggaaaaataatgatcacgcatattttagttgcgtgaccatatttttca 22740745  T
Q  248 gcttctaaatagtggtcacgcagctg-aaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacaca 346  Q
    |||| |||||| ||||||| || ||| |||||||||||| || || || || || || ||| | |||||||||| | | |||||||||  ||||||||||    
T  22740746 gcttttaaata-tggtcacacaactgaaaaaaatgtggttacacaaactatatatttagttaattgaaattttctaaactgatacaaa--gatgtacaca 22740842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 254 - 372
Target Start/End: Original strand, 28805116 - 28805234
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    |||| ||| ||||||| |||||||||||||||||| || ||||| || |||||| ||| ||||||| |||||||||||||| || | |||||||||||||    
T  28805116 aaatcgtgatcacgcaactgaaaaaatgtggtcacacataccatatatttggttaacttaaatttttcagagtgatacaaaggggtatacacattaaggg 28805215  T
Q  354 tgtctaccaatctttattc 372  Q
    |||||||||||||||||||    
T  28805216 tgtctaccaatctttattc 28805234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 21589721 - 21589823
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    |||||||||||| ||| || ||||||||||||||| |||||||| || |||| | |||||||||||  |||||| || ||| ||||||||||||||||||    
T  21589721 aaatagtggtcatgcaactaaaaaaatgtggtcacacagaccatatatttggataactgaaattttttagagtggtataaacggatgtacacattaaggg 21589820  T
Q  354 tgt 356  Q
    |||    
T  21589821 tgt 21589823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 46943761 - 46943839
Alignment:
Q  180 atttatttggttaactaagtgaaaa--aatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaat 257  Q
    |||||||||||||||||||||||||  |||||||||||| | |||||||||||||||| |||| ||||||||||||||||    
T  46943761 atttatttggttaactaagtgaaaaaaaatagtggtcacgcgcattttagttgcgtgatcaca-ttttcagcttctaaat 46943839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 28805227 - 28805125
Alignment:
Q  62 gattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcg 160  Q
    ||||| |||||||| ||||||| || | || ||| || |||| | |||||||| ||||||||||||||||| |||||||||||||||||||| |||||||    
T  28805227 gattggtagacacccttaatgtgtatacccctttgtatcactctgaaaaatttaagttaaccaaatatatggtatgtgtgaccacattttttcagttgcg 28805128  T
Q  161 tga 163  Q
    |||    
T  28805127 tga 28805125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 351
Target Start/End: Original strand, 22033158 - 22033254
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaag 351  Q
    |||||||||||||||| || ||||||| ||||||| |||||||| || |||||| ||| ||||||| |||| || |||||| ||||||||||||||||    
T  22033158 aaatagtggtcacgcaactcaaaaaatatggtcacacagaccatatatttggttaactaaaatttttcagaatggtacaaa-ggatgtacacattaag 22033254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 28804978 - 28804891
Alignment:
Q  274 aaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctacc 361  Q
    |||||||||||||||  ||||||| || |||||| |||||||||||| ||| || |||||| || |||||| ||||||||||||||||    
T  28804978 aaaaaatgtggtcacatagaccatatatttggttaactgaaattttctagaatggtacaaaagggtgtacatattaagggtgtctacc 28804891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 360
Target Start/End: Original strand, 32964848 - 32964955
Alignment:
Q  253 taaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagg 352  Q
    ||||||||||||||||| || |||| |||||||||| |||||||| ||  | ||| ||| |||||||  ||||||||||||| || |||| ||||||| |    
T  32964848 taaatagtggtcacgcaactaaaaatatgtggtcacacagaccatatatatagttaacttaaattttttagagtgatacaaaagggtgtatacattaaag 32964947  T
Q  353 gtgtctac 360  Q
    ||||||||    
T  32964948 gtgtctac 32964955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 32964658 - 32964779
Alignment:
Q  62 gattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgt 161  Q
    ||||| |||||| | ||||||| ||||| | |||| |||||| |||| ||||| ||||||| ||||||||| |||||||||||| |||||| | ||| ||    
T  32964658 gattggtagacatccttaatgtgtacattcatttacaccactctaaagaatttaagttaactaaatatatggtatgtgtgaccatatttttcaattgtgt 32964757  T
Q  162 gaccattatgtttccagaattta 184  Q
    ||||| ||| ||||||| |||||    
T  32964758 gaccactat-tttccagcattta 32964779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 257
Target Start/End: Original strand, 27523442 - 27523583
Alignment:
Q  118 ttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttc-cagaatttatttggttaactaagtgaaaaaatagtggtca 215  Q
    |||| |||||||||||| ||||||| |||||||||| ||||| || || | ||| |||  |||||||||||||||||| |||||| ||||||||| ||||    
T  27523442 ttaatcaaatatatgatctgtgtgatcacatttttttagttgtgtaactactatttttttcagaatttatttggttaattaagtggaaaaatagtagtca 27523541  T
Q  216 cactcattttagttgcgtgaccacatttttcagcttctaaat 257  Q
      | ||||||| |||  ||||||  |||||||| ||||||||    
T  27523542 agcacattttaattgtatgaccatgtttttcagtttctaaat 27523583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 31303358 - 31303463
Alignment:
Q  62 gattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcg 160  Q
    ||||| |||||||| ||||||| ||||||| ||| || |||| | |||||||||||| ||||||||| ||| | || ||||||||||||||| | |||||    
T  31303358 gattggtagacacccttaatgtgtacatccatttgtatcactctgaaaaatttcagtcaaccaaatacatggtctgcgtgaccacattttttcaattgcg 31303457  T
Q  161 tgacca 166  Q
    ||||||    
T  31303458 tgacca 31303463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 365
Target Start/End: Original strand, 31303553 - 31303661
Alignment:
Q  256 atagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtg 355  Q
    |||||||||||||| || ||||||||||||||| || ||||| || || ||| |||||||||||   ||||| || ||| ||||||| ||||||| ||||    
T  31303553 atagtggtcacgcaact-aaaaaatgtggtcacacataccatatattttgttaactgaaatttttttgagtggtataaaaggatgtagacattaaaggtg 31303651  T
Q  356 tctaccaatc 365  Q
    ||||||||||    
T  31303652 tctaccaatc 31303661  T

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Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 5174998 - 5174910
Alignment:
Q  139 gtgaccacatttttt-agttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcatttta 226  Q
    ||||||||||||||| | | ||||||||| ||  ||| ||||||||||||| ||||||||||| ||||||||||||||| | |||||||    
T  5174998 gtgaccacatttttttaatcgcgtgaccactaatttttcagaatttatttgattaactaagtgtaaaaatagtggtcacgcacatttta 5174910  T

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Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 77 - 153
Target Start/End: Original strand, 22032981 - 22033056
Alignment:
Q  77 ttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt 153  Q
    ||||||| ||||||||||  ||||||| |  ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  22032981 ttaatgtgtacatcctttg-taccactctttaaaatttaagttaaccaaatatatggtatgtgtgaccacatttttt 22033056  T

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Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 22033253 - 22033147
Alignment:
Q  77 ttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttc 175  Q
    ||||||| ||||||||||  ||||| | | |||||||| ||||||||||||||||| | |||||||||| ||||||| ||||||||||||| ||| |||     
T  22033253 ttaatgtgtacatcctttg-taccattctgaaaaattttagttaaccaaatatatggtctgtgtgaccatattttttgagttgcgtgaccactat-tttt 22033156  T
Q  176 cagaattta 184  Q
    |||||||||    
T  22033155 cagaattta 22033147  T

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Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 222 - 264
Target Start/End: Original strand, 2887188 - 2887230
Alignment:
Q  222 ttttagttgcgtgaccacatttttcagcttctaaatagtggtc 264  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  2887188 ttttagttgcgtaaccacatttttcagcttctaaatagtggtc 2887230  T

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Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 15958472 - 15958416
Alignment:
Q  108 aaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgac 164  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||| |||||| ||||    
T  15958472 aaaatttcagttaactaaatatatggtctgtgtgaccacatttttaagttgcatgac 15958416  T

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Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 254 - 335
Target Start/End: Complemental strand, 15958324 - 15958243
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaat 335  Q
    ||||||||||||| || || ||||||||||||||| | |||||| || |||||| ||| ||||||| || ||||||| ||||    
T  15958324 aaatagtggtcacacaactaaaaaaatgtggtcacactgaccatatatttggttaacttaaatttttcaaagtgatataaat 15958243  T

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Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 351
Target Start/End: Complemental strand, 22033056 - 22032980
Alignment:
Q  274 aaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaag 351  Q
    ||||||||||||||| || ||||| || |||||| ||| |||||||  |||||| |||||| ||||||||||||||||    
T  22033056 aaaaaatgtggtcacacataccatatatttggttaacttaaattttaaagagtggtacaaa-ggatgtacacattaag 22032980  T

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Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 5083803 - 5083697
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    |||||||||||||| | || |||||||||||||||  ||||||| || ||| || ||||||||||| || ||||||| ||| || | || | |||||||     
T  5083803 aaatagtggtcacgtaact-aaaaaatgtggtcacaaagaccatatatttgattaactgaaatttttcaaagtgatataaaggggtatatagattaagga 5083705  T
Q  354 tgtctacc 361  Q
    ||||||||    
T  5083704 tgtctacc 5083697  T

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Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 5083949 - 5083890
Alignment:
Q  108 aaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgacca 166  Q
    ||||||||| || | |||||||||| |||||||||||||||||||| | |||||||||||    
T  5083949 aaaatttcaattcatcaaatatatggtatgtgtgaccacattttttcaattgcgtgacca 5083890  T

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Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 20556717 - 20556776
Alignment:
Q  108 aaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgacca 166  Q
    ||||||||||||||||||||||||| |  ||||||||| ||||||| ||||| |||||||    
T  20556717 aaaatttcagttaaccaaatatatggtcggtgtgaccatattttttcagttgtgtgacca 20556776  T

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Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 22740152 - 22740069
Alignment:
Q  274 aaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtc 357  Q
    ||||||||||||||| |||||||| || ||| || ||| |||| || |||||||||||| |  | ||||||||||||| |||||    
T  22740152 aaaaaatgtggtcacacagaccatatatttgattaacttaaatatttcagagtgatacatagaggtgtacacattaagagtgtc 22740069  T

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Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 18312924 - 18313026
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    |||||||||||||||| || ||||||| | | ||| || ||||| || ||||||  |||||||||| ||||||| |||||| |  ||| ||||||||| |    
T  18312924 aaatagtggtcacgcaactaaaaaaatttagccacacaaaccatatatttggttagctgaaatttttcagagtggtacaaaggagtgtgcacattaagag 18313023  T
Q  354 tgt 356  Q
    |||    
T  18313024 tgt 18313026  T

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Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 361
Target Start/End: Original strand, 4290927 - 4291031
Alignment:
Q  257 tagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgt 356  Q
    ||||||||||||| || |||||| |||||||  |||| ||| || |||||| ||||||||||| || |||  ||||||  |||  ||||||||| ||| |    
T  4290927 tagtggtcacgcaactaaaaaaacgtggtcatacagatcatttatttggttaactgaaatttttcaaagtagtacaaagagattgacacattaaaggtat 4291026  T
Q  357 ctacc 361  Q
    |||||    
T  4291027 ctacc 4291031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 165; Significance: 4e-88; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 97 - 372
Target Start/End: Original strand, 38606763 - 38607039
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttccagaatttatttggttaact 195  Q
    ||||||| | |||||||||||||||| ||||||||| |||||||||||| ||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  38606763 taccactctgaaaaatttcagttaactaaatatatggtatgtgtgaccatatttttttagctgcgtgaccactatgtttccagaatttatttggttaact 38606862  T
Q  196 aagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagacc 295  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||    
T  38606863 aagtggaaaaatagtggtcacacgcattttcgttgcgtgaccacatttttcagcttctaaatagtggtaacgcaactgaaaaaatgtggtcacgcaaacc 38606962  T
Q  296 atgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    || ||  | ||| |||||||||||  |||||  |||||| || |||||||||||||| ||||||||||| |||||||    
T  38606963 atatatgtagttaactgaaattttggagagttgtacaaaggggtgtacacattaaggatgtctaccaatatttattc 38607039  T

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Target: chr8; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 135 - 372
Target Start/End: Original strand, 1251450 - 1251687
Alignment:
Q  135 atgtgtgaccacattt-tttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgt 233  Q
    |||||||||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||  |||||||||||| | | |||||||||| | |    
T  1251450 atgtgtgaccacatttgtttagttgcgtgaccactatttttccataatttatttggttaactaagtgggaaaatagtggtcgcgcacattttagtt-cat 1251548  T
Q  234 gaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaa 333  Q
    || |||||||||||| || ||||||||||||||||| |||||||||||||||| | || | ||| || || ||| |||||||||||| |||||| |||||    
T  1251549 gatcacatttttcaggttttaaatagtggtcacgcaactgaaaaaatgtggtctcacaaatcatatatttagttaactgaaattttcgagagtggtacaa 1251648  T
Q  334 atggatgtacacattaagggtgtctaccaatctttattc 372  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  1251649 atgggtgtacacattaaggatgtctaccaatctttattc 1251687  T

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Target: chr8; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 93 - 373
Target Start/End: Original strand, 5321892 - 5322176
Alignment:
Q  93 tttataccactttaaaaaatttc-agttaaccaaatatatgatatgtgtgaccacatttt-ttagttgcgtgaccattatgtttccagaatttatttggt 190  Q
    |||||||| |||| ||||||||  ||||||  |||||||||  ||||||||||||||||| ||||||||||||||| ||| |||  ||||||||||||||    
T  5321892 tttatacctctttgaaaaattttgagttaattaaatatatggcatgtgtgaccacatttttttagttgcgtgaccactatttttttagaatttatttggt 5321991  T
Q  191 taactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgc 290  Q
    |||||||||| ||||||||||||||| | |||||||||||||||| || ||||||||||||||||||| || |||||||  |||||||||||| |||| |    
T  5321992 taactaagtggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaataatgatcacgcaattgaaaaaatgtgatcacac 5322091  T
Q  291 agaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacac--attaagggtgtctaccaatctttattca 373  Q
    ||||||| || |||||| | |||||||||  ||||||||||||| |  |||||||  ||||||||| |||||| |||||| ||||    
T  5322092 agaccatatatttggttaattgaaatttttgagagtgatacaaaggagtgtacacatattaagggtttctaccgatctttgttca 5322176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 68 - 297
Target Start/End: Original strand, 15714601 - 15714831
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttt-ttagttgcgtgacca 166  Q
    |||||||||||||| | ||||   |||| ||||||| | |||||||||||||| | ||||||||||| | |||||||||||||| |||||||||||||||    
T  15714601 tagacacctttaatatgtacacatttttgtaccactctgaaaaatttcagttagctaaatatatgatttatgtgaccacattttgttagttgcgtgacca 15714700  T
Q  167 ttatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcac 266  Q
     ||| ||| |  |||||||||||||||||||||| |||||||||||||||   |||||||||| |||||||| |||||||||||| |||||||| |||||    
T  15714701 ctattttttcgaaatttatttggttaactaagtggaaaaatagtggtcacggacattttagttacgtgaccatatttttcagcttttaaatagtagtcac 15714800  T
Q  267 gcagctgaaaaaatgtggtcacgcagaccat 297  Q
     |||||||||||||||||| || ||||||||    
T  15714801 acagctgaaaaaatgtggttacacagaccat 15714831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 59 - 362
Target Start/End: Complemental strand, 5573992 - 5573688
Alignment:
Q  59 aatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatga-tatgtgtgaccacatttttt-agt 156  Q
    |||||| | ||||| |||||||||| ||||  ||||| ||||||| ||||| |||||||||||| ||||||||   | | |||||||||||||||| | |    
T  5573992 aatgataggtagactcctttaatgtgtacactcttttgtaccactctaaaagatttcagttaactaaatatatatgtctttgtgaccacatttttttaat 5573893  T
Q  157 tgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaa 256  Q
    |||||||||| ||| |||| | |||||||||||||||||||||| |||||||||||||||   |||||||||| | ||||||||||||||| ||||||||    
T  5573892 tgcgtgaccactatttttcaa-aatttatttggttaactaagtggaaaaatagtggtcacgtgcattttagttccatgaccacatttttcaacttctaaa 5573794  T
Q  257 tagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgt 356  Q
    |||||||||||||  ||||||||||| |||||  | | ||| || |||||| |||||||| ||| ||| ||||||||| || ||||||||  |||| |||    
T  5573793 tagtggtcacgcaattgaaaaaatgtagtcacatatatcatatatttggttaactgaaatgttcgagaatgatacaaaagggtgtacacacaaaggatgt 5573694  T
Q  357 ctacca 362  Q
    ||||||    
T  5573693 ctacca 5573688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 119 - 372
Target Start/End: Complemental strand, 31596947 - 31596693
Alignment:
Q  119 taaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccatta-tgtttccagaatttatttggttaactaagtgaaaaaatagtggtcac 216  Q
    |||| ||||||||||| |||||||| | ||||||| ||||| |||||||||| | |||||| ||||||||||||||| |||||| |||||||||| | ||    
T  31596947 taactaaatatatgatttgtgtgactatatttttttagttgtgtgaccattagtttttccataatttatttggttaattaagtggaaaaatagtgattac 31596848  T
Q  217 actcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaat 316  Q
    || ||||| |||||  ||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||| || ||||| || ||| || |||| |||    
T  31596847 acgcattt-agttgtctgaccacatttttcatcttctaaatagtggtaacgcaactgaaaaaatgtggtcacacataccatatatttgattaactgtaat 31596749  T
Q  317 tttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    ||| || |||| ||||||  | |||||| |||||| ||||||||||||||||||||    
T  31596748 ttttcaaagtggtacaaagaggtgtacatattaagagtgtctaccaatctttattc 31596693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 92 - 288
Target Start/End: Original strand, 26493267 - 26493463
Alignment:
Q  92 ttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatt-ttttagttgcgtgaccattatgtttccagaatttatttggt 190  Q
    ||||||||||||||||||||||| | |||| |||||||||| | | |||||||||||| ||||||||||| ||||||||  ||| ||||||||||||| |    
T  26493267 ttttataccactttaaaaaattttacttaatcaaatatatggtctatgtgaccacattgttttagttgcgcgaccattaatttttcagaatttatttgat 26493366  T
Q  191 taactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcac 288  Q
    ||||||| || ||||||||| ||||| | ||||| ||||||||||||||||||||||||||||||||||| || || || ||||||||||||| ||||    
T  26493367 taactaaatggaaaaatagttgtcacgcgcattt-agttgcgtgaccacatttttcagcttctaaatagtagttacacaactgaaaaaatgtgatcac 26493463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 116 - 372
Target Start/End: Original strand, 31273516 - 31273773
Alignment:
Q  116 agttaaccaaatatatgatatgtgtgaccacatttt-ttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtc 214  Q
    ||||||||||||| || |||| ||||||||||| || |||||||||||| ||  || |||  ||||||||||||||||||| ||||||||||||| | ||    
T  31273516 agttaaccaaataaataatatatgtgaccacatcttgttagttgcgtgatcaccattttttaagaatttatttggttaacttagtgaaaaaatagcgttc 31273615  T
Q  215 acactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaa 314  Q
    ||   |||||||| ||| |||||| |||||||||||||||||||| ||||||||| ||||||| |||||| |||  ||||||| || ||| || | ||||    
T  31273616 acgtgcattttagctgcatgaccatatttttcagcttctaaataggggtcacgcaactgaaaacatgtggccacatagaccatatatttgattaattgaa 31273715  T
Q  315 attttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    |||||| |||||| ||||||  | | ||||||||||| || |||||||||||||||||    
T  31273716 attttcgagagtggtacaaaaaggtatacacattaagagtatctaccaatctttattc 31273773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 33286263 - 33286115
Alignment:
Q  224 ttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccag 323  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||| || |||||| | | || ||||  ||    
T  33286263 ttagttgcgtgaccacatttttcagcttctaaaaagtggtcacgcaattgaaaaaatgtggtcacgcagaccatatatttggttaattaaatttttttag 33286164  T
Q  324 agtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    || | ||||||||| ||||||||||||||||||| ||||||||||||||    
T  33286163 aggggtacaaatgggtgtacacattaagggtgtccaccaatctttattc 33286115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 135 - 286
Target Start/End: Original strand, 1240874 - 1241025
Alignment:
Q  135 atgtgtgaccacattt-tttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgt 233  Q
    |||||||| ||||||| |||||||| ||||||| ||| |||||| ||||||||||||||||||||||  |||||||||||||| | |||||||||| | |    
T  1240874 atgtgtgaacacatttgtttagttgtgtgaccactatttttccataatttatttggttaactaagtgggaaaatagtggtcacgcacattttagtt-cat 1240972  T
Q  234 gaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtc 286  Q
    ||||||||||||||||||||||||||||||||| || |||||||||| |||||    
T  1240973 gaccacatttttcagcttctaaatagtggtcacacaactgaaaaaatatggtc 1241025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 182 - 352
Target Start/End: Original strand, 29367076 - 29367245
Alignment:
Q  182 ttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatg 281  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||||||     
T  29367076 ttatttggttaactaagtggaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttcaaaatagtggtcacacaattgaaaaaata 29367175  T
Q  282 tggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagg 352  Q
    |||| ||  ||||||| || || ||| | | |||||||| |||||||||| || || ||||||||||||||    
T  29367176 tggttacatagaccatatatttagttaattaaaattttcaagagtgatac-aaggggtgtacacattaagg 29367245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 286
Target Start/End: Original strand, 24575842 - 24576023
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatt-ttttagttgcgtgaccattatgtttccagaatttatttggttaact 195  Q
    |||||||||||||| |||| |||||||||||||||| | |||| ||||| ||| |||||||||  |||||| ||| |||||||||||||||||||||| |    
T  24575842 taccactttaaaaagtttcggttaaccaaatatatggtctgtgcgaccatattattttagttgtctgaccactatttttccagaatttatttggttaaat 24575941  T
Q  196 aagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtc 286  Q
    |||||||||||||||||||||      ||  ||   |||  ||||||||||||||||||||||||||| ||| | || |||||||||||||    
T  24575942 aagtgaaaaaatagtggtcac------ttgcgt---gtggtcacatttttcagcttctaaatagtggtaacgaaactcaaaaaatgtggtc 24576023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 373
Target Start/End: Complemental strand, 32959628 - 32959457
Alignment:
Q  202 aaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtac 301  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||| ||||||| ||| ||||||||| |  |||||||||||| |||| || | ||||||     
T  32959628 aaaaatagtggtcacacacattttagttgtgtgaccatattttttagcttcttaatggtggtcacgtaattgaaaaaatgtgatcacacaaatcatgtat 32959529  T
Q  302 ttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattca 373  Q
    |||||| |  |||| |||||| | |  ||||||  | |||| |||| || ||||||||||||||||||||||    
T  32959528 ttggttaatcgaaaatttccataattgtacaaagtggtgtagacataaaaggtgtctaccaatctttattca 32959457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 107 - 216
Target Start/End: Original strand, 26914637 - 26914746
Alignment:
Q  107 aaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaa 206  Q
    |||||||| || |||| ||||||||||| ||||||| |||||||||||||| |||||||| ||| |||| ||||||||||||||||| | |||| |||||    
T  26914637 aaaaatttaagctaactaaatatatgatttgtgtgatcacattttttagttacgtgaccactatttttcaagaatttatttggttaattgagtggaaaaa 26914736  T
Q  207 tagtggtcac 216  Q
    || |||||||    
T  26914737 taatggtcac 26914746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 108 - 261
Target Start/End: Complemental strand, 6809959 - 6809804
Alignment:
Q  108 aaaatttcagttaaccaaatatatgatatgtgtgaccacattttt-tagttgcgtgaccattatgtttc-cagaatttatttggttaactaagtgaaaaa 205  Q
    |||||||||||||| |||||||||  ||||||||||||||||||| |||||| ||||  | ||| |||| || ||||||||||||||| ||| || ||||    
T  6809959 aaaatttcagttaatcaaatatatagtatgtgtgaccacatttttatagttgtgtgataactatttttctcataatttatttggttaattaaatggaaaa 6809860  T
Q  206 atagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtg 261  Q
    ||||||||||||   |||||||| | || ||||||||||| | ||| |||||||||    
T  6809859 atagtggtcacatgtattttagtcgagtaaccacattttttatcttttaaatagtg 6809804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 281 - 371
Target Start/End: Original strand, 24576180 - 24576270
Alignment:
Q  281 gtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttatt 371  Q
    |||||||| |||||||| || |||||| | |||||||||| |||||| |||||| || ||||||||||| |||||||||||||||||||||    
T  24576180 gtggtcacacagaccatatatttggttaattgaaattttcgagagtggtacaaaggggtgtacacattacgggtgtctaccaatctttatt 24576270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 15233318 - 15233241
Alignment:
Q  180 atttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaat 257  Q
    |||||||||||||| |||||||||||||||||||||  | |||||||||||||||||||| ||||||| ||| |||||    
T  15233318 atttatttggttaattaagtgaaaaaatagtggtcatgcgcattttagttgcgtgaccacgtttttcaacttttaaat 15233241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 166
Target Start/End: Complemental strand, 1251680 - 1251575
Alignment:
Q  62 gattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcg 160  Q
    ||||| |||||| | ||||||| |||| || ||| ||||||| |  ||||||||||||||| ||||||||||| |||| ||||||||||||| |||||||    
T  1251680 gattggtagacatccttaatgtgtacacccatttgtaccactctcgaaaatttcagttaactaaatatatgatttgtgagaccacattttttcagttgcg 1251581  T
Q  161 tgacca 166  Q
    ||||||    
T  1251580 tgacca 1251575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 31596735 - 31596805
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgacca 166  Q
    ||||||||| ||||||| ||||||| |||||||||| |||||||||||||||||||| |||||||| ||||    
T  31596735 taccactttgaaaaattacagttaatcaaatatatggtatgtgtgaccacattttttcagttgcgttacca 31596805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 38606837 - 38606732
Alignment:
Q  256 atagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtg 355  Q
    ||||||||||||||||| ||||||| ||||||| || ||||| || || ||| ||||||||||| ||||||| |||||| || | || | ||||||| ||    
T  38606837 atagtggtcacgcagctaaaaaaatatggtcacacataccatatatttagttaactgaaatttttcagagtggtacaaaggggtctaaagattaaggatg 38606738  T
Q  356 tctacc 361  Q
    ||||||    
T  38606737 tctacc 38606732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 58 - 258
Target Start/End: Original strand, 24537873 - 24538078
Alignment:
Q  58 caatgattgctagacacctttaatgtctacatccttttataccactttaaaaaa---tttcagttaaccaaatatatgatatgtgtgaccacatttttta 154  Q
    ||||||| | || ||||| ||||||| |||| |  ||| ||||||| |||||||   ||||| ||||| ||||||||| |||| |||||||||||||||     
T  24537873 caatgatagatatacacccttaatgtatacaccaatttgtaccactctaaaaaaatatttcaattaactaaatatatggtatgagtgaccacattttttt 24537972  T
Q  155 g---ttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagctt 251  Q
        ||| ||||||| ||  |||||| |||||||||||||||| |  || |||||||||||| |||| | ||  |||| | |||||| |||||| |||||    
T  24537973 aattttgtgtgaccactaattttccaaaatttatttggttaaccatatggaaaaatagtggtaacacgcgttgcagttacatgaccatattttt-agctt 24538071  T
Q  252 ctaaata 258  Q
    |||||||    
T  24538072 ctaaata 24538078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 70 - 184
Target Start/End: Original strand, 28700053 - 28700166
Alignment:
Q  70 gacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgaccatta 169  Q
    |||| ||||||||| |||||| |||| || || | |||||||||||||||||| ||||||||| | | |||||||| ||||||| ||||| ||||   ||    
T  28700053 gacatctttaatgtgtacatcattttgtatcattctaaaaaatttcagttaactaaatatatggt-tatgtgaccatattttttcgttgcatgacttcta 28700151  T
Q  170 tgtttccagaattta 184  Q
    | |||||||||||||    
T  28700152 tttttccagaattta 28700166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 5573734 - 5573790
Alignment:
Q  111 atttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgacca 166  Q
    |||||||||||||||||||||||||| |||||| ||||||||| | |||||||||||    
T  5573734 atttcagttaaccaaatatatgatatatgtgactacattttttcaattgcgtgacca 5573790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 184
Target Start/End: Original strand, 15233134 - 15233245
Alignment:
Q  73 acctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgaccattatgt 172  Q
    ||||||||||| ||||||  ||  ||||| | | ||||||||||||||| |||||||||| | | || || ||||||||| |||| |||||||| ||| |    
T  15233134 acctttaatgtgtacatctcttcgtaccaatctgaaaaatttcagttaatcaaatatatggtctctgcgatcacatttttcagttacgtgaccactattt 15233233  T
Q  173 ttccagaattta 184  Q
    |||||| |||||    
T  15233234 ttccagcattta 15233245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 28700317 - 28700239
Alignment:
Q  93 tttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttt-ttagttgcgtgaccattat 170  Q
    ||||||||||| || ||||| | ||||||||||||||||| |  || |||||||||||| ||||||||||||| |||||    
T  28700317 tttataccactctagaaaatctaagttaaccaaatatatgttcagtatgaccacattttgttagttgcgtgacaattat 28700239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 33286130 - 33286227
Alignment:
Q  70 gacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgacca 166  Q
    |||||| ||||||| |||| || ||| |||| || ||||||| || | ||||||||||||||| | || ||||||||||||||| | |||||||||||    
T  33286130 gacacccttaatgtgtacacccatttgtacccctctaaaaaaatttaattaaccaaatatatggtctgcgtgaccacattttttcaattgcgtgacca 33286227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 170
Target Start/End: Complemental strand, 5322121 - 5322057
Alignment:
Q  107 aaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattat 170  Q
    |||||||||| ||||||||||||||| | ||||||| |||||||||| | |||||||| ||||||    
T  5322121 aaaaatttcaattaaccaaatatatggtctgtgtgatcacattttttcaattgcgtgatcattat 5322057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 24576264 - 24576180
Alignment:
Q  62 gattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccac 146  Q
    ||||| ||||||||  |||||| |||| || ||| ||||||| |  ||||||||| ||||||||||||||| | |||||||||||    
T  24576264 gattggtagacacccgtaatgtgtacacccctttgtaccactctcgaaaatttcaattaaccaaatatatggtctgtgtgaccac 24576180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 24920134 - 24920075
Alignment:
Q  122 ccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttccagaa 180  Q
    ||||||||||| |||||||||||||||||||| || |||||||||| ||| ||| |||||    
T  24920134 ccaaatatatgttatgtgtgaccacattttttaaggtgcgtgaccactattttttcagaa 24920075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 297
Target Start/End: Original strand, 40502175 - 40502218
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccat 297  Q
    |||||||||||||||| || ||||||||||||||| ||||||||    
T  40502175 aaatagtggtcacgcaccttaaaaaatgtggtcacacagaccat 40502218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 180
Target Start/End: Complemental strand, 24919925 - 24919863
Alignment:
Q  119 taaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttccagaa 180  Q
    |||||||||||||| | |||||||||||||||||| || |||||||||| ||| ||| |||||    
T  24919925 taaccaaatatatgttctgtgtgaccacattttttaaggtgcgtgaccactattttttcagaa 24919863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 24919871 - 24919924
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggtt 307  Q
    |||||||||||||||| || ||||||||||||||| |||| ||| || ||||||    
T  24919871 aaatagtggtcacgcaccttaaaaaatgtggtcacacagaacatatatttggtt 24919924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 26493503 - 26493449
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt 153  Q
    ||||||||| |||||||||| ||||||||||||||  | ||||||| ||||||||||    
T  26493503 taccacttttaaaaatttcaattaaccaaatatat--tttgtgtgatcacatttttt 26493449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 166
Target Start/End: Complemental strand, 38607031 - 38606927
Alignment:
Q  63 attgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgt 161  Q
    |||| |||||| | ||||||| |||| || ||| ||| ||| |  ||||||||||||||| | ||||||| | || ||||||||||||||| ||||||||    
T  38607031 attggtagacatccttaatgtgtacacccctttgtacaactctccaaaatttcagttaactacatatatggtttgcgtgaccacattttttcagttgcgt 38606932  T
Q  162 gacca 166  Q
     ||||    
T  38606931 tacca 38606927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 3e-83; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 107 - 372
Target Start/End: Complemental strand, 3823815 - 3823549
Alignment:
Q  107 aaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaa 206  Q
    ||||||| |||||||||||||||||  | ||||||||||| ||||||||||||||||||| ||| |||||| |||||||||||||||||||||| |||||    
T  3823815 aaaaattccagttaaccaaatatattgtctgtgtgaccacgttttttagttgcgtgaccactatttttccataatttatttggttaactaagtggaaaaa 3823716  T
Q  207 tagtggtcacactcattttagttgcgtgaccacattttt--cagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttg 304  Q
     ||||||||||| ||||||||||||||||||| ||||||  |||||| ||||||||||||||||| | |||||||||||||||| |||||||| || |||    
T  3823715 -agtggtcacacgcattttagttgcgtgaccatatttttttcagcttataaatagtggtcacgcaacagaaaaaatgtggtcacacagaccatataattg 3823617  T
Q  305 gttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    ||| |||||||||||| |||||| |||||| || |||||||||||||||||||||| |||||||||||    
T  3823616 gttaactgaaattttcgagagtggtacaaaggggtgtacacattaagggtgtctactaatctttattc 3823549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 107 - 372
Target Start/End: Complemental strand, 3786125 - 3785860
Alignment:
Q  107 aaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaa 206  Q
    ||||||| |||||||||||||||||  | ||||||||||| ||||||||||||||||||| ||| |||||| |||||||||||||||||||||| |||||    
T  3786125 aaaaattccagttaaccaaatatattgtctgtgtgaccacgttttttagttgcgtgaccactatttttccataatttatttggttaactaagtggaaaaa 3786026  T
Q  207 tagtggtcacactcattttagttgcgtgaccacattttt-cagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttgg 305  Q
     ||||||||| | ||||||||||||||||||| |||||| |||||| ||||||||||||||| | | |||||||||||||||| ||||||||  | ||||    
T  3786025 -agtggtcacgcgcattttagttgcgtgaccatattttttcagcttataaatagtggtcacgtaacagaaaaaatgtggtcacacagaccataaaattgg 3785927  T
Q  306 ttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    || |||||||||||| |||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  3785926 ttaactgaaattttcgagagtggtacaaaggggtgtacacattaagggtgtctaccaatctttattc 3785860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 68 - 326
Target Start/End: Original strand, 42637865 - 42638121
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgaccat 167  Q
    |||||||| |||||||  |||||| ||| |||||||   |||||||||| |||||||||||||| || ||||||||| ||| |||||||||  ||||||     
T  42637865 tagacacccttaatgtgcacatccctttgtaccactg--aaaaatttcaattaaccaaatatattatttgtgtgaccgcatattttagttgtctgaccac 42637962  T
Q  168 tatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacg 267  Q
    ||| ||| ||||||||||||||||||||||||  |||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42637963 tattttttcagaatttatttggttaactaagttgaaaaatagtggttacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacg 42638062  T
Q  268 cagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagt 326  Q
    || |||||||||||||||||   | ||||| || || ||| |||||||||||| |||||    
T  42638063 caactgaaaaaatgtggtcatatataccatatatttagttaactgaaattttcgagagt 42638121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 59 - 372
Target Start/End: Complemental strand, 19280409 - 19280098
Alignment:
Q  59 aatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttta-gtt 157  Q
    |||||| | |||||||| ||||||| |||| || ||| ||||||| | |||| ||| |||||| |||||||||| | |||||||| |||||||||| ||     
T  19280409 aatgataggtagacacccttaatgtgtacacccgtttgtaccactctgaaaatttttagttaatcaaatatatggtctgtgtgacaacattttttaagtg 19280310  T
Q  158 gcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaat 257  Q
    | ||||||| ||  ||| || |||||||||||||||||||||| |||| |||||||||| |  ||||||||||||||||||||||||||| ||||||||     
T  19280309 gtgtgaccactaatttttcaaaatttatttggttaactaagtggaaaa-tagtggtcacgcgaattttagttgcgtgaccacatttttcaacttctaaac 19280211  T
Q  258 agtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtc 357  Q
    |||||||||||| |||||||||||||||||| |||||||| || |||||| ||| |||| ||    |||| |||||| || ||||||| |||||||||||    
T  19280210 agtggtcacgcatctgaaaaaatgtggtcactcagaccatatatttggttaactaaaatatt--ttagtggtacaaaggggtgtacactttaagggtgtc 19280113  T
Q  358 taccaatctttattc 372  Q
    |||| ||||||||||    
T  19280112 taccgatctttattc 19280098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 107 - 297
Target Start/End: Complemental strand, 5342040 - 5341849
Alignment:
Q  107 aaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaa 205  Q
    ||||||||||||||| | |||||||| | |||||||||||||||||| ||||| || |||||||||||| ||||||||||||||||||||||||| ||||    
T  5342040 aaaaatttcagttaatcgaatatatggtctgtgtgaccacatttttttagttgtgtaaccattatgttttcagaatttatttggttaactaagtggaaaa 5341941  T
Q  206 atagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccat 297  Q
    |||||||||| |   ||||||||||  ||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||| || |||||    
T  5341940 atagtggtcatatgtattttagttgtatgaccacatttttcaacttctaaatagtggtcacgcagctaaaaaaatatggtcacacaaaccat 5341849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 68 - 334
Target Start/End: Original strand, 26308546 - 26308813
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatt-ttttagttgcgtgacca 166  Q
    |||||||||||||| | ||||   |||| || |||||| |||||| ||||||||| ||||||||| | |||||||||||||| ||||||||| |||||||    
T  26308546 tagacacctttaatatgtacacttttttgtatcactttgaaaaatatcagttaactaaatatatggtttgtgtgaccacattgttttagttgtgtgacca 26308645  T
Q  167 ttatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcac 266  Q
     ||  |||||||||||||||||||||| |||||| ||||||||||||||| | ||||||| ||||||||||||||| ||||||||||||||||||||| |    
T  26308646 ctaattttccagaatttatttggttaagtaagtggaaaaatagtggtcacgcgcattttaattgcgtgaccacattattcagcttctaaatagtggtccc 26308745  T
Q  267 gcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaa 334  Q
      |  || |||||||||| ||| || ||||| || ||| || ||||||| ||| |||||| |||||||    
T  26308746 agaattggaaaaatgtggccacacaaaccatatatttgattaactgaaaattttcagagttatacaaa 26308813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 77 - 372
Target Start/End: Complemental strand, 22432524 - 22432235
Alignment:
Q  77 ttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttc 175  Q
    ||||||| |||| |||||| || |||||| |||||||| ||| || |||||||||| | |||||||| ||||||||| |||||| |||||| ||| |||     
T  22432524 ttaatgtgtacacccttttgtagcactttgaaaaatttgagtaaatcaaatatatggtctgtgtgactacatttttttagttgcatgaccactatttttt 22432425  T
Q  176 cagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaa 275  Q
    || |||||||||||| ||||| ||| ||||||||||| ||||| |||||||||||  ||||||||||||||||||| |||||||||| |||||| |||||    
T  22432424 cataatttatttggtcaactatgtggaaaaatagtggacacacgcattttagttgattgaccacatttttcagcttttaaatagtggacacgcaactgaa 22432325  T
Q  276 aaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    ||||| ||||       ||||| |  ||| || |||||||||||| ||||| ||||||    ||||||||||||||| || ||||||||||||||||    
T  22432324 aaaatatggt-------accatatttttgattaactgaaattttcgagagtaatacaaggatatgtacacattaaggatgcctaccaatctttattc 22432235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 76 - 283
Target Start/End: Complemental strand, 31545811 - 31545603
Alignment:
Q  76 tttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgttt 174  Q
    |||||| | |||||| |||| || |||| | ||||||||||| ||||| |||||||| | | |||||||||||||||| ||||| ||||||| ||| |||    
T  31545811 tttaatatgtacatctttttgtatcactctgaaaaatttcaggtaacctaatatatggtctatgtgaccacatttttttagttgtgtgaccactattttt 31545712  T
Q  175 ccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctga 274  Q
    ||||||||||||| |||||||||||  ||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||||||| || || ||||    
T  31545711 ccagaatttattttgttaactaagtagaaaaatagtggtcatgcacattttagttgtgtgaccacatttttcagcttctaaatagtggttactcaactga 31545612  T
Q  275 aaaaatgtg 283  Q
    |||||||||    
T  31545611 aaaaatgtg 31545603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 97 - 356
Target Start/End: Original strand, 1705605 - 1705863
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttt-ttagttgcgtgaccattatgtttccagaatttatttggttaact 195  Q
    ||||||| | |||||||| |||| || ||||||||| | |||||||  | ||||| |||||||  |||||| ||  ||||||||| ||||||||||||||    
T  1705605 taccactctgaaaaatttaagtttactaaatatatggtttgtgtgattatatttttttagttgtatgaccactagttttccagaaattatttggttaact 1705704  T
Q  196 aagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagacc 295  Q
    ||| | ||||||||||||||| | |||||||||||| |||||| |||||||||||||||||||||||||||||| ||  |||||| || |||| || | |    
T  1705705 aaggggaaaaatagtggtcacgcgcattttagttgcatgaccatatttttcagcttctaaatagtggtcacgcaact--aaaaatatgatcacacatatc 1705802  T
Q  296 atgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgt 356  Q
    ||||| |||||| |||||||||||  | | ||||||| | |||||||||||||||||||||    
T  1705803 atgtatttggttaactgaaattttttacaatgatacacaaggatgtacacattaagggtgt 1705863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 107 - 372
Target Start/End: Complemental strand, 44080420 - 44080154
Alignment:
Q  107 aaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaa 205  Q
    ||||||||||||||| |||  ||||  | ||||| |||||||||||| ||||| | ||||| ||| |||||| ||||| |||||||||||||||| ||||    
T  44080420 aaaaatttcagttaatcaaggatatagtctgtgttaccacatttttttagttgtgcgaccactatttttccaaaatttttttggttaactaagtggaaaa 44080321  T
Q  206 atagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctg-aaaaaatgtggtcacgcagaccatgtacttg 304  Q
    ||||||| ||| | ||||||||||  |||||||||||||||| ||||||||||||||||||||| ||| ||||||| ||||||| ||||  || || |||    
T  44080320 atagtgggcacgcacattttagtt-tgtgaccacatttttcaacttctaaatagtggtcacgcaactgcaaaaaatatggtcacacagattatatatttg 44080222  T
Q  305 gttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    ||| ||||||||| | ||||||| ||||||   ||||||||||||||| | |||| | ||||||||||    
T  44080221 gttaactgaaattgttcagagtggtacaaagatatgtacacattaaggatatctatcgatctttattc 44080154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 176 - 372
Target Start/End: Original strand, 9710739 - 9710929
Alignment:
Q  176 cagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaa 275  Q
    ||||||||||||||||||||||||| |||||||||||||| | |   |||||||||||||||||| |||||||||||||| ||||||||||||| | |||    
T  9710739 cagaatttatttggttaactaagtggaaaaatagtggtca-agtgtatttagttgcgtgaccacagttttcagcttctaagtagtggtcacgcaaccgaa 9710837  T
Q  276 aaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    ||||| ||||||     ||||| || |||||| ||||||||||| ||||||| |||||| || |||||| ||||||||| |||||||||||||||||    
T  9710838 aaaatatggtca-----accatatatttggttaactgaaatttttcagagtggtacaaaggggtgtacatattaagggtttctaccaatctttattc 9710929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 107 - 269
Target Start/End: Original strand, 4169053 - 4169213
Alignment:
Q  107 aaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaa 205  Q
    |||||||||||||||||||   |||| |||| |||||| |||||||| |||||| |||| | ||| ||| |||||||||||||||||||||| || ||||    
T  4169053 aaaaatttcagttaaccaa---tatggtatgcgtgacctcattttttcagttgcatgactactattttttcagaatttatttggttaactaaatggaaaa 4169149  T
Q  206 atagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgca 269  Q
    ||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4169150 atagtggtcacgcacattttagttgcgttaccacatttttcagcttctaaatagtggtcacgca 4169213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 93 - 231
Target Start/End: Complemental strand, 11501448 - 11501309
Alignment:
Q  93 tttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccaca-ttttttagttgcgtgaccattatgtttccagaatttatttggtt 191  Q
    |||||||||||||| ||||||| ||||||||||||||||||| ||||||||| || |||||||||||||| | || ||| |||  | |||||||||||||    
T  11501448 tttataccactttagaaaatttaagttaaccaaatatatgatctgtgtgaccgcagttttttagttgcgttagcactatttttttaaaatttatttggtt 11501349  T
Q  192 aactaagtgaaaaaatagtggtcacactcattttagttgc 231  Q
    |||||| || ||||||||||||||| | ||||||||||||    
T  11501348 aactaattggaaaaatagtggtcacgcacattttagttgc 11501309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 11509969 - 11509804
Alignment:
Q  204 aaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtactt 303  Q
    |||||| |||||| | |||||||||||||||||||||||||||||||||||||||  |||||||||  ||||||||||||||||| || | |   || ||    
T  11509969 aaataggggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaataaaggtcacgcaagtgaaaaaatgtggtcacacaaatcgcatattt 11509870  T
Q  304 ggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatcttta 369  Q
    ||||   |||||||||  |||||| |||||| || ||||||||||||| ||||||| |||||||||    
T  11509869 ggttatttgaaatttttaagagtggtacaaaggggtgtacacattaagtgtgtctatcaatcttta 11509804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 19624459 - 19624257
Alignment:
Q  118 ttaaccaaatatatgatatg-tgtgaccacatttttt-agttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtca 215  Q
    ||||||||||||||| |||| || ||||||||||||| ||||| |||||||  || |||||||||||||| |||||||||||||| ||||||||||||||    
T  19624459 ttaaccaaatatatggtatgatgcgaccacatttttttagttgtgtgaccacaatttttccagaatttatgtggttaactaagtggaaaaatagtggtca 19624360  T
Q  216 cactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaa 315  Q
    |   ||||||||||| ||| |||||| ||| ||||| |||||| ||||||| || ||||| |||| || ||||  |||| || || ||| || |||||||    
T  19624359 cgtgcattttagttgggtggccacatattttagcttataaata-tggtcacacaactgaagaaatatgatcacttagactatatatttgattaactgaaa 19624261  T
Q  316 tttt 319  Q
    ||||    
T  19624260 tttt 19624257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 107 - 297
Target Start/End: Complemental strand, 27707837 - 27707647
Alignment:
Q  107 aaaaatttcagttaaccaaatatatgatatgtgtgaccacat-tttttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaa 205  Q
    |||||||| |||||| |||||||||| | | |||||||| || ||||| ||||| || ||| ||| ||||||||||||||||||||||  ||||||||||    
T  27707837 aaaaatttaagttaatcaaatatatggtctctgtgaccatatatttttggttgcatgtccactatttttccagaatttatttggttaatcaagtgaaaaa 27707738  T
Q  206 atagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccat 297  Q
    ||||||||||  | ||||||||||| | |||||||||||| || ||| |||| |||||||| ||  ||||||||||||| ||| || |||||    
T  27707737 atagtggtcatgcacattttagttgtgcgaccacattttttagtttcaaaat-gtggtcacacaattgaaaaaatgtgggcacacaaaccat 27707647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 148 - 269
Target Start/End: Complemental strand, 42481422 - 42481301
Alignment:
Q  148 ttttttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttca 247  Q
    |||||||||| | |||||||||| ||| ||||||||||||||||||||||||  ||||||| |||||||   ||||||||||| ||||||| ||||||||    
T  42481422 ttttttagttacatgaccattattttttcagaatttatttggttaactaagtagaaaaataatggtcacgtacattttagttgtgtgaccatatttttca 42481323  T
Q  248 gcttctaaatagtggtcacgca 269  Q
    | || |||||||||||||||||    
T  42481322 gtttttaaatagtggtcacgca 42481301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 257
Target Start/End: Original strand, 27335307 - 27335479
Alignment:
Q  75 ctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtt 173  Q
    ||||||||| |||| || ||| ||||| | | |||| ||| ||||||||||  ||||| |||||||||||||||||||| ||||||||||| | |||       
T  27335307 ctttaatgtgtacacccctttgtaccattctgaaaattttgagttaaccaataatatggtatgtgtgaccacatttttttagttgcgtgacaactat--- 27335403  T
Q  174 tccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaat 257  Q
            ||||||||||||||||||| |||||||||||||||    |||||||||| ||||||||||||||||||||||||||    
T  27335404 --------ttatttggttaactaagtggaaaaatagtggtcacgtgtattttagttgtgtgaccacatttttcagcttctaaat 27335479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 107 - 245
Target Start/End: Complemental strand, 39126329 - 39126189
Alignment:
Q  107 aaaaatttcagttaaccaaatatatgatatgtgtgaccaca-ttttttagttgcgtgaccatta--tgtttccagaatttatttggttaactaagtgaaa 203  Q
    |||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||| | ||  | |||  | |||||||||||||||||||||| ||    
T  39126329 aaaaatttaagttaaccaaatatatgatctgtgtgacaacatttttttagttgcgtgactactatttttttttaaaatttatttggttaactaagtggaa 39126230  T
Q  204 aaatagtggtcacactcattttagttgcgtgaccacattttt 245  Q
    |||||||| || | | | |||||||||||| |||||||||||    
T  39126229 aaatagtgatcgcgcgc-ttttagttgcgtaaccacattttt 39126189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 107 - 215
Target Start/End: Complemental strand, 11510100 - 11509989
Alignment:
Q  107 aaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt---agttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaa 203  Q
    |||||||||||||||  |||||||| ||||||||||||| |||||||   |||||||||| || ||| || | ||||||||||| ||||||||| |||||    
T  11510100 aaaaatttcagttaaataaatatataatatgtgtgaccatatttttttttagttgcgtgagcactattttcctagaatttatttagttaactaattgaaa 11510001  T
Q  204 aaatagtggtca 215  Q
    ||||||||||||    
T  11510000 aaatagtggtca 11509989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 164
Target Start/End: Complemental strand, 18733677 - 18733581
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgac 164  Q
    |||||||||||||||| |||| || ||||||||| | | |||||||| ||||||| ||||||||| |||| |||||||||||| |||||||||||||    
T  18733677 tagacacctttaatgtgtacacccctttataccattctgaaaaatttaagttaactaaatatatggtatgggtgaccacatttcttagttgcgtgac 18733581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 246
Target Start/End: Original strand, 34627245 - 34627384
Alignment:
Q  108 aaaatttcagttaaccaaatatatgatatgtgtgaccacatttttta-gttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaa 206  Q
    ||||||| |||||| |||||||||  | | |||||||| |||||||| |||||||||| | ||| |||   |||||||||||||||||||| || |||||    
T  34627245 aaaatttaagttaatcaaatatatagtttctgtgaccatattttttaagttgcgtgactactatttttttcgaatttatttggttaactaaatggaaaaa 34627344  T
Q  207 tagtggtcacactcattttagttgcgtgaccacatttttc 246  Q
    || |||| |||   ||||||||||||||||||||||||||    
T  34627345 taatggttacatgtattttagttgcgtgaccacatttttc 34627384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 27365008 - 27365085
Alignment:
Q  180 atttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaat 257  Q
    |||||||||||||| |||||| |||||||||||||||||  ||||||| |||||||| ||||||||||| ||||||||    
T  27365008 atttatttggttaattaagtggaaaaatagtggtcacacgtattttagctgcgtgactacatttttcagtttctaaat 27365085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 1705863 - 1705769
Alignment:
Q  71 acacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgacca 166  Q
    ||||| ||||||| ||||||||| | || || | |||||||||||||||||||||||| ||||||||||||| || | ||||||||||||||||||    
T  1705863 acacccttaatgtgtacatccttgtgtatcattgtaaaaaatttcagttaaccaaatacatgatatgtgtgatcata-tttttagttgcgtgacca 1705769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 179 - 258
Target Start/End: Original strand, 13358110 - 13358189
Alignment:
Q  179 aatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaata 258  Q
    |||||||||||||||||| ||| |||||||||||| || | ||||||| ||| ||||||| |||||||||||||||||||    
T  13358110 aatttatttggttaactatgtggaaaaatagtggtaacgcgcattttaattgtgtgaccatatttttcagcttctaaata 13358189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 3823562 - 3823661
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgacca 166  Q
    |||||||| ||||||| |||| || ||| ||||||| |  |||||||||||||||||| |||||| | ||||||||||||||||||  ||||||||||||    
T  3823562 tagacacccttaatgtgtacacccctttgtaccactctcgaaaatttcagttaaccaattatatggtctgtgtgaccacattttttctgttgcgtgacca 3823661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 257 - 372
Target Start/End: Original strand, 27040683 - 27040798
Alignment:
Q  257 tagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgt 356  Q
    ||||||||||||| |||||||| |||| |||| |||| ||| || |||||| || ||||||||| |||||  |||||| | ||||||||||| || ||||    
T  27040683 tagtggtcacgcaactgaaaaattgtgatcacacagatcatatatttggttaaccgaaattttctagagtagtacaaaggaatgtacacattgagagtgt 27040782  T
Q  357 ctaccaatctttattc 372  Q
    | ||| ||||||||||    
T  27040783 caacctatctttattc 27040798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 27326047 - 27326124
Alignment:
Q  180 atttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaat 257  Q
    |||||||| |||||| || || ||||||||||||||||   ||||||||||||||||||||||||| || ||||||||    
T  27326047 atttatttagttaaccaactggaaaaatagtggtcacatgtattttagttgcgtgaccacattttttagtttctaaat 27326124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 27332284 - 27332361
Alignment:
Q  180 atttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaat 257  Q
    |||||||| |||||| || || ||||||||||||||||   ||||||||||||||||||||||||| || ||||||||    
T  27332284 atttatttagttaaccaactggaaaaatagtggtcacatgtattttagttgcgtgaccacattttttagtttctaaat 27332361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 257 - 361
Target Start/End: Original strand, 19280298 - 19280402
Alignment:
Q  257 tagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgt 356  Q
    |||||||||| |  || ||||||||| ||||| |||||||| || ||| || ||| ||| ||| ||||||| |||||| || ||||||||||||||||||    
T  19280298 tagtggtcacaccacttaaaaaatgttgtcacacagaccatatatttgattaactaaaaattttcagagtggtacaaacgggtgtacacattaagggtgt 19280397  T
Q  357 ctacc 361  Q
    |||||    
T  19280398 ctacc 19280402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 350
Target Start/End: Original strand, 31545714 - 31545810
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaa 350  Q
    ||||||||||||| || || |||||||||||||||  ||||||| || | ||||  |||||||||| ||||||||||||||  |||||||| |||||    
T  31545714 aaatagtggtcacacaactaaaaaaatgtggtcacatagaccatatattaggttacctgaaatttttcagagtgatacaaaaagatgtacatattaa 31545810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 3785867 - 3785958
Alignment:
Q  62 gattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt 153  Q
    ||||| |||||||| ||||||| |||| || ||| ||||||| |  |||||||||||||||||| | |||| | ||||||||||||||||||    
T  3785867 gattggtagacacccttaatgtgtacacccctttgtaccactctcgaaaatttcagttaaccaattttatggtctgtgtgaccacatttttt 3785958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 357
Target Start/End: Original strand, 22432428 - 22432531
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    |||||||||||| ||| || ||||||||| ||||| |||||||| || ||| || ||| ||||||| || |||| |||||| || ||||||||||||| |    
T  22432428 aaatagtggtcatgcaactaaaaaaatgtagtcacacagaccatatatttgatttactcaaatttttcaaagtgctacaaaagggtgtacacattaagag 22432527  T
Q  354 tgtc 357  Q
    ||||    
T  22432528 tgtc 22432531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 372
Target Start/End: Complemental strand, 31545487 - 31545424
Alignment:
Q  309 actgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    |||||||||||| |||||  |||||| |||| |||||||||| |||||||||||||||||||||    
T  31545487 actgaaattttcgagagtagtacaaagggatatacacattaaaggtgtctaccaatctttattc 31545424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 195 - 334
Target Start/End: Complemental strand, 23163404 - 23163264
Alignment:
Q  195 taagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctg--aaaaaatgtggtcacgcag 292  Q
    |||||||||||||| || ||||   ||||||||||| ||||||| |||||||||| |||| |||||||||| ||| |||  ||||||||| |||||  ||    
T  23163404 taagtgaaaaaataatgatcacgtgcattttagttgtgtgaccatatttttcagc-tctacatagtggtcatgcaactgataaaaaatgtagtcacatag 23163306  T
Q  293 accatgtacttggttgactgaaattttccagagtgatacaaa 334  Q
    ||||| || | | || ||||| |||||| |||||| ||||||    
T  23163305 accatatattagattaactgatattttcgagagtggtacaaa 23163264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 179 - 320
Target Start/End: Original strand, 27079314 - 27079454
Alignment:
Q  179 aatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagctt--ctaaatagtggtcacgcagctgaaa 276  Q
    |||||||||| ||||||||||| ||||||  ||||||| | |||||||| | |||||||||||||||    ||    |||| ||||||| ||| ||||||    
T  27079314 aatttatttgattaactaagtggaaaaatgatggtcacgcgcattttagctacgtgaccacattttt---tttgaaaaaattgtggtcatgcaactgaaa 27079410  T
Q  277 aaatgtggtcacgcagaccatgtacttggttgactgaaattttc 320  Q
    || ||||||||| |||||||| || |||||| || |||||||||    
T  27079411 aattgtggtcacacagaccatatatttggttaaccgaaattttc 27079454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 179 - 320
Target Start/End: Original strand, 27085111 - 27085251
Alignment:
Q  179 aatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagctt--ctaaatagtggtcacgcagctgaaa 276  Q
    |||||||||| ||||||||||| ||||||  ||||||| | |||||||| | |||||||||||||||    ||    |||| ||||||| ||| ||||||    
T  27085111 aatttatttgattaactaagtggaaaaatgatggtcacgcgcattttagctacgtgaccacattttt---tttgaaaaaattgtggtcatgcaactgaaa 27085207  T
Q  277 aaatgtggtcacgcagaccatgtacttggttgactgaaattttc 320  Q
    || ||||||||| |||||||| || |||||| || |||||||||    
T  27085208 aattgtggtcacacagaccatatatttggttaaccgaaattttc 27085251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 170
Target Start/End: Original strand, 11509808 - 11509917
Alignment:
Q  62 gattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcg 160  Q
    ||||| |||||||  ||||||| |||| || ||| ||||||| | ||||||||||  |||||||||||  ||| |||||||||||||||||| | |||||    
T  11509808 gattgatagacacacttaatgtgtacacccctttgtaccactcttaaaaatttcaaataaccaaatatgcgatttgtgtgaccacattttttcacttgcg 11509907  T
Q  161 tgaccattat 170  Q
    ||||| ||||    
T  11509908 tgacctttat 11509917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 166
Target Start/End: Complemental strand, 27040774 - 27040686
Alignment:
Q  79 aatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccac-attttttagttgcgtgacca 166  Q
    ||||| ||||| | ||| ||| ||| || |||||||| |||||||||||||||||| ||||||| ||| |||||| |||||||||||||    
T  27040774 aatgtgtacattcctttgtactactctagaaaatttcggttaaccaaatatatgatctgtgtgatcacaatttttcagttgcgtgacca 27040686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 316
Target Start/End: Complemental strand, 41571881 - 41571797
Alignment:
Q  232 gtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaat 316  Q
    |||| ||||||||||| ||| ||||||||||||||| | ||||||||||||||| ||  | ||||| || ||| |||||||||||    
T  41571881 gtgatcacatttttcaacttttaaatagtggtcacgtaactgaaaaaatgtggttacatataccatatatttgattgactgaaat 41571797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 44080196 - 44080267
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt--agttgcgtgacca 166  Q
    ||||||| | || |||||||||||||||||||||| || |||||||||| |||||||  |||||||||||||    
T  44080196 taccactctgaacaatttcagttaaccaaatatataatctgtgtgaccatattttttgcagttgcgtgacca 44080267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 361
Target Start/End: Original strand, 3823750 - 3823856
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    |||||||||||||||| || |||||| |||||||| ||||| || || |||||| |||| |||||| | ||||  |||||| || || ||| ||||||||    
T  3823750 aaatagtggtcacgcaact-aaaaaacgtggtcacacagacaatatatttggttaactggaatttttctgagtagtacaaacgggtgaacatattaaggg 3823848  T
Q  354 tgtctacc 361  Q
    ||||||||    
T  3823849 tgtctacc 3823856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 42638114 - 42638055
Alignment:
Q  108 aaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgacca 166  Q
    ||||||||||||||| ||||||||| ||| | |||||||||||||| |||||||||||||    
T  42638114 aaaatttcagttaactaaatatatggtatatatgaccacattttttcagttgcgtgacca 42638055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 23163837 - 23163787
Alignment:
Q  189 gttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccac 239  Q
    |||||||||||||| |||||||||||||   ||||||||||||||||||||    
T  23163837 gttaactaagtgaagaaatagtggtcacgtacattttagttgcgtgaccac 23163787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 27079460 - 27079394
Alignment:
Q  101 actttaaaaaatttcagttaaccaaatatatgatatgtgtgaccac-attttttagttgcgtgacca 166  Q
    |||||| |||||||| |||||||||||||||| | ||||||||||| |||||| |||||| ||||||    
T  27079460 actttagaaaatttcggttaaccaaatatatggtctgtgtgaccacaatttttcagttgcatgacca 27079394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 27085257 - 27085191
Alignment:
Q  101 actttaaaaaatttcagttaaccaaatatatgatatgtgtgaccac-attttttagttgcgtgacca 166  Q
    |||||| |||||||| |||||||||||||||| | ||||||||||| |||||| |||||| ||||||    
T  27085257 actttagaaaatttcggttaaccaaatatatggtctgtgtgaccacaatttttcagttgcatgacca 27085191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 371
Target Start/End: Complemental strand, 27335406 - 27335288
Alignment:
Q  253 taaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagg 352  Q
    |||||||| |||||||| || ||||||||||||||| || ||||| |  |||||| ||| ||| ||| |||| || |||||| || |||||||||||| |    
T  27335406 taaatagttgtcacgcaactaaaaaaatgtggtcacacataccatattattggttaactcaaaattttcagaatggtacaaaggggtgtacacattaaag 27335307  T
Q  353 gtgtctaccaatctttatt 371  Q
     ||| |||| ||| |||||    
T  27335306 atgtttacctatcattatt 27335288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 166
Target Start/End: Complemental strand, 33488449 - 33488340
Alignment:
Q  58 caatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacat-tttttagt 156  Q
    ||||||| | |||||||||||||||| || |  | ||||||  ||| | |||||||| ||||||| ||||||||| ||||| ||||| ||| ||||||||    
T  33488449 caatgatagttagacacctttaatgtgtatactcatttatataactctgaaaaatttaagttaactaaatatatggtatgtatgaccgcatatttttagt 33488350  T
Q  157 tgcgtgacca 166  Q
    |||| |||||    
T  33488349 tgcgcgacca 33488340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 19280111 - 19280208
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgacca 166  Q
    |||||||| |||| || |||| || ||| |||||||  |||| |||| ||||||||||||||||| | || ||||||||||||||| || ||||||||||    
T  19280111 tagacacccttaaagtgtacacccctttgtaccact--aaaatattttagttaaccaaatatatggtctgagtgaccacattttttcagatgcgtgacca 19280208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 5341994 - 5342081
Alignment:
Q  274 aaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctacc 361  Q
    ||||||||||||||| |||||||| || | | || ||||||||||| ||||||  |||||| || ||||| ||||| || ||||||||    
T  5341994 aaaaaatgtggtcacacagaccatatattcgattaactgaaatttttcagagtcgtacaaaggggtgtacgcattagggatgtctacc 5342081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 360
Target Start/End: Original strand, 18733572 - 18733678
Alignment:
Q  253 taaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagg 352  Q
    |||||||| |||||||| || || |||||||||||| || ||||| || || ||| ||| ||||||| |||| || || ||| || |||||||||||| |    
T  18733572 taaatagttgtcacgcaact-aagaaatgtggtcacccataccatatatttagttaacttaaatttttcagaatggtataaaggggtgtacacattaaag 18733670  T
Q  353 gtgtctac 360  Q
    ||||||||    
T  18733671 gtgtctac 18733678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 9710922 - 9710852
Alignment:
Q  62 gattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatg 132  Q
    ||||| |||| ||| ||||| | |||| || ||| ||||||| | ||||||||||||||||||||||||||    
T  9710922 gattggtagaaacccttaatatgtacacccctttgtaccactctgaaaaatttcagttaaccaaatatatg 9710852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 11501248 - 11501310
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgc 159  Q
    ||||||| | |||| |||||  |||||||||||||| | ||||||||||||||||| ||||||    
T  11501248 taccactctgaaaattttcaaataaccaaatatatggtctgtgtgaccacatttttcagttgc 11501310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 361
Target Start/End: Original strand, 3786060 - 3786164
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    |||||||||||||||| || |||||| |||||||| ||||| || || |||||| |||| |||||| | ||||| |  ||| || || ||| ||||||||    
T  3786060 aaatagtggtcacgcaact-aaaaaacgtggtcacacagacaatatatttggttaactggaatttttctgagtggt--aaacgggtgaacatattaaggg 3786156  T
Q  354 tgtctacc 361  Q
    ||||||||    
T  3786157 tgtctacc 3786164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 27326278 - 27326158
Alignment:
Q  59 aatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agtt 157  Q
    |||||||| || ||||  ||||||| |||| || ||| ||||| ||||  ||| |||| |||| |||||||||| | ||| ||||||||||||||  |||    
T  27326278 aatgattggtaaacactcttaatgtgtacacccctttctaccattttaggaaacttcaattaatcaaatatatggtttgtctgaccacattttttcggtt 27326179  T
Q  158 gcgtgaccattatgtttccag 178  Q
    |||||| || ||| |||||||    
T  27326178 gcgtgatcactatttttccag 27326158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 27332515 - 27332395
Alignment:
Q  59 aatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agtt 157  Q
    |||||||| || ||||  ||||||| |||| || ||| ||||| ||||  ||| |||| |||| |||||||||| | ||| ||||||||||||||  |||    
T  27332515 aatgattggtaaacactcttaatgtgtacacccctttctaccattttaggaaacttcaattaatcaaatatatggtttgtctgaccacattttttcggtt 27332416  T
Q  158 gcgtgaccattatgtttccag 178  Q
    |||||| || ||| |||||||    
T  27332415 gcgtgatcactatttttccag 27332395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 27707610 - 27707670
Alignment:
Q  93 tttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt 153  Q
    |||||| || ||||||||| |||| |||| |||||||||| | |||||| |||||||||||    
T  27707610 tttatatcattttaaaaaaattcaattaatcaaatatatggtttgtgtgcccacatttttt 27707670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 55165143 - 55165099
Alignment:
Q  172 tttccagaatttatttggttaactaagtgaaaaaatagtggtcac 216  Q
    |||||||||||||||||  |||||||||| ||||||||| |||||    
T  55165143 tttccagaatttatttgaataactaagtggaaaaatagtagtcac 55165099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 150; Significance: 4e-79; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 58 - 374
Target Start/End: Original strand, 30905947 - 30906264
Alignment:
Q  58 caatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattt-tttagt 156  Q
    ||||||| | |||||||  ||||||| ||||||| ||| || || | | |||| ||| ||||||||| ||||||  | ||||||||||||||| ||||||    
T  30905947 caatgataggtagacactcttaatgtgtacatccctttgtaacattctgaaaatttttagttaaccagatatattgtctgtgtgaccacatttatttagt 30906046  T
Q  157 tgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaa 256  Q
    || ||||||| |||||||||| |||||||||| ||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||| | ||||    
T  30906047 tgtgtgaccactatgtttccataatttatttgcttaactaagtggaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcatttaaa 30906146  T
Q  257 tagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgt 356  Q
    ||||||||||| | ||||||||  ||||||||||||||||| || |||||| ||||||||||| ||||||| |||||| || |||||||||||| |||||    
T  30906147 tagtggtcacgaaactgaaaaatggtggtcacgcagaccatatatttggttaactgaaatttttcagagtggtacaaaagggtgtacacattaaaggtgt 30906246  T
Q  357 ctaccaatctttattcat 374  Q
     |||| ||||||||||||    
T  30906247 gtacccatctttattcat 30906264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 68 - 288
Target Start/End: Original strand, 1400680 - 1400900
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttta-gttgcgtgacca 166  Q
    |||||||| ||||||| |||| |||||| ||||| | | |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  1400680 tagacacccttaatgtgtacacccttttgtaccaatctgaaaaatttcagttaaccaaatatatggtatgtgtgaccacattttttaagttgcgtgacca 1400779  T
Q  167 ttatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcac 266  Q
     ||| |||||| |||||||||||||||||||||| |||||||||| |||| | |||||| |||| |||||||||||||||||||||||||||||||||||    
T  1400780 ctatttttccataatttatttggttaactaagtggaaaaatagtgatcacgcgcatttttgttgtgtgaccacatttttcagcttctaaatagtggtcac 1400879  T
Q  267 gcagctgaaaaaatgtggtcac 288  Q
    ||| ||| ||||||||||||||    
T  1400880 gcaactg-aaaaatgtggtcac 1400900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 114 - 372
Target Start/End: Complemental strand, 43900685 - 43900426
Alignment:
Q  114 tcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtgg 212  Q
    ||||||||||||||||||||| ||||||| |||||||||| | ||||||||||  ||| ||| |||||||||||||||||||||| |  |||||||||||    
T  43900685 tcagttaaccaaatatatgatttgtgtgatcacatttttttaattgcgtgacccctattttttcagaatttatttggttaactaaatagaaaaatagtgg 43900586  T
Q  213 tcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactg 312  Q
    ||||   ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||| |||||||| || || |||  |||    
T  43900585 tcacgtgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacacaactgaaaaaatgtgatcacacagaccatatatttagttacctg 43900486  T
Q  313 aaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    |||||||| |||||| ||||||  ||| ||||||||||  ||||||| ||||||||||||    
T  43900485 aaattttcgagagtggtacaaaatgatctacacattaaaagtgtctatcaatctttattc 43900426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 58 - 284
Target Start/End: Original strand, 28527220 - 28527445
Alignment:
Q  58 caatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttt-ttagt 156  Q
    ||||||| | |||||||| ||||| | |||| || ||| ||||||||| ||||||||||| |||||||||||||| | |||||||||||||||| |||||    
T  28527220 caatgataggtagacacccttaat-tgtacacccctttgtaccactttgaaaaatttcagctaaccaaatatatggtctgtgtgaccacatttttttagt 28527318  T
Q  157 tgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaa 256  Q
    |||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||| |||||| ||||||| |||||||||||    
T  28527319 tgcgtgaccactatttttccagaatttatttggttaactaattggaaaaatagtggtcacacgcatgttagtt-cgtgacaacattttccagcttctaaa 28527417  T
Q  257 tagtggtcacgcagctgaaaaaatgtgg 284  Q
    |  |||||||||| || |||||||||||    
T  28527418 ttatggtcacgcaactaaaaaaatgtgg 28527445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 105 - 374
Target Start/End: Complemental strand, 45306131 - 45305863
Alignment:
Q  105 taaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaa 203  Q
    |||||||||| ||| || ||||||||||||||||||||||||||||||| ||||  |||| || ||| |||  |||||||||| ||||||||||||| ||    
T  45306131 taaaaaatttaagt-aatcaaatatatgatatgtgtgaccacatttttttagttatgtgatcaatatttttttagaatttattcggttaactaagtggaa 45306033  T
Q  204 aaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtactt 303  Q
    ||||||||||||| | ||||||||||||||| |||||||||||||||| ||||| ||||||||||| |||||||||| ||||||  ||||| || || ||    
T  45306032 aaatagtggtcacgcacattttagttgcgtggccacatttttcagcttttaaat-gtggtcacgcaactgaaaaaatatggtcatacagactatatattt 45305934  T
Q  304 ggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattcat 374  Q
    | || |||||||||||  |||||| |||||| |  |||||| |||||||||||  | | ||||||||||||    
T  45305933 gattaactgaaattttttagagtggtacaaaggagtgtacatattaagggtgtaaatctatctttattcat 45305863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 70 - 257
Target Start/End: Complemental strand, 33667516 - 33667328
Alignment:
Q  70 gacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttta-gttgcgtgaccatt 168  Q
    |||||| ||||| | ||||  ||||| ||||||| | |||||||| ||||||||||||||||| ||||| ||| ||||||||||| |||||||||||| |    
T  33667516 gacacccttaatatgtacactcttttgtaccactctgaaaaattttagttaaccaaatatatggtatgtatgaacacattttttaagttgcgtgaccact 33667417  T
Q  169 atgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaat 257  Q
    || ||| |||||| |||||||||||||||||| |||||||||||| || | ||||||| |||||||||||||||||||| |||||||||    
T  33667416 attttttcagaatatatttggttaactaagtggaaaaatagtggttacgcacattttaattgcgtgaccacatttttcaacttctaaat 33667328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 357
Target Start/End: Original strand, 7378457 - 7378663
Alignment:
Q  148 ttttttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttca 247  Q
    ||||||||||||||||| | ||| |||  | |||||| | |||||| |||||| || |||||||||||||| |||||||||||||| |||| |||||| |    
T  7378457 ttttttagttgcgtgactactatttttttaaaatttaat-ggttaattaagtggaataatagtggtcacacacattttagttgcgtcaccatattttt-a 7378554  T
Q  248 gcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacat 347  Q
    |||||||||| ||||| ||||| |||||||||| ||||||| || ||||| || || ||| ||||||||||| | || || | |||| ||||| || |||    
T  7378555 gcttctaaat-gtggttacgcaactgaaaaaatatggtcacacaaaccatatattttgttaactgaaatttttctgaatggtgcaaaaggatggacgcat 7378653  T
Q  348 taagggtgtc 357  Q
    ||| ||||||    
T  7378654 taaaggtgtc 7378663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 1400785 - 1400678
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    |||||||||||||||| || ||||||||||||||| || ||||| || |||||| ||||||||||| |||| || |||||| || |||||||||||||||    
T  1400785 aaatagtggtcacgcaacttaaaaaatgtggtcacacataccatatatttggttaactgaaatttttcagattggtacaaaagggtgtacacattaaggg 1400686  T
Q  354 tgtctacc 361  Q
    ||||||||    
T  1400685 tgtctacc 1400678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 28527334 - 28527228
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    |||||||||||||||| || ||||||||||||||| |||||||| || ||||||  |||||||||| || |||| |||||| || |||||| ||||||||    
T  28527334 aaatagtggtcacgcaactaaaaaaatgtggtcacacagaccatatatttggttagctgaaatttttcaaagtggtacaaaggggtgtaca-attaaggg 28527236  T
Q  354 tgtctacc 361  Q
    ||||||||    
T  28527235 tgtctacc 28527228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 30906246 - 30906150
Alignment:
Q  71 acacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgacca-cattttttagttgcgtgacca 166  Q
    ||||||||||||| |||| |||||| ||||||| | |||||||||||||||||||||||||| | || ||||||| ||||||| |||| ||||||||    
T  30906246 acacctttaatgtgtacacccttttgtaccactctgaaaaatttcagttaaccaaatatatggtctgcgtgaccaccatttttcagtttcgtgacca 30906150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 70 - 234
Target Start/End: Complemental strand, 34175309 - 34175155
Alignment:
Q  70 gacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatt-ttttagttgcgtgaccatt 168  Q
    |||||| ||||||| |||| || ||| ||||| | |||||||||| |||||| ||||||||| || |||||||| ||||| |||||||||||||| || |    
T  34175309 gacaccattaatgtgtacacccatttgtaccattctaaaaaatttaagttaatcaaatatataatttgtgtgacaacattgttttagttgcgtgatcact 34175210  T
Q  169 atgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtg 234  Q
    ||           ||||||||||||||||||| ||||||||  ||||||| |||||||||||||||    
T  34175209 at-----------ttatttggttaactaagtggaaaaatagcagtcacacacattttagttgcgtg 34175155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 41212480 - 41212411
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgacca 166  Q
    ||||||| | |||||||| ||||||||||||||||| | ||||||||||||||||||||||| |||||||    
T  41212480 taccactctgaaaaatttaagttaaccaaatatatggtctgtgtgaccacattttttagttgtgtgacca 41212411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 33667252 - 33667331
Alignment:
Q  71 acacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattt 150  Q
    ||||| ||||||||||||||| |||| |||||| ||||||| |||| ||||||||||||||| | ||| |||||||||||    
T  33667252 acacccttaatgtctacatccctttacaccactctaaaaaaattcaattaaccaaatatatggtttgtatgaccacattt 33667331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 357
Target Start/End: Original strand, 33667413 - 33667516
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    |||||||||||||||| || |||||||||| |||  || ||||| || |||||| ||| ||||||| ||||||| |||||| |  |||||| ||||||||    
T  33667413 aaatagtggtcacgcaacttaaaaaatgtgttcatacataccatatatttggttaactaaaatttttcagagtggtacaaaagagtgtacatattaaggg 33667512  T
Q  354 tgtc 357  Q
    ||||    
T  33667513 tgtc 33667516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 41212424 - 41212507
Alignment:
Q  274 aaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtc 357  Q
    ||||||||||||||| |||||||| || |||||| ||| ||||||| ||||||| |||||| || | |||| ||||||||||||    
T  41212424 aaaaaatgtggtcacacagaccatatatttggttaacttaaatttttcagagtggtacaaaggggtatacatattaagggtgtc 41212507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 30906060 - 30905955
Alignment:
Q  256 atagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtg 355  Q
    ||||||||||| || || || |||||||||||| ||||| || ||  ||||| ||| ||| ||| |||| || |||||| |||||||||||||||| |||    
T  30906060 atagtggtcacacaactaaataaatgtggtcacacagacaatatatctggttaactaaaaattttcagaatgttacaaagggatgtacacattaagagtg 30905961  T
Q  356 tctacc 361  Q
    ||||||    
T  30905960 tctacc 30905955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 45305907 - 45305977
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgacca 166  Q
    ||||||| ||||||||||||||||| |||||||||  | ||| |||||| ||||||| |||||||||||||    
T  45305907 taccactctaaaaaatttcagttaatcaaatatatagtctgtatgaccatattttttcagttgcgtgacca 45305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 7378663 - 7378566
Alignment:
Q  70 gacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgacca 166  Q
    |||||||||||||  | |||||||||  |||| |   |||||||||||||||| ||||||||| | |||||||||| ||||||| |||||||| ||||    
T  7378663 gacacctttaatgcgtccatccttttgcaccattcagaaaaatttcagttaacaaaatatatggtttgtgtgaccatattttttcagttgcgtaacca 7378566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 1400906 - 1400873
Alignment:
Q  133 atatgtgtgaccacattttttagttgcgtgacca 166  Q
    |||||||||||||||||||| |||||||||||||    
T  1400906 atatgtgtgaccacatttttcagttgcgtgacca 1400873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 2e-74; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 97 - 326
Target Start/End: Original strand, 10304636 - 10304865
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgaccattatgtttccagaatttatttggttaacta 196  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||| |||||| ||||||||||| | | |||||||||||||||||||||||||    
T  10304636 taccactctaaaaaatttcagttaaccaaatatatggtctgtgtgaccacactttttaattgcgtgaccactttttttccagaatttatttggttaacta 10304735  T
Q  197 agtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagacca 296  Q
    |||||||||||||||||||| | ||||||||||||||||||  ||||||| |||||||||||||| ||||||| |||||||||||||||||| |||||||    
T  10304736 agtgaaaaaatagtggtcacgcgcattttagttgcgtgaccgtatttttctgcttctaaatagtgatcacgcaactgaaaaaatgtggtcacacagacca 10304835  T
Q  297 tgtacttggttgactgaaattttccagagt 326  Q
    | || || ||| ||| |||||||| |||||    
T  10304836 tatatttagttcactaaaattttcgagagt 10304865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 79 - 370
Target Start/End: Complemental strand, 3222624 - 3222332
Alignment:
Q  79 aatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttt-tagttgcgtgaccattatgttt-cc 176  Q
    ||||| ||||| | ||| || |||| |||||||  | |||||| |||||||||| | ||||||||||||||||| ||||| |||||||| ||| ||| ||    
T  3222624 aatgtgtacattcgtttgtatcactctaaaaaagattagttaatcaaatatatggtctgtgtgaccacatttttctagttacgtgaccactatattttcc 3222525  T
Q  177 agaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaa 276  Q
    |||||||||||||||||||||||| |||||||||||||||   |||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||    
T  3222524 agaatttatttggttaactaagtggaaaaatagtggtcacgtacattttagttgcgtgaccgcatttttcagcatttaaatagtggtcacgcaactgaaa 3222425  T
Q  277 aaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttat 370  Q
    ||||||||||||  | ||||| || ||||||   |||||||||  ||||| ||||||| || ||||||||||||||||||||| ||||||||||    
T  3222424 aaatgtggtcacagacaccatatatttggttatttgaaatttttaagagtaatacaaa-gggtgtacacattaagggtgtctatcaatctttat 3222332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 68 - 372
Target Start/End: Complemental strand, 22608566 - 22608259
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatat---atgatatgtgtgaccacatt-ttttagttgcgtga 163  Q
    ||||||| |||||| | |||| || ||| || || ||| |||| ||||||||||||||||||   ||||| |||||||||| ||| ||||||||||||||    
T  22608566 tagacacttttaatatgtacacccctttgtatcattttgaaaattttcagttaaccaaatattatatgatctgtgtgaccatattgttttagttgcgtga 22608467  T
Q  164 ccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggt 263  Q
    ||| ||  ||| ||||| ||||||| |||||||| | |||||||||||||||  | |||||||||||| |||||||||||||||||||||||||||||||    
T  22608466 ccactaatttttcagaaattatttgattaactaattcaaaaaatagtggtcatgcacattttagttgcatgaccacatttttcagcttctaaatagtggt 22608367  T
Q  264 cacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaa 363  Q
    |||||| ||| |||||||| ||||| |||||||| || |||||| ||| |||||||  |||||| |||||| || |||||||||||||| | ||||||||    
T  22608366 cacgcaactg-aaaaatgtagtcacacagaccatatatttggttaactaaaatttttgagagtggtacaaaggggtgtacacattaaggatatctaccaa 22608268  T
Q  364 tctttattc 372  Q
    | |||||||    
T  22608267 tttttattc 22608259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 93 - 266
Target Start/End: Original strand, 138646 - 138820
Alignment:
Q  93 tttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttt-ttagttgcgtgaccattatgtttccagaatttatttggtt 191  Q
    ||||||||||| ||||||| || ||||||||||||||||| | |||||| ||||||||| ||||||||||||||| ||| ||| ||||||||||||||||    
T  138646 tttataccactctaaaaaaatttagttaaccaaatatatggtctgtgtggccacattttcttagttgcgtgaccactattttttcagaatttatttggtt 138745  T
Q  192 aactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcac 266  Q
     |||||||| ||||||||||||| | | || ||||||||||||||||||||||||||||||||||||||||||||    
T  138746 gactaagtggaaaaatagtggtcgcgcacaatttagttgcgtgaccacatttttcagcttctaaatagtggtcac 138820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 93 - 266
Target Start/End: Original strand, 146667 - 146841
Alignment:
Q  93 tttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttt-ttagttgcgtgaccattatgtttccagaatttatttggtt 191  Q
    ||||||||||| ||||||| || ||||||||||||||||| | |||||| ||||||||| ||||||||||||||| ||| ||| ||||||||||||||||    
T  146667 tttataccactctaaaaaaatttagttaaccaaatatatggtctgtgtggccacattttcttagttgcgtgaccactattttttcagaatttatttggtt 146766  T
Q  192 aactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcac 266  Q
     |||||||| ||||||||||||| | | || ||||||||||||||||||||||||||||||||||||||||||||    
T  146767 gactaagtggaaaaatagtggtcgcgcacaatttagttgcgtgaccacatttttcagcttctaaatagtggtcac 146841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 108 - 294
Target Start/End: Original strand, 33814961 - 33815149
Alignment:
Q  108 aaaatttcagttaaccaaatatatgatatgtgtgaccacattt-tttagttgcgtgacca-ttatgtttccagaatttatttggttaactaagtgaaaaa 205  Q
    ||||||| |||||| |||||||||| | ||| |||||| || | |||||||||| ||||| || | ||| ||||||||||||||||||||||||| ||||    
T  33814961 aaaatttaagttaatcaaatatatggtttgtatgaccatatctgtttagttgcgcgaccactttttttttcagaatttatttggttaactaagtggaaaa 33815060  T
Q  206 atagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagac 294  Q
    || |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  33815061 atggtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcacacagac 33815149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 68 - 374
Target Start/End: Complemental strand, 23595344 - 23595050
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgaccat 167  Q
    |||||| | ||||| | |||| |||||| ||  ||| |||||||||||| ||||||||||||||  | |||||||||||||||||| ||||  ||||||     
T  23595344 tagacaaccttaatatgtacacccttttgtattactctaaaaaatttcaattaaccaaatatatagtctgtgtgaccacatttttttgttg--tgaccac 23595247  T
Q  168 tatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacg 267  Q
    ||  ||| |||||||||||| |||||||||||| ||||||||||| ||| |        ||||  |||||||||||||||||||||||||||| |||||     
T  23595246 taatttttcagaatttattttgttaactaagtggaaaaatagtggccacgc--------gttg--tgaccacatttttcagcttctaaatagttgtcaca 23595157  T
Q  268 cagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctt 367  Q
    || || ||||||| ||||||| |||||||| || || ||| ||| |||||||| ||||||||||||| || |||||||||||| ||||||| ||||||||    
T  23595156 caactaaaaaaatatggtcacacagaccatatatttagttaacttaaattttcgagagtgatacaaaagggtgtacacattaaaggtgtctcccaatctt 23595057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 77 - 265
Target Start/End: Complemental strand, 9068599 - 9068411
Alignment:
Q  77 ttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatt-ttttagttgcgtgaccattatgtttc 175  Q
    ||||||| |||| |||||| ||||||| | |||||||| |||||| |||||||||| |||||||||||||||| ||||||||||||||||| ||| ||||    
T  9068599 ttaatgtgtacacccttttgtaccactctgaaaaattttagttaatcaaatatatggtatgtgtgaccacatttttttagttgcgtgaccactatttttc 9068500  T
Q  176 cagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtca 265  Q
    ||||| |||||| ||| |||||||| |||||||||  |||| | |||||||| || |||||||||||||||||||| |||||||||||||    
T  9068499 cagaacttattt-gtttactaagtggaaaaatagtaatcacgcgcattttagatgtgtgaccacatttttcagcttttaaatagtggtca 9068411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 77 - 268
Target Start/End: Original strand, 3620675 - 3620867
Alignment:
Q  77 ttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattt-tttagttgcgtgaccattatgtttc 175  Q
    ||||||| ||||||| ||||||||||| | ||   ||| |||||| |||||||||| | |||||||| ||| || |||| ||||| ||||| ||| |||     
T  3620675 ttaatgtgtacatccatttataccactctgaatttttttagttaaacaaatatatggtttgtgtgactacaattctttacttgcgcgaccactatttttt 3620774  T
Q  176 cagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgc 268  Q
    ||||||||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||| ||||||||||||| ||||||    
T  3620775 cagaatttatttggttaactaagtgaaaaaatagtggtcacatatattttagttgtgtgatcacatttttcaacttctaaatagtgatcacgc 3620867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 68 - 216
Target Start/End: Original strand, 2430513 - 2430662
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccacttt-aaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgacca 166  Q
    |||||||| ||||||| ||||| | ||| ||||| | | ||||||||||||||||| ||||||||||| ||||||||||  |||||||||||| ||||||    
T  2430513 tagacacccttaatgtgtacattcctttgtaccattctgaaaaaatttcagttaactaaatatatgatctgtgtgaccattttttttagttgcatgacca 2430612  T
Q  167 ttatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcac 216  Q
     ||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  2430613 ctattttttcagaatttatttggttaactaagtggaaaaatagtggtcac 2430662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 58 - 258
Target Start/End: Complemental strand, 2835175 - 2834974
Alignment:
Q  58 caatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agt 156  Q
    ||||||| | |||||| | ||||||| || |||  ||| ||||||| | |||||||| |||||||||||||||  || |||||||||||||||||| |||    
T  2835175 caatgataggtagacagccttaatgtgtatatcaatttgtaccactctgaaaaatttaagttaaccaaatataccatctgtgtgaccacatttttttagt 2835076  T
Q  157 tgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaa 256  Q
    || || |||| ||| |||||| ||||||||| |||| ||||||| ||||||| ||||||| |  ||||||||||| |||||| |||||||||||| ||||    
T  2835075 tgtgtaaccactatttttccataatttatttagttagctaagtggaaaaataatggtcacgcgtattttagttgcatgaccatatttttcagcttttaaa 2834976  T
Q  257 ta 258  Q
    ||    
T  2834975 ta 2834974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 181 - 361
Target Start/End: Complemental strand, 9474718 - 9474543
Alignment:
Q  181 tttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaat 280  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||| ||||||||       |||||||| ||||||||||    
T  9474718 tttatttggttaactaagtgaaaaaatagtggtcacacgcatttta-tttcgtgaccacattttttagcttcta-------gtcacgcaactgaaaaaat 9474627  T
Q  281 gtg--gtcacgcagaccatgtacttggttgactgaaa-ttttccagagtgatacaaatggatgtacacattaagggtgtctacc 361  Q
    |||  ||||   ||| ||| || || | | ||||||| ||||| |||||| |||||| ||||||| |||||||| |||||||||    
T  9474626 gtggtgtcatatagatcatatagttagctaactgaaatttttcaagagtggtacaaaaggatgtatacattaagagtgtctacc 9474543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 30056032 - 30056152
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccaca--ttttttagttgcgtgacc 165  Q
    |||||||||||||||| |||  || ||| ||| ||| |||||||||||||||||||||||||||| | | ||||||||||  |||||| |||||||||||    
T  30056032 tagacacctttaatgtatactcccctttgtacaactctaaaaaatttcagttaaccaaatatatggtctatgtgaccacatttttttttgttgcgtgacc 30056131  T
Q  166 attatgtttccagaatttatt 186  Q
    | ||| ||| |||||||||||    
T  30056132 actattttttcagaatttatt 30056152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 232 - 372
Target Start/End: Original strand, 11108147 - 11108287
Alignment:
Q  232 gtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatac 331  Q
    |||||||||||||||||||| |  | |||||||||||| |||||||||||||||||| || | ||| || |||||| | |||| ||||  ||| | ||||    
T  11108147 gtgaccacatttttcagcttattgacagtggtcacgcaactgaaaaaatgtggtcacacaaatcatatatttggttaattgaatttttttagaataatac 11108246  T
Q  332 aaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    |||  ||| ||||||||||||||||||||  ||||||||||    
T  11108247 aaaaagatatacacattaagggtgtctactgatctttattc 11108287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 177
Target Start/End: Original strand, 7706764 - 7706881
Alignment:
Q  62 gattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt--agttgc 159  Q
    ||||| || ||||||||||||| ||||||||||| ||||| | | |||||||| ||||||   |||||||| | ||||||||||||||||||  ||||||    
T  7706764 gattgataaacacctttaatgtgtacatccttttgtaccattctgaaaaattttagttaatataatatatggtttgtgtgaccacatttttttcagttgc 7706863  T
Q  160 gtgaccattatgtttcca 177  Q
    ||||||| ||| ||||||    
T  7706864 gtgaccactatttttcca 7706881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 20084589 - 20084683
Alignment:
Q  70 gacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttta-gttgcgtga 163  Q
    |||||| ||||||| ||||||| |||||||||   | |||||||| ||||||||||||||||| ||||||||||||||| ||||| |||||||||    
T  20084589 gacacccttaatgtgtacatccctttataccatgctgaaaaatttaagttaaccaaatatatggtatgtgtgaccacatattttatgttgcgtga 20084683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 24386412 - 24386318
Alignment:
Q  70 gacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacat-tttttagttgcgtga 163  Q
    |||||| ||||||| ||||||| ||||||||||  | |||||||| ||||||||||||||||| | ||||||||||||| ||||| |||||||||    
T  24386412 gacacccttaatgtgtacatccctttataccacgctgaaaaatttaagttaaccaaatatatggtctgtgtgaccacatattttttgttgcgtga 24386318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 77 - 166
Target Start/End: Original strand, 22608281 - 22608370
Alignment:
Q  77 ttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgacca 166  Q
    ||||||| |||| || ||| ||||||| | |||||||| ||||||||||||||||| | |||||||| |||||||| |||||||||||||    
T  22608281 ttaatgtgtacacccctttgtaccactctcaaaaattttagttaaccaaatatatggtctgtgtgactacatttttcagttgcgtgacca 22608370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 350
Target Start/End: Original strand, 9068503 - 9068599
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaa 350  Q
    |||||||||||||||| || ||||||||||||||| || ||||| || ||| || ||| ||||||| ||||||| |||||| || ||||||||||||    
T  9068503 aaatagtggtcacgcaactaaaaaaatgtggtcacacataccatatatttgattaactaaaatttttcagagtggtacaaaagggtgtacacattaa 9068599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 369
Target Start/End: Original strand, 24386312 - 24386424
Alignment:
Q  257 tagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgt 356  Q
    ||||| ||||||| |  |||| |||||||||| |||||||| || |||||| ||| ||||||| ||| ||| || ||| |||||||||||||||||||||    
T  24386312 tagtgatcacgcaacaaaaaatatgtggtcacacagaccatatatttggttaacttaaatttttcagcgtggtataaagggatgtacacattaagggtgt 24386411  T
Q  357 ctaccaatcttta 369  Q
    | ||| |||||||    
T  24386412 caacctatcttta 24386424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 11108274 - 11108175
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgacca 166  Q
    |||||||| ||||||| || ||| |||| ||  | | ||||||| |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  11108274 tagacacccttaatgtgtatatctttttgtattattctaaaaaaattcaattaaccaaatatatgatttgtgtgaccacattttttcagttgcgtgacca 11108175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 7706876 - 7706758
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaa-tgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagg 352  Q
    |||||||||||||||| ||||||||| ||||||||| || ||||| || |   || ||| ||||||| |||| || |||||| ||||||||||||||| |    
T  7706876 aaatagtggtcacgcaactgaaaaaaatgtggtcacacaaaccatatattatattaactaaaatttttcagaatggtacaaaaggatgtacacattaaag 7706777  T
Q  353 gtgtctaccaatctttatt 371  Q
    |||| || |||||||||||    
T  7706776 gtgtttatcaatctttatt 7706758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 166
Target Start/End: Complemental strand, 7915787 - 7915697
Alignment:
Q  77 ttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccac-attttttagttgcgtgacca 166  Q
    ||||||| |||| ||| || ||||||| | ||||||||||||||| |||||||||  | ||||||||||| ||||||||||||||||||||    
T  7915787 ttaatgtgtacaccctcttttaccactctgaaaaatttcagttaatcaaatatatcgtctgtgtgaccacaattttttagttgcgtgacca 7915697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 11108160 - 11108074
Alignment:
Q  275 aaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctacc 361  Q
    |||||||||||||| |||||||| || |||||| | ||||||||| ||||||  ||||| || |||||||||||||| |||||||||    
T  11108160 aaaaatgtggtcacacagaccatatatttggttaattgaaatttttcagagtagtacaagtgaatgtacacattaagagtgtctacc 11108074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 7706932 - 7706864
Alignment:
Q  148 ttttttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcac 216  Q
    ||||||||||||||||| | ||| ||||||||| |||||||||||  |||||| |||||||||||||||    
T  7706932 ttttttagttgcgtgacaactatttttccagaacttatttggttacttaagtggaaaaatagtggtcac 7706864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 2365704 - 2365649
Alignment:
Q  112 tttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgacca 166  Q
    ||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||    
T  2365704 tttcagttaaccaaatatatggtatgcgtgaccacattttttcagttgcgtgacca 2365649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 361
Target Start/End: Original strand, 2835060 - 2835167
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    |||||||||| || || || ||||||||||||||| ||||   | || |||||| ||| ||||||| ||||||| ||||||| ||| ||||||||||||     
T  2835060 aaatagtggttacacaactaaaaaaatgtggtcacacagatggtatatttggttaacttaaatttttcagagtggtacaaattgatatacacattaaggc 2835159  T
Q  354 tgtctacc 361  Q
    ||||||||    
T  2835160 tgtctacc 2835167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 2430706 - 2430645
Alignment:
Q  117 gttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttcca 177  Q
    |||||||||||||||| | |||||||||||||||||| ||||||||||||| ||| ||||||    
T  2430706 gttaaccaaatatatggtttgtgtgaccacattttttcagttgcgtgaccactatttttcca 2430645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 372
Target Start/End: Complemental strand, 7915651 - 7915595
Alignment:
Q  316 ttttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    |||| |||||||||||||| || |||||||||||| |||||||||| ||||||||||    
T  7915651 tttttcagagtgatacaaaagggtgtacacattaaaggtgtctaccgatctttattc 7915595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 23595066 - 23595150
Alignment:
Q  69 agacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt 153  Q
    ||||||||||||||| |||| |||||| || |||| |  ||||||| ||||||| ||||||||| | |||||||||| |||||||    
T  23595066 agacacctttaatgtgtacacccttttgtatcactctcgaaaatttaagttaactaaatatatggtctgtgtgaccatatttttt 23595150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 315
Target Start/End: Original strand, 2365649 - 2365704
Alignment:
Q  260 tggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaa 315  Q
    |||||||||| ||||||||||||||||||||| ||||| || |||||| |||||||    
T  2365649 tggtcacgcaactgaaaaaatgtggtcacgcataccatatatttggttaactgaaa 2365704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 142
Target Start/End: Original strand, 7915608 - 7915683
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccacttt-aaaaaatttcagttaaccaaatatatgatatgtgtga 142  Q
    |||||||||||||||| |||| |||||| || |||| | |||||||||||||||| ||||||| || |||||||||    
T  7915608 tagacacctttaatgtgtacacccttttgtatcactctgaaaaaatttcagttaatcaaatatgtggtatgtgtga 7915683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 368
Target Start/End: Complemental strand, 20084689 - 20084578
Alignment:
Q  257 tagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgt 356  Q
    ||||| ||||||| |  |||| |||||||||| || ||||| || |||||| ||| ||||||| |||  || || ||| |||||||||||||||||||||    
T  20084689 tagtgatcacgcaacataaaatatgtggtcacacataccatatatttggttaacttaaatttttcagcatggtataaagggatgtacacattaagggtgt 20084590  T
Q  357 ctaccaatcttt 368  Q
    | ||| ||||||    
T  20084589 caacctatcttt 20084578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 360
Target Start/End: Original strand, 23595259 - 23595345
Alignment:
Q  274 aaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctac 360  Q
    ||||||||||||||| ||||| || || |||||| | |||||||||  ||||| ||||||| || |||||| ||||||| |||||||    
T  23595259 aaaaaatgtggtcacacagactatatatttggttaattgaaattttttagagtaatacaaaagggtgtacatattaaggttgtctac 23595345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 2430650 - 2430703
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggtt 307  Q
    |||||||||||||||| |||||||||||||||||| || ||||| || ||||||    
T  2430650 aaatagtggtcacgcaactgaaaaaatgtggtcacacaaaccatatatttggtt 2430703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 3222337 - 3222441
Alignment:
Q  62 gattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcg 160  Q
    ||||| |||||||| ||||||| |||| |||||  ||  ||| | ||||||||||  |||||||||||||| | | |||||||||||||||| |||||||    
T  3222337 gattgatagacacccttaatgtgtacaccctttg-tattactcttaaaaatttcaaataaccaaatatatggtgtctgtgaccacattttttcagttgcg 3222435  T
Q  161 tgacca 166  Q
    ||||||    
T  3222436 tgacca 3222441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 11108115 - 11108160
Alignment:
Q  107 aaaaatttcagttaaccaaatatatgatatgtgtgaccacattttt 152  Q
    |||||||||| ||||||||||||||| | |||||||||||||||||    
T  11108115 aaaaatttcaattaaccaaatatatggtctgtgtgaccacattttt 11108160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 2430618 - 2430511
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttc-cagagtgatacaaatggatgtacacattaagg 352  Q
    |||||||||||| ||| || ||||||  ||||||| |||| ||| || || ||| |||||||||||  |||| || |||||| | |||||||||||||||    
T  2430618 aaatagtggtcatgcaactaaaaaaaa-tggtcacacagatcatatatttagttaactgaaattttttcagaatggtacaaaggaatgtacacattaagg 2430520  T
Q  353 gtgtctacc 361  Q
    |||||||||    
T  2430519 gtgtctacc 2430511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 351
Target Start/End: Original strand, 7915696 - 7915788
Alignment:
Q  259 gtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaag 351  Q
    ||||||||||| || ||||| ||||||||| ||||| || || ||| || ||||||||||| ||||||| || ||  || |||||||||||||    
T  7915696 gtggtcacgcaactaaaaaattgtggtcacacagacgatatatttgattaactgaaatttttcagagtggtaaaagagggtgtacacattaag 7915788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 30056138 - 30056030
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaa-tgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagg 352  Q
    |||||||||||||||| |  |||||| |||||||||  ||||||| || |||||| |||||||||||  |||||  |||||| ||  ||| ||||||| |    
T  30056138 aaatagtggtcacgcaacaaaaaaaaatgtggtcacatagaccatatatttggttaactgaaattttttagagttgtacaaaggggagtatacattaaag 30056039  T
Q  353 gtgtctacc 361  Q
    |||||||||    
T  30056038 gtgtctacc 30056030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 138895 - 138813
Alignment:
Q  63 attgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccac 146  Q
    |||| |||||||| || |||| |||| || ||| ||| ||| ||||||| |||||||||||||||||||| | |||||||||||    
T  138895 attggtagacaccattgatgtgtacacccctttgtactactctaaaaaaattcagttaaccaaatatatg-tgtgtgtgaccac 138813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 146916 - 146834
Alignment:
Q  63 attgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccac 146  Q
    |||| |||||||| || |||| |||| || ||| ||| ||| ||||||| |||||||||||||||||||| | |||||||||||    
T  146916 attggtagacaccattgatgtgtacacccctttgtactactctaaaaaaattcagttaaccaaatatatg-tgtgtgtgaccac 146834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 9068329 - 9068395
Alignment:
Q  93 tttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgc 159  Q
    ||||||||||| |  ||||| |||||||||||| |||||| | ||| ||||||||||||| ||||||    
T  9068329 tttataccactctcgaaaatatcagttaaccaagtatatggtctgtatgaccacatttttcagttgc 9068395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 164
Target Start/End: Original strand, 9474536 - 9474645
Alignment:
Q  59 aatgattgctagacacctttaatgtctacatccttttataccact-ttaaaaaatttcagttaaccaaatatatga--tatgtgtgaccacatttttt-a 154  Q
    |||||| | |||||||  ||||||| ||||||||||| ||||||| || |||||||||||||| | || |||||||  ||| ||  |||||||||||| |    
T  9474536 aatgataggtagacactcttaatgtatacatccttttgtaccactcttgaaaaatttcagttagctaactatatgatctatatgacaccacattttttca 9474635  T
Q  155 gttgcgtgac 164  Q
    ||||||||||    
T  9474636 gttgcgtgac 9474645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 20084718 - 20084680
Alignment:
Q  178 gaatttatttggttaactaagtgaaaaaatagtggtcac 216  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  20084718 gaatttatttggttaactaagtgaaaaagtagtgatcac 20084680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 24386283 - 24386321
Alignment:
Q  178 gaatttatttggttaactaagtgaaaaaatagtggtcac 216  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  24386283 gaatttatttggttaactaagtgaaaaagtagtgatcac 24386321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 348
Target Start/End: Original strand, 3222532 - 3222624
Alignment:
Q  256 atagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacatt 348  Q
    |||||||||||| | ||  |||||||||||||| |||||||| || ||| || ||| |  ||||  ||||||||||||| | |||||||||||    
T  3222532 atagtggtcacgtaactagaaaaatgtggtcacacagaccatatatttgattaactaatcttttttagagtgatacaaacgaatgtacacatt 3222624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 7707000 - 7706936
Alignment:
Q  103 tttaaaaaatttcagttaaccaaatatatgatatgtgtgaccaca-ttttttagttgcgtgacca 166  Q
    |||||||||||||||||||| ||||||||  | ||||| || ||| ||||||||||||| |||||    
T  7707000 tttaaaaaatttcagttaactaaatatatagtctgtgtaactacatttttttagttgcgagacca 7706936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 10304692 - 10304632
Alignment:
Q  274 aaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaa 334  Q
    ||||| ||||||||| |||||||| || |||||| |||||||||||  |||||| ||||||    
T  10304692 aaaaagtgtggtcacacagaccatatatttggttaactgaaattttttagagtggtacaaa 10304632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 10304858 - 10304802
Alignment:
Q  108 aaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtga 163  Q
    ||||||| ||| ||| ||||||||| | |||||||||||||||||| ||||||||||    
T  10304858 aaaattttagtgaactaaatatatggtctgtgtgaccacattttttcagttgcgtga 10304802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1126 (Bit Score: 139; Significance: 1e-72; HSPs: 3)
Name: scaffold1126
Description:

Target: scaffold1126; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 68 - 364
Target Start/End: Original strand, 114 - 412
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccact-ttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatt-ttttagttgcgtgacc 165  Q
    |||||| ||||||||| |||||  |||| ||||||| || ||||||||||||||||||||||||||   ||||||| |||||| ||||||||||||||||    
T  114 tagacatctttaatgtgtacatttttttgtaccactcttgaaaaatttcagttaaccaaatatatggactgtgtgatcacattgttttagttgcgtgacc 213  T
Q  166 attatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtca 265  Q
    | ||  ||| || || |||||||| ||| |||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  214 actaatttttcaaaaattatttggataagtaagtggaaaaatagtggtcatgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtca 313  T
Q  266 cgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaat 364  Q
    |||| |||||||| ||||| ||| |||||||| || |||||| ||||||| ||| ||||||| ||||||  |||||||| ||||||||||| |||||||    
T  314 cgcaactgaaaaagtgtggccacacagaccatatatttggttaactgaaaattttcagagtggtacaaagagatgtacaaattaagggtgtttaccaat 412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1126; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 404 - 308
Alignment:
Q  71 acacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccaca-ttttttagttgcgtgacca 166  Q
    ||||| ||||| | ||||||  ||| ||||||| | |||| ||||||||||||||||||||| | |||||| ||||| ||||| |||||||||||||    
T  404 acacccttaatttgtacatctctttgtaccactctgaaaattttcagttaaccaaatatatggtctgtgtggccacactttttcagttgcgtgacca 308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1126; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 257 - 361
Target Start/End: Complemental strand, 217 - 112
Alignment:
Q  257 tagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaa-ttttccagagtgatacaaatggatgtacacattaagggtg 355  Q
    ||||||||||||| || ||| |||||| |||| ||| |||| || |||||| ||||||| ||||| |||||| ||||||   ||||||||||||| | ||    
T  217 tagtggtcacgcaactaaaacaatgtgatcacacagtccatatatttggttaactgaaatttttcaagagtggtacaaaaaaatgtacacattaaagatg 118  T
Q  356 tctacc 361  Q
    ||||||    
T  117 tctacc 112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 139; Significance: 1e-72; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 97 - 366
Target Start/End: Complemental strand, 22169631 - 22169361
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttccagaatttatttggttaact 195  Q
    ||||||| | |||| ||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| || |||||||||||||||||    
T  22169631 taccactctgaaaatttttagttaaccaaatttatgatatgtgtgaccacatttttttagttgcgtgaccattattttttcaaaatttatttggttaact 22169532  T
Q  196 aagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagacc 295  Q
    | ||  ||||||||||||||| | |||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| ||||  |  ||    
T  22169531 acgttgaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcaacttataaatagtggtcacgcaactgaaaaaatgtgatcacatattcc 22169432  T
Q  296 atgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatct 366  Q
    || || || ||| |||||||||||| | | ||||||||  || ||||||||||||||||||||||||||||    
T  22169431 atatatttagttaactgaaattttcaaaaatgatacaatagggtgtacacattaagggtgtctaccaatct 22169361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 91 - 371
Target Start/End: Complemental strand, 13312778 - 13312498
Alignment:
Q  91 cttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttccagaatttatttgg 189  Q
    ||||| ||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||| |||||| |||||||||||    
T  13312778 cttttgtaccactctgaaaaatttcagttaaccatatatatgatttgtgtgaccacatttttttagttgcgtgaccactatttttccataatttatttgg 13312679  T
Q  190 ttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacg 289  Q
    ||||||||||| ||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||| |||||| || ||| ||||||||| ||||     
T  13312678 ttaactaagtggaaaaatagttgccacgcgcattttagttgcgtgaccacatttttcagcttctaaatagcggtcacccaactg-aaaaatgtgttcaca 13312580  T
Q  290 cagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttatt 371  Q
     ||||||| || |||||| | |||||||||| | | |  |||||| || |||||||||||| ||| ||||||||||||||||    
T  13312579 tagaccatatatttggttaattgaaattttcgaaaatagtacaaaagggtgtacacattaaaggtatctaccaatctttatt 13312498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 100 - 284
Target Start/End: Complemental strand, 35922903 - 35922718
Alignment:
Q  100 cactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttta-gttgcgtgaccattatgtttccagaatttatttggttaactaag 198  Q
    |||||| |||||||| |||||||||||| |||| | |||| ||||| |||||||| ||||| |||||| ||| ||| ||||||||||||||||||||||     
T  35922903 cactttgaaaaatttaagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcagaatttatttggttaactaaa 35922804  T
Q  199 tgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtgg 284  Q
    || |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35922803 tggaaaaatagtggtcatacgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtgg 35922718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 68 - 288
Target Start/End: Complemental strand, 42034959 - 42034740
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgacca 166  Q
    |||||| ||||||||  ||||||| ||| ||||||| ||||||||||||||| | |||||||||| ||||||| | |||||||||| |||||||||||||    
T  42034959 tagacatctttaatgcgtacatccctttgtaccactctaaaaaatttcagttgatcaaatatatggtatgtgtaatcacatttttttagttgcgtgacca 42034860  T
Q  167 ttatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcac 266  Q
     ||  |||||| |||||||||||||||||||||| |||||||||||||||   |||||||||||||||||||||||||||||||||| |||||  |||||    
T  42034859 ctagttttccaaaatttatttggttaactaagtggaaaaatagtggtcacgtgcattttagttgcgtgaccacatttttcagcttct-aataggagtcac 42034761  T
Q  267 gcagctgaaaaaatgtggtcac 288  Q
    ||| ||| ||||||||||||||    
T  42034760 gcaactg-aaaaatgtggtcac 42034740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 107 - 307
Target Start/End: Original strand, 38521914 - 38522113
Alignment:
Q  107 aaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaa 206  Q
    ||||||||| |||||| |  |||||||| |||||||| |||||||||||||||||||||||||  |||| ||||||||||| |||||||||||| |||||    
T  38521914 aaaaatttcggttaactacgtatatgatctgtgtgactacattttttagttgcgtgaccattagttttctagaatttatttagttaactaagtgtaaaaa 38522013  T
Q  207 tagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggt 306  Q
    |||||||||| | ||||||| | |||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||  ||||||| || |||||    
T  38522014 tagtggtcacgcgcatttta-tcgcgtgaccacatttttcagcttctaaatagtggtcatgcaattgaaaaaatgtggtcacatagaccatatatttggt 38522112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 97 - 372
Target Start/End: Complemental strand, 31189747 - 31189474
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccaca--ttttttagttgcgtgaccattatgtttccagaatttatttggttaac 194  Q
    |||||||||||||||||||||||||||||||||||| |     ||||||||  ||||||||||| || || | ||||||||||||||||||||| |||||    
T  31189747 taccactttaaaaaatttcagttaaccaaatatatggt-----tgaccacaatttttttagttgtgtaactactatgtttccagaatttatttgattaac 31189653  T
Q  195 taagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctg--aaaaaatgtggtcacgcag 292  Q
     ||||| |||| |||||||||||  |||||||||||||||| ||||||||||||||||||||||||  ||| |||  ||   |||||||||||||| ||     
T  31189652 caagtggaaaa-tagtggtcacaaacattttagttgcgtgatcacatttttcagcttctaaatagtaatcatgcaattggacaaaaatgtggtcacacat 31189554  T
Q  293 accatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    || || || |||||| |||||||||||| |||||| ||||||  | |||||| ||||| ||||||| |||||||||||||    
T  31189553 actatatatttggttaactgaaattttcgagagtggtacaaaatgttgtacatattaaaggtgtctgccaatctttattc 31189474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 59 - 371
Target Start/End: Original strand, 33958878 - 33959189
Alignment:
Q  59 aatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agtt 157  Q
    |||||| | |||||||| ||||| | || |||||||  ||||||| | |||||||||| ||||||||||||||| | | ||| | |||||||||| || |    
T  33958878 aatgataggtagacacccttaatatgtatatcctttg-taccactctgaaaaatttcacttaaccaaatatatggtctatgtaatcacatttttttagct 33958976  T
Q  158 gcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaat 257  Q
    || ||||||  || ||||||||||||||||||| ||||||||| |||||||||||| || |  |||||||||||||||||| ||||||||| ||||||||    
T  33958977 gcatgaccacaatttttccagaatttatttggtcaactaagtggaaaaatagtggttactcggattttagttgcgtgaccatatttttcagtttctaaat 33959076  T
Q  258 agtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtc 357  Q
    |||||||||||||||||||||||||  ||||  |||  || || || ||| |||||| ||||| ||| || || ||| | || |||||||||||||||||    
T  33959077 agtggtcacgcagctgaaaaaatgtaatcacataga-tatatattttgttaactgaagttttcgagaatggtataaaggaatatacacattaagggtgtc 33959175  T
Q  358 taccaatctttatt 371  Q
    ||| ||||||||||    
T  33959176 tactaatctttatt 33959189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 108 - 334
Target Start/End: Original strand, 19621419 - 19621645
Alignment:
Q  108 aaaatttcagttaaccaaatatatgatatgtgtgaccacattttt-tagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaa 206  Q
    ||||||| | ||||||||||||||  |  |||| ||||||||||| ||||||||| | || ||| ||||||||||||||||||||||||||||| |||||    
T  19621419 aaaatttaacttaaccaaatatattgtcagtgtaaccacatttttgtagttgcgtaatcactatttttccagaatttatttggttaactaagtggaaaaa 19621518  T
Q  207 tagtggtcacactcattttagttgcgtgaccacatttttcagcttct----aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtact 302  Q
    |||||||||| | |||||||||||||||||||| ||||     ||||    ||||||||||||||||  || |||||||||||||| || ||||| || |    
T  19621519 tagtggtcacgcacattttagttgcgtgaccacgtttt-----ttctggaaaaatagtggtcacgcaaatggaaaaatgtggtcacacataccatatatt 19621613  T
Q  303 tggttgactgaaattttccagagtgatacaaa 334  Q
    ||||| ||||||||||| |||| || ||||||    
T  19621614 tggttaactgaaatttttcagaatggtacaaa 19621645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 148 - 372
Target Start/End: Original strand, 43461688 - 43461911
Alignment:
Q  148 ttttttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttca 247  Q
    ||||| ||||| ||||| | ||| ||| |||||||||||||||| |||||||| |||||||||||| ||    |||||||||||||||||  ||||||||    
T  43461688 tttttcagttgtgtgacaactattttttcagaatttatttggtttactaagtggaaaaatagtggttacgtgaattttagttgcgtgaccgtatttttca 43461787  T
Q  248 gcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacat 347  Q
     |||||||||||||||||| || |||||||||| ||||| |  ||||||| || ||| || |||||||||||| | |||| |||||| || |  ||||||    
T  43461788 acttctaaatagtggtcacacaactgaaaaaatatggtc-caaagaccatatatttgattaactgaaattttcaaaagtgctacaaaggggtacacacat 43461886  T
Q  348 taagggtgtctaccaatctttattc 372  Q
    |||| ||||||||| ||||||||||    
T  43461887 taagagtgtctacctatctttattc 43461911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 183 - 374
Target Start/End: Original strand, 43262708 - 43262913
Alignment:
Q  183 tatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttc---agcttctaaat-----------agtggtcacgc 268  Q
    |||||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||   ||||| |||||           ||| |||||      
T  43262708 tatttggttaactaagtggaaaaatagtggtcacgcgcattttagttgtgtgaccacatttttcttcagcttttaaatgttggaaaaatagtagtcacat 43262807  T
Q  269 agctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatcttt 368  Q
    | || || |||||||||||| |||||||| || |||||| ||||||||||| || |||  |||||| || ||||||||||||||||||||||  ||||||    
T  43262808 aactaaacaaatgtggtcacacagaccatatatttggttaactgaaatttttcaaagtagtacaaaggggtgtacacattaagggtgtctacttatcttt 43262907  T
Q  369 attcat 374  Q
    ||||||    
T  43262908 attcat 43262913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 56 - 218
Target Start/End: Complemental strand, 15221779 - 15221616
Alignment:
Q  56 accaatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-a 154  Q
    ||||||||| |  ||||||||||||||| ||||  | ||| || || | | |||||||||||||||| ||||||||| | |||||||||||||||||| |    
T  15221779 accaatgataggcagacacctttaatgtgtacactcctttgtatcattctgaaaaatttcagttaactaaatatatggtctgtgtgaccacattttttta 15221680  T
Q  155 gttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacac 218  Q
     ||| ||||||| ||| ||| |||||||||||| ||||| |||||| ||||| |||||||||||    
T  15221679 attgtgtgaccactattttttcagaatttatttagttaattaagtggaaaaagagtggtcacac 15221616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 222 - 372
Target Start/End: Original strand, 36169394 - 36169543
Alignment:
Q  222 ttttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttcc 321  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||| || ||||| || ||| |   ||||||||||      
T  36169394 ttttagttgcgtgaccatatttttcagcttctaaatagtggtcacgcaactgaaagaatgtggtcacacataccatatatttgatcagctgaaatttttg 36169493  T
Q  322 agagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    |||||| |  |||  |||||| ||||||| | |||||| ||||||||||||    
T  36169494 agagtggtgtaaa-agatgtatacattaaagatgtctagcaatctttattc 36169543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 35922704 - 35922607
Alignment:
Q  274 aaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttatt 371  Q
    ||||||||||||||| || ||||| || ||| || ||||||||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||    
T  35922704 aaaaaatgtggtcacacataccatatatttgattaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgtctaccgatctttatt 35922607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 58 - 167
Target Start/End: Original strand, 36169302 - 36169411
Alignment:
Q  58 caatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagtt 157  Q
    ||||||| | |||||||  ||||||| ||| ||  ||| ||||||||| |||||||| ||||||||||||||||| || |||||||||||||||||||||    
T  36169302 caatgataggtagacactcttaatgtgtacttctctttgtaccactttgaaaaattttagttaaccaaatatatggtaggtgtgaccacattttttagtt 36169401  T
Q  158 gcgtgaccat 167  Q
    ||||||||||    
T  36169402 gcgtgaccat 36169411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 30045994 - 30045885
Alignment:
Q  124 aaatatatgatatgtgtgaccacattttttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcatt 223  Q
    ||||||||| |||||||||| | |||||| ||||| ||||||||||| ||  | |||||||||||||||| ||| || ||||||||||||||| |  |||    
T  30045994 aaatatatggtatgtgtgactatatttttcagttgtgtgaccattattttcaccgaatttatttggttaattaaatggaaaaatagtggtcacgcgtatt 30045895  T
Q  224 ttagttgcgt 233  Q
    ||||||||||    
T  30045894 ttagttgcgt 30045885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 62 - 166
Target Start/End: Complemental strand, 36169536 - 36169432
Alignment:
Q  62 gattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatt-ttttagttgcg 160  Q
    |||||||||||| ||||||||| |||||| ||||| |||||| | ||||||||||| | | |||||||||| |||||||||||||||| ||| |||||||    
T  36169536 gattgctagacatctttaatgtatacatc-ttttacaccactctcaaaaatttcagctgatcaaatatatggtatgtgtgaccacattctttcagttgcg 36169438  T
Q  161 tgacca 166  Q
    ||||||    
T  36169437 tgacca 36169432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 125 - 212
Target Start/End: Complemental strand, 2477400 - 2477312
Alignment:
Q  125 aatatatgatatgtgtgaccacattt-tttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtgg 212  Q
    ||||| |||||||||| ||||||||| |||||||||||| ||| ||| ||| ||||||||||||||||||||||||  |||||||||||    
T  2477400 aatatgtgatatgtgtaaccacatttatttagttgcgtggccactatttttacagaatttatttggttaactaagtcgaaaaatagtgg 2477312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 19621631 - 19621557
Alignment:
Q  107 aaaaatttcagttaaccaaatatatgatatgtgtgaccacattttt-tagttgcgtgaccattatgtttccagaa 180  Q
    |||||||||||||||||||||||||| |||||||||||||||||||  | ||||||||||| ||| |||||||||    
T  19621631 aaaaatttcagttaaccaaatatatggtatgtgtgaccacatttttccatttgcgtgaccactatttttccagaa 19621557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 30704398 - 30704476
Alignment:
Q  180 atttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccaca-tttttcagcttctaaat 257  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||| | ||||||| ||||||||||| |||||    
T  30704398 atttatttggttaactaagtggaaaaatagtggtcacgcgcattttagttgtgcgaccacattttttcagcttttaaat 30704476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 43262898 - 43262816
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattt 150  Q
    |||||||| ||||||| |||| || ||| ||| ||||| |||||||||||||||||||||||||| | |||||||||||||||    
T  43262898 tagacacccttaatgtgtacacccctttgtactactttgaaaaatttcagttaaccaaatatatggtctgtgtgaccacattt 43262816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 7156182 - 7156105
Alignment:
Q  180 atttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaat 257  Q
    |||||||||||||| |||||| ||||||| ||||||| |  |||||||||||| || |||||||||||||||||||||    
T  7156182 atttatttggttaattaagtggaaaaataatggtcacgcatattttagttgcgcgatcacatttttcagcttctaaat 7156105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 35922619 - 35922704
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt 153  Q
    |||||||  ||||||| ||||||| ||| || |||| | ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  35922619 tagacacacttaatgtgtacatccctttgtatcactctgaaaaatttcagttaatcaaatatatggtatgtgtgaccacatttttt 35922704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 358
Target Start/End: Original strand, 15221662 - 15221766
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    ||||||||||||| ||  | ||||||||||||||| |||||||| || || ||| ||||||||||| |||| ||||||||| |  |||||||||||| ||    
T  15221662 aaatagtggtcacacaattaaaaaaatgtggtcacacagaccatatatttagttaactgaaatttttcagaatgatacaaaggagtgtacacattaaagg 15221761  T
Q  354 tgtct 358  Q
    |||||    
T  15221762 tgtct 15221766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 31189488 - 31189571
Alignment:
Q  69 agacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttt 152  Q
    ||||||||||||| | |||| | |||| ||||||| |  ||||||||||||||||||||||||  |||||||||||||||||||    
T  31189488 agacacctttaatatgtacaacattttgtaccactctcgaaaatttcagttaaccaaatatatagtatgtgtgaccacattttt 31189571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 361
Target Start/End: Original strand, 13312696 - 13312799
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    |||||||||||||||| || ||||||||||||||| || | ||| ||  ||||| ||||||||||| ||||||| |||||    | ||||||||||||||    
T  13312696 aaatagtggtcacgcaactaaaaaaatgtggtcacacaaatcatatatatggttaactgaaatttttcagagtggtacaa----aagtacacattaaggg 13312791  T
Q  354 tgtctacc 361  Q
    ||||||||    
T  13312792 tgtctacc 13312799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 33958991 - 33958875
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    |||| ||||||| |||||| |||||||||| | ||  ||||||| || |||||| | ||||||||| ||||||| |||||| |||| |||| ||||||||    
T  33958991 aaattgtggtcatgcagctaaaaaaatgtgattacatagaccatatatttggttaagtgaaatttttcagagtggtacaaa-ggatatacatattaaggg 33958893  T
Q  354 tgtctaccaatctttatt 371  Q
    |||||||| ||| |||||    
T  33958892 tgtctacctatcattatt 33958875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 165
Target Start/End: Original strand, 13312504 - 13312607
Alignment:
Q  62 gattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgt 161  Q
    ||||| |||| ||||||||||| |||| |||||| ||| | |||  ||||||||| ||||||||||||||| | | ||||| ||||||||| ||||| ||    
T  13312504 gattggtagatacctttaatgtgtacacccttttgtactattttcgaaaatttcaattaaccaaatatatggtctatgtgaacacatttttcagttgggt 13312603  T
Q  162 gacc 165  Q
    ||||    
T  13312604 gacc 13312607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 7155998 - 7156076
Alignment:
Q  75 ctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt 153  Q
    ||||||||| |||||| |||| |||||||||| |||||||||||||| |||||||||| | | | ||| ||||||||||    
T  7155998 ctttaatgtgtacatctttttgtaccactttagaaaatttcagttaatcaaatatatggtttatatgatcacatttttt 7156076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 22169362 - 22169467
Alignment:
Q  62 gattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcg 160  Q
    ||||| |||||||| ||||||| |||| ||| || || || |||  ||||||||||||||| |||||||||  || ||||| |||||||||| |||||||    
T  22169362 gattggtagacacccttaatgtgtacaccctattgtatcatttttgaaaatttcagttaactaaatatatggaatatgtgatcacattttttcagttgcg 22169461  T
Q  161 tgacca 166  Q
    ||||||    
T  22169462 tgacca 22169467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 622578 - 622500
Alignment:
Q  148 ttttttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagt 228  Q
    ||||||| |||||||||  |||| ||||||||||||||||| |||| |||||  |||||||||| |||| | |||||||||    
T  622578 ttttttaattgcgtgacacttatttttccagaatttatttgattaagtaagt--aaaaatagtgatcacgcacattttagt 622500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 254 - 351
Target Start/End: Original strand, 35922830 - 35922927
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaag 351  Q
    |||||||||||| ||| || ||||||| ||||| | ||||||||  | |||||| ||| ||||||| || |||||||||||  | |||||||||||||    
T  35922830 aaatagtggtcatgcaacttaaaaaatatggtcccacagaccataaatttggttaacttaaatttttcaaagtgatacaaagcggtgtacacattaag 35922927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 361
Target Start/End: Complemental strand, 36169410 - 36169310
Alignment:
Q  260 tggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtcta 359  Q
    |||||||||| || ||||||||||||||| |  ||||| || |||||| ||| ||||||| || |||| ||||||  || |||||||||||| |||||||    
T  36169410 tggtcacgcaact-aaaaaatgtggtcacacctaccatatatttggttaactaaaatttttcaaagtggtacaaagagaagtacacattaagagtgtcta 36169312  T
Q  360 cc 361  Q
    ||    
T  36169311 cc 36169310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 361
Target Start/End: Original strand, 42034857 - 42034961
Alignment:
Q  257 tagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgt 356  Q
    ||||||||||||| || |||||||||| | || || ||||| || ||| |  |||||||||||  |||||| |||||| |||||||| |||||| | |||    
T  42034857 tagtggtcacgcaactaaaaaaatgtgattacacataccatatatttgatcaactgaaattttttagagtggtacaaagggatgtacgcattaaagatgt 42034956  T
Q  357 ctacc 361  Q
    |||||    
T  42034957 ctacc 42034961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 375
Target Start/End: Complemental strand, 16095581 - 16095508
Alignment:
Q  302 ttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattcatg 375  Q
    |||||| | |||||||||| |||||| || ||| || ||||||||||||  ||||||||| || ||||||||||    
T  16095581 ttggttaattgaaattttcgagagtggtagaaaggggtgtacacattaaatgtgtctacctatatttattcatg 16095508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 334
Target Start/End: Complemental strand, 30704402 - 30704321
Alignment:
Q  253 taaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaa 334  Q
    ||||||||| ||||||| || || ||| || |||||| ||||||| || ||| || ||||||||||| ||||||| ||||||    
T  30704402 taaatagtgatcacgcaactaaataaacgtagtcacggagaccatatatttgattaactgaaattttacagagtggtacaaa 30704321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 2477255 - 2477299
Alignment:
Q  121 accaaatatatgatatgtgtgaccacatttt-ttagttgcgtgac 164  Q
    |||||||||||| | |||||||||||||||| |||||||||||||    
T  2477255 accaaatatatggtttgtgtgaccacattttgttagttgcgtgac 2477299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 1e-72; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 58 - 370
Target Start/End: Complemental strand, 19596996 - 19596680
Alignment:
Q  58 caatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt--ag 155  Q
    ||||||| | ||||| || ||||||| ||||||||||| ||||  |||  ||||||||||||||||||||||||| || |||||||||||||||||  ||    
T  19596996 caatgataggtagacgcccttaatgtgtacatccttttgtacccttttggaaaatttcagttaaccaaatatatggtacgtgtgaccacattttttttag 19596897  T
Q  156 ttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaa 255  Q
     |||||||||| ||||||| |||||||||||||||||||||||||   ||||||| ||||  | ||||||||||||||||||||||||||||||||||||    
T  19596896 ctgcgtgaccactatgttttcagaatttatttggttaactaagtgggtaaatagtagtcatgcgcattttagttgcgtgaccacatttttcagcttctaa 19596797  T
Q  256 atagtggtcacgcagctgaa--aaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    ||| |||| || ||||||||  ||||||||||||||| |||||| || |||||  || || ||||| ||||||| |||||| || |||||||||||| |     
T  19596796 ataatggttacacagctgaaaaaaaatgtggtcacgctgaccatatatttggtcaacagagatttttcagagtggtacaaaggggtgtacacattaaaga 19596697  T
Q  354 tgtctaccaatctttat 370  Q
    |||||| ||||||||||    
T  19596696 tgtctatcaatctttat 19596680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 70 - 374
Target Start/End: Original strand, 17633250 - 17633554
Alignment:
Q  70 gacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgaccatta 169  Q
    |||||||||||||| ||||  | ||| |||||||   |||||||| ||||||||||||||||| | |||||||||||||||||||| ||| ||||||  |    
T  17633250 gacacctttaatgtgtacactcatttgtaccactccgaaaaattttagttaaccaaatatatggtctgtgtgaccacattttttagatgcatgaccacaa 17633349  T
Q  170 tgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttc-agcttctaaatagtggtcacgc 268  Q
    | | |||| ||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||| ||||||| | |||||| || ||||||||||    
T  17633350 tttgtccaaaatttatttggttaactaagttaaaaaatagtggtcacgcgcattttagttgcgtgaccatatttttcaaacttctagat-gtggtcacgc 17633448  T
Q  269 agctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatcttt 368  Q
    | |||||||||||||||||| |||||||| || |||||| ||||||||||| || |||| |||||| || |||||| ||||||||| || ||| ||||||    
T  17633449 aactgaaaaaatgtggtcacacagaccatatatttggttaactgaaatttttcaaagtggtacaaaggggtgtacatattaagggtatcaacctatcttt 17633548  T
Q  369 attcat 374  Q
    ||||||    
T  17633549 attcat 17633554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 97 - 372
Target Start/End: Complemental strand, 9809250 - 9808972
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt---agttgcgtgaccattatgtttccagaatttatttggttaa 193  Q
    ||||||| || ||| ||| |||||||||| |||||| | ||||||||||||||||||   ||||||||||||||| | |||||| || ||||||||||||    
T  9809250 taccactctagaaattttaagttaaccaagtatatggtctgtgtgaccacatttttttttagttgcgtgaccattttttttccataaattatttggttaa 9809151  T
Q  194 ctaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcaga 293  Q
    |||| || ||||||||||||||| | ||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9809150 ctaaatggaaaaatagtggtcacgcgcatttgagttgcgtgactacatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcacgcaga 9809051  T
Q  294 ccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    |||| || || ||| |||||| |||| || || | |||||| || |||||| |||||||||||| ||| ||||||||||    
T  9809050 ccatatatttagttaactgaattttttcatagcggtacaaaagggtgtacatattaagggtgtcaacctatctttattc 9808972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 58 - 288
Target Start/End: Original strand, 1966731 - 1966960
Alignment:
Q  58 caatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagtt 157  Q
    ||||||| | |||||||| ||| ||| |||| |||||| ||||||| | |||| ||||||||||||||||||||| | ||||||||||||||||||||||    
T  1966731 caatgataggtagacacccttactgtatacacccttttgtaccactctgaaaa-tttcagttaaccaaatatatggtctgtgtgaccacattttttagtt 1966829  T
Q  158 gcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaat 257  Q
    ||||||||| ||  |||||||||||||||||||||| |||||| ||||||||||||||| | || |||||||||||||||||||||||||||||||||||    
T  1966830 gcgtgaccactagttttccagaatttatttggttaattaagtggaaaaatagtggtcacgcgca-tttagttgcgtgaccacatttttcagcttctaaat 1966928  T
Q  258 agtggtcacgcagct-gaaaaaatgtggtcac 288  Q
    |||||||||||| ||  |||||||||||||||    
T  1966929 agtggtcacgcaactaaaaaaaatgtggtcac 1966960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 125 - 370
Target Start/End: Complemental strand, 16583742 - 16583496
Alignment:
Q  125 aatatatgatatgtgtgaccacattttt-tagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcatt 223  Q
    |||||||| | | ||||| ||||||||| |||||||||||| | ||| || ||| ||||||||||||||| |||||| ||||||||||||||| | ||||    
T  16583742 aatatatgttttatgtgatcacatttttgtagttgcgtgactactattttaccataatttatttggttaattaagtggaaaaatagtggtcacgcgcatt 16583643  T
Q  224 ttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccag 323  Q
    |||||||| ||| || |||||||||||||||||||||||||||||| ||||||||||||||||||    ||||| || |||||| |||||||||||| ||    
T  16583642 ttagttgcatgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcacatcaaccatatatttggttaactgaaattttcgag 16583543  T
Q  324 agtgatacaaatggatgtacacattaagggtgtctaccaatctttat 370  Q
    |||| |||||| |||||||| ||||||||||||||||||||||||||    
T  16583542 agtggtacaaagggatgtacgcattaagggtgtctaccaatctttat 16583496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 97 - 372
Target Start/End: Complemental strand, 9810937 - 9810658
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt--agttgcgtgacca--ttatgtttccagaatttatttggtta 192  Q
    ||||||| || ||| ||| ||||||||||||||||| | ||||||||||||||||||  |||||||||||||  || | ||| || || |||||||||||    
T  9810937 taccactctagaaattttaagttaaccaaatatatggtctgtgtgaccacattttttttagttgcgtgaccaattttttttttcataaattatttggtta 9810838  T
Q  193 actaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcag 292  Q
    ||||| || |||||||| |||||| | ||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||| |||||     
T  9810837 actaaatggaaaaatagaggtcacgcacatttgagttgcgtgactacattttttagcttctaaatagtggtcacgcaactgaaaaaatgtggtaacgcaa 9810738  T
Q  293 accatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    ||||| || ||  || ||||||||||| || |||| |||||| || |||||| |||||||||||| ||| ||||||||||    
T  9810737 accatatatttaattaactgaaatttttcatagtggtacaaaagggtgtacatattaagggtgtcaacctatctttattc 9810658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 97 - 321
Target Start/End: Complemental strand, 42908741 - 42908518
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgaccattatgtttccagaatttatttggttaacta 196  Q
    ||||||| | |||||||| ||||||||||||||||| ||||||||||||||||||||||||| || |||| ||| |||||||||||||||||||||||||    
T  42908741 taccactctgaaaaatttaagttaaccaaatatatggtatgtgtgaccacattttttagttgagtcaccactatttttccagaatttatttggttaacta 42908642  T
Q  197 agtgaaaaaatagtggtcacactcattttagttgcgtgaccaca-tttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagacc 295  Q
    || | ||| ||||||||||| | |||||||||||||||| |||| ||||||| ||| ||||| |||||||| || ||| |||||| ||||||  ||||||    
T  42908641 agaggaaacatagtggtcacgcgcattttagttgcgtgatcacattttttcaacttttaaat-gtggtcacacaactg-aaaaatatggtcaaacagacc 42908544  T
Q  296 atgtacttggttgactgaaattttcc 321  Q
    || || |||||| ||| |||||||||    
T  42908543 atatatttggttcactaaaattttcc 42908518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 97 - 365
Target Start/End: Complemental strand, 24669347 - 24669077
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttccagaatttatttggttaact 195  Q
    ||||||| | |||||||| |||||| |||||||||| | |||||||||||||||||| ||||||||||||| |||           ||||||||||||||    
T  24669347 taccactctgaaaaatttaagttaatcaaatatatggtctgtgtgaccacattttttcagttgcgtgaccactat-----------ttatttggttaact 24669259  T
Q  196 aagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttct-----------aaatagtggtcacgcagctgaaaaaatgtgg 284  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||| || ||||           |||||||||||||||| ||||||||||||||    
T  24669258 aagtgaaaaaatagtggtcacacgaattttagttgcgtgaccatatttttgagtttctaaatgctgaaaaaatagtggtcacgcaactgaaaaaatgtgg 24669159  T
Q  285 tcacgcagaccat-gtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatc 365  Q
    |||| || |||||  || |||| | ||| |||||||| ||| ||||||||||||||||||  | ||||||||||||||||||    
T  24669158 tcacacataccataatatttggctaacttaaattttctagaatgatacaaatggatgtacgaaataagggtgtctaccaatc 24669077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 98 - 374
Target Start/End: Original strand, 8740725 - 8741004
Alignment:
Q  98 accactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatg---tttccagaatttatttggttaa 193  Q
    |||||| | |||||||  |||||| |||||||||| | | |||||||||||||||| ||||| ||||||| ||     |||||| ||||||||| |||||    
T  8740725 accactctgaaaaattcaagttaatcaaatatatggtttatgtgaccacatttttttagttg-gtgaccactactacttttccataatttatttagttaa 8740823  T
Q  194 ctaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctg-aaaaaatgtggtcacgcag 292  Q
    ||||||  ||||||||||||||| | |||||||||  ||||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||||| |||    
T  8740824 ctaagtagaaaaatagtggtcacgcgcattttagta-cgtgaccacatttttcagcttctaaatagtgatcacgcaactgaaaaaaatatggtcacacag 8740922  T
Q  293 accatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattcat 374  Q
    | |||  | ||| || ||||||| |||  ||||||||||||| | ||||||||||| | | |||||||| ||||||||||||    
T  8740923 atcatacatttgattaactgaaaattttgagagtgatacaaaagaatgtacacattgaagatgtctaccgatctttattcat 8741004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 177 - 373
Target Start/End: Original strand, 33179775 - 33179971
Alignment:
Q  177 agaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaa 276  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| ||||||||||||  |||||||||||||||||||||||||||    
T  33179775 agaatttatttgattaactaagtggaaaaatagtggtcacacgcattttagttgtgtggccacatttttcactttctaaatagtggtcacgcagctgaaa 33179874  T
Q  277 aaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattca 373  Q
    | || |||| || || ||||| || || ||| | | |||||||| | |||| || |||   || |||||||||||| |||||||||||| |||||||    
T  33179875 agatatggtaacacataccatatatttagttaattaaaattttcgatagtggtataaagaaatatacacattaaggatgtctaccaatcattattca 33179971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 179 - 368
Target Start/End: Original strand, 55666844 - 55667031
Alignment:
Q  179 aatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaa 278  Q
    |||||||||| ||||||||||| |||||||||||||||   |||||||||| ||||||||| ||||||||||| |||||| |||||||||| |||||||     
T  55666844 aatttatttgcttaactaagtggaaaaatagtggtcacgaacattttagtt-cgtgaccacgtttttcagcttataaataatggtcacgcaactgaaaa- 55666941  T
Q  279 atgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatcttt 368  Q
    |||||||||| |||||||| || || ||| |||||||||||| | |||| |||||| |  |||||| |||||||||| |||| |||||||    
T  55666942 atgtggtcacacagaccatatatttagttaactgaaattttcgaaagtggtacaaaggagtgtacatattaagggtggctactaatcttt 55667031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 97 - 263
Target Start/End: Complemental strand, 14351236 - 14351069
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttt-tagttgcgtgaccattatgtttccagaatttatttggttaact 195  Q
    ||||||| | ||||| || ||||||||||||||||| | |||||||||| |||||| |||||||||||||| ||| ||  || |||||||||||||||||    
T  14351236 taccactctcaaaaaatttagttaaccaaatatatggtttgtgtgaccatatttttctagttgcgtgaccactattttgacaaaatttatttggttaact 14351137  T
Q  196 aagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggt 263  Q
    ||||| ||||||||||||||    |||||||||||||||| ||||| ||| |||||| ||||||||||    
T  14351136 aagtggaaaaatagtggtcatggacattttagttgcgtgatcacatcttttagcttcaaaatagtggt 14351069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 117 - 319
Target Start/End: Original strand, 35544376 - 35544577
Alignment:
Q  117 gttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcac 216  Q
    ||||| |||| ||||| | |||||||||| ||||||||||||   ||  | ||| | |||| ||||||||| ||||| |||||| |||||||||| ||||    
T  35544376 gttaaacaaaaatatggtttgtgtgaccatattttttagttgtacgattactatttatccaaaatttatttagttaattaagtggaaaaatagtgatcac 35544475  T
Q  217 actcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaat 316  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||  || | ||||||||||| |||| || ||||| || ||| || ||||||||    
T  35544476 acgcattt-agttgcgtgaccacatttttcagcttctaaatagtggtcatacaacggaaaaaatgtgatcacacataccatatatttgattaactgaaat 35544574  T
Q  317 ttt 319  Q
    |||    
T  35544575 ttt 35544577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 179 - 277
Target Start/End: Original strand, 33249634 - 33249732
Alignment:
Q  179 aatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaa 277  Q
    |||||||||| ||||||| ||| ||||||||||||||||| |||||||  ||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  33249634 aatttatttgattaactaggtggaaaaatagtggtcacacgcattttatgtgcgtgaccacatttttcaccttctaaatagtggtcacgcaactgaaaa 33249732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 141 - 288
Target Start/End: Complemental strand, 2433842 - 2433694
Alignment:
Q  141 gaccacattttttagttgcgtgaccattatgtttc--cagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgacca 238  Q
    ||||| ||||||||||||| | |||| ||| |||   || |||||||||||||||| |||||||||||||||||||||   ||||||  || | ||||||    
T  2433842 gaccatattttttagttgcattaccactattttttttcataatttatttggttaacaaagtgaaaaaatagtggtcacgtgcatttttttt-catgacca 2433744  T
Q  239 catttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcac 288  Q
    |||||||||||||||||||||||||||  || ||||||||||||| ||||    
T  2433743 catttttcagcttctaaatagtggtcaaacaactgaaaaaatgtgatcac 2433694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 17633510 - 17633440
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgacca 166  Q
    ||||||||| |||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||    
T  17633510 taccactttgaaaaatttcagttaaccaaatatatggtctgtgtgaccacattttttcagttgcgtgacca 17633440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 24669270 - 24669363
Alignment:
Q  253 taaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacaca 346  Q
    ||||||||||||||||| |||||||||||||||||| |||||||| || ||| || ||| ||||||| ||||||| |||||| || ||||||||    
T  24669270 taaatagtggtcacgcaactgaaaaaatgtggtcacacagaccatatatttgattaacttaaatttttcagagtggtacaaaggggtgtacaca 24669363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 55666993 - 55666920
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgaccattat 170  Q
    |||||||||  ||||||||||||||| ||||||||| | ||||||||||||||||| |||||||||||||||||    
T  55666993 taccactttcgaaaatttcagttaactaaatatatggtctgtgtgaccacatttttcagttgcgtgaccattat 55666920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 257 - 361
Target Start/End: Complemental strand, 1966841 - 1966739
Alignment:
Q  257 tagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgt 356  Q
    ||||||||||||| || ||||||||||||||| |||||||| || |||||| ||||||||||| ||||||| |||||| || |||| ||| |||||||||    
T  1966841 tagtggtcacgcaact-aaaaaatgtggtcacacagaccatatatttggttaactgaaatttt-cagagtggtacaaaagggtgtatacagtaagggtgt 1966744  T
Q  357 ctacc 361  Q
    |||||    
T  1966743 ctacc 1966739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 19596882 - 19596988
Alignment:
Q  256 atagtggtcacgcagctgaaaa-aatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggt 354  Q
    ||||||||||||||||| |||| ||||||||||| |  ||||| || |||||| |||||||||||||| |  | |||||| ||||||||||||||||||     
T  19596882 atagtggtcacgcagctaaaaaaaatgtggtcacacgtaccatatatttggttaactgaaattttccaaaagggtacaaaaggatgtacacattaagggc 19596981  T
Q  355 gtctacc 361  Q
    |||||||    
T  19596982 gtctacc 19596988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 278 - 372
Target Start/End: Original strand, 19746939 - 19747033
Alignment:
Q  278 aatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    ||||||||||  ||||||||||| || ||| |||||||||||| ||| ||||||||| || ||||||||||||  |||||||| |||||||||||    
T  19746939 aatgtggtcaaacagaccatgtatttagttaactgaaattttcgagaatgatacaaaggggtgtacacattaaaagtgtctactaatctttattc 19747033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 278 - 372
Target Start/End: Complemental strand, 19792867 - 19792773
Alignment:
Q  278 aatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    ||||||||||  ||||||||||| || ||| |||||||||||| ||| ||||||||| || ||||||||||||  |||||||| |||||||||||    
T  19792867 aatgtggtcaaacagaccatgtatttagttaactgaaattttcgagaatgatacaaaggggtgtacacattaaaagtgtctactaatctttattc 19792773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 16583501 - 16583606
Alignment:
Q  62 gattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcg 160  Q
    ||||| |||||||| ||||||  ||||||| ||| ||||||| |  ||||||||||||||||||||||||| |   |||||||||||||||| |||||||    
T  16583501 gattggtagacacccttaatgcgtacatccctttgtaccactctcgaaaatttcagttaaccaaatatatggttgatgtgaccacattttttcagttgcg 16583600  T
Q  161 tgacca 166  Q
    ||||||    
T  16583601 tgacca 16583606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 223 - 288
Target Start/End: Complemental strand, 20874880 - 20874815
Alignment:
Q  223 tttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcac 288  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||||| |||||||||| |||||||    
T  20874880 tttagttgcgttaccacatttttcagcttctaaaaagtgatcacgcaactgaaaaaatatggtcac 20874815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 17633333 - 17633250
Alignment:
Q  274 aaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtc 357  Q
    ||||||||||||||| |||||||| || |||||| ||| ||||||| | ||||| ||||||||  |||||||||||| ||||||    
T  17633333 aaaaaatgtggtcacacagaccatatatttggttaactaaaatttttcggagtggtacaaatgagtgtacacattaaaggtgtc 17633250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 9808987 - 9809084
Alignment:
Q  70 gacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgacca 166  Q
    |||||| ||||| | |||| |||||| |||| || | ||||| |||||||||| ||||||||| | || ||||||||||||||| |||||||||||||    
T  9808987 gacacccttaatatgtacacccttttgtaccgctatgaaaaaattcagttaactaaatatatggtctgcgtgaccacattttttcagttgcgtgacca 9809084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 351
Target Start/End: Original strand, 9809194 - 9809271
Alignment:
Q  274 aaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaag 351  Q
    ||||||||||||||| |||||||| ||||||||| ||| ||| |||| |||||| ||||||| | | |||||||||||    
T  9809194 aaaaaatgtggtcacacagaccatatacttggttaacttaaaatttctagagtggtacaaataggtttacacattaag 9809271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 9810673 - 9810770
Alignment:
Q  70 gacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgacca 166  Q
    |||||| ||||| | |||| |||||| ||||||| | |||||||||||||||  ||||||||| | || || |||||||||||| |||||||||||||    
T  9810673 gacacccttaatatgtacacccttttgtaccactatgaaaaatttcagttaattaaatatatggtttgcgttaccacattttttcagttgcgtgacca 9810770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 371
Target Start/End: Original strand, 25007632 - 25007711
Alignment:
Q  291 agaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctttatt 371  Q
    ||||||| || |||||| |||||||||||| ||| || |||||| || |||| |||||||| |||||||||||||||||||    
T  25007632 agaccatatatttggttaactgaaattttcgagaatggtacaaaggg-tgtatacattaagagtgtctaccaatctttatt 25007711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 35544584 - 35544532
Alignment:
Q  101 actttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt 153  Q
    ||||| ||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  35544584 acttttaaaaatttcagttaatcaaatatatggtatgtgtgatcacatttttt 35544532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 24669074 - 24669201
Alignment:
Q  59 aatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatat-atgatatgtgtgaccacatttttt-agt 156  Q
    |||||||| |||||||| ||| |   ||||||| ||| || || | || ||||||| ||||| |||||||| ||| |||||||||||||||||||| |||    
T  24669074 aatgattggtagacacccttatttcgtacatccatttgtatcattctagaaaatttaagttagccaaatattatggtatgtgtgaccacattttttcagt 24669173  T
Q  157 tgcgtgaccattatgtttccagaattta 184  Q
    |||||||||| ||| ||| ||| |||||    
T  24669174 tgcgtgaccactattttttcagcattta 24669201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 279
Target Start/End: Original strand, 1966978 - 1967016
Alignment:
Q  241 tttttcagcttctaaatagtggtcacgcagctgaaaaaa 279  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  1966978 tttttcagcttctaaatagtggtcacgcaactgaaaaaa 1967016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 351
Target Start/End: Original strand, 9810881 - 9810958
Alignment:
Q  274 aaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaag 351  Q
    ||||||||||||||| |||||||| || |||||| ||| ||| |||| |||||| ||||||| | | |||||||||||    
T  9810881 aaaaaatgtggtcacacagaccatatatttggttaacttaaaatttctagagtggtacaaataggtttacacattaag 9810958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 361
Target Start/End: Original strand, 14351160 - 14351267
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    |||||||||||||||| ||  |||||| ||||||| || ||||| || |||||| ||| || ||||  |||||| ||||||    || ||||||||||||    
T  14351160 aaatagtggtcacgcaactagaaaaatatggtcacacaaaccatatatttggttaactaaattttttgagagtggtacaaagaagtgcacacattaaggg 14351259  T
Q  354 tgtctacc 361  Q
    ||||||||    
T  14351260 tgtctacc 14351267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 19596685 - 19596776
Alignment:
Q  62 gattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt 153  Q
    ||||| |||||| ||||||||| |||| || ||| ||||||| | |||||| || ||| |||||||||||| |  | |||||||||||||||    
T  19596685 gattgatagacatctttaatgtgtacacccctttgtaccactctgaaaaatctctgttgaccaaatatatggtcagcgtgaccacatttttt 19596776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 33249568 - 33249622
Alignment:
Q  92 ttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccac 146  Q
    |||||||||| | ||||||||| ||||||| ||||||| || |||||||||||||    
T  33249568 ttttataccattctaaaaaattccagttaatcaaatatgtggtatgtgtgaccac 33249622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 42908685 - 42908747
Alignment:
Q  274 aaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatg 336  Q
    ||||||||||||||| || ||||| || |||||| ||| ||||||| ||||||| ||||||||    
T  42908685 aaaaaatgtggtcacacataccatatatttggttaacttaaatttttcagagtggtacaaatg 42908747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 1966979 - 1966931
Alignment:
Q  120 aaccaaatatatgatatgtgtgaccacatt--ttttagttgcgtgacca 166  Q
    |||||||||||||| || ||||||||||||  |||||||||||||||||    
T  1966979 aaccaaatatatgacatatgtgaccacattttttttagttgcgtgacca 1966931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 374
Target Start/End: Complemental strand, 23048987 - 23048934
Alignment:
Q  321 cagagtgatacaaatggatgtacacattaagggtgtctaccaatctttattcat 374  Q
    ||||||| |||||| || |||||||||||||  |||||| ||||||||||||||    
T  23048987 cagagtgttacaaacgggtgtacacattaagaatgtctatcaatctttattcat 23048934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 2e-71; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 58 - 278
Target Start/End: Original strand, 29676982 - 29677202
Alignment:
Q  58 caatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagtt 157  Q
    ||||||| | |||||||||||||||| ||| ||| ||| || |||||| |||||||| |||||||||||||||||   ||||||||||||||||||||||    
T  29676982 caatgatagttagacacctttaatgtgtacgtccctttgtagcactttgaaaaattttagttaaccaaatatatggcctgtgtgaccacattttttagtt 29677081  T
Q  158 gcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaat 257  Q
    || |||||| ||| ||| ||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  29677082 gcatgaccactattttttcagaatttatttggttaactaagtggaaaaatagtggtcacgcacattttagttgcgtgaccacatttttcagcttctaaat 29677181  T
Q  258 agtggtcacgcagctgaaaaa 278  Q
    ||||||||| || ||||||||    
T  29677182 agtggtcactcaactgaaaaa 29677202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 58 - 373
Target Start/End: Complemental strand, 34364443 - 34364130
Alignment:
Q  58 caatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagtt 157  Q
    ||||||||| | ||||| ||||| || ||||||| ||| ||| ||| | |||||||| |||||| |||||||||| | ||||| | |||||| |||||||    
T  34364443 caatgattggttgacacatttaacgtgtacatccctttgtactactctgaaaaatttaagttaatcaaatatatgctctgtgtaatcacattctttagtt 34364344  T
Q  158 gcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaat 257  Q
    | ||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||  |||||||||||| |||||||||| |||||||||||||||    
T  34364343 gtgtgaccattatttttccagaatttttttggttaactaagtgaaaaaattgtggtcacgttcattttagttgtgtgaccacatgtttcagcttctaaat 34364244  T
Q  258 agtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtc 357  Q
    | ||| |||||| ||| |||||| ||||||| |||||||| || || ||| ||| ||||||||||||||| ||||||| ||||| || ||||| ||||||    
T  34364243 a-tggccacgcaactg-aaaaatatggtcacacagaccatatatttagttaacttaaattttccagagtggtacaaatagatgtgcatattaatggtgtc 34364146  T
Q  358 taccaatctttattca 373  Q
     ||| |||||||||||    
T  34364145 aacctatctttattca 34364130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 68 - 365
Target Start/End: Complemental strand, 34490391 - 34490094
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgacca 166  Q
    |||||||  ||||||| |||| |  ||| ||||||| | ||||||||||||| || ||||||||| | |||||||||||||||||| |||||||||||||    
T  34490391 tagacactcttaatgtgtacaccactttgtaccactctgaaaaatttcagtttacaaaatatatggtctgtgtgaccacatttttttagttgcgtgacca 34490292  T
Q  167 tta-tgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtca 265  Q
     || | ||| |||||||||||||||||||||| |  ||||||||||||||  | ||||||| |||| ||||||||||||| |||||||||||||||||||    
T  34490291 ctagttttttcagaatttatttggttaactaactagaaaaatagtggtcatgcgcatttta-ttgcatgaccacattttttagcttctaaatagtggtca 34490193  T
Q  266 cgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatc 365  Q
      || |||||||||||| ||||| |||||||| || || ||| ||||||||||| || |||| ||| ||  ||| |||||||||||||||||||||||||    
T  34490192 tacaactgaaaaaatgt-gtcacacagaccatatatttagttaactgaaattttacatagtggtaccaaaagatatacacattaagggtgtctaccaatc 34490094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 94 - 300
Target Start/End: Original strand, 29167743 - 29167948
Alignment:
Q  94 ttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgaccattatgtttccagaatttatttggttaa 193  Q
    |||||||| ||| |||||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||| ||  ||| | ||||||||||||||||    
T  29167743 ttataccattttgaaaaatttcagttaactaaatatatggtttgtgtgaccacattttttagttgcctgaccactagtttttcggaatttatttggttaa 29167842  T
Q  194 ctaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcaga 293  Q
    ||||||| ||||||||||||||  | ||||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||| | || ||||    
T  29167843 ctaagtggaaaaatagtggtcatgcgcatttta-ttgcgtgaccatattttttagcttctaaatagtggtcacgcaactgaaaaaatgtgattacacaga 29167941  T
Q  294 ccatgta 300  Q
    || ||||    
T  29167942 ccctgta 29167948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 69 - 374
Target Start/End: Complemental strand, 5831734 - 5831429
Alignment:
Q  69 agacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccat 167  Q
    |||||||||||| || |||| || ||| || |||| | |||||||||| ||||||||||||||| | |||||||||| ||||||| |||||||||||||     
T  5831734 agacacctttaacgtgtacacccctttgtatcactctgaaaaatttcaattaaccaaatatatggtctgtgtgaccatatttttttagttgcgtgaccac 5831635  T
Q  168 tatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacg 267  Q
    ||  ||||||||||||||||||||||||||||| |||||| ||||| | || |||||||||| || ||||| |||||| | ||||||||||||||||| |    
T  5831634 taattttccagaatttatttggttaactaagtggaaaaattgtggtaatacgcattttagttacgggaccatattttttaacttctaaatagtggtcatg 5831535  T
Q  268 cagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctaccaatctt 367  Q
    || |  | ||||| || |||| || ||||| |  || ||| ||| ||||||| |||| || |||||| || ||||| ||||||  |||||||||||||||    
T  5831534 caacaaacaaaatatgatcacacataccatatctttagttaactaaaatttttcagaatgttacaaaagggtgtactcattaa-agtgtctaccaatctt 5831436  T
Q  368 tattcat 374  Q
    |||||||    
T  5831435 tattcat 5831429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 107 - 335
Target Start/End: Complemental strand, 38952071 - 38951839
Alignment:
Q  107 aaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaa 205  Q
    |||||||||||||||| |||| |||| ||| |||||||| ||||||| |||||| |||||| ||| | |||| |||||||||||||||||||||  ||||    
T  38952071 aaaaatttcagttaacaaaatgtatggtatatgtgaccatatttttttagttgcttgaccactatttctccaaaatttatttggttaactaagtagaaaa 38951972  T
Q  206 atagtggtcacactcattttagttgcgtgaccaca--tttttcagcttctaaatagtggtcacgcagctg-aaaaaatgtggtcacgcagaccatgtact 302  Q
    |||||||||| || ||||||||||||||||| | |  |||||||| |||||||||||||||||||||||| ||||||||||||  |  ||||||| || |    
T  38951971 atagtggtcagacgcattttagttgcgtgactatatttttttcagtttctaaatagtggtcacgcagctgaaaaaaatgtggtttcatagaccatatatt 38951872  T
Q  303 tggttgactgaaattttccagagtgatacaaat 335  Q
    ||||| ||| |||||||| |||||| |||||||    
T  38951871 tggttaacttaaattttcgagagtggtacaaat 38951839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 97 - 280
Target Start/End: Complemental strand, 25238650 - 25238467
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttccagaatttatttggttaact 195  Q
    ||||||| | ||||||||||||||| |||||||||| | | |||||||||||||||| ||||  ||||| | ||  ||| ||||||||||||||||||||    
T  25238650 taccactctgaaaaatttcagttaatcaaatatatggtttctgtgaccacatttttttagttatgtgactactagtttttcagaatttatttggttaact 25238551  T
Q  196 aagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaat 280  Q
    ||||| |||||||||||| || | ||||||| || ||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  25238550 aagtggaaaaatagtggttacgcacatttta-ttacgtgaccacattttttagcttctaaatagtggtcacgcaactgaaaaaat 25238467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 97 - 288
Target Start/End: Complemental strand, 42604392 - 42604200
Alignment:
Q  97 taccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatt-ttttagttgcgtgaccattatgtttccagaatttatttggttaact 195  Q
    ||||||||| |||| |||  ||||| |||||||||| | |||||||||||||| ||||||||| |||| || ||| ||| |||||||||||| |||||||    
T  42604392 taccactttgaaaatttttggttaatcaaatatatggtttgtgtgaccacattgttttagttgtgtgatcactattttttcagaatttatttcgttaact 42604293  T
Q  196 aagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcac 288  Q
    ||||| ||||||||||||||| | |||||||||||  |||||| | |||| ||||||||||||||||| | ||| ||||||||||||||||||    
T  42604292 aagtggaaaaatagtggtcacgcgcattttagttgtatgaccatacttttaagcttctaaatagtggtgatgcaactgaaaaaatgtggtcac 42604200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 181 - 369
Target Start/End: Original strand, 517433 - 517623
Alignment:
Q  181 tttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaat 280  Q
    ||||||||||||||||||| |||||||||| ||||   ||||||||||||||||| || |||||| | ||||||||||||||| |||||  || ||||||    
T  517433 tttatttggttaactaagttaaaaaatagtagtcatgttcattttagttgcgtgatcatattttttaacttctaaatagtggttacgcaattg-aaaaat 517531  T
Q  281 gtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaat---ggatgtacacattaagggtgtctaccaatcttta 369  Q
    |||||  | || | ||| || |||||| ||| |||||||  ||||||||||||||    |||||||||||||||| |||||| | |||||||    
T  517532 gtggttgcacatatcatatatttggttaacttaaatttttgagagtgatacaaataaatgatgtacacattaaggatgtctatcgatcttta 517623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 108 - 216
Target Start/End: Complemental strand, 2570071 - 2569962
Alignment:
Q  108 aaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaa 206  Q
    ||||||| |||||||||| |||||| | ||||| |||| ||||||| ||||||||||||| ||| |||| |||||||||||||||||||||||| |||||    
T  2570071 aaaatttaagttaaccaagtatatggtttgtgttaccatattttttgagttgcgtgaccactatttttctagaatttatttggttaactaagtggaaaaa 2569972  T
Q  207 tagtggtcac 216  Q
    ||||||||||    
T  2569971 tagtggtcac 2569962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 58 - 374
Target Start/End: Complemental strand, 5855317 - 5855003
Alignment:
Q  58 caatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttt-ttagt 156  Q
    ||||||| | ||||||||  |||| | ||||  ||||| ||||||| | |||||||| ||||||||||||||||| |||||||||||||||||  |||||    
T  5855317 caatgataggtagacaccactaatatgtacactcttttgtaccactctgaaaaatttaagttaaccaaatatatggtatgtgtgaccacatttagttagt 5855218  T
Q  157 tgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaa 256  Q
    |||||||||| |||           |||||||||||| ||| || ||||||||  |||||    |||||||||| |||||||||| ||| ||||| ||||    
T  5855217 tgcgtgaccactat-----------ttatttggttaattaaatggaaaaatagacgtcacgt--attttagttgtgtgaccacatattttagcttttaaa 5855131  T
Q  257 ta-----------gtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacac 345  Q
    |            |||||||| || ||||||| |||||||||| |||||||| || ||||||  |||||||||| || |||  |||||| ||||||| ||    
T  5855130 tgttggaaaaattgtggtcacacaactgaaaatatgtggtcacacagaccatatatttggttagctgaaatttttca-agtagtacaaagggatgtaaac 5855032  T
Q  346 attaagggtgtctaccaatctttattcat 374  Q
    |||||| ||||||||| ||||||||||||    
T  5855031 attaagcgtgtctacctatctttattcat 5855003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 110 - 315
Target Start/End: Complemental strand, 9468261 - 9468064
Alignment:
Q  110 aatttcagttaaccaaatatatgatatgtgtgaccacatttttt--agttgcgtgaccattatgtttccagaatttatttggttaactaagtga-aaaaa 206  Q
    ||||| ||||||||||||||||| | | |||||||| |||||||  |||||||||| ||||||         |||||||||||||||||||||  |||||    
T  9468261 aatttaagttaaccaaatatatggt-tctgtgaccatattttttttagttgcgtgatcattat---------atttatttggttaactaagtggcaaaaa 9468172  T
Q  207 tagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggt 306  Q
    |||| ||||||  ||||||||||| |||| |||||||| |||||| |||||| ||||||  || |||||||||| ||||||| || ||||| || |||||    
T  9468171 tagtagtcacatacattttagttgtgtgatcacattttacagcttttaaata-tggtcagacaactgaaaaaatatggtcacacataccatatatttggt 9468073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 358
Target Start/End: Original strand, 5831633 - 5831734
Alignment:
Q  257 tagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgt 356  Q
    ||||||||||||| || ||||||| ||||||| |||||||| || |||||| | ||||||||| |||||||||||||| || ||||||| |||| |||||    
T  5831633 tagtggtcacgcaactaaaaaaatatggtcacacagaccatatatttggttaattgaaatttttcagagtgatacaaaggggtgtacacgttaaaggtgt 5831732  T
Q  357 ct 358  Q
    ||    
T  5831733 ct 5831734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 181 - 257
Target Start/End: Complemental strand, 2996101 - 2996025
Alignment:
Q  181 tttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaat 257  Q
    |||||||||||||||||| | |||||||| || ||| | ||||||| ||||||||||||||||||||||||||||||    
T  2996101 tttatttggttaactaagcggaaaaatagcggccacgcgcattttatttgcgtgaccacatttttcagcttctaaat 2996025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 257 - 361
Target Start/End: Original strand, 34490289 - 34490393
Alignment:
Q  257 tagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgt 356  Q
    ||||||||||||| || ||||||||||||||| |||||||| || || ||  ||||||||||| ||||||| ||||||  | ||||||||||||| ||||    
T  34490289 tagtggtcacgcaactaaaaaaatgtggtcacacagaccatatattttgtaaactgaaatttttcagagtggtacaaagtggtgtacacattaagagtgt 34490388  T
Q  357 ctacc 361  Q
    |||||    
T  34490389 ctacc 34490393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 108 - 208
Target Start/End: Original strand, 9929677 - 9929778
Alignment:
Q  108 aaaatttcagttaaccaaatatatgatatgtgtgaccacatt-ttttagttgcgtgaccattatgtttccagaatttatttggttaactaagtgaaaaaa 206  Q
    ||||||| ||||||||||||||||| | ||| |||||||||| ||||||||||| ||||  ||| ||| || ||||||||||||||||||| || |||||    
T  9929677 aaaatttaagttaaccaaatatatggtttgtatgaccacattattttagttgcgcgaccgatattttttcaaaatttatttggttaactaaatggaaaaa 9929776  T
Q  207 ta 208  Q
    ||    
T  9929777 ta 9929778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 13350999 - 13350892
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    ||||||| | || ||| ||||||||| ||| |||| || ||||| || |||||| |||||||||||| |||||| |||||| || ||||||||||||||     
T  13350999 aaatagtagccatgcaactgaaaaaacgtgatcacacataccatatatttggttaactgaaattttcgagagtggtacaaaagggtgtacacattaagga 13350900  T
Q  354 tgtctacc 361  Q
    ||||||||    
T  13350899 tgtctacc 13350892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 351
Target Start/End: Original strand, 2570006 - 2570102
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaag 351  Q
    |||||||||||||||| || ||||||| |||| || || ||||| ||||||||| ||| ||||||||||||| | |||||| || |||||||||||||    
T  2570006 aaatagtggtcacgcaactcaaaaaatatggtaacacaaaccatatacttggttaacttaaattttccagagcggtacaaa-gggtgtacacattaag 2570102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 13350894 - 13350979
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt 153  Q
    |||||| | ||||||| |||| |||||| ||||||| |  ||||||||||||||||||||||||| ||||||||| ||| ||||||    
T  13350894 tagacatccttaatgtgtacacccttttgtaccactctcgaaaatttcagttaaccaaatatatggtatgtgtgatcacgtttttt 13350979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 359
Target Start/End: Complemental strand, 29677096 - 29676992
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    |||||||||||| ||| || ||||||||||||||| ||| |||| || |||||| ||| ||||||| || |||| |||||| ||| ||||||||||| ||    
T  29677096 aaatagtggtcatgcaact-aaaaaatgtggtcacacaggccatatatttggttaactaaaatttttcaaagtgctacaaagggacgtacacattaaagg 29676998  T
Q  354 tgtcta 359  Q
    ||||||    
T  29676997 tgtcta 29676992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 58 - 148
Target Start/End: Complemental strand, 13351098 - 13351008
Alignment:
Q  58 caatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacat 148  Q
    ||||||| |||||||| ||||||||| |||| || ||| ||||||| | |||||||| | ||||||||||||||| | | |||||||||||    
T  13351098 caatgatagctagacatctttaatgtgtacacccctttgtaccactctgaaaaatttaacttaaccaaatatatggtctttgtgaccacat 13351008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 92 - 180
Target Start/End: Complemental strand, 9929951 - 9929862
Alignment:
Q  92 ttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttccagaa 180  Q
    |||| ||||| ||| |||||||||| ||||| ||||||||| | |||||||||||||||||| | ||||||||||| ||| ||| |||||    
T  9929951 ttttgtaccattttgaaaaatttcaattaactaaatatatggtctgtgtgaccacattttttcatttgcgtgaccactattttttcagaa 9929862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 5855201 - 5855309
Alignment:
Q  253 taaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagg 352  Q
    ||||||||||||||||| || |  |||||||||||| || ||||| || |||||| ||| ||||||| ||||||| |||||| |  |||||| ||||  |    
T  5855201 taaatagtggtcacgcaactaactaaatgtggtcacacataccatatatttggttaacttaaatttttcagagtggtacaaaagagtgtacatattagtg 5855300  T
Q  353 gtgtctacc 361  Q
    |||||||||    
T  5855301 gtgtctacc 5855309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 38244863 - 38244791
Alignment:
Q  109 aaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcgtgaccattatgtttccagaa 180  Q
    |||||| ||||| ||||||||||| | |||||||||||||||||| ||||||||||||| ||| ||| |||||    
T  38244863 aaatttaagttagccaaatatatggtctgtgtgaccacattttttcagttgcgtgaccactatcttttcagaa 38244791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 517571 - 517512
Alignment:
Q  107 aaaaatttcagttaaccaaatatatgatatgtgtgaccacattttttagttgcgtgacca 166  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||| | |||||| ||||    
T  517571 aaaaatttaagttaaccaaatatatgatatgtgcaaccacatttttcaattgcgtaacca 517512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 5855018 - 5855116
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacat-tttttagttgcgtgacca 166  Q
    |||||||  ||||||| ||||||| ||| ||| |||| |||| ||||||| |||||||||||||| | ||||||||||||| |||| ||||| |||||||    
T  5855018 tagacacgcttaatgtttacatccctttgtactacttgaaaa-atttcagctaaccaaatatatggtctgtgtgaccacatattttcagttgtgtgacca 5855116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 154
Target Start/End: Complemental strand, 28499722 - 28499643
Alignment:
Q  75 ctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttta 154  Q
    |||||| || |||||| |||| ||||| | |||||||||||||||||||||||||||| |  |  |||||||||||||||    
T  28499722 ctttaacgtgtacatcattttgtaccattctaaaaaatttcagttaaccaaatatatggtccggatgaccacatttttta 28499643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 2995924 - 2995997
Alignment:
Q  79 aatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt 153  Q
    ||||| ||||||||||| ||||||||| ||||| || | |||| |||||||||| | ||||||||||||||||||    
T  2995924 aatgtgtacatccttttgtaccactttgaaaaaatttaattaatcaaatatatggt-tgtgtgaccacatttttt 2995997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 9929870 - 9929988
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatac-aaatggatgtacacattaagg 352  Q
    ||||||||||||||||  ||||||||||||||||| |||||||| || || ||| | ||||||||| || | || ||| |||   |||| |||||||||     
T  9929870 aaatagtggtcacgcaaatgaaaaaatgtggtcacacagaccatatatttagttaattgaaatttttcaaaatggtacaaaaaaaatgtgcacattaaga 9929969  T
Q  353 gtgtctaccaatctttatt 371  Q
    ||||| ||| |||||||||    
T  9929970 gtgtcaacctatctttatt 9929988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 17227288 - 17227346
Alignment:
Q  122 ccaaatatatgatatgtgtgaccacattttttagttgcgtgaccattatgtttccagaa 180  Q
    ||||||||||| ||||||||||||||||||| || |||||||||| ||| ||| |||||    
T  17227288 ccaaatatatggtatgtgtgaccacatttttaaggtgcgtgaccactattttttcagaa 17227346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 34490091 - 34490184
Alignment:
Q  59 aatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt 153  Q
    |||||||| |||||||| ||||||| || ||| |||  ||||||| |  ||||||||||||||| ||||||||| | ||||||| ||||||||||    
T  34490091 aatgattggtagacacccttaatgtgtatatcttttggtaccactatgtaaaatttcagttaactaaatatatggtctgtgtga-cacatttttt 34490184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 318
Target Start/End: Original strand, 38244801 - 38244863
Alignment:
Q  256 atagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattt 318  Q
    |||||||||||||| |||||||||||||||||| |||||||| || |||| | ||| ||||||    
T  38244801 atagtggtcacgcaactgaaaaaatgtggtcacacagaccatatatttggctaacttaaattt 38244863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 153
Target Start/End: Original strand, 9468064 - 9468105
Alignment:
Q  112 tttcagttaaccaaatatatgatatgtgtgaccacatttttt 153  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  9468064 tttcagttaaccaaatatatggtatgtgtgaccatatttttt 9468105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 358
Target Start/End: Complemental strand, 34941761 - 34941712
Alignment:
Q  309 actgaaattttccagagtgatacaaatggatgtacacattaagggtgtct 358  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||| |||||    
T  34941761 actgaaatttttcagagtggtacaaagggatgtacacattaaggatgtct 34941712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 297
Target Start/End: Complemental strand, 24708123 - 24708080
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccat 297  Q
    |||||||||||||||| || ||||||||||||||| ||||||||    
T  24708123 aaatagtggtcacgcaccttaaaaaatgtggtcacacagaccat 24708080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 297
Target Start/End: Complemental strand, 17227548 - 17227506
Alignment:
Q  255 aatagtggtcacgcagctgaaaaaatgtggtcacgcagaccat 297  Q
    ||||||||||||||| || ||||||||||||||| ||||||||    
T  17227548 aatagtggtcacgcaccttaaaaaatgtggtcacacagaccat 17227506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 2569904 - 2569979
Alignment:
Q  105 taaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt---agttgcgtgaccattatgtttcca 177  Q
    |||||| |||| |||||||||||||||| | |||||||| |||||||||   | ||||||||||| ||| ||||||    
T  2569904 taaaaattttcggttaaccaaatatatggtctgtgtgactacattttttttcaattgcgtgaccactatttttcca 2569979  T

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Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 359
Target Start/End: Original strand, 38952005 - 38952110
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    |||||||||||| ||| || ||||||| |||||||  | |||||  | || ||| ||||||||||| ||||||||||||||  | |||| || ||||||     
T  38952005 aaatagtggtcaagcaactaaaaaaatatggtcacatataccatacattttgttaactgaaatttttcagagtgatacaaagaggtgtatactttaaggt 38952104  T
Q  354 tgtcta 359  Q
    ||||||    
T  38952105 tgtcta 38952110  T

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Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 359
Target Start/End: Original strand, 13351008 - 13351088
Alignment:
Q  279 atgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtcta 359  Q
    ||||||||||  ||||||| || |||||| | | ||||||| ||||||| |||||| || |||||||||||| | ||||||    
T  13351008 atgtggtcacaaagaccatatatttggttaagttaaatttttcagagtggtacaaaggggtgtacacattaaagatgtcta 13351088  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 374
Target Start/End: Original strand, 29678696 - 29678724
Alignment:
Q  346 attaagggtgtctaccaatctttattcat 374  Q
    |||||||||||||||||||||||||||||    
T  29678696 attaagggtgtctaccaatctttattcat 29678724  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 42604120 - 42604184
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatg 132  Q
    |||||| | ||||||| |||| || ||| ||||| |||||||||||||| |||||||||| ||||    
T  42604120 tagacaaccttaatgtgtacacccatttgtaccattttaaaaaatttcaattaaccaaatgtatg 42604184  T

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Target: scaffold0251 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 163 - 371
Target Start/End: Original strand, 10617 - 10825
Alignment:
Q  163 accattatgtttccagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtgg 262  Q
    |||||||| |||  |||||||||||||||||||||||| ||||||| |||||||    ||||||||||||||||||||||||| |  || ||||||||||    
T  10617 accattattttttgagaatttatttggttaactaagtggaaaaataatggtcacgggtattttagttgcgtgaccacattttttattttttaaatagtgg 10716  T
Q  263 tcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaagggtgtctacca 362  Q
    ||| ||| || ||||||| | |||||  ||||||| || |||||| | |||||||||| |||||| |||||| | ||||||| ||||||| ||| ||||     
T  10717 tcatgcaacttaaaaaatatagtcacctagaccatatatttggttaattgaaattttctagagtggtacaaaggaatgtacatattaaggatgtttacct 10816  T
Q  363 atctttatt 371  Q
    |||||||||    
T  10817 atctttatt 10825  T

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Target: scaffold0126 (Bit Score: 76; Significance: 6e-35; HSPs: 3)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 230 - 372
Target Start/End: Original strand, 21549 - 21689
Alignment:
Q  230 gcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgat 329  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||| || | |||| ||||| |||||| | ||||      
T  21549 gcgtgaccacatttttcagcttctatatagtggtcacgcaactgaaaaaatgtggtcacacagaccatatattcggttaactgagattttctaaagtggc 21648  T
Q  330 acaaatggatgtacacattaagggtgtctaccaatctttattc 372  Q
    ||||| |  |||||||||||| |||||||||||||||||||||    
T  21649 acaaacg--tgtacacattaaaggtgtctaccaatctttattc 21689  T

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Target: scaffold0126; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 21424 - 21545
Alignment:
Q  68 tagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacat-tttttagttgcgtgacca 166  Q
    ||||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||||||| | | ||||| | || || |||| |||||||||||||    
T  21424 tagacacttttaatgtgtacatccatttataccattttaaaaaatttcagttaaccaaatatacggtctgtgtaagcatatattttaagttgcgtgacca 21523  T
Q  167 ttatgtttccagaatttatttg 188  Q
    |||| |||||||||||||||||    
T  21524 ttatttttccagaatttatttg 21545  T

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Target: scaffold0126; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 166
Target Start/End: Complemental strand, 21682 - 21579
Alignment:
Q  62 gattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttttt-agttgcg 160  Q
    ||||| |||||||||||||||| ||||  | ||| | |||||||| ||||| |||||||||| |||||||| | |||||||||||||||||| |||||||    
T  21682 gattggtagacacctttaatgtgtaca--cgtttgtgccactttagaaaatctcagttaaccgaatatatggtctgtgtgaccacattttttcagttgcg 21585  T
Q  161 tgacca 166  Q
    ||||||    
T  21584 tgacca 21579  T

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Target: scaffold0123 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 176 - 368
Target Start/End: Original strand, 24036 - 24234
Alignment:
Q  176 cagaatttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcagctgaa 275  Q
    ||||||||||||||| || |||||| ||||||||||||||| | ||||||| | |||| ||||||||||| ||||||||||||||||||| ||| |||||    
T  24036 cagaatttatttggtaaaataagtggaaaaatagtggtcacgcgcattttaat-gcgtaaccacattttttagcttctaaatagtggtcatgcaactgaa 24134  T
Q  276 aaaatgtggtcacgcagac--catgtacttggttgactgaaattttccagagtgatacaaat-----ggatgtacacattaagggtgtctaccaatcttt 368  Q
    ||||||| |||||  ||||  ||| || | |||| ||||||||||| |||| ||||||||||     || |||  |||||||||||||||||||||||||    
T  24135 aaaatgtagtcacatagacgacatatattcggttcactgaaatttttcagattgatacaaattaaaggggtgtttacattaagggtgtctaccaatcttt 24234  T

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Target: scaffold0043 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 87112 - 87035
Alignment:
Q  180 atttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaat 257  Q
    ||||||||||||||||||||  |||||||||||||||    |||||||||||||||||||||||||||| ||||||||    
T  87112 atttatttggttaactaagtagaaaaatagtggtcacgtgtattttagttgcgtgaccacatttttcagtttctaaat 87035  T

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Target: scaffold0043; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 372
Target Start/End: Complemental strand, 86991 - 86873
Alignment:
Q  254 aaatagtggtcacgcagctgaaaaaatgtggtcacgcagaccatgtacttggttgactgaaattttccagagtgatacaaatggatgtacacattaaggg 353  Q
    ||||||||||||| || | |||||||||||||||| || || || || ||| || | |||| ||||| ||| || || ||| || |||||||||||||      
T  86991 aaatagtggtcacacaaccgaaaaaatgtggtcacacaaactatatatttgattaattgaagttttctagaatggtagaaaggggtgtacacattaagaa 86892  T
Q  354 tgtctaccaatctttattc 372  Q
    ||| |||||||| ||||||    
T  86891 tgtttaccaatcattattc 86873  T

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Target: scaffold0024 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 112235 - 112158
Alignment:
Q  180 atttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaat 257  Q
    |||||||| |||||||||||| |||||||||||||||   ||||||| |||||||||||| |||||||||||||||||    
T  112235 atttatttagttaactaagtggaaaaatagtggtcacgtgcattttaattgcgtgaccacgtttttcagcttctaaat 112158  T

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Target: scaffold0291 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 5947 - 5870
Alignment:
Q  180 atttatttggttaactaagtgaaaaaatagtggtcacactcattttagttgcgtgaccacatttttcagcttctaaat 257  Q
    |||||||||||||| |||||| ||||||||||||||| |  ||||||||||||  |||||| |||||||||| |||||    
T  5947 atttatttggttaattaagtgcaaaaatagtggtcacgcgtattttagttgcgacaccacacttttcagcttttaaat 5870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 24800 - 24738
Alignment:
Q  105 taaaaaatttcagttaaccaaatatatgatatgtgtgaccacatttt-ttagttgcgtgacca 166  Q
    ||||||| |||||||| ||||||||||| | | |||||||||||||| | |||||||||||||    
T  24800 taaaaaaattcagttagccaaatatatggtctatgtgaccacattttataagttgcgtgacca 24738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 49409 - 49492
Alignment:
Q  58 caatgattgctagacacctttaatgtctacatccttttataccactttaaaaaatttcagttaaccaaatatatgatatgtgtga 142  Q
    ||||||| | |||||||| ||||| |||||| | | ||||| || | | |||||||| ||||||||||||||||| |||||||||    
T  49409 caatgataggtagacacccttaatttctaca-cgtcttatatcattctgaaaaatttaagttaaccaaatatatggtatgtgtga 49492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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