View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14229_low_21 (Length: 409)
Name: NF14229_low_21
Description: NF14229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14229_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 7 - 399
Target Start/End: Original strand, 39994304 - 39994696
Alignment:
| Q |
7 |
aatttatcaatctaatcacaaattgtnnnnnnnnttctcagaactgaaacattacctcatcggaagaagataaacgattcttcacaacgtaaaacaaacc |
106 |
Q |
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| T |
39994304 |
aatttatcaatctaatcacgaattgtaaaaaaaattctcagaactgaaacattacctcatcggaagaagataaacgattcttcacaacgtaacacaaacc |
39994403 |
T |
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| Q |
107 |
aatcttatcactcagagtatcagatttgcgcgaagacaaagacgaattcgaaatggcgtagaaattagcgagttgaagtagcgactgaaatgaaaacacg |
206 |
Q |
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| T |
39994404 |
gatcttatcactgagagtatcagatttgcgcgaagacaaagacgaattcgaaatggcgtagaaattagcgagttgaagtagcgactgaattgaaaacacg |
39994503 |
T |
|
| Q |
207 |
aagaaacaacgagaaatcgacgatcgattaggaatgatgaaattgtccggtgcttcaatgaatagagattgagatttagggatgaagctgtgtgtacctg |
306 |
Q |
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| T |
39994504 |
aagaaacaacgagaaatcgacgatcgattaggaatgatgaaattgtgcggtgcttcaatgaatagagattgagatttagggatgaagctgtgtgtacctg |
39994603 |
T |
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| Q |
307 |
ctttaggtctcctagcaatggcggtgccaaggttcggagatcgaggacgaaacacagttgaaccattttcgtctccaacgatctctctctctg |
399 |
Q |
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| T |
39994604 |
ctttaggtctcctagcaatggcggtgccaaggttcggagatcgagaacgaaacacagttgaaccattttcgtctccaacgatctctctctctg |
39994696 |
T |
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