View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1422R-Insertion-1 (Length: 1095)

Name: NF1422R-Insertion-1
Description: NF1422R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1422R-Insertion-1
NF1422R-Insertion-1
[»] chr7 (72 HSPs)
chr7 (9-867)||(35068891-35069735)
chr7 (245-481)||(35109352-35109592)
chr7 (647-912)||(25944474-25944738)
chr7 (252-425)||(35077211-35077388)
chr7 (722-918)||(18102502-18102698)
chr7 (722-918)||(25737619-25737814)
chr7 (722-918)||(14805843-14806037)
chr7 (722-918)||(15252837-15253031)
chr7 (720-918)||(6191013-6191213)
chr7 (648-918)||(4910627-4910894)
chr7 (722-918)||(35923225-35923419)
chr7 (646-918)||(22631984-22632257)
chr7 (722-918)||(45485926-45486123)
chr7 (725-918)||(46760249-46760442)
chr7 (722-918)||(19912761-19912956)
chr7 (649-856)||(9157990-9158195)
chr7 (649-855)||(20123735-20123940)
chr7 (933-1059)||(35068717-35068849)
chr7 (309-386)||(35095772-35095849)
chr7 (37-147)||(35095856-35095968)
chr7 (729-848)||(47557663-47557781)
chr7 (952-1050)||(35109095-35109199)
chr7 (746-918)||(47779600-47779772)
chr7 (789-918)||(12632336-12632465)
chr7 (741-848)||(2610630-2610737)
chr7 (722-784)||(12633113-12633174)
chr7 (646-711)||(47778669-47778734)
chr7 (646-918)||(16917368-16917639)
chr7 (741-912)||(14574555-14574726)
chr7 (762-859)||(35888020-35888117)
chr7 (741-912)||(15995710-15995882)
chr7 (485-528)||(35109249-35109292)
chr7 (747-841)||(27810804-27810898)
chr7 (759-859)||(31769013-31769113)
chr7 (759-860)||(39170543-39170644)
chr7 (741-841)||(44682869-44682968)
chr7 (759-852)||(48413730-48413820)
chr7 (651-841)||(4237784-4237969)
chr7 (646-711)||(15995611-15995676)
chr7 (648-693)||(18102459-18102504)
chr7 (759-852)||(24151640-24151732)
chr7 (796-856)||(4069049-4069109)
chr7 (648-692)||(47557933-47557977)
chr7 (741-867)||(11780009-11780135)
chr7 (759-862)||(33153043-33153146)
chr7 (759-862)||(38260325-38260428)
chr7 (646-692)||(18800919-18800965)
chr7 (646-711)||(14574449-14574514)
chr7 (648-693)||(14805800-14805845)
chr7 (648-693)||(15252794-15252839)
chr7 (649-702)||(24151767-24151820)
chr7 (783-851)||(8015732-8015800)
chr7 (646-698)||(36576330-36576382)
chr7 (722-785)||(4068948-4069010)
chr7 (759-862)||(30082357-30082460)
chr7 (759-862)||(34808223-34808326)
chr7 (759-862)||(35084108-35084211)
chr7 (875-918)||(37767011-37767054)
chr7 (649-708)||(44877792-44877850)
chr7 (649-692)||(46760444-46760487)
chr7 (884-918)||(2633329-2633363)
chr7 (822-860)||(10248600-10248638)
chr7 (646-692)||(30082276-30082322)
chr7 (646-692)||(44600358-44600404)
chr7 (648-693)||(16562678-16562723)
chr7 (722-779)||(16562721-16562778)
chr7 (722-779)||(16602884-16602941)
chr7 (648-693)||(16602939-16602984)
chr7 (884-913)||(19492390-19492419)
chr7 (648-693)||(25737812-25737857)
chr7 (651-711)||(31280597-31280658)
chr7 (648-693)||(45485883-45485928)
[»] chr5 (64 HSPs)
chr5 (646-918)||(42273546-42273815)
chr5 (722-918)||(6686356-6686553)
chr5 (646-918)||(20643911-20644182)
chr5 (646-917)||(34425227-34425497)
chr5 (647-867)||(32110900-32111120)
chr5 (722-918)||(37562754-37562950)
chr5 (722-867)||(11261927-11262072)
chr5 (648-918)||(25840762-25841032)
chr5 (722-918)||(43589955-43590150)
chr5 (646-855)||(32017603-32017808)
chr5 (646-918)||(20038999-20039270)
chr5 (647-911)||(38130113-38130379)
chr5 (647-855)||(8225361-8225567)
chr5 (722-908)||(37522592-37522778)
chr5 (741-859)||(38280838-38280956)
chr5 (646-842)||(9957488-9957680)
chr5 (646-784)||(12730107-12730251)
chr5 (747-914)||(19413138-19413305)
chr5 (647-852)||(39505292-39505495)
chr5 (741-852)||(43454382-43454493)
chr5 (650-864)||(104261-104480)
chr5 (746-918)||(17351384-17351556)
chr5 (661-842)||(4463271-4463452)
chr5 (671-814)||(5984212-5984358)
chr5 (759-852)||(42104307-42104400)
chr5 (759-852)||(10153987-10154080)
chr5 (646-711)||(12793006-12793071)
chr5 (759-859)||(12912346-12912446)
chr5 (726-783)||(12792929-12792987)
chr5 (759-859)||(3463867-3463967)
chr5 (646-705)||(17351277-17351337)
chr5 (789-918)||(23233450-23233579)
chr5 (789-852)||(5369090-5369153)
chr5 (725-803)||(445997-446075)
chr5 (743-867)||(41625554-41625678)
chr5 (722-777)||(842698-842754)
chr5 (746-854)||(7071234-7071342)
chr5 (652-711)||(38280748-38280807)
chr5 (754-864)||(2002180-2002290)
chr5 (789-859)||(6391908-6391978)
chr5 (741-831)||(11858311-11858401)
chr5 (648-693)||(842752-842797)
chr5 (646-711)||(7071135-7071200)
chr5 (759-860)||(8146064-8146165)
chr5 (822-859)||(8959712-8959749)
chr5 (648-693)||(11262070-11262115)
chr5 (646-711)||(16153525-16153590)
chr5 (648-693)||(37522776-37522821)
chr5 (648-693)||(37562948-37562993)
chr5 (789-849)||(12792839-12792898)
chr5 (647-699)||(25962643-25962695)
chr5 (759-851)||(31690680-31690772)
chr5 (646-698)||(35462910-35462962)
chr5 (759-862)||(24439579-24439682)
chr5 (822-860)||(8506503-8506541)
chr5 (646-711)||(11857957-11858023)
chr5 (646-692)||(16286281-16286327)
chr5 (742-780)||(23233391-23233429)
chr5 (759-848)||(28907077-28907167)
chr5 (759-848)||(28943472-28943562)
chr5 (648-693)||(6686313-6686358)
chr5 (796-849)||(12729937-12729989)
chr5 (649-710)||(19413040-19413101)
chr5 (648-693)||(43590148-43590193)
[»] chr3 (92 HSPs)
chr3 (647-918)||(50650989-50651259)
chr3 (647-912)||(37074860-37075126)
chr3 (646-918)||(35963050-35963324)
chr3 (722-918)||(37042369-37042564)
chr3 (646-918)||(14752160-14752431)
chr3 (722-918)||(47864167-47864363)
chr3 (646-918)||(7866435-7866706)
chr3 (646-918)||(28875307-28875578)
chr3 (722-912)||(23311551-23311740)
chr3 (646-867)||(6437980-6438205)
chr3 (722-912)||(11054269-11054455)
chr3 (646-918)||(2927189-2927462)
chr3 (741-918)||(54464848-54465024)
chr3 (723-918)||(36546520-36546714)
chr3 (723-918)||(36561601-36561795)
chr3 (741-867)||(579140-579267)
chr3 (646-918)||(6074983-6075253)
chr3 (647-918)||(46711610-46711881)
chr3 (725-918)||(50782573-50782766)
chr3 (722-918)||(30189546-30189743)
chr3 (734-918)||(50730097-50730281)
chr3 (646-917)||(19463975-19464248)
chr3 (666-918)||(29235114-29235359)
chr3 (746-867)||(3972275-3972396)
chr3 (746-867)||(3997482-3997603)
chr3 (734-867)||(53270221-53270357)
chr3 (742-918)||(8703105-8703277)
chr3 (742-918)||(9054992-9055164)
chr3 (646-850)||(32619850-32620050)
chr3 (745-912)||(26724949-26725116)
chr3 (649-840)||(6752571-6752764)
chr3 (655-803)||(9263916-9264065)
chr3 (747-852)||(20847286-20847391)
chr3 (646-815)||(33974614-33974782)
chr3 (759-858)||(34194895-34194994)
chr3 (741-918)||(41476287-41476458)
chr3 (759-860)||(8097028-8097129)
chr3 (759-860)||(30454735-30454835)
chr3 (751-852)||(34722623-34722724)
chr3 (652-842)||(47866941-47867132)
chr3 (762-862)||(7886625-7886725)
chr3 (805-918)||(9264610-9264723)
chr3 (722-918)||(23910465-23910642)
chr3 (763-860)||(16032997-16033094)
chr3 (646-711)||(31836854-31836918)
chr3 (735-800)||(48802550-48802615)
chr3 (759-859)||(10014276-10014376)
chr3 (759-859)||(21214248-21214348)
chr3 (759-859)||(22456019-22456119)
chr3 (759-859)||(22479065-22479165)
chr3 (647-711)||(22479193-22479257)
chr3 (741-918)||(26208009-26208186)
chr3 (646-834)||(46557237-46557425)
chr3 (648-711)||(2994557-2994620)
chr3 (646-709)||(8764821-8764884)
chr3 (759-862)||(23209288-23209391)
chr3 (789-852)||(46918231-46918294)
chr3 (648-693)||(11054453-11054498)
chr3 (796-918)||(31836969-31837091)
chr3 (646-711)||(54465049-54465114)
chr3 (759-859)||(10114918-10115018)
chr3 (759-859)||(10252018-10252118)
chr3 (759-859)||(38401387-38401487)
chr3 (646-709)||(8769722-8769784)
chr3 (648-690)||(36546476-36546518)
chr3 (648-690)||(36561797-36561839)
chr3 (661-711)||(51311587-51311637)
chr3 (646-711)||(22456147-22456212)
chr3 (648-693)||(23311738-23311783)
chr3 (759-860)||(31126218-31126319)
chr3 (646-711)||(38401294-38401359)
chr3 (746-835)||(38674870-38674959)
chr3 (646-711)||(41476487-41476551)
chr3 (826-862)||(17587779-17587815)
chr3 (822-918)||(33973518-33973615)
chr3 (759-862)||(53020189-53020292)
chr3 (759-852)||(54725628-54725714)
chr3 (653-711)||(3972174-3972232)
chr3 (653-711)||(3997646-3997704)
chr3 (655-705)||(50730016-50730066)
chr3 (655-705)||(50782786-50782836)
chr3 (650-711)||(8703016-8703076)
chr3 (650-711)||(9054903-9054963)
chr3 (649-698)||(16739309-16739358)
chr3 (646-711)||(21214155-21214220)
chr3 (759-860)||(21654251-21654352)
chr3 (648-693)||(23910640-23910685)
chr3 (751-784)||(34722564-34722597)
chr3 (646-699)||(45347821-45347874)
chr3 (646-699)||(45781311-45781364)
chr3 (646-711)||(49583879-49583944)
chr3 (759-808)||(55400744-55400793)
[»] chr1 (88 HSPs)
chr1 (646-918)||(15959633-15959904)
chr1 (646-918)||(28016739-28017008)
chr1 (722-918)||(32623998-32624194)
chr1 (646-918)||(33369450-33369718)
chr1 (646-918)||(6786734-6787006)
chr1 (722-918)||(39555579-39555774)
chr1 (646-917)||(6785353-6785622)
chr1 (722-867)||(12449010-12449155)
chr1 (646-912)||(1820312-1820577)
chr1 (646-859)||(16854032-16854249)
chr1 (666-918)||(45226054-45226306)
chr1 (735-918)||(2126023-2126206)
chr1 (725-912)||(42965815-42965998)
chr1 (646-912)||(7467961-7468217)
chr1 (736-918)||(40718664-40718846)
chr1 (722-918)||(24190443-24190637)
chr1 (741-918)||(32983165-32983340)
chr1 (647-856)||(33431458-33431665)
chr1 (646-914)||(46542878-46543146)
chr1 (722-918)||(35691364-35691560)
chr1 (722-918)||(43667296-43667488)
chr1 (646-856)||(47600094-47600304)
chr1 (669-849)||(10558818-10558998)
chr1 (646-867)||(2246057-2246277)
chr1 (741-852)||(39932631-39932742)
chr1 (741-918)||(3875012-3875191)
chr1 (741-867)||(47014534-47014660)
chr1 (646-918)||(44148829-44149096)
chr1 (741-918)||(13136547-13136720)
chr1 (741-849)||(28120817-28120925)
chr1 (646-851)||(6787050-6787255)
chr1 (746-918)||(24728619-24728792)
chr1 (720-859)||(46818554-46818695)
chr1 (745-859)||(50369953-50370070)
chr1 (746-852)||(3076291-3076397)
chr1 (759-860)||(5858422-5858523)
chr1 (741-918)||(1034849-1035023)
chr1 (762-849)||(7876004-7876091)
chr1 (741-852)||(37735442-37735553)
chr1 (646-711)||(4672796-4672861)
chr1 (741-845)||(50012582-50012685)
chr1 (649-711)||(11240945-11241007)
chr1 (741-867)||(25391675-25391799)
chr1 (796-918)||(11241073-11241195)
chr1 (759-860)||(37538818-37538919)
chr1 (647-711)||(47026392-47026456)
chr1 (761-856)||(13351691-13351786)
chr1 (741-852)||(23392225-23392335)
chr1 (759-849)||(41063750-41063840)
chr1 (646-711)||(298866-298931)
chr1 (759-860)||(5950448-5950549)
chr1 (790-859)||(16688176-16688245)
chr1 (759-859)||(25185356-25185456)
chr1 (768-914)||(298665-298812)
chr1 (720-907)||(3861699-3861883)
chr1 (759-860)||(8889748-8889842)
chr1 (746-893)||(43765290-43765438)
chr1 (657-711)||(3875222-3875276)
chr1 (648-693)||(12449153-12449198)
chr1 (759-860)||(15912207-15912308)
chr1 (648-693)||(32624192-32624237)
chr1 (648-693)||(39555772-39555817)
chr1 (759-859)||(7397715-7397815)
chr1 (796-867)||(30221771-30221843)
chr1 (796-852)||(32318619-32318675)
chr1 (725-852)||(47302965-47303092)
chr1 (805-859)||(35366255-35366309)
chr1 (648-693)||(43667486-43667531)
chr1 (647-711)||(3076193-3076257)
chr1 (646-698)||(29488661-29488713)
chr1 (759-859)||(44510271-44510371)
chr1 (647-702)||(7397624-7397679)
chr1 (764-830)||(14086966-14087030)
chr1 (772-859)||(30701437-30701524)
chr1 (796-859)||(50176568-50176631)
chr1 (796-859)||(51338949-51339012)
chr1 (759-848)||(16661524-16661614)
chr1 (649-711)||(37735589-37735651)
chr1 (759-841)||(42724103-42724185)
chr1 (649-711)||(43765204-43765265)
chr1 (648-693)||(2125967-2126012)
chr1 (646-702)||(5858560-5858617)
chr1 (646-711)||(23392363-23392428)
chr1 (646-711)||(24728826-24728891)
chr1 (646-699)||(40935807-40935860)
chr1 (646-699)||(40960668-40960721)
chr1 (646-711)||(47014691-47014756)
chr1 (646-699)||(49924332-49924385)
[»] chr2 (61 HSPs)
chr2 (646-918)||(45660259-45660536)
chr2 (646-867)||(33198673-33198898)
chr2 (646-918)||(19263996-19264268)
chr2 (722-918)||(45085230-45085425)
chr2 (722-918)||(6110191-6110388)
chr2 (646-911)||(28858206-28858473)
chr2 (722-912)||(28599146-28599336)
chr2 (646-867)||(14873857-14874081)
chr2 (735-918)||(3201311-3201494)
chr2 (651-918)||(11616925-11617192)
chr2 (646-918)||(25571941-25572213)
chr2 (722-918)||(35517095-35517291)
chr2 (722-918)||(41528229-41528425)
chr2 (741-918)||(12938233-12938410)
chr2 (669-918)||(9864710-9864958)
chr2 (646-852)||(29524099-29524304)
chr2 (741-918)||(6765925-6766103)
chr2 (646-912)||(8701498-8701764)
chr2 (744-918)||(24204521-24204695)
chr2 (741-852)||(33677474-33677585)
chr2 (741-852)||(40584456-40584567)
chr2 (646-918)||(35022793-35023066)
chr2 (763-860)||(9709526-9709623)
chr2 (649-711)||(5280679-5280741)
chr2 (745-852)||(5963196-5963302)
chr2 (771-918)||(35115795-35115943)
chr2 (741-832)||(39696877-39696968)
chr2 (649-711)||(40808911-40808973)
chr2 (746-816)||(44454987-44455057)
chr2 (759-852)||(26998326-26998419)
chr2 (646-711)||(38070912-38070977)
chr2 (731-918)||(7645219-7645409)
chr2 (822-918)||(43415473-43415569)
chr2 (741-864)||(30830642-30830765)
chr2 (783-918)||(40808712-40808846)
chr2 (648-693)||(6110386-6110431)
chr2 (646-711)||(18454962-18455027)
chr2 (741-866)||(30421226-30421351)
chr2 (759-859)||(32010111-32010211)
chr2 (759-859)||(32273680-32273780)
chr2 (759-852)||(8032726-8032820)
chr2 (822-859)||(4891690-4891727)
chr2 (822-859)||(16494977-16495014)
chr2 (648-693)||(28599334-28599379)
chr2 (646-699)||(33635249-33635302)
chr2 (648-693)||(41528186-41528231)
chr2 (655-711)||(44454869-44454924)
chr2 (649-693)||(45085188-45085232)
chr2 (759-862)||(18833958-18834061)
chr2 (647-702)||(26998234-26998289)
chr2 (796-859)||(38071041-38071104)
chr2 (648-698)||(18834103-18834153)
chr2 (646-692)||(21539670-21539716)
chr2 (648-693)||(3201265-3201310)
chr2 (759-808)||(29514121-29514170)
chr2 (646-711)||(30752042-30752107)
chr2 (646-711)||(32273587-32273652)
chr2 (875-912)||(33677608-33677645)
chr2 (646-707)||(35115999-35116060)
chr2 (648-693)||(35517052-35517097)
chr2 (674-711)||(39697002-39697039)
[»] chr8 (68 HSPs)
chr8 (646-918)||(34890168-34890439)
chr8 (646-918)||(36190666-36190938)
chr8 (647-918)||(43216341-43216619)
chr8 (722-918)||(7022397-7022592)
chr8 (646-918)||(34158284-34158556)
chr8 (722-918)||(7858499-7858694)
chr8 (646-867)||(13143659-13143880)
chr8 (646-916)||(8107613-8107884)
chr8 (722-914)||(41086384-41086575)
chr8 (725-918)||(26483506-26483698)
chr8 (646-917)||(24892733-24893006)
chr8 (647-867)||(8711772-8711992)
chr8 (650-855)||(28348511-28348713)
chr8 (741-867)||(31734104-31734231)
chr8 (649-841)||(7499623-7499816)
chr8 (735-867)||(15957955-15958090)
chr8 (646-867)||(35525493-35525703)
chr8 (646-918)||(13143939-13144226)
chr8 (647-918)||(29920262-29920535)
chr8 (741-855)||(35456081-35456195)
chr8 (646-918)||(4046887-4047159)
chr8 (746-856)||(2052830-2052938)
chr8 (760-918)||(30575828-30575987)
chr8 (751-843)||(3642039-3642130)
chr8 (649-711)||(30576027-30576089)
chr8 (746-918)||(8709780-8709950)
chr8 (759-859)||(8673388-8673488)
chr8 (759-859)||(26954445-26954545)
chr8 (759-859)||(41362360-41362460)
chr8 (791-862)||(8745622-8745693)
chr8 (736-915)||(15824634-15824807)
chr8 (741-867)||(16879436-16879563)
chr8 (649-711)||(41809003-41809065)
chr8 (759-860)||(17713230-17713331)
chr8 (759-852)||(27819666-27819759)
chr8 (805-918)||(16358106-16358218)
chr8 (789-860)||(5217429-5217500)
chr8 (651-702)||(33563719-33563770)
chr8 (791-918)||(8712563-8712690)
chr8 (759-849)||(25195109-25195199)
chr8 (741-859)||(41755915-41756032)
chr8 (775-852)||(2628224-2628301)
chr8 (648-693)||(7022590-7022635)
chr8 (648-693)||(7858456-7858501)
chr8 (646-699)||(36537974-36538027)
chr8 (759-859)||(4038934-4039034)
chr8 (805-860)||(28497190-28497245)
chr8 (646-711)||(5217306-5217371)
chr8 (649-702)||(38072114-38072167)
chr8 (655-711)||(2052739-2052795)
chr8 (646-698)||(11043973-11044025)
chr8 (759-859)||(17336749-17336849)
chr8 (646-702)||(17713137-17713193)
chr8 (646-698)||(24612673-24612725)
chr8 (646-698)||(27621046-27621098)
chr8 (651-711)||(41755824-41755884)
chr8 (652-711)||(374190-374249)
chr8 (648-699)||(8673298-8673349)
chr8 (876-918)||(2052987-2053029)
chr8 (876-918)||(7756695-7756737)
chr8 (649-699)||(25321778-25321828)
chr8 (648-693)||(41086573-41086619)
chr8 (681-711)||(44664001-44664031)
chr8 (646-711)||(17314744-17314809)
chr8 (759-852)||(29147297-29147390)
chr8 (759-808)||(31133133-31133182)
chr8 (646-702)||(31734008-31734065)
chr8 (759-852)||(39187241-39187334)
[»] chr4 (73 HSPs)
chr4 (646-918)||(4058609-4058881)
chr4 (722-918)||(20281562-20281757)
chr4 (646-918)||(39078052-39078322)
chr4 (722-918)||(2229218-2229413)
chr4 (722-918)||(47867850-47868045)
chr4 (722-918)||(14332730-14332926)
chr4 (730-918)||(26916304-26916491)
chr4 (722-918)||(41414597-41414790)
chr4 (646-912)||(16604838-16605092)
chr4 (741-918)||(20716169-20716346)
chr4 (722-867)||(56318106-56318252)
chr4 (741-918)||(5483264-5483441)
chr4 (741-918)||(29203495-29203672)
chr4 (722-918)||(28668987-28669181)
chr4 (648-840)||(35529568-35529760)
chr4 (655-918)||(10069600-10069863)
chr4 (646-914)||(35310732-35311000)
chr4 (666-918)||(17794527-17794781)
chr4 (646-918)||(48793616-48793883)
chr4 (741-918)||(55580658-55580836)
chr4 (768-918)||(7654633-7654783)
chr4 (752-918)||(24940365-24940531)
chr4 (666-837)||(8683373-8683541)
chr4 (647-835)||(52535654-52535843)
chr4 (741-867)||(1585383-1585510)
chr4 (649-840)||(42915427-42915618)
chr4 (646-840)||(12002704-12002892)
chr4 (721-840)||(25297286-25297405)
chr4 (646-711)||(17186974-17187039)
chr4 (759-859)||(8178284-8178384)
chr4 (646-784)||(32280107-32280245)
chr4 (759-859)||(46070567-46070665)
chr4 (759-859)||(5064700-5064800)
chr4 (646-710)||(55580562-55580625)
chr4 (759-860)||(8013133-8013234)
chr4 (658-711)||(29203414-29203467)
chr4 (759-850)||(23978169-23978260)
chr4 (761-851)||(17799187-17799277)
chr4 (789-859)||(47516236-47516306)
chr4 (648-693)||(2229175-2229220)
chr4 (763-860)||(5841823-5841920)
chr4 (648-693)||(14332687-14332732)
chr4 (741-918)||(14583718-14583895)
chr4 (646-711)||(30245030-30245094)
chr4 (759-859)||(32410335-32410435)
chr4 (725-834)||(50080521-50080630)
chr4 (646-698)||(32012485-32012537)
chr4 (741-914)||(32323252-32323424)
chr4 (759-859)||(49080264-49080364)
chr4 (652-711)||(19351740-19351799)
chr4 (741-852)||(50145725-50145836)
chr4 (759-867)||(5815476-5815585)
chr4 (648-693)||(28669179-28669224)
chr4 (759-852)||(37911891-37911984)
chr4 (648-693)||(41414788-41414833)
chr4 (648-693)||(47867807-47867852)
chr4 (646-699)||(50768355-50768408)
chr4 (646-702)||(8013271-8013327)
chr4 (875-914)||(7438771-7438810)
chr4 (875-918)||(12002619-12002662)
chr4 (790-849)||(17186850-17186909)
chr4 (648-695)||(26916253-26916300)
chr4 (759-850)||(40411108-40411199)
chr4 (646-692)||(29180576-29180622)
chr4 (822-852)||(29511495-29511525)
chr4 (648-698)||(30012111-30012161)
chr4 (818-860)||(53848526-53848568)
chr4 (648-693)||(7654555-7654600)
chr4 (646-711)||(23978288-23978353)
chr4 (759-848)||(28318473-28318562)
chr4 (646-711)||(28318590-28318655)
chr4 (759-808)||(32012396-32012445)
chr4 (646-711)||(37911798-37911863)
[»] scaffold0300 (2 HSPs)
scaffold0300 (722-918)||(566-761)
scaffold0300 (648-693)||(759-804)
[»] chr6 (27 HSPs)
chr6 (722-918)||(21542391-21542586)
chr6 (722-912)||(11082244-11082434)
chr6 (722-914)||(3095717-3095909)
chr6 (722-918)||(35129047-35129243)
chr6 (722-918)||(34177634-34177829)
chr6 (659-914)||(30794189-30794441)
chr6 (741-918)||(12461422-12461599)
chr6 (646-918)||(7274868-7275141)
chr6 (736-867)||(31107177-31107308)
chr6 (741-816)||(9428761-9428836)
chr6 (759-859)||(16524387-16524486)
chr6 (759-859)||(3888434-3888534)
chr6 (759-859)||(4031994-4032094)
chr6 (741-837)||(17751818-17751914)
chr6 (760-859)||(16013484-16013583)
chr6 (648-693)||(3095907-3095952)
chr6 (648-693)||(21542348-21542393)
chr6 (759-859)||(4987950-4988050)
chr6 (876-918)||(9428871-9428913)
chr6 (791-852)||(5881811-5881872)
chr6 (759-852)||(21963962-21964055)
chr6 (648-693)||(35129241-35129286)
chr6 (646-702)||(1130433-1130489)
chr6 (822-852)||(5300659-5300689)
chr6 (649-699)||(30949051-30949101)
chr6 (759-808)||(374104-374153)
chr6 (759-808)||(17598298-17598347)
[»] scaffold0132 (2 HSPs)
scaffold0132 (647-918)||(910-1180)
scaffold0132 (647-918)||(8870-9140)
[»] scaffold0045 (2 HSPs)
scaffold0045 (722-918)||(77930-78125)
scaffold0045 (648-693)||(77887-77932)
[»] scaffold0442 (1 HSPs)
scaffold0442 (722-867)||(10018-10163)
[»] scaffold0018 (1 HSPs)
scaffold0018 (722-914)||(154834-155024)
[»] scaffold0774 (2 HSPs)
scaffold0774 (742-855)||(3484-3597)
scaffold0774 (652-693)||(3614-3655)
[»] scaffold0062 (1 HSPs)
scaffold0062 (741-918)||(44764-44941)
[»] scaffold0009 (2 HSPs)
scaffold0009 (649-912)||(157694-157956)
scaffold0009 (741-837)||(52676-52772)
[»] scaffold0111 (1 HSPs)
scaffold0111 (745-849)||(40174-40278)
[»] scaffold0005 (1 HSPs)
scaffold0005 (741-918)||(233480-233657)
[»] scaffold1786 (1 HSPs)
scaffold1786 (646-711)||(762-827)
[»] scaffold0565 (2 HSPs)
scaffold0565 (822-859)||(5927-5964)
scaffold0565 (649-711)||(6053-6114)
[»] scaffold0330 (1 HSPs)
scaffold0330 (759-859)||(3177-3277)
[»] scaffold0010 (1 HSPs)
scaffold0010 (790-860)||(160970-161040)
[»] scaffold0012 (1 HSPs)
scaffold0012 (741-842)||(160241-160342)


Alignment Details
Target: chr7 (Bit Score: 625; Significance: 0; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 625; E-Value: 0
Query Start/End: Original strand, 9 - 867
Target Start/End: Complemental strand, 35069735 - 35068891
Alignment:
Q  9 catgtaacattttcctaagggaaagagttaaggaaaaatatttgtaattaatgcgtatagatattaagctatttgggttgttcctatgatgttgatttaa 108  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  35069735 catgtaacattttcctaagg-aaagagttaaggaaaaatatttgtaattaatgagtatagatattaagctatttgggttgttcctatgatgttgatttaa 35069637  T
Q  109 gattttgaaatgtacccctttctcaagtcttaagtttgattcttttcgatgacaatttcgatgagctggtttgatttctctttagtgttctcacaagact 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  35069636 gattttgaaatgtacccctttctcaagtcttaagtttgattcttttcgatgacaatttcgatgagctggtttgacttctctttagtattctcacaagact 35069537  T
Q  209 atcttcagaagagtaaatatttttatnnnnnnnnnnttatttattaaaattgtattaatgaatgcttttcaactatttccaataaggtttgaactctcac 308  Q
    || ||| |||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35069536 atattcggaagagtaaatatttttataaaaaaaaa-ttatttattaaaattgtattaatgaatgcttttcaactatttccaataaggtttgaactctcac 35069438  T
Q  309 tgaaattacaaaatcttgcccatatcttgtccaattgagggaacatgtggagatatccaaaattaatcaaatgattttatttgtttttgaatttttatct 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  35069437 tgaaattacaaaatcttgcccatatcttgtccaattgagggaacatgtggagatatccaaaattaaacaaatgattttatttgtttttgaatttttatct 35069338  T
Q  409 accatgtctcttttagaagtcataatcaatataataatctaaccaaatatacaatgttttgcatcctcctcccaggcacacatttcttctcttggttgtt 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  35069337 accatgtctcttttagaagtcataatcaatataataatctaaccaaatatacaatgttttgcatcctcctcccatacacacatttcttctcttggttgtt 35069238  T
Q  509 ttgtgttaaatcactatatacaaacattttttaagaatcatactttgatcttgtttgttttgtgttcaatgtaatgaaattttgctttaactaacaacct 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35069237 ttgtgttaaatcactatatacaaacattttttaagaatcatactttgatgttgtttgttttgtgttcaatgtaatgaaattttgctttaactaacaacct 35069138  T
Q  609 actccctccgtctcataaaataag--tnnnnnnnnnnnnctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttg 706  Q
    ||||||||||||||||||||||||                 |||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  35069137 actccctccgtctcataaaataagcaaaaaaaaaaaaaaaacattttttttgtcccaaaatataagtaaaaatgacaaacttttatcctatttaatcttg 35069038  T
Q  707 tttttnnnnnnnntcatcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctat 806  Q
     ||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              ||||||||||    
T  35069037 -ttttaaaaaaaatcatcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaatt--------------ttttctctat 35068953  T
Q  807 aaccaatagctaattaaaattgtttttacatcttcctataaaacttttttc-aagaaaacac 867  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35068952 aaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaaagaaaacac 35068891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 245 - 481
Target Start/End: Complemental strand, 35109592 - 35109352
Alignment:
Q  245 ttatttattaaaattgtattaatgaatgcttttcaactatttccaataaggtttgaactctcactgaaattacaaaatctt-gcccata---tcttgtcc 340  Q
    |||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||| | ||||||||||||||||| |||||||   |||||| |    
T  35109592 ttatttattaaaattgcattaatgaatacttttgaactatttccaataaggtttgaactctgattgaaattacaaaatctttgcccataccatcttgtac 35109493  T
Q  341 aattgagggaacatgtggagatatccaaaattaatcaaatgattttatttgtttttgaatttttatctaccatgtctcttttagaagtcataatcaatat 440  Q
    ||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  35109492 aattgagggaacatgtggcaatctccaaaattaaacaaatgattttatttgtttttgaatttttatctaccatatctcttttagatgtcataatcaatat 35109393  T
Q  441 aataatctaaccaaatatacaatgttttgcatcctcctccc 481  Q
    ||||||| ||||||||||| |||| ||||||||||||||||    
T  35109392 aataatccaaccaaatatataatgctttgcatcctcctccc 35109352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 647 - 912
Target Start/End: Original strand, 25944474 - 25944738
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtt 746  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||        || | ||||||||||      ||||||    
T  25944474 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttatttaatcttgtttttttaaaaaatctt-ttttccaagaaaaacttttgtt 25944572  T
Q  747 tattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctata 846  Q
    ||||||||||| |||||||||||||||||||||||||| || |||||||||||| || ||||||||| || ||| |||||||||||||||||||||||||    
T  25944573 tattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatggccaatgaaaattgtttttacatcttcctata 25944672  T
Q  847 aaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataa 912  Q
    ||||||||| | ||||||||||        |||||| |||||| |||| ||||||||||||||||||    
T  25944673 aaactttttccaaagaaaacacaaaaact-tatactccaaattcttatattttagttttcttaataa 25944738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 252 - 425
Target Start/End: Complemental strand, 35077388 - 35077211
Alignment:
Q  252 ttaaaattgtattaatgaatgcttttcaactatttccaataaggtttgaactctcactgaaattacaaaatctt-gcccatatc---ttgtccaattgag 347  Q
    ||||||||| ||| |||||| ||||| ||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||   |||| ||||||||    
T  35077388 ttaaaattgcattgatgaatacttttgaactatttccaataaggtttgaactctgattgaaattacaaaatctttgcccatatcatcttgtacaattgag 35077289  T
Q  348 ggaacatgtggagatatccaaaattaatcaaatgattttatttgtttttgaatttttatctaccatgtctcttttaga 425  Q
    |||||||| ||  || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35077288 ggaacatgcggcaatctccaaaattaaacaaatgattttatttgtttttgaatttttatctaccatgtctcttttaga 35077211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 18102502 - 18102698
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  | |||||| ||||| || ||||||||| || |||     
T  18102502 atctttttcaagatttttttttgtttattctcataaaattaaatgcaaattacattcaattttcactctctttcattttttccataaccaatggccaatg 18102601  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||        |||||| |||||| ||||||||||||||||||||||| |||||    
T  18102602 aaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaat-tatactccaaattcttatgttttagttttcttaataagtgtga 18102698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 722 - 918
Target Start/End: Complemental strand, 25737814 - 25737619
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| || |||||||||||| |||     
T  25737814 atcttttccaagatttttttttgtt-attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatg 25737716  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||       ||||||  |||||||||||||||||||||||||||||| |||||    
T  25737715 aaaattgtttttacatcttcctataaaactttttccaaagaaaacac-acaaaactataccccaaatttttatgttttagttttcttaataagtgtga 25737619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 14805843 - 14806037
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| || |||||||||||| |||     
T  14805843 atcttttccaagatttttttttgtt-attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatg 14805941  T
Q  822 aaaattgtttttacatcttcctataaaacttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||||||||||||||||||||||||||||  ||||||| ||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  14805942 aaaattgtttttacatcttcctataaaactttttcaaagaaaatac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 14806037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 15252837 - 15253031
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| || |||||||||||| |||     
T  15252837 atcttttccaagatttttttttgtt-attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatg 15252935  T
Q  822 aaaattgtttttacatcttcctataaaacttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||||||||||||||||||||||||||||  ||||||| ||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  15252936 aaaattgtttttacatcttcctataaaactttttcaaagaaaatac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 15253031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 720 - 918
Target Start/End: Original strand, 6191013 - 6191213
Alignment:
Q  720 tcatcttttccaaga--tttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagct 817  Q
    ||||||||||||| |  ||||| ||||||||||||||||| |||||||| |||||||||| |||||| || |||||| |||||||| ||||||||||||     
T  6191013 tcatcttttccaataattttttttttgtttattctcataaaattaaatgaaaattacatttaattttatctctctttcattttctccataaccaatagcc 6191112  T
Q  818 aattaaaattgtttttacatcttcctataaaactttttt-caagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgt 916  Q
    ||| |||||||||||||||||||||||||||||||||||  ||||||||||       ||||||| |||||| ||||||||||||||||||||||| |||    
T  6191113 aatgaaaattgtttttacatcttcctataaaacttttttaaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgt 6191211  T
Q  917 ga 918  Q
    ||    
T  6191212 ga 6191213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 648 - 918
Target Start/End: Complemental strand, 4910894 - 4910627
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgttt 747  Q
    ||||||||||||||||| |||||||||||||  ||||||||||||  |||||||||||||||||        || ||||||||||||      |||||||    
T  4910894 cattttctttgtcccaaaatataagcaaaaagaacaaacttttattatatttaatcttgttttttcaaaaaatc-tcttttccaagaaaaagttttgttt 4910796  T
Q  748 attctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataa 847  Q
    || ||||||| |||||||||||||||||||||||||| || |||||| ||||| || |||| ||||||| ||| |||||| |||||||||||||||||||    
T  4910795 atgctcataaaattaaatgcaaattacattcaattttatctctctttcattttttccataatcaatagccaatgaaaattatttttacatcttcctataa 4910696  T
Q  848 aacttttt-tcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||| | ||||||||||        ||||||||||||| ||||||||||||||| | ||||| |||||    
T  4910695 aactttttctaaagaaaacacaaaaa---tatacttcaaattcttatgttttagttttttaaataagtgtga 4910627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 35923225 - 35923419
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||| ||| |||||| |||||| |||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| || |||||||||||| |||     
T  35923225 atctttttcaatatttttttttgtt-attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatg 35923323  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||||||||||||| |||||||||||||| | ||||||||||       ||||||| |||||||||||||||||||||||||||||| |||||    
T  35923324 aaaattgtttttacatctttctataaaactttttccaaagaaaacac--aaaaactatactccaaatttttatgttttagttttcttaataagtgtga 35923419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 646 - 918
Target Start/End: Original strand, 22631984 - 22632257
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnn-tcatcttttccaagatttttctttg 744  Q
    |||||||||||||| | || ||||||||||||| ||||||||||||| |||||||||||| |||||         ||||||||||||| | |||| ||||    
T  22631984 ctcattttctttgttctaaaatataagcaaaaaggacaaacttttattctatttaatcttatttttaaaaaaatatcatcttttccaataattttttttg 22632083  T
Q  745 tttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttccta 844  Q
     |||||||||| | ||||||||||||||||||| |||||| || |||||  ||||| || |||||||||| | ||| ||||||||||||||||||||| |    
T  22632084 cttattctcatgaaattaaatgcaaattacatttaattttctctctcttccattttttccataaccaatatccaatgaaaattgtttttacatcttccca 22632183  T
Q  845 taaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    | |||||| |||| ||||||||||       |||| || |||| ||||||| ||||||||||||||||| |||||    
T  22632184 tgaaacttatttcaaagaaaacac-aaaaatctatgctacaaacttttatgctttagttttcttaataagtgtga 22632257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 45485926 - 45486123
Alignment:
Q  722 atcttttccaagatttttctttgt-ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaat 820  Q
    |||||||||||  ||||| ||| | |||||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| || |||||||||||| |||    
T  45485926 atcttttccaatttttttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaat 45486025  T
Q  821 taaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
     |||||| ||||||||||||||||||||||||||| | ||||||||||       ||||||| |||||||||||||||||||||||||||||| |||||    
T  45486026 gaaaattatttttacatcttcctataaaactttttccaaagaaaacac-aaaaaactatactccaaatttttatgttttagttttcttaataagtgtga 45486123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 725 - 918
Target Start/End: Complemental strand, 46760442 - 46760249
Alignment:
Q  725 ttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaa 824  Q
    |||| ||| |||||| |||  |||||||||||| ||||||||||||||||||||||| || ||  ||||| ||||| || |||||||||||| ||| |||    
T  46760442 tttttcaatattttttttttgttattctcataaaattaaatgcaaattacattcaatattctctttctttcattttttccataaccaatagccaatgaaa 46760343  T
Q  825 attgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||||||||||||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  46760342 attgtttttacatcttcctataaaacttttttcaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 46760249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 722 - 918
Target Start/End: Complemental strand, 19912956 - 19912761
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| |||||| |||||||| | |||||||||||||||||||||||||| ||  ||||| ||||| || |||||||||| | |||     
T  19912956 atcttttccaagatttttttttgtt-attctcatgaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatg 19912858  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||| || |||||||||||||| | ||||||||||       ||||||| |||||| |||||||||||||||||||||||||||||    
T  19912857 aaaattgtttttacattttactataaaactttttccaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataaatgtga 19912761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 649 - 856
Target Start/End: Original strand, 9157990 - 9158195
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgttta 748  Q
    ||||||||| |||||| |||||| |||||| ||||||||||||| ||||||||||||||||||        || ||||||||||||      ||||||||    
T  9157990 attttctttatcccaaaatataatcaaaaaagacaaacttttattctatttaatcttgtttttaaaaaaaatc-tcttttccaagaaaaacttttgttta 9158088  T
Q  749 ttctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaa 848  Q
    |||| |||| |||||||||||||||||||||| |||||  |||||| ||||| || ||||||||| || ||  |||||||||||||||||||||||||||    
T  9158089 ttcttataaaattaaatgcaaattacattcaaatttttttctctttcattttttc-ataaccaatggccaaagaaaattgtttttacatcttcctataaa 9158187  T
Q  849 actttttt 856  Q
    ||||||||    
T  9158188 actttttt 9158195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 649 - 855
Target Start/End: Complemental strand, 20123940 - 20123735
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgttta 748  Q
    ||||| |||||||||| |||||| |||||| ||||||| ||||||||||||||||||||||||        ||  |||| ||||||      ||||||||    
T  20123940 attttatttgtcccaaaatataatcaaaaaagacaaacgtttatcctatttaatcttgtttttttaaaaaatcg-ctttcccaagaaaaacttttgttta 20123842  T
Q  749 ttctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaa 848  Q
    ||||||||| |||||||||||||||||||||||||| |  |||||| ||||| || |||| ||||||| ||| ||||||||||||||||||| |||||||    
T  20123841 ttctcataaaattaaatgcaaattacattcaattttctttctctttcattttttccataagcaatagccaatgaaaattgtttttacatcttgctataaa 20123742  T
Q  849 acttttt 855  Q
    |||||||    
T  20123741 acttttt 20123735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 933 - 1059
Target Start/End: Complemental strand, 35068849 - 35068717
Alignment:
Q  933 atttaagacggtgggagtattwtgtaagcttgtcg-ttgtgtagtctacataagtccttctcaagacaaaaaccattg--tttgccaaaccactactctc 1029  Q
    |||||||||||| | |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  35068849 atttaagacggtcgaagtattatgtaagcttgtcggttgtgtagtctacataagtccttctcaagacaaaaaccattggttttgccaaaccactactctc 35068750  T
Q  1030 atct--ca-tggtggatcttgttttcctcycta 1059  Q
    ||||  || ||||||||||||||||| || |||    
T  35068749 atcttccattggtggatcttgttttcgtctcta 35068717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 309 - 386
Target Start/End: Complemental strand, 35095849 - 35095772
Alignment:
Q  309 tgaaattacaaaatcttgcccatatcttgtccaattgagggaacatgtggagatatccaaaattaatcaaatgatttt 386  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35095849 tgaaattataaaatcttgcccatatcttgtccaattgagggaacatgtggagatatccaaaattaaacaaatgatttt 35095772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 37 - 147
Target Start/End: Complemental strand, 35095968 - 35095856
Alignment:
Q  37 taaggaaaaatatttgtaattaatgcgtatagatat--taagctatttgggttgttcctatgatgttgatttaagattttgaaatgtacccctttctcaa 134  Q
    ||||||||||||||| |||| ||||| |||||| ||  |||||||||||| |||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  35095968 taaggaaaaatatttttaatcaatgcttatagagatactaagctatttggattgttcttttgatgttgatttaagattttgaagtgtacccctttctcaa 35095869  T
Q  135 gtcttaagtttga 147  Q
    |||||||||||||    
T  35095868 gtcttaagtttga 35095856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 729 - 848
Target Start/End: Complemental strand, 47557781 - 47557663
Alignment:
Q  729 ccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattg 828  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||||||| |||||| |  |||||| ||||| || ||||  |||||| ||| |||||||    
T  47557781 ccaagattttt-tttgtttattctcatagaattaaatgcaaattacatttaattttctttctctttcattttttccataattaatagccaatgaaaattg 47557683  T
Q  829 tttttacatcttcctataaa 848  Q
    ||||||||||||||||||||    
T  47557682 tttttacatcttcctataaa 47557663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 952 - 1050
Target Start/End: Complemental strand, 35109199 - 35109095
Alignment:
Q  952 ttwtgtaagcttgtcg-ttgtgtagtctacataagtccttctcaagacaaaaaccattg--tttgccaaaccactactctcatct--ca-tggtggatct 1045  Q
    || ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||| ||||||||  || ||||||||||    
T  35109199 ttttgtaagcttgtcggttgtgtagtctacataagtccttctcaagacaaaaaccataggttttgccaaaccactagtctcatcttccattggtggatct 35109100  T
Q  1046 tgttt 1050  Q
    |||||    
T  35109099 tgttt 35109095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 746 - 918
Target Start/End: Original strand, 47779600 - 47779772
Alignment:
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||| | ||||||||||||||||||| |||||| ||  ||||||||||| || ||||||| | || ||| ||||||||||||||||||||| ||    
T  47779600 ttattctcatgaaattaaatgcaaattacatttaattttctctttcttttattttttccataaccagttgccaatgaaaattgtttttacatcttcccat 47779699  T
Q  846 aaaactt-ttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
     |||||| || | ||||||||||       |||| || |||||| ||||| ||||||||||||||||| |||||    
T  47779700 gaaacttattctaaagaaaacac-aaaaaactatgctacaaattcttatgctttagttttcttaataagtgtga 47779772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 789 - 918
Target Start/End: Complemental strand, 12632465 - 12632336
Alignment:
Q  789 ctcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaat 887  Q
    |||||||||||| || | | |||||||| ||| |||||||||||||||||||||||| ||||||||||| |||||||||        ||||||| |||||    
T  12632465 ctcttttattttttccacagccaatagccaatgaaaattgtttttacatcttcctatgaaacttttttcaaagaaaaca-taaaaaactatactccaaat 12632367  T
Q  888 ttttatgttttagttttcttaataaatgtga 918  Q
    | |||||||||| ||||||||||||||||||    
T  12632366 tcttatgttttaattttcttaataaatgtga 12632336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 741 - 848
Target Start/End: Complemental strand, 2610737 - 2610630
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||| | ||||| |||||||||||||||||||||   |||||  |||||||| |||||||||||| ||  |||| ||||||||||||||    
T  2610737 tttgtttattctcatgaaattaagtgcaaattacattcaatttttcttctcttccattttctccataaccaatagccaaagaaaaatgtttttacatctt 2610638  T
Q  841 cctataaa 848  Q
     |||||||    
T  2610637 tctataaa 2610630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 722 - 784
Target Start/End: Complemental strand, 12633174 - 12633113
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaatttt 784  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  12633174 atcttttccaagattttt-tttgtttattctcataaaattaaatgcaaattacattcaatttt 12633113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 47778669 - 47778734
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    ||||||||||||||||||| ||||||||||||| |||||| |||||| ||||||||||||||||||    
T  47778669 ctcattttctttgtcccaaaatataagcaaaaaagacaaatttttattctatttaatcttgttttt 47778734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 646 - 918
Target Start/End: Original strand, 16917368 - 16917639
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||| ||||||||||||||| |||||| ||||   | ||||||||||||||||||||||||| |||         ||||||||  |  || ||| |||      
T  16917368 ctcactttctttgtcccaagttataagaaaaataaataaacttttatcctatttaatcttgtctttttaaaaaaccatctttttaattatctttttttac 16917467  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    ||||| |||| | |||||||||||||||| ||||||||| ||  | |   |||||| | ||||||||||| |||| ||||||||||||||||||||| ||    
T  16917468 ttattttcattaaattaaatgcaaattactttcaattttctctatttcccattttcac-ataaccaatagttaatgaaaattgtttttacatcttcccat 16917566  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
     |||||| || | ||||||| ||        |||| ||||||||||||||||||| |||||||||||| |||||    
T  16917567 gaaacttattccaaagaaaaaacaaaatgt-tatatttcaaatttttatgttttaattttcttaataagtgtga 16917639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 741 - 912
Target Start/End: Original strand, 14574555 - 14574726
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    |||| |||||||||||| ||||||||||||||| | ||||||||  | |||||  |||||||  |||||||||||  |||  ||||| ||||||||||||    
T  14574555 tttgcttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaatagacaatggaaattatttttacatctt 14574654  T
Q  841 cctataaaactt-ttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataa 912  Q
    || || |||||| || ||||||||||||       ||||||| |||||| |||| |||| |||||||||||||    
T  14574655 cccatgaaacttattatcaagaaaacac-aaaaaactatactccaaattcttatattttggttttcttaataa 14574726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 762 - 859
Target Start/End: Complemental strand, 35888117 - 35888020
Alignment:
Q  762 aaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaa 859  Q
    ||||||||| | ||||||||||  || || ||||||||||||||||| |||   ||||| |||||||||||||||||||||||||||| || ||||||    
T  35888117 aaatgcaaagtgcattcaatttgctctcttttttattttctctataatcaactactaatgaaaattgtttttacatcttcctataaaagttatttcaa 35888020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 741 - 912
Target Start/End: Original strand, 15995710 - 15995882
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    |||| |||||||||||| ||||||||||||||| | ||||||||  | |||||  |||||||  |||||||||| | |||  ||||| ||||||||||||    
T  15995710 tttgcttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaataaccaatggaaattatttttacatctt 15995809  T
Q  841 cctataaaactt-ttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataa 912  Q
     | || |||||| || | ||||||||||       ||||||| |||||| |||| |||| |||||||||||||    
T  15995810 tccatgaaacttattatgaagaaaacacaaaaaaactatactccaaattcttatattttggttttcttaataa 15995882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 485 - 528
Target Start/End: Complemental strand, 35109292 - 35109249
Alignment:
Q  485 cacacatttcttctcttggttgttttgtgttaaatcactatata 528  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  35109292 cacacatttcttctcttggttgttttgtgttaaatcactatata 35109249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 747 - 841
Target Start/End: Complemental strand, 27810898 - 27810804
Alignment:
Q  747 tattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttc 841  Q
    ||||||||| | ||||||||||||||||||||||||||    |||||  ||||||| ||||| ||||| | ||| ||||||||||||||||||||    
T  27810898 tattctcatgaaattaaatgcaaattacattcaattttccatctcttccattttctatataatcaataaccaataaaaattgtttttacatcttc 27810804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 759 - 859
Target Start/End: Complemental strand, 31769113 - 31769013
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaa-tagctaattaaaattgtttttacatcttcctataaaacttttttc 857  Q
    |||||||||||| | ||||||||||  || |  ||||||||||||||||| ||| || | ||| ||||||||||||||||||||||||||||||| ||||    
T  31769113 attaaatgcaaagtgcattcaatttgctctcatttttattttctctataatcaactatc-aatgaaaattgtttttacatcttcctataaaacttatttc 31769015  T
Q  858 aa 859  Q
    ||    
T  31769014 aa 31769013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 759 - 860
Target Start/End: Original strand, 39170543 - 39170644
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | ||||||||||  |  |||||| |||||||| |||| ||||  | ||| |||||||||||||||||||| |||||||||| |||||    
T  39170543 attaaatgcaaagtgcattcaatttgctatctctttcattttctcaataatcaatgacaaatgaaaattgtttttacatcttcgtataaaacttatttca 39170642  T
Q  859 ag 860  Q
    ||    
T  39170643 ag 39170644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 741 - 841
Target Start/End: Original strand, 44682869 - 44682968
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||| | ||||| |||||||||||| ||||||| |   ||||| | |||||| |||||||||||  ||| |||||||||||||||||||    
T  44682869 tttgtttattctcatgaaattaattgcaaattacatccaattttctatatctttca-tttctccataaccaatagtcaatgaaaattgtttttacatctt 44682967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 759 - 852
Target Start/End: Original strand, 48413730 - 48413820
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt 852  Q
    ||||||||||||||| |||||||||| ||  |||| ||||||||| |||||||||||  ||| |||||||||||| |||||||  |||||||||    
T  48413730 attaaatgcaaatta-attcaattttctc--tcttctattttctccataaccaatagtcaatgaaaattgtttttgcatcttctcataaaactt 48413820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 651 - 841
Target Start/End: Complemental strand, 4237969 - 4237784
Alignment:
Q  651 tttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtttatt 750  Q
    ||||||| |||||| || |||| ||||| ||||||||| |||||||||||||||| |||||        |||||||||| ||||      |||||| |||    
T  4237969 tttctttatcccaaaatgtaagtaaaaaggacaaacttatatcctatttaatcttttttttttaa----tcatcttttcaaagaaaaacttttgtt-att 4237875  T
Q  751 ctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttc 841  Q
    || |||| ||||||||||||||| |||||||| | |  |||||  |||||||   ||| ||||||| |||||||||| |||||||||||||    
T  4237874 ctaataaaattaaatgcaaattatattcaattatatttctcttccattttcttcctaatcaatagccaattaaaattatttttacatcttc 4237784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 15995611 - 15995676
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||| ||| |||||||||| ||||||| ||||| |||||| |||||| ||||||||||||||||||    
T  15995611 ctcactttgtttgtcccaatatataagaaaaaaagacaaatttttattctatttaatcttgttttt 15995676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 18102459 - 18102504
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  18102459 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 18102504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 759 - 852
Target Start/End: Complemental strand, 24151732 - 24151640
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt 852  Q
    |||| ||||||| ||||||||||||  || ||||||  ||||||| ||||||||||   | | |||||||||||||||||||||||||||||||    
T  24151732 attacatgcaaagtacattcaatttgctctctctttc-ttttctcaataaccaataatcagtgaaaattgtttttacatcttcctataaaactt 24151640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 796 - 856
Target Start/End: Original strand, 4069049 - 4069109
Alignment:
Q  796 attttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactttttt 856  Q
    |||||||| |||||||||| | ||| |||||| |||||||||||| |||||||||||||||    
T  4069049 attttctccataaccaataaccaatgaaaattctttttacatctttctataaaactttttt 4069109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 648 - 692
Target Start/End: Complemental strand, 47557977 - 47557933
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttat 692  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||    
T  47557977 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 47557933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 741 - 867
Target Start/End: Original strand, 11780009 - 11780135
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||||| ||||||||||||||||||  |||||| ||  ||||  |||||||  ||||  ||||| | | | ||||| ||||||||||||    
T  11780009 tttgtttattctcataaaattaaatgcaaattacatcaaattttctctttcttccattttcttcataagaaatag-tcaatgaaattatttttacatctt 11780107  T
Q  841 cctataaaactt-ttttcaagaaaacac 867  Q
    || |||||| || |||| ||||||||||    
T  11780108 ccaataaaatttattttaaagaaaacac 11780135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 759 - 862
Target Start/End: Original strand, 33153043 - 33153146
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||||| |||||||||| ||| |  || ||||||||| |||| || || | ||| | ||||||||||||||||| | |||||| || |||||    
T  33153043 attaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattgtttttacatctttccataaaatttatttca 33153142  T
Q  859 agaa 862  Q
    ||||    
T  33153143 agaa 33153146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 759 - 862
Target Start/End: Original strand, 38260325 - 38260428
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | |||| |||||  || |||||| |||||||| ||||  |||| | ||| |||||| |||||||| ||| ||||||||||| |||||    
T  38260325 attaaatgcaaagtgcatttaatttgctctctctttcattttctcaataataaataaccaatgaaaattatttttacaactttctataaaacttatttca 38260424  T
Q  859 agaa 862  Q
    ||||    
T  38260425 agaa 38260428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 646 - 692
Target Start/End: Complemental strand, 18800965 - 18800919
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttat 692  Q
    ||||||||||||||||||| ||||||||||||| |||| ||||||||    
T  18800965 ctcattttctttgtcccaaaatataagcaaaaaagacatacttttat 18800919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 14574449 - 14574514
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||| ||| |||||||||| ||||||||||||  || ||| |||||| ||||||||||||||||||    
T  14574449 ctcactttgtttgtcccaatatataagcaaaatagataaatttttattctatttaatcttgttttt 14574514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 14805800 - 14805845
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||||    
T  14805800 cattttctttgtcccaaaatataagcaaaacagacaaacttttatc 14805845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 15252794 - 15252839
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||||    
T  15252794 cattttctttgtcccaaaatataagcaaaacagacaaacttttatc 15252839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 649 - 702
Target Start/End: Complemental strand, 24151820 - 24151767
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaat 702  Q
    ||||||||||||||||  |||||||||||| ||| |||||||||| ||||||||    
T  24151820 attttctttgtcccaaattataagcaaaaaagaccaacttttatcatatttaat 24151767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 783 - 851
Target Start/End: Complemental strand, 8015800 - 8015732
Alignment:
Q  783 ttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaact 851  Q
    ||||| |||||  ||||| ||||||| ||||| | ||| |||||||||||||||||||| |||||||||    
T  8015800 ttttctctcttgcattttttctataatcaataaccaataaaaattgtttttacatcttcttataaaact 8015732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 698
Target Start/End: Original strand, 36576330 - 36576382
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatt 698  Q
    ||||||||||||||| ||| ||||||| ||||| ||||||||||||| |||||    
T  36576330 ctcattttctttgtctcaaaatataagtaaaaaagacaaacttttatgctatt 36576382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 722 - 785
Target Start/End: Original strand, 4068948 - 4069010
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttt 785  Q
    ||||||| |||||||||| ||||  ||||||||| | ||||||| |||||||||||||||||||    
T  4068948 atctttttcaagattttt-tttgcatattctcatgaaattaaatacaaattacattcaattttt 4069010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 759 - 862
Target Start/End: Original strand, 30082357 - 30082460
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||||| |||||||||| ||| || || |||| |||| |||| || || | ||| | |||||||||||||||||   | ||||||| |||||    
T  30082357 attaaatgcaaattgcattcaatttattctcttttctattctctccataatcattaaccaataagaattgtttttacatcttttcagaaaacttatttca 30082456  T
Q  859 agaa 862  Q
    ||||    
T  30082457 agaa 30082460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 759 - 862
Target Start/End: Original strand, 34808223 - 34808326
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||||| |||||||||| |||||  |||||||||||| ||||    || | ||| | |||| |||||||||||| | || ||||||||| ||    
T  34808223 attaaatgcaaattgcattcaatttgttcacctttttattttctccataatttttaaccaataagaattatttttacatctttccatgaaactttttcca 34808322  T
Q  859 agaa 862  Q
    ||||    
T  34808323 agaa 34808326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 759 - 862
Target Start/End: Complemental strand, 35084211 - 35084108
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||||| |||| ||||| ||| |  ||| |||||||| |||| || || | ||| | |||||||||||||||||  ||| |||||| |||||    
T  35084211 attaaatgcaaattgcattgaatttgttctccttttcattttctccataatcattatccaataagaattgtttttacatctttttatgaaacttatttca 35084112  T
Q  859 agaa 862  Q
    ||||    
T  35084111 agaa 35084108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 875 - 918
Target Start/End: Complemental strand, 37767054 - 37767011
Alignment:
Q  875 ctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||| |||||| | |||||||||||||||||||||||||||    
T  37767054 ctatactccaaattatcatgttttagttttcttaataaatgtga 37767011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 649 - 708
Target Start/End: Original strand, 44877792 - 44877850
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtt 708  Q
    |||||||||||||||| ||||||| |||||    ||||||||||||||||||||||||||    
T  44877792 attttctttgtcccaaaatataagaaaaaaatt-aaacttttatcctatttaatcttgtt 44877850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 649 - 692
Target Start/End: Complemental strand, 46760487 - 46760444
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttat 692  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||    
T  46760487 attttctttgtcccaaaatataagtaaaaaagacaaacttttat 46760444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 884 - 918
Target Start/End: Complemental strand, 2633363 - 2633329
Alignment:
Q  884 aaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||| |||||||||||||||||||||||||||||    
T  2633363 aaattattatgttttagttttcttaataaatgtga 2633329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 822 - 860
Target Start/End: Original strand, 10248600 - 10248638
Alignment:
Q  822 aaaattgtttttacatcttcctataaaacttttttcaag 860  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  10248600 aaaattgtttttacatctttctataaaacttatttcaag 10248638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 646 - 692
Target Start/End: Original strand, 30082276 - 30082322
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttat 692  Q
    ||||||||||||||||||| ||||||||||||| ||| || ||||||    
T  30082276 ctcattttctttgtcccaaaatataagcaaaaaagaccaatttttat 30082322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 646 - 692
Target Start/End: Original strand, 44600358 - 44600404
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttat 692  Q
    ||||||||||||||| ||| ||||||||||||| ||| |||||||||    
T  44600358 ctcattttctttgtctcaaaatataagcaaaaaagaccaacttttat 44600404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 16562678 - 16562723
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||| ||||| |||||| |||||||    
T  16562678 cattttctttgtcccaaaatataagtaaaaaagacaaatttttatc 16562723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 722 - 779
Target Start/End: Original strand, 16562721 - 16562778
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattca 779  Q
    |||||||||||  ||||| |||  |||||||||||| |||||||||||||||| ||||    
T  16562721 atcttttccaattttttttttttgttattctcataaaattaaatgcaaattactttca 16562778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 722 - 779
Target Start/End: Complemental strand, 16602941 - 16602884
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattca 779  Q
    |||||||||||  ||||| |||  |||||||||||| |||||||||||||||| ||||    
T  16602941 atcttttccaattttttttttttgttattctcataaaattaaatgcaaattactttca 16602884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 16602984 - 16602939
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||| ||||| |||||| |||||||    
T  16602984 cattttctttgtcccaaaatataagtaaaaaagacaaatttttatc 16602939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 884 - 913
Target Start/End: Complemental strand, 19492419 - 19492390
Alignment:
Q  884 aaatttttatgttttagttttcttaataaa 913  Q
    ||||||||||||||||||||||||||||||    
T  19492419 aaatttttatgttttagttttcttaataaa 19492390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 25737857 - 25737812
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| |||||||||||||  | |||||||||||    
T  25737857 cattttctttgtcccaaaatataagcaaaaaaaaaaaacttttatc 25737812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 651 - 711
Target Start/End: Complemental strand, 31280658 - 31280597
Alignment:
Q  651 tttctttgtcccaagatataagcaaaaatg-acaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||| ||||||| |||||   ||||| ||||||||||||||| |||||||||    
T  31280658 tttctttgtcccaaaatataagtaaaaaaatacaaatttttatcctatttaagcttgttttt 31280597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 45485883 - 45485928
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    |||||||||||||| || ||||||||||||| |||||| |||||||    
T  45485883 cattttctttgtccaaaaatataagcaaaaaagacaaaattttatc 45485928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 2e-73; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 646 - 918
Target Start/End: Original strand, 42273546 - 42273815
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||        |||||||||||||||||||| |||||    
T  42273546 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgtttttaaaaaaaatcatcttttccaagattttt-tttgt 42273644  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| |||||||||||||| ||||||||||| ||  ||||| |||||||| |||||||||||| ||| |||||||||||||||||||| |||    
T  42273645 ttattctcataaaattaaatgcaaattgcattcaattttctc--tctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttat 42273742  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||| | ||||||||||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  42273743 aaaactttttccaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 42273815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 6686356 - 6686553
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| |||  |||||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| || |||||||||||| |||     
T  6686356 atcttttccaagattttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatg 6686455  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc--aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||       ||||||| |||||| |||||||||||||||||||||||||||||    
T  6686456 aaaattgtttttacatcttcctataaaacttttttccaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataaatgtga 6686553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 646 - 918
Target Start/End: Original strand, 20643911 - 20644182
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||||||||        || | ||||||||||      |||||    
T  20643911 ctcattttctttatcccaaaatataagcaaaaaagacaaacttttatcttatttaatcttgtttttttaaaaaatctt-ttttccaagaaaaacttttgt 20644009  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||| | ||||||||||||||||||||||||||  | |||||| ||||| || |||||||||||| ||| ||||||||||||||||||||||||    
T  20644010 ttattctcatgaaattaaatgcaaattacattcaattttccctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 20644109  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||| | ||||||||||        |||||| |||||| ||||||||||||||||||||||| |||||    
T  20644110 aaaactttttccaaagaaaacacaaaaaat-tatactccaaattcttatgttttagttttcttaataagtgtga 20644182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 646 - 917
Target Start/End: Original strand, 34425227 - 34425497
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||||| ||||||| ||||||||           |||||| |||||      |||||    
T  34425227 ctcattttctttgtcctaaaatataagcaaaaaagacaaacttttatcccatttaattttgtttttttaaaaaaatctctttttcaagaaaaacttttgt 34425326  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| ||||||||||||||| |||||||||| || |||||||||||| || |||| ||||||| ||| |||||||||||||||| |||||||    
T  34425327 ttattctcataaaattaaatgcaaattatattcaattttctctctcttttatttt-tccataatcaatagccaatgaaaattgtttttacatattcctat 34425425  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtg 917  Q
    |||||||||||| ||||||||||       |||||||||||||| ||||||||||||||||||||||| ||||    
T  34425426 aaaacttttttcaaagaaaacac-aaaaaactatacttcaaattcttatgttttagttttcttaataagtgtg 34425497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 647 - 867
Target Start/End: Original strand, 32110900 - 32111120
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtt 746  Q
    ||||||||||| ||| || ||||||||||||| ||||||| ||||||||||||||||||||||||        || | ||||||||||  ||| ||||||    
T  32110900 tcattttctttatcctaaaatataagcaaaaaagacaaacatttatcctatttaatcttgtttttaaaaaaaatc-tgttttccaagaaatttttttgtt 32110998  T
Q  747 tattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctata 846  Q
    ||||||||||| ||||||||||||||||||| |||||| || |||||| || || || |||||||||||  ||| ||||||||||||||||||||||||     
T  32110999 tattctcataaaattaaatgcaaattacatttaattttctctctctttcatattttccataaccaatagtcaatgaaaattgtttttacatcttcctatg 32111098  T
Q  847 aaacttttttc-aagaaaacac 867  Q
    ||||||||||| ||||||||||    
T  32111099 aaacttttttcaaagaaaacac 32111120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 722 - 918
Target Start/End: Complemental strand, 37562950 - 37562754
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| || |||| |||||||||||     
T  37562950 atcttttccatgattttt-tttgtttattctcataaaattaaatgcaaattacattcaattttctctgtctttcattttttccataaacaatagctaatg 37562852  T
Q  822 aaaattgtttttacatcttcctataaaacttttttcaagaaaacac-nnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||||||||||||||||||| ||| |||| ||        ||||||| |||||| ||||||||||||||||||||||| |||||    
T  37562851 aaaattgtttttacatcttcctataaaactttttccaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 37562754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 722 - 867
Target Start/End: Complemental strand, 11262072 - 11261927
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| || |||||||||||| |||     
T  11262072 atcttttccaagattttt-tttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatg 11261974  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacac 867  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  11261973 aaaattgtttttacatcttcctataaaacttttttcaaagaaaacac 11261927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 648 - 918
Target Start/End: Original strand, 25840762 - 25841032
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgttt 747  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||        ||||||||||||| |      |||  ||    
T  25840762 cattttctttgtcccaaaatataagcaaaaatgacaaacttttattctatttaatcttgttttttaaaaaaatcatcttttccaataaaaactttttctt 25840861  T
Q  748 attctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataa 847  Q
    |||||||| | ||||||||||||||||||| |||||| || |||||||||||| || |||| |||| |  ||| ||||||||||||||||||||| || |    
T  25840862 attctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaacaattgtcaatgaaaattgtttttacatcttcccatga 25840961  T
Q  848 aacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||| || | ||||||||||       |||| || |||||||||||| ||||||||||||||||| |||||    
T  25840962 aacttattccaaagaaaacac-aaaaaactatgctacaaatttttatgctttagttttcttaataagtgtga 25841032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 722 - 918
Target Start/End: Complemental strand, 43590150 - 43589955
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||| |||||||||| |||||| |||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| || |||||||||||| |||     
T  43590150 atctttttcaagatttttttttgtt-attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatg 43590052  T
Q  822 aaaattgtttttacatcttcctataaaacttttt-tcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||| |||||||||||||||   ||||||||||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  43590051 aaaattgtttttacatctccctataaaactttttcaaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 43589955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 646 - 855
Target Start/End: Original strand, 32017603 - 32017808
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||||||| |||||||||| ||| ||||||||| |||||||||||||||||||||||||| |||||          || |||| ||||| |||| |||||    
T  32017603 ctcatttt-tttgtcccaaaatacaagcaaaaacgacaaacttttatcctatttaatcttttttttttttaaat--atttttttcaagaattttttttgt 32017699  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| |||||||||||||||||||||| ||| || ||||||  |||| || |||||||||||  ||| ||||||||||||||||||||||||    
T  32017700 ttattctcataaaattaaatgcaaattacattcaactttctctctctttcgtttt-tccataaccaatagacaatgaaaattgtttttacatcttcctat 32017798  T
Q  846 aaaacttttt 855  Q
    ||||| ||||    
T  32017799 aaaacgtttt 32017808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 646 - 918
Target Start/End: Original strand, 20038999 - 20039270
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||||||| |||||||||  ||||||||||||  ||||||||||||||||| |||||||| |||||        || | ||||||||||      |||||    
T  20038999 ctcattttttttgtcccacaatataagcaaaacagacaaacttttatcctacttaatcttctttttttaaaaaatc-tattttccaagaaaaacttttgt 20039097  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    | |||||||||| ||||||||||||||||||| |||||| |  |||||| ||||| |  |||||||||||| ||| ||||||| ||||||||||||||||    
T  20039098 taattctcataaaattaaatgcaaattacatttaattttctatctctttcatttttttcataaccaatagccaataaaaattggttttacatcttcctat 20039197  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||| |||||| ||||||||||        |||||| |||||| ||||||||||||||||||||||| |||||    
T  20039198 aaaacctttttcaaagaaaacacaaaaaat-tatactccaaattcttatgttttagttttcttaataagtgtga 20039270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 647 - 911
Target Start/End: Complemental strand, 38130379 - 38130113
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtt 746  Q
    |||||||||||||||||| ||||||| ||||| || ||| |||||| ||||||||||||||||||        || ||||||| ||||      ||||||    
T  38130379 tcattttctttgtcccaaaatataagtaaaaaagataaatttttattctatttaatcttgtttttttaaagaatc-tcttttctaagaaaaacttttgtt 38130281  T
Q  747 tattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctata 846  Q
    ||||||||||| |||||||| | ||||||||||||||| || |||||| ||||| || |||||||||||| ||| |||||| ||||||||| ||||||||    
T  38130280 tattctcataaaattaaatgtagattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatattcctata 38130181  T
Q  847 aaacttttt-tcaagaaaacac--nnnnnnnctatacttcaaatttttatgttttagttttcttaata 911  Q
    ||||||||| | ||||||||||         ||||| | |||||| ||||||||||||||||||||||    
T  38130180 aaactttttctaaagaaaacacaaaaaactactatattccaaattcttatgttttagttttcttaata 38130113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 647 - 855
Target Start/End: Original strand, 8225361 - 8225567
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtt 746  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||        || ||||||||||||      ||||||    
T  8225361 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcatatttaatcttgttttttaaaaaaatc-tcttttccaagaaaaacttttgtt 8225459  T
Q  747 tattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaa-attgtttttacatcttcctat 845  Q
    ||||||||||| |||||||||||||||| |||||  ||||| |||||| ||||| || |||||||||||| ||| |||  || ||||||||| |||||||    
T  8225460 tattctcataaaattaaatgcaaattacgttcaa--ttttctctctttcattttttccataaccaatagccaatgaaattttttttttacattttcctat 8225557  T
Q  846 aaaacttttt 855  Q
    ||||||||||    
T  8225558 aaaacttttt 8225567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 722 - 908
Target Start/End: Complemental strand, 37522778 - 37522592
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataata-ttaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaat 820  Q
    |||||||||| ||||||| ||||| ||||||||||| | ||||||||||||||||||||||||| ||  ||||| ||||| || |||| ||||||| |||    
T  37522778 atcttttccatgattttt-tttgtctattctcataaaaattaaatgcaaattacattcaattttctctgtctttcattttttccataaacaatagccaat 37522680  T
Q  821 taaaattgtttttacatcttcctataaaacttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttctta 908  Q
     |||||||||||||||||||||||||||||||||| ||| ||||          ||||||| |||||| |||||||||||||||||||    
T  37522679 gaaaattgtttttacatcttcctataaaactttttccaaaaaaaacacaaaaaactatactccaaattcttatgttttagttttctta 37522592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 741 - 859
Target Start/End: Original strand, 38280838 - 38280956
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| || |||||| ||||| || |||| ||||| | ||| |||||||||||||||| ||    
T  38280838 tttgtttattctcataaaattaaatgcaaattatattcaattttctctctctttcattttttccataatcaataaccaatgaaaattgtttttacatttt 38280937  T
Q  841 cctataaaacttttttcaa 859  Q
    |||||||||||||||||||    
T  38280938 cctataaaacttttttcaa 38280956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 646 - 842
Target Start/End: Complemental strand, 9957680 - 9957488
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||  ||||        || | ||||||||||      |||||    
T  9957680 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttatttaatcttacttttttaaaaactctt-ttttccaagaaaaacttttgt 9957582  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcc 842  Q
    |||||||||||| ||||||||||||||||||||||   |||| |||||| ||||| || |||||||||||| ||| |||||||||||||||||||||    
T  9957581 ttattctcataaaattaaatgcaaattacattcaa--ctttctctctttcattttttc-ataaccaatagccaatgaaaattgtttttacatcttcc 9957488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 646 - 784
Target Start/End: Complemental strand, 12730251 - 12730107
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt-----nnnnnnnntcatcttttccaaga-ttttt 739  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||| |||||||||             |||| |||||||||| |||||    
T  12730251 ctcattttctttgtcccaaaatataagtaaaaaagacaaacttttatcctatttaaccttgttttttaaaaaaaaaaaatcattttttccaagatttttt 12730152  T
Q  740 ctttgtttattctcataatattaaatgcaaattacattcaatttt 784  Q
     ||||||||||||||||| ||||||||||||||||||||||||||    
T  12730151 ttttgtttattctcataaaattaaatgcaaattacattcaatttt 12730107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 747 - 914
Target Start/End: Original strand, 19413138 - 19413305
Alignment:
Q  747 tattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctata 846  Q
    ||||||||| | ||||||||||||||||||| ||||||  | |||||||||||| || ||||||||| || ||| ||||||||||||||||||||| |||    
T  19413138 tattctcatgaaattaaatgcaaattacatttaattttccctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccata 19413237  T
Q  847 aaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaat 914  Q
    |||||| |||| ||||||||||       |||| || |||||| ||||  |||||||||||||||||||    
T  19413238 aaacttatttcaaagaaaacac-aaaaaactatgctacaaattcttatactttagttttcttaataaat 19413305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 647 - 852
Target Start/End: Complemental strand, 39505495 - 39505292
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtt 746  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||| |||||        | ||||||||||| |      |||  |    
T  39505495 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttattttatttaatcttatttttaaaaaaaat-atcttttccaataaaaactttttct 39505397  T
Q  747 tattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctata 846  Q
    ||||||||| | ||||||||||||||||||| |||||| || |||||||||||| || ||||| ||| || ||| ||||||||||||||||||| | |||    
T  39505396 tattctcatgaaattaaatgcaaattacatttaattttctctctcttttatttt-tccataacgaattgccaatgaaaattgtttttacatcttaccata 39505298  T
Q  847 aaactt 852  Q
    ||||||    
T  39505297 aaactt 39505292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 741 - 852
Target Start/End: Complemental strand, 43454493 - 43454382
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    |||||||| |||||||  |||||||| ||||||||||||||||| || ||||||||||||||   ||||||||||  ||| |||||||||||||||| ||    
T  43454493 tttgtttaatctcatagaattaaatgtaaattacattcaattttctctctcttttattttcttcttaaccaatagtaaatgaaaattgtttttacatatt 43454394  T
Q  841 cctataaaactt 852  Q
    ||||||||||||    
T  43454393 cctataaaactt 43454382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 650 - 864
Target Start/End: Complemental strand, 104480 - 104261
Alignment:
Q  650 ttttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtttat 749  Q
    |||||| |||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||        || | |||| |||||      ||||| |||    
T  104480 ttttctctgtcccaaaatataagtaaaaaagacaaacttttatcctatttaatcttgttttt--tttaaatc-tttttttcaagaaaaacttttgtctat 104384  T
Q  750 tctcataatattaaatgcaaattacattcaattt--------tttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttc 841  Q
    |||||||| |||||||||| ||||||||||||||        | || |||||| ||||| |  ||||| |||||||||| |||||||||||||||||||     
T  104383 tctcataaaattaaatgcatattacattcaattttctctctctctctctctttcatttttttcataactaatagctaatgaaaattgtttttacatcttt 104284  T
Q  842 ctataaaacttttttcaagaaaa 864  Q
    |||||||||||||||||| ||||    
T  104283 ctataaaacttttttcaaaaaaa 104261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 746 - 918
Target Start/End: Original strand, 17351384 - 17351556
Alignment:
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||| | |||||||| ||||||||||||||||| || || | | |||||||| |||| ||||||| ||||||||||||||||||||||| | ||    
T  17351384 ttattctcatgaaattaaatgaaaattacattcaattttctctctatgtcattttctccataatcaatagccaattaaaattgtttttacatctttccat 17351483  T
Q  846 aaaacttttttcaa-gaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||| || ||| ||||| |        ||||||| ||| |||||| || ||||||||||||||||||||||    
T  17351484 aaaacttattccaacgaaaata-aaaaaaactatactccaagtttttacgtattagttttcttaataaatgtga 17351556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 661 - 842
Target Start/End: Original strand, 4463271 - 4463452
Alignment:
Q  661 ccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtttattctcataatat 760  Q
    |||| ||||||| ||||| |||||||||||||  |||||||||||||||||        ||||||||||||| |      |||| |||| ||||| | ||    
T  4463271 ccaaaatataagaaaaaaagacaaacttttattatatttaatcttgtttttaaaagaaatcatcttttccaataaaaacttttgcttatactcatgaaat 4463370  T
Q  761 taaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcc 842  Q
    ||| ||||||||||||| |||||| || |||||| ||||| || |||||||||||| | | |||||||||||||||||||||    
T  4463371 taattgcaaattacatttaattttctctctctttcattttttccataaccaatagccagtgaaaattgtttttacatcttcc 4463452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 671 - 814
Target Start/End: Complemental strand, 5984358 - 5984212
Alignment:
Q  671 agcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnn---tcatcttttccaagatttttctttgtttattctcataatattaaatgc 767  Q
    |||||||| ||||||||||||||||||||||||||||||||           |||||||||||||||      ||||||||||||||||| ||||||||     
T  5984358 agcaaaaaagacaaacttttatcctatttaatcttgtttttttttttaaaagtcatcttttccaagaacaacttttgtttattctcataaaattaaatgt 5984259  T
Q  768 aaattacattcaattttttcactcttttattttctctataaccaata 814  Q
    |||||||||| ||| || || |||||| |||||||||||||||||||    
T  5984258 aaattacattaaatattctctctctttcattttctctataaccaata 5984212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 759 - 852
Target Start/End: Complemental strand, 42104400 - 42104307
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt 852  Q
    |||||||||||| ||||||||||||| ||||||||  |||||||| ||||  |||||| ||| ||||||||||||||||||||| || ||||||    
T  42104400 attaaatgcaaaatacattcaattttatcactcttccattttctccataattaatagccaatgaaaattgtttttacatcttcccatgaaactt 42104307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 759 - 852
Target Start/End: Complemental strand, 10154080 - 10153987
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt 852  Q
    |||||||||||| | ||||||||||  |  |||||| |||||||| || ||||||| | ||| |||||||||||||||||||||||||||||||    
T  10154080 attaaatgcaaagtgcattcaatttgctatctctttcattttctcaatgaccaataaccaatgaaaattgtttttacatcttcctataaaactt 10153987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 646 - 711
Target Start/End: Complemental strand, 12793071 - 12793006
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||| |||| |||||||||||||  ||||||||||||||||||||| |||||||||    
T  12793071 ctcattttctttgttccaaaatataagcaaaaaatacaaacttttatcctatttaaccttgttttt 12793006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 759 - 859
Target Start/End: Complemental strand, 12912446 - 12912346
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | |||| |||||  || |||||| ||||| || | |||||||| | ||| ||||||||||||||||||||||||||||||| |||||    
T  12912446 attaaatgcaaagtgcatttaatttgctctctctttcattttttcaacaaccaataaccaatgaaaattgtttttacatcttcctataaaacttatttca 12912347  T
Q  859 a 859  Q
    |    
T  12912346 a 12912346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 12792987 - 12792929
Alignment:
Q  726 tttccaaga-tttttctttgtttattctcataatattaaatgcaaattacattcaattt 783  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  12792987 tttccaagaatttttttttgtttattctcataaaattaaatgcaaattacattcaattt 12792929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 759 - 859
Target Start/End: Complemental strand, 3463967 - 3463867
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | ||||||||||  || || ||| ||||||||||||| |||   | ||| ||||||||||||| ||||||||||||||||| |||||    
T  3463967 attaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaataaaaattgtttttatatcttcctataaaacttatttca 3463868  T
Q  859 a 859  Q
    |    
T  3463867 a 3463867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 646 - 705
Target Start/End: Original strand, 17351277 - 17351337
Alignment:
Q  646 ctcattttctttgtcccaagata-taagcaaaaatgacaaacttttatcctatttaatctt 705  Q
    ||||||||||||||||||| ||  |||||||||| ||||||||||||||||||||||||||    
T  17351277 ctcattttctttgtcccaaaattgtaagcaaaaaagacaaacttttatcctatttaatctt 17351337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 789 - 918
Target Start/End: Original strand, 23233450 - 23233579
Alignment:
Q  789 ctcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaat 887  Q
    |||||| |||||||| ||||||||||| |||| |||| ||||||||||| ||||||||||  | ||||| ||||||||||       |||||| ||||||    
T  23233450 ctctttcattttctccataaccaatagttaataaaaactgtttttacatattcctataaagttgttttcaaagaaaacac-aaaaaactatacgtcaaat 23233548  T
Q  888 ttttatgttttagttttcttaataaatgtga 918  Q
    | ||||||||||| ||||| ||||| |||||    
T  23233549 tcttatgttttagatttctcaataagtgtga 23233579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 789 - 852
Target Start/End: Complemental strand, 5369153 - 5369090
Alignment:
Q  789 ctcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt 852  Q
    |||||| |||||||| |||||||| | | ||| |||||||||||||||||||||||||||||||    
T  5369153 ctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaactt 5369090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 725 - 803
Target Start/End: Complemental strand, 446075 - 445997
Alignment:
Q  725 ttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctc 803  Q
    ||||| ||||||||| ||| |||||| |||| | |||||||| ||||| |||||||||||||| |||||| ||||||||    
T  446075 ttttcaaagatttttttttttttattatcatgaaattaaatgaaaattgcattcaattttttctctctttcattttctc 445997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 743 - 867
Target Start/End: Complemental strand, 41625678 - 41625554
Alignment:
Q  743 tgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcc 842  Q
    |||||||| |||| | ||||||| ||||||||||| ||||||  | |||||  ||||| || |||| ||||||| ||| |||||  ||||||||||||||    
T  41625678 tgtttattttcatgaaattaaattcaaattacatttaattttccctctcttccattttttc-ataatcaatagcgaatgaaaataatttttacatcttcc 41625580  T
Q  843 tataaaacttttttc-aagaaaacac 867  Q
    ||| |||||| |||| ||||||||||    
T  41625579 tatgaaacttatttcaaagaaaacac 41625554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 722 - 777
Target Start/End: Complemental strand, 842754 - 842698
Alignment:
Q  722 atcttttccaagatttttctttgt-ttattctcataatattaaatgcaaattacatt 777  Q
    |||||||||||||||||| ||| | |||||||||||| |||||||||||||||||||    
T  842754 atcttttccaagatttttttttttattattctcataaaattaaatgcaaattacatt 842698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 746 - 854
Target Start/End: Original strand, 7071234 - 7071342
Alignment:
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||| | ||||||| ||||||||||||||||||  | |||||  ||||||||  ||| ||||||  ||| |||||| ||||||||| |||| ||    
T  7071234 ttattctcatgaaattaaatacaaattacattcaattttcacgctcttccattttctccgtaatcaatagtcaatgaaaattatttttacattttcccat 7071333  T
Q  846 aaaactttt 854  Q
     ||||||||    
T  7071334 gaaactttt 7071342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 652 - 711
Target Start/End: Original strand, 38280748 - 38280807
Alignment:
Q  652 ttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    ||||||||| ||| ||||||  ||||| |||||||||||||||||||||||||| |||||    
T  38280748 ttctttgtctcaaaatataaataaaaaagacaaacttttatcctatttaatcttattttt 38280807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 754 - 864
Target Start/End: Complemental strand, 2002290 - 2002180
Alignment:
Q  754 ataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttt 853  Q
    |||| |||||||||||||| |||||||||| ||| |  || |||| |||| |||| || || | ||| | ||||||||||||||||| | |||||||||     
T  2002290 ataaaattaaatgcaaattgcattcaatttgttctcctttctattctctccataatcattaaccaataagaattgtttttacatctttccataaaactta 2002191  T
Q  854 tttcaagaaaa 864  Q
    ||| |||||||    
T  2002190 ttttaagaaaa 2002180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 789 - 859
Target Start/End: Original strand, 6391908 - 6391978
Alignment:
Q  789 ctcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaa 859  Q
    |||||| |||||||||||||| |||| | ||| ||| ||||||||||||||| |||| |||||| ||||||    
T  6391908 ctctttcattttctctataactaataaccaataaaagttgtttttacatctttctatgaaacttatttcaa 6391978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 741 - 831
Target Start/End: Original strand, 11858311 - 11858401
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgttt 831  Q
    ||||||||||||||| |  |||||| |||||||| |||||||||||| || ||  |||||||| |||| ||||| | ||| ||||||||||    
T  11858311 tttgtttattctcatgaacttaaatacaaattacgttcaattttttctcttttccattttctccataatcaataaccaataaaaattgttt 11858401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 842797 - 842752
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||    
T  842797 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 842752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 7071135 - 7071200
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||| ||||||||| |||| |||||||| |||| |||||||||||||| |||||||| || |||||    
T  7071135 ctcactttctttgtaccaaaatataagcgaaaaagacaaacttttatcttatttaatttttttttt 7071200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 759 - 860
Target Start/End: Complemental strand, 8146165 - 8146064
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||||| |||||||||| ||| || |||||||||||| ||||    || ||||| | |||| |||||||||||| | || |||||| |||||    
T  8146165 attaaatgcaaattgcattcaatttgttctcttttttattttctccataatttttaactaatgagaattatttttacatctttccatgaaacttatttca 8146066  T
Q  859 ag 860  Q
    ||    
T  8146065 ag 8146064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 822 - 859
Target Start/End: Original strand, 8959712 - 8959749
Alignment:
Q  822 aaaattgtttttacatcttcctataaaacttttttcaa 859  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  8959712 aaaattgtttttacatcttcctataaaacttatttcaa 8959749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 11262115 - 11262070
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  11262115 cattttctttgtcccaaaatataagtaaaaaagacaaacttttatc 11262070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 646 - 711
Target Start/End: Complemental strand, 16153590 - 16153525
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||| ||||||||||   ||||||||||| |||||||||||||| ||||||||  |||||||    
T  16153590 ctcattttgtttgtcccaaatgataagcaaaaaagacaaacttttatcatatttaattatgttttt 16153525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 37522821 - 37522776
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  37522821 cattttcttcgtcccaaaatataagcaaaaaagacaaacttttatc 37522776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 37562993 - 37562948
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  37562993 cattttcttcgtcccaaaatataagcaaaaaagacaaacttttatc 37562948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 789 - 849
Target Start/End: Complemental strand, 12792898 - 12792839
Alignment:
Q  789 ctcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaa 849  Q
    |||||| |||||||| |||||||||||| ||| |||||||| ||||| |||||||||||||    
T  12792898 ctctttcattttctccataaccaatagccaatgaaaattgtctttac-tcttcctataaaa 12792839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 647 - 699
Target Start/End: Complemental strand, 25962695 - 25962643
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctattt 699  Q
    |||||||||||||| ||| |||||||||||||  |||||||||||| ||||||    
T  25962695 tcattttctttgtctcaaaatataagcaaaaaatacaaacttttatgctattt 25962643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 759 - 851
Target Start/End: Complemental strand, 31690772 - 31690680
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaact 851  Q
    |||||||||||||| |||||||||| ||| |  |||||||||||| ||||    || | ||| |||||| |||||||||||| ||||||||||    
T  31690772 attaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttctataaaact 31690680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 698
Target Start/End: Complemental strand, 35462962 - 35462910
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatt 698  Q
    ||||||||||||||| ||| ||||||||||||| ||| ||||||||| |||||    
T  35462962 ctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 35462910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 759 - 862
Target Start/End: Original strand, 24439579 - 24439682
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||||| |||||||||| ||| |  ||||||||| || ||||  | |||| ||| | ||||||||||||||||| | || |||||| || ||    
T  24439579 attaaatgcaaattgcattcaatttgttctcctttttattttttccataataattagccaatgataattgtttttacatctttccatgaaacttattcca 24439678  T
Q  859 agaa 862  Q
    ||||    
T  24439679 agaa 24439682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 822 - 860
Target Start/End: Original strand, 8506503 - 8506541
Alignment:
Q  822 aaaattgtttttacatcttcctataaaacttttttcaag 860  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  8506503 aaaattgtttttacatctttctataaaacttatttcaag 8506541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 11857957 - 11858023
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaat-gacaaacttttatcctatttaatcttgttttt 711  Q
    ||||||||||||||| ||| || ||||||||||  |||||||||| ||||  |||||||||||||||    
T  11857957 ctcattttctttgtctcaaaatgtaagcaaaaaaagacaaactttaatcccttttaatcttgttttt 11858023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 646 - 692
Target Start/End: Complemental strand, 16286327 - 16286281
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttat 692  Q
    ||||||||||||||| ||| ||||||| ||||| |||||||||||||    
T  16286327 ctcattttctttgtctcaaaatataagtaaaaaagacaaacttttat 16286281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 742 - 780
Target Start/End: Original strand, 23233391 - 23233429
Alignment:
Q  742 ttgtttattctcataatattaaatgcaaattacattcaa 780  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  23233391 ttgtttattctcataaaaataaatgcaaattacattcaa 23233429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 759 - 848
Target Start/End: Original strand, 28907077 - 28907167
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactctttt-attttctctataaccaatagctaattaaaattgtttttacatcttcctataaa 848  Q
    |||||||||||| | |||||||||| ||| || |||| |||||||||| || |||   | ||| ||||||||||||||||| |||||||||    
T  28907077 attaaatgcaaagtgcattcaatttgttctcttttttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctataaa 28907167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 759 - 848
Target Start/End: Original strand, 28943472 - 28943562
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactctttt-attttctctataaccaatagctaattaaaattgtttttacatcttcctataaa 848  Q
    |||||||||||| | |||||||||| ||| || |||| |||||||||| || |||   | ||| ||||||||||||||||| |||||||||    
T  28943472 attaaatgcaaagtgcattcaatttgttctcttttttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctataaa 28943562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 6686313 - 6686358
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| |||||| |||||| || |||||||||||    
T  6686313 cattttctttgtcccaaaatataaacaaaaaagataaacttttatc 6686358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 796 - 849
Target Start/End: Complemental strand, 12729989 - 12729937
Alignment:
Q  796 attttctctataaccaatagctaattaaaattgtttttacatcttcctataaaa 849  Q
    |||||||| |||||||||||| ||| |||||||| ||||| |||||||||||||    
T  12729989 attttctccataaccaatagccaatgaaaattgtctttac-tcttcctataaaa 12729937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 649 - 710
Target Start/End: Original strand, 19413040 - 19413101
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttt 710  Q
    |||||||  |||| || ||||||||||||| || ||||||||||  ||||||||||||||||    
T  19413040 attttctcagtcctaaaatataagcaaaaaagataaacttttattttatttaatcttgtttt 19413101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 43590193 - 43590148
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    |||||||||||| |||| |||||||||||||  |||||||||||||    
T  43590193 cattttctttgtaccaaaatataagcaaaaaatacaaacttttatc 43590148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 7e-70; HSPs: 92)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 647 - 918
Target Start/End: Complemental strand, 50651259 - 50650989
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtt 746  Q
    ||||||||||||| |||| ||||||||||||| || |||||||||||||||||||||||||||||        ||||||||||||| |||||  |||| |    
T  50651259 tcattttctttgttccaatatataagcaaaaaagataaacttttatcctatttaatcttgtttttttaaaaaatcatcttttccaatattttg-tttgat 50651161  T
Q  747 tattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctata 846  Q
    ||||||||||| |||||||||||||||||||||||||| || ||||||||||||||| |||||||||||  ||| |||||||||||||||||||||||||    
T  50651160 tattctcataaaattaaatgcaaattacattcaattttctctctcttttattttctccataaccaatagtcaatgaaaattgtttttacatcttcctata 50651061  T
Q  847 aaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||| | ||||||||||       ||||| |||||||| ||||||||||||||||||||||| |||||    
T  50651060 aaactttttgcaaagaaaacac-aaaaaactatatttcaaattcttatgttttagttttcttaataagtgtga 50650989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 647 - 912
Target Start/End: Original strand, 37074860 - 37075126
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtt 746  Q
    |||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||           |||||| ||||| || | ||||||    
T  37074860 tcattttctttgtcccgaaatataagcaaaaaagacaaacttttatcctatttaatcttgtttttctaaaaaaatctctttttcaagaattat-tttgtt 37074958  T
Q  747 tattctcataatattaaatgcaaattacattcaattttttcactctttt--attttctctataaccaatagctaattaaaattgtttttacatcttccta 844  Q
    ||||||||||| |||||||||||||||||||||||||| || |||||||  ||||| ||||||||||||||| ||| |||||||| ||||||||||||||    
T  37074959 tattctcataaaattaaatgcaaattacattcaattttatcgctctttttcattttttctataaccaatagccaatgaaaattgtgtttacatcttccta 37075058  T
Q  845 taaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataa 912  Q
    ||||||||||| | ||||||||||        ||||||||||||| ||||||||||||||| |||||||    
T  37075059 taaaactttttccaaagaaaacacaaaaaat-tatacttcaaattcttatgttttagtttttttaataa 37075126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 646 - 918
Target Start/End: Original strand, 35963050 - 35963324
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnn--tcatcttttccaagatttttcttt 743  Q
    |||||||||||||| |||| |||||||||||||||||| |||||| ||||||||||||||||||||          |||||||||| ||||  |   |||    
T  35963050 ctcattttctttgtaccaaaatataagcaaaaatgacacacttttctcctatttaatcttgtttttaaaaaaaaaatcatcttttctaagaaatactttt 35963149  T
Q  744 gtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcct 843  Q
    |||||||||||||| |||||||||||||| |||| |||||| || |||||| |||||||| |||||||||| | ||| |||||||||||| |||||||||    
T  35963150 gtttattctcataaaattaaatgcaaattgcatttaattttctctctctttcattttctccataaccaataaccaataaaaattgtttttccatcttcct 35963249  T
Q  844 ataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||| | || |||||||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  35963250 ataaaactttttccaaacaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 35963324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 722 - 918
Target Start/End: Complemental strand, 37042564 - 37042369
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| || |||| ||||||| |||     
T  37042564 atcttttccaagatttttttttgtt-attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataatcaatagccaatg 37042466  T
Q  822 aaaattgtttttacatcttcctataaaacttttttcaa-gaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||       ||||||| |||||||||||||||||||||||||||||| |||||    
T  37042465 aaaattgtttttacatcttcctataaaactttttccaacgaaaacac-aaaaaactatactccaaatttttatgttttagttttcttaataagtgtga 37042369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 646 - 918
Target Start/End: Complemental strand, 14752431 - 14752160
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||        || | ||||||||||      ||| |    
T  14752431 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttatttaatcttgtttttttaaaaaatctt-ttttccaagaaaaacttttct 14752333  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| |||||||||||||||||||||||||| || |||||| ||||| || |||||||||||  ||| ||||||||||||||||||||||||    
T  14752332 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctat 14752233  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||  ||||| | ||||||||||        |||||| |||||| ||||||||||||||||| ||||| |||||    
T  14752232 aaatttttttccaaagaaaacacaaaaaat-tatactccaaattcttatgttttagttttctaaataagtgtga 14752160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 47864167 - 47864363
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| |  |||| ||||||  |||     
T  47864167 atctttttcaagatttttttttgtttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataatcaatagtcaatg 47864266  T
Q  822 aaaattgtttttacatcttcctataaaacttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||||||||||||||||||||||||||||||||  |||          ||||||| |||||| | |||||||||||||||||||||||||||    
T  47864267 aaaattgtttttacatcttcctataaaacttttttcaaagaaaatgcaaaaaactatactccaaattctcatgttttagttttcttaataaatgtga 47864363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 646 - 918
Target Start/End: Complemental strand, 7866706 - 7866435
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||| ||||        |  |||||| |||||      |||||    
T  7866706 ctcattttctttgtcccaaaatataaacaaaaaagacaaacttttatcctatttaatcttgattttttaaaaaatt-tctttttcaagaaaaacttttgt 7866608  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| |||||||| ||||||||||||||||| |  |||||||||||| || |||||||||||  ||| |||||||||||||||||||| |||    
T  7866607 ttattctcataaaattaaatgaaaattacattcaattttctatctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcttat 7866508  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||| ||||||| |        |||||||  ||||| ||||||||||||||||||||||| |||||    
T  7866507 aaaacttttttcaaagaaaata-aaaaaaactatactctaaattcttatgttttagttttcttaataagtgtga 7866435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 646 - 918
Target Start/End: Original strand, 28875307 - 28875578
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||| ||||||||| |||||||||||||  | ||||||||||| |||||||||||||||||        || ||||||| ||||      |||||    
T  28875307 ctcattttcattgtcccaaaatataagcaaaaaatataaacttttatcttatttaatcttgtttttaaaaaaaatc-tcttttctaagaaaaacttttgt 28875405  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| ||||||| |||||||||||||||||| |   ||||| |||||||| |||||||||||| ||| |||||||||||||||||||| |||    
T  28875406 ttattctcataaaattaaatacaaattacattcaattttctttttctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttat 28875505  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||| | ||||||||||       ||||| | |||||| ||||| |||||||||||||||||||||||    
T  28875506 aaaactttttccaaagaaaacac-aaataactatagtccaaattcttatgctttagttttcttaataaatgtga 28875578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 722 - 912
Target Start/End: Complemental strand, 23311740 - 23311551
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||| |||||||||| |||||| |||||||||| |||||||| | ||||||||||||||| ||  ||||| ||||| || |||||||||||| |||     
T  23311740 atctttttcaagatttttttttgtt-attctcataaaattaaatgtatattacattcaattttctctttctttcattttttccataaccaatagccaatg 23311642  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataa 912  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||       |||||||  |||||||||||||||||||||||||||||    
T  23311641 aaaattgtttttacatcttcctataaaacttttttcaaagaaaacac-acaaaactatactctaaatttttatgttttagttttcttaataa 23311551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 646 - 867
Target Start/End: Original strand, 6437980 - 6438205
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatga-caaacttttatcctatttaatcttgtttttnnnnnnnntca--tcttttccaa-gatttttct 741  Q
    ||||||||||||||||||| |||||||||||||  | |||||||||||||||||||||||||||||           |  |||||| | | |||| || |    
T  6437980 ctcattttctttgtcccaaaatataagcaaaaaaaaacaaacttttatcctatttaatcttgttttaaaaaaaaaaaaaatcttttacgatgattgtt-t 6438078  T
Q  742 ttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttc 841  Q
    |||||||||||||||| ||||||||||||||||||| |||||| || |||||| |||||||| |||||||||||| ||| ||||||||||||||||||||    
T  6438079 ttgtttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttc 6438178  T
Q  842 ctataaaacttttttc-aagaaaacac 867  Q
    ||||||| |||||||| ||||||||||    
T  6438179 ctataaagcttttttcaaagaaaacac 6438205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 722 - 912
Target Start/End: Complemental strand, 11054455 - 11054269
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||    |||||| ||||| || |||||||||||| |||     
T  11054455 atcttttccaagatttttttttgtt-attctcataaaattaaatgcaaattacattcaatttt----ctctttcattttttccataaccaatagccaatg 11054361  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc--aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataa 912  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||       ||||||| |||||| |||| ||||||||||||||||||    
T  11054360 aaaattgtttttaaatcttcctataaaacttttttccaaagaaaacac-aaaaaactatactccaaattcttatattttagttttcttaataa 11054269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 646 - 918
Target Start/End: Original strand, 2927189 - 2927462
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||||||||||||||  || ||||||||||||| |||||||||||||  |||||||||||||||||        ||||||||||||| |      ||||     
T  2927189 ctcattttctttgtcttaaaatataagcaaaaaagacaaacttttattatatttaatcttgtttttaaaaaaaatcatcttttccaataaaaacttttgc 2927288  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||| | ||||||| ||||||||||| |||||| || ||||| |||||| |  |||||||||||| ||| |||||| |||||||||||||| ||    
T  2927289 ttattctcatgaaattaaatacaaattacatttaattttctctctcttctatttttttcataaccaatagccaatgaaaattatttttacatcttcccat 2927388  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||| || | ||||||| ||       |||| || |||||| |||||||||||||||||||||||||||||    
T  2927389 aaaacttattccaaagaaaatacaaaaaaactatgctacaaattcttatgttttagttttcttaataaatgtga 2927462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 741 - 918
Target Start/End: Complemental strand, 54465024 - 54464848
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| || |||||| | ||| || |||||||||||| ||  |||||||||||||||||||    
T  54465024 tttgtttattctcataaaattaaacgcaaattacattcaattttctctctctttcactttttccataaccaatagccaacgaaaattgtttttacatctt 54464925  T
Q  841 cctataaaacttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||   |||||| ||||||||||        ||||||||||||| |||||||||||||||||||||||||||||    
T  54464924 cctataatttttttttaaagaaaacacaaaaaat-tatacttcaaattcttatgttttagttttcttaataaatgtga 54464848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 723 - 918
Target Start/End: Original strand, 36546520 - 36546714
Alignment:
Q  723 tcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatta 822  Q
    |||||| ||||||| || ||||||||||||||||| ||||||||||||||||||| |||| | || |||||| ||||| ||||||||||||||| ||| |    
T  36546520 tctttttcaagattctt-tttgtttattctcataaaattaaatgcaaattacattaaattctctctctctttcattttttctataaccaatagccaatga 36546618  T
Q  823 aaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||| |||||||||||||||| ||||||||| | ||||||| ||       |||||||  ||||||||||||||||||||||||||||| |||||    
T  36546619 aaattggttttacatcttcctatgaaactttttccaaagaaaatac-aaaaaactatactctaaatttttatgttttagttttcttaataagtgtga 36546714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 723 - 918
Target Start/End: Complemental strand, 36561795 - 36561601
Alignment:
Q  723 tcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatta 822  Q
    |||||| ||||||| || ||||||||||||||||| ||||||||||||||||||| |||| | || |||||| ||||| ||||||||||||||| ||| |    
T  36561795 tctttttcaagattctt-tttgtttattctcataaaattaaatgcaaattacattaaattctctctctctttcattttttctataaccaatagccaatga 36561697  T
Q  823 aaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||| |||||||||||||||| ||||||||| | ||||||| ||       |||||||  ||||||||||||||||||||||||||||| |||||    
T  36561696 aaattggttttacatcttcctatgaaactttttccaaagaaaatac-aaaaaactatactctaaatttttatgttttagttttcttaataagtgtga 36561601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 741 - 867
Target Start/End: Complemental strand, 579267 - 579140
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    |||||||| |||||||| |||||||||||||||||||||||||| || |||||| ||||| || |||||||||||| ||| ||||||||||||| |||||    
T  579267 tttgtttaatctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttatatctt 579168  T
Q  841 cctataaaacttttttc-aagaaaacac 867  Q
    ||||||||||||||||| ||||||||||    
T  579167 cctataaaacttttttcaaagaaaacac 579140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 646 - 918
Target Start/End: Original strand, 6074983 - 6075253
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||| ||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||        || |||||| |||||      |||||    
T  6074983 ctcattttcattgtcccaaaatataagcaaaaaagacaaacatttatcctatttaatcttgttttttttaaaa-tc-tctttttcaagaaaaacttttgt 6075080  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| |||||||||||||||||||||||||| || |||||| ||||| |  ||||||||| || ||| |||||||||||||| ||||||| |    
T  6075081 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttgcataaccaatggccaatgaaaattgtttttacttcttcctgt 6075180  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    || ||||||| | ||||||||||        |||||| |||||| ||||  ||||||||||||||||| |||||    
T  6075181 aacactttttccaaagaaaacacaaaaaat-tatactccaaattcttatactttagttttcttaataagtgtga 6075253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 647 - 918
Target Start/End: Complemental strand, 46711881 - 46711610
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntca-tcttttccaagatttttctttgt 745  Q
    |||||||||||||| ||| ||||||||| |||  ||||||||||||||||||||||||| || ||         |  ||||||||||||      |||||    
T  46711881 tcattttctttgtctcaaaatataagcataaaaaacaaacttttatcctatttaatctttttctttaaaaaaaactctcttttccaagaaaaacttttgt 46711782  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    ||||| |||||| ||||||| |||||||||||||| ||| || |||||| ||||| || |||||||||||| ||| || |||||||||||||||||||||    
T  46711781 ttattttcataaaattaaatacaaattacattcaaatttctctctctttcattttttc-ataaccaatagccaatgaatattgtttttacatcttcctat 46711683  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||| ||||||||||        |||||| |||||| ||||||||| ||||||||||||| |||||    
T  46711682 aaaacttttttcaaagaaaacacaaaaaat-tatactccaaattcttatgttttcgttttcttaataagtgtga 46711610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 725 - 918
Target Start/End: Complemental strand, 50782766 - 50782573
Alignment:
Q  725 ttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaa 824  Q
    |||||||| | |||| ||||||||||||| ||| |||||||| ||||||||||||||||| || || ||||||||| || ||||||||||| | | | |     
T  50782766 ttttccaataattttttttgtttattctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatag-tcaatgat 50782668  T
Q  825 attgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
     || ||||||||||||||||||||||||||| | |||||| |||       ||||||| |||||| |||||||||||||||||||||||||||||    
T  50782667 tttttttttacatcttcctataaaactttttccaaagaaagcacaaaaaaactatactccaaattcttatgttttagttttcttaataaatgtga 50782573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 30189546 - 30189743
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttct-ctataaccaatagctaat 820  Q
    |||||||| ||||||||| |||  |||||||| ||| |||||||| |||||||||||||| || ||  ||||| ||||| | | |||||||||||| |||    
T  30189546 atcttttctaagattttttttttgttattctcgtaaaattaaatgtaaattacattcaatattctctttctttcatttttttccataaccaatagccaat 30189645  T
Q  821 taaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
     |||||||||||||||||||||||||||||||||||| ||||||||||       ||||||| |||||| |||||||||| |||| ||||||| |||||    
T  30189646 gaaaattgtttttacatcttcctataaaacttttttcaaagaaaacac-aaaaaactatactccaaattcttatgttttaatttttttaataagtgtga 30189743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 734 - 918
Target Start/End: Original strand, 50730097 - 50730281
Alignment:
Q  734 atttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgttttt 833  Q
    |||||| ||||||||||||| ||| |||||||| ||||||||||||||||| || || ||||||||| || ||||||||||| | | | |  || |||||    
T  50730097 atttttttttgtttattctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatag-tcaatgatttttttttt 50730195  T
Q  834 acatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||||||| | |||||| |||       ||||||| |||||| |||||||||||||||||||||||||||||    
T  50730196 acatcttcctataaaactttttccaaagaaagcacaaaaaaactatactccaaattcttatgttttagttttcttaataaatgtga 50730281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 646 - 917
Target Start/End: Original strand, 19463975 - 19464248
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||||||||||  |||||| ||||||||| ||| ||||||||||||| ||||||||||||||||||           |||||| |||||      |||||    
T  19463975 ctcattttcttcatcccaaaatataagcagaaaagacaaacttttattctatttaatcttgtttttaaaaaaaaatctctttttcaagaaaaacttttgt 19464074  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    ||||||||||||  | ||||||||||||||||||| |||||| |||||| |||||  | ||||||||||   ||| ||||||||||||  ||||||||||    
T  19464075 ttattctcataaactgaaatgcaaattacattcaactttttctctctttcatttttcccataaccaataataaatgaaaattgtttttcaatcttcctat 19464174  T
Q  846 aaaacttttttc-aagaaaacac-nnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtg 917  Q
    |||||||||||| ||||||||||         |||||| |||||| ||||||||||||||| ||||||| ||||    
T  19464175 aaaacttttttcaaagaaaacacaaaaaactatatactccaaattcttatgttttagttttgttaataagtgtg 19464248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 666 - 918
Target Start/End: Original strand, 29235114 - 29235359
Alignment:
Q  666 atataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtttattctcataatattaaat 765  Q
    ||||||||||||| | |||||||||||||||||||||||| |||||        || ||||||||||||  ||| |||||||||| |||| | |||||||    
T  29235114 atataagcaaaaaaggcaaacttttatcctatttaatcttatttttttaaaaaatc-tcttttccaagaaatttttttgtttattatcattaaattaaat 29235212  T
Q  766 gcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaac-ttttttcaagaaaa 864  Q
    | |||||||||||||||      |||||| ||||| || |||||||||||| ||| |||||| ||||||||||||||||| |||| |||| | |||||||    
T  29235213 gtaaattacattcaatt------ctctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctattaaacgttttctaaagaaaa 29235306  T
Q  865 cacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
     ||       |||||||  ||||| ||||||||||||||||||||||| |||||    
T  29235307 tac-aaaaaactatactctaaattcttatgttttagttttcttaataagtgtga 29235359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 746 - 867
Target Start/End: Original strand, 3972275 - 3972396
Alignment:
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||| | ||||||||||||||||||||||||| ||| |||||  |||||||   ||||||||||||||| ||||||||||||||||||||| ||    
T  3972275 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcccat 3972374  T
Q  846 aaaacttttttcaagaaaacac 867  Q
    ||||||| ||  ||||||||||    
T  3972375 aaaacttattcaaagaaaacac 3972396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 746 - 867
Target Start/End: Complemental strand, 3997603 - 3997482
Alignment:
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||| | ||||||||||||||||||||||||| ||| |||||  |||||||   ||||||||||||||| ||||||||||||||||||||| ||    
T  3997603 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcccat 3997504  T
Q  846 aaaacttttttcaagaaaacac 867  Q
    ||||||| ||  ||||||||||    
T  3997503 aaaacttattcaaagaaaacac 3997482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 734 - 867
Target Start/End: Original strand, 53270221 - 53270357
Alignment:
Q  734 atttttctttgtttattctcataatattaaatgcaaattacattcaattt--tttcactcttttattttctctataaccaatagctaattaaaattgttt 831  Q
    |||||| ||||||||||||||||| ||||||| |||||||||||||||||  |||| |||||| ||||| || |||||||||||  ||| |||||| |||    
T  53270221 atttttttttgtttattctcataaaattaaatacaaattacattcaattttctttctctctttcattttttccataaccaataggcaatgaaaattattt 53270320  T
Q  832 ttacatcttcctataaaacttttttc-aagaaaacac 867  Q
    || |||||| |||| ||||||||||| ||||||||||    
T  53270321 tttcatctttctatgaaacttttttcaaagaaaacac 53270357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 742 - 918
Target Start/End: Original strand, 8703105 - 8703277
Alignment:
Q  742 ttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttc 841  Q
    |||||||||||||||| ||||||||||||||||||| |||||| |  |||||| ||||| || |||| ||||||| || | |||||||||||||||||||    
T  8703105 ttgtttattctcataaaattaaatgcaaattacattaaattttctttctctttcatttt-tccataatcaatagccaa-tgaaattgtttttacatcttc 8703202  T
Q  842 ctataaaacttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||  ||||| ||  |||||||       ||||||| |||||| ||||||||||||||| ||||||| |||||    
T  8703203 ctataaatttttttcca--aaaacacacaaaaactatactccaaattcttatgttttagtttttttaataagtgtga 8703277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 742 - 918
Target Start/End: Original strand, 9054992 - 9055164
Alignment:
Q  742 ttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttc 841  Q
    |||||||||||||||| ||||||||||||||||||| |||||| |  |||||| ||||| || |||| ||||||| || | |||||||||||||||||||    
T  9054992 ttgtttattctcataaaattaaatgcaaattacattaaattttctttctctttcatttt-tccataatcaatagccaa-tgaaattgtttttacatcttc 9055089  T
Q  842 ctataaaacttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||  ||||| ||  |||||||       ||||||| |||||| ||||||||||||||| ||||||| |||||    
T  9055090 ctataaatttttttcca--aaaacacacaaaaactatactccaaattcttatgttttagtttttttaataagtgtga 9055164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 646 - 850
Target Start/End: Complemental strand, 32620050 - 32619850
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaaga-tttttctttg 744  Q
    |||| ||||||||| |||| ||||||||||||| || ||||||    |||||||||||||||||||          || |||||||| | ||||| ||||    
T  32620050 ctcaatttctttgttccaaaatataagcaaaaa-gataaactt----cctatttaatcttgtttttaaaaatatatatattttccaatagtttttttttg 32619956  T
Q  745 tttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttccta 844  Q
    |||||||| |||| |||||||||||||||||||||||||| || || |   | |||||| |||||||||||| ||| |||||| ||||||||||||| ||    
T  32619955 tttattctaataaaattaaatgcaaattacattcaattttctctctatcccaatttctccataaccaatagccaatgaaaattatttttacatcttctta 32619856  T
Q  845 taaaac 850  Q
    ||||||    
T  32619855 taaaac 32619850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 745 - 912
Target Start/End: Complemental strand, 26725116 - 26724949
Alignment:
Q  745 tttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttccta 844  Q
    ||||||||||| | |||| |||||||||||||||| |||| || ||||| ||||||||| |||| ||||| | ||| ||||||||||||||||||||  |    
T  26725116 tttattctcatgaaattatatgcaaattacattcagttttatctctcttctattttctccataatcaataaccaatgaaaattgtttttacatcttctca 26725017  T
Q  845 taaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataa 912  Q
     ||||||| || | ||||||||||        ||||||||||||| |||| ||||||||||||||||||    
T  26725016 gaaaacttattccaaagaaaacacaaaaaat-tatacttcaaattcttatattttagttttcttaataa 26724949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 649 - 840
Target Start/End: Original strand, 6752571 - 6752764
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnnt--catcttttccaagatttttctttgtt 746  Q
    ||||||||||||| || || |||| ||||| |||||||||||||||||||||||||| |||||           |||||||| |||||      |||| |    
T  6752571 attttctttgtcctaaaatttaagtaaaaaagacaaacttttatcctatttaatcttttttttttttagaaaaccatctttttcaagaaaaacttttgct 6752670  T
Q  747 tattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    |||| |||| | ||||||||||||||||||||| |||  || |||||  |||||||| |||||||||||| |||||||||||||||||||||||    
T  6752671 tattttcatgaaattaaatgcaaattacattcattttcctctctcttccattttctccataaccaatagccaattaaaattgtttttacatctt 6752764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 655 - 803
Target Start/End: Original strand, 9263916 - 9264065
Alignment:
Q  655 tttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatctt-gtttttnnnnnnnntcatcttttccaagatttttctttgtttattctc 753  Q
    |||||||||| |||||||||||||  | ||| ||||||||||||||||||| |||||         ||||||||||||| | || | |||||||||||||    
T  9263916 tttgtcccaaaatataagcaaaaaaaataaatttttatcctatttaatcttagttttaaaaaaaaatcatcttttccaataattgtttttgtttattctc 9264015  T
Q  754 ataatattaaatgcaaattacattcaattttttcactcttttattttctc 803  Q
    |||| ||||||||||||||||||  |||||| || |||||| ||||||||    
T  9264016 ataaaattaaatgcaaattacatctaattttatctctctttcattttctc 9264065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 747 - 852
Target Start/End: Complemental strand, 20847391 - 20847286
Alignment:
Q  747 tattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctata 846  Q
    ||||||||||| ||||||||||||||||||||||||||| | |||||| |||||||| |||| ||||  | ||| ||||||||||  ||||||||||||     
T  20847391 tattctcataaaattaaatgcaaattacattcaatttttcctctctttcattttctccataatcaattaccaatgaaaattgtttgcacatcttcctatg 20847292  T
Q  847 aaactt 852  Q
    ||||||    
T  20847291 aaactt 20847286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 646 - 815
Target Start/End: Complemental strand, 33974782 - 33974614
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||| || |||||||||||||||||        || | ||||  ||||    | |||||    
T  33974782 ctcattttctttgtctcaaaatataagcaaaaaagacaaacttttttcatatttaatcttgttttttgaaaaaatc-tattttttaagaaagatttttgt 33974684  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatag 815  Q
    |||||||||||| ||||||||||||||||||| |||||| |  |||||| ||||| || |||||||||||    
T  33974683 ttattctcataaaattaaatgcaaattacattaaattttctttctctttcattttttccataaccaatag 33974614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 759 - 858
Target Start/End: Original strand, 34194895 - 34194994
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | |||||| |||  || |||||| |||||||| |||||||||| | ||| ||||||||||||||||||||||||||||||| |||||    
T  34194895 attaaatgcaaagtgcattcagtttgctctctctttcattttctcaataaccaataaccaatgaaaattgtttttacatcttcctataaaacttatttca 34194994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 741 - 918
Target Start/End: Complemental strand, 41476458 - 41476287
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| |  | |||| ||||| ||     ||  |||| ||| |||||| ||||||||||||    
T  41476458 tttgtttattctcataaaattaaatgcaaattagattcaattttctttccctttcattttttc-----cc--tagccaatgaaaattatttttacatctt 41476366  T
Q  841 cctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatg-ttttagttttcttaataaatgtga 918  Q
     |||||||||||||||| ||||||||||       ||||||| |||||||||||| |||||||||||||||||| |||||    
T  41476365 tctataaaacttttttcaaagaaaacac-aaaaaactatactccaaatttttatgtttttagttttcttaataagtgtga 41476287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 759 - 860
Target Start/End: Complemental strand, 8097129 - 8097028
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | ||||||||||  || |||||| |||||||| |||| ||||| | ||| |||||| |||||||||||||||||||||||| |||||    
T  8097129 attaaatgcaaagtgcattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttatttca 8097030  T
Q  859 ag 860  Q
    ||    
T  8097029 ag 8097028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 759 - 860
Target Start/End: Complemental strand, 30454835 - 30454735
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | ||||||||||  || |||||| |||||||| |||||||||| | ||| ||||||||||||||||||| ||||||||||| |||||    
T  30454835 attaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaat-aaaattgtttttacatctttctataaaacttatttca 30454737  T
Q  859 ag 860  Q
    ||    
T  30454736 ag 30454735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 751 - 852
Target Start/End: Complemental strand, 34722724 - 34722623
Alignment:
Q  751 ctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaac 850  Q
    ||||||| |||||||| ||||||||||||||||| || |  ||| ||||| |  |||||||||||| ||| |||||||||||||||||||| ||||||||    
T  34722724 ctcataaaattaaatgtaaattacattcaattttctctccttttcattttttgcataaccaatagccaatgaaaattgtttttacatcttcttataaaac 34722625  T
Q  851 tt 852  Q
    ||    
T  34722624 tt 34722623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 652 - 842
Target Start/End: Complemental strand, 47867132 - 47866941
Alignment:
Q  652 ttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnnt---catcttttccaagatttttctttgttta 748  Q
    |||||| |||||| || |||| ||||| |||||| |||||||||||||||||||||||||            ||| |||| ||||| |||  |||| |||    
T  47867132 ttctttatcccaaaatgtaagtaaaaaagacaaatttttatcctatttaatcttgtttttatttttaaaaaccatttttttcaagaattta-tttgctta 47867034  T
Q  749 ttctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcc 842  Q
    ||||||||| |||||||||||||||||||||||||| || |||||  | |||||| |||| ||||||| ||| ||||| |||||||||| ||||    
T  47867033 ttctcataa-attaaatgcaaattacattcaattttctctctcttccactttctccataatcaatagccaatgaaaatggtttttacatattcc 47866941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 762 - 862
Target Start/End: Complemental strand, 7886725 - 7886625
Alignment:
Q  762 aaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaaga 861  Q
    ||||||||| | ||||||||||  || |||||| |||||||| ||||| |||| | ||| ||||||||||||||||||| |||||||| || ||||||||    
T  7886725 aaatgcaaagtgcattcaatttgctctctctttcattttctcaataactaataaccaatgaaaattgtttttacatctttctataaaatttatttcaaga 7886626  T
Q  862 a 862  Q
    |    
T  7886625 a 7886625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 805 - 918
Target Start/End: Original strand, 9264610 - 9264723
Alignment:
Q  805 ataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttt 903  Q
    ||||| |||||| ||| |||||||||||||||||||| ||||||||||||||| ||||||||||       |||||||  |||||  |||||||||||||    
T  9264610 ataacgaatagccaatgaaaattgtttttacatcttcatataaaacttttttcaaagaaaacac-aaaaaactatactcaaaattcatatgttttagttt 9264708  T
Q  904 tcttaataaatgtga 918  Q
    ||||||||| |||||    
T  9264709 tcttaataagtgtga 9264723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 722 - 918
Target Start/End: Complemental strand, 23910642 - 23910465
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||| |||||||||| ||||||||||||||||  |||||||||||||||||||||||||                  || |||||||||||| |||     
T  23910642 atctttttcaagattttt-tttgtttattctcatataattaaatgcaaattacattcaattt------------------tccataaccaatagccaatg 23910562  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||| ||||||||||||||||||||||||||| | ||||||||||       |||||||  ||||| |||||||||| |||||||||||| |||||    
T  23910561 aaaattatttttacatcttcctataaaactttttacaaagaaaacac-aaaaagctatactctaaattcttatgttttaattttcttaataagtgtga 23910465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 763 - 860
Target Start/End: Complemental strand, 16033094 - 16032997
Alignment:
Q  763 aatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaag 860  Q
    |||||||| | ||||||||||  |  |||||| ||||| || ||||| |||| | ||| ||||||||||||||||||||||||||||||| |||||||    
T  16033094 aatgcaaagtgcattcaatttgctttctctttcattttttcaataactaataaccaatgaaaattgtttttacatcttcctataaaacttatttcaag 16032997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 31836854 - 31836918
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||| |||||||||| || ||||||||||  |||||||||||||||||||||||||||||||    
T  31836854 ctcatttt-tttgtcccaaaatgtaagcaaaaaatacaaacttttatcctatttaatcttgttttt 31836918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 735 - 800
Target Start/End: Complemental strand, 48802615 - 48802550
Alignment:
Q  735 tttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttatttt 800  Q
    ||||| ||||||||||||||||| | |||||||||||||||||||||||| || |||||| |||||    
T  48802615 tttttttttgtttattctcataaaagtaaatgcaaattacattcaattttctctctctttcatttt 48802550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 759 - 859
Target Start/End: Original strand, 10014276 - 10014376
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||| ||||| | ||||||||||  ||  | ||||||||||||||||| |||   | ||| ||||||||||||||||||||||||||||||| |||||    
T  10014276 attaaaagcaaagtgcattcaatttactctattttttattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttca 10014375  T
Q  859 a 859  Q
    |    
T  10014376 a 10014376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 759 - 859
Target Start/End: Original strand, 21214248 - 21214348
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | ||||||||||  || || |||||||||||| |||| |||   | ||| ||||||||||||||||||| ||||||||||| |||||    
T  21214248 attaaatgcaaagtgcattcaatttgctctcttttttattttctcaataatcaactaccaatgaaaattgtttttacatctttctataaaacttatttca 21214347  T
Q  859 a 859  Q
    |    
T  21214348 a 21214348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 759 - 859
Target Start/End: Complemental strand, 22456119 - 22456019
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | ||||||||||  || || ||| ||||||||||||| |||   | ||| ||||||||||||| ||||||||||||||||| |||||    
T  22456119 attaaatgcaaaatgcattcaatttgctctctttttcattttctctataatcaactaccaatcaaaattgtttttatatcttcctataaaacttatttca 22456020  T
Q  859 a 859  Q
    |    
T  22456019 a 22456019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 759 - 859
Target Start/End: Complemental strand, 22479165 - 22479065
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | ||||||||||  || || ||| ||||||||||||| |||   | ||| |||| |||||||||||||||||||||||||| |||||    
T  22479165 attaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaagtgtttttacatcttcctataaaacttatttca 22479066  T
Q  859 a 859  Q
    |    
T  22479065 a 22479065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 647 - 711
Target Start/End: Complemental strand, 22479257 - 22479193
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    ||||||||||||||||||  |||||||||||| |||||||||||||| ||||||||  |||||||    
T  22479257 tcattttctttgtcccaaattataagcaaaaaagacaaacttttatcatatttaattatgttttt 22479193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 741 - 918
Target Start/End: Original strand, 26208009 - 26208186
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    |||| ||||||||||||  | |||||| |||||||||||||||| ||  ||||  |||||||| | ||  |||||| ||| |||||||||||||||||||    
T  26208009 tttgcttattctcataaattcaaatgccaattacattcaattttctctttcttccattttctccacaataaatagccaatgaaaattgtttttacatctt 26208108  T
Q  841 cctataaaacttttttca-agaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
     | || |||||| || || | |||||||       |||||||  ||||| ||||||||||||||||||||||| |||||    
T  26208109 accatgaaacttattccagacaaaacac-aaaaaactatactctaaattcttatgttttagttttcttaataagtgtga 26208186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 646 - 834
Target Start/End: Complemental strand, 46557425 - 46557237
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||||||||||||||  || ||||||| ||||| |||||| |||||| ||||||||  ||||||||        |||| |||||||| |      ||||     
T  46557425 ctcattttctttgtcttaaaatataagtaaaaaagacaaatttttattctatttaactttgtttttaaaaaaaatcatattttccaataaaaacttttgc 46557326  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgttttta 834  Q
    |||||||||| | |||||||| |||||||||| |||||| || |||||| ||||| || ||||| |||||| ||| |||||| ||||||    
T  46557325 ttattctcatgaaattaaatgtaaattacatttaattttctctctctttcattttttccataactaatagccaatgaaaattattttta 46557237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 648 - 711
Target Start/End: Complemental strand, 2994620 - 2994557
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||||||  |||||| |||||||||||||||||||| ||||||||  |||||||    
T  2994620 cattttctttgtcccaaattataagaaaaaatgacaaacttttatcgtatttaattatgttttt 2994557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 646 - 709
Target Start/End: Complemental strand, 8764884 - 8764821
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttt 709  Q
    |||| ||| |||||| ||| || |||||||||| ||||||||||||||||||||||||||||||    
T  8764884 ctcaatttttttgtcgcaaaatttaagcaaaaaagacaaacttttatcctatttaatcttgttt 8764821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 759 - 862
Target Start/End: Complemental strand, 23209391 - 23209288
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||||| |||||| | | ||| | |||| ||||||||| |||| |||| | ||| |||||| ||||| |||||| ||||||||||| |||||    
T  23209391 attaaatgcaaattgcattcattatgttctccctttcattttctctctaactaataaccaataaaaattattttttcatctttctataaaacttatttca 23209292  T
Q  859 agaa 862  Q
    ||||    
T  23209291 agaa 23209288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 789 - 852
Target Start/End: Complemental strand, 46918294 - 46918231
Alignment:
Q  789 ctcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt 852  Q
    |||||| |||||||| |||||||||| | ||| ||||||||||||| |||||||||||||||||    
T  46918294 ctctttcattttctcaataaccaataaccaatgaaaattgtttttagatcttcctataaaactt 46918231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 11054498 - 11054453
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  11054498 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 11054453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 796 - 918
Target Start/End: Original strand, 31836969 - 31837091
Alignment:
Q  796 attttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatg 894  Q
    |||||||| | |||||||||  ||| |||||||||||| ||| ||||||||||||||||| | ||||||| ||       ||||||| ||| || |||||    
T  31836969 attttctccacaaccaatagtcaatgaaaattgtttttgcatattcctataaaactttttccaaagaaaatac-aaaaaactatactccaacttcttatg 31837067  T
Q  895 ttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||| |||||    
T  31837068 ttttagttttcttaataagtgtga 31837091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 646 - 711
Target Start/End: Complemental strand, 54465114 - 54465049
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||||| || ||||||||||||| || ||| ||||||| ||||||||||| |||||    
T  54465114 ctcattttctttgtcctaaaatataagcaaaaaagataaatttttatcttatttaatctttttttt 54465049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 759 - 859
Target Start/End: Original strand, 10114918 - 10115018
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||| ||||| | ||||||||||  ||  | ||| ||||||||||||| |||   | ||| ||||||||||||||||||||||||||||||| |||||    
T  10114918 attaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttca 10115017  T
Q  859 a 859  Q
    |    
T  10115018 a 10115018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 759 - 859
Target Start/End: Original strand, 10252018 - 10252118
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||| ||||| | ||||||||||  ||  | ||| ||||||||||||| |||   | ||| ||||||||||||||||||||||||||||||| |||||    
T  10252018 attaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttca 10252117  T
Q  859 a 859  Q
    |    
T  10252118 a 10252118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 759 - 859
Target Start/End: Original strand, 38401387 - 38401487
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| |||||| |||||| || || ||| |||||||||||||  ||   | ||| |||||| ||||||||||| |||||||||||| |||||    
T  38401387 attaaatgcaaagtacatttaattttctctctttttcattttctctataattaactaccaatgaaaattatttttacatctccctataaaacttatttca 38401486  T
Q  859 a 859  Q
    |    
T  38401487 a 38401487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 646 - 709
Target Start/End: Complemental strand, 8769784 - 8769722
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttt 709  Q
    |||| |||||||||| ||| || |||| ||||| ||||||||||||||||||||||||||||||    
T  8769784 ctcaatttctttgtcgcaaaatgtaagaaaaaa-gacaaacttttatcctatttaatcttgttt 8769722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 36546476 - 36546518
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaactttt 690  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  36546476 cattttctttgtcccaaaatataagcaaaaaagacaaactttt 36546518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 36561839 - 36561797
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaactttt 690  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  36561839 cattttctttgtcccaaaatataagcaaaaaagacaaactttt 36561797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 661 - 711
Target Start/End: Original strand, 51311587 - 51311637
Alignment:
Q  661 ccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||| ||||||| ||||| |||||| |||||||||||||||||||||||||    
T  51311587 ccaaaatataagtaaaaaagacaaatttttatcctatttaatcttgttttt 51311637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 646 - 711
Target Start/End: Complemental strand, 22456212 - 22456147
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||| ||||||  |||||||||||| ||| |||||||||| ||||||||  |||||||    
T  22456212 ctcattttctttatcccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttt 22456147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 23311783 - 23311738
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||||    
T  23311783 cattttctttgtcccaaaatataagcaaaaaagtcaaacttttatc 23311738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 759 - 860
Target Start/End: Original strand, 31126218 - 31126319
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||||| |||||||||| ||| |  |||||||||||| ||||    || | ||| |||||| |||||||||||| | ||||||||| |||||    
T  31126218 attaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccataaaacttatttca 31126317  T
Q  859 ag 860  Q
    ||    
T  31126318 ag 31126319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 38401294 - 38401359
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||||||||  |||||||||||| ||  |||||||||| ||||||||  |||||||    
T  38401294 ctcattttctttgtcccaaattataagcaaaaaagatcaacttttatcatatttaattatgttttt 38401359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 746 - 835
Target Start/End: Original strand, 38674870 - 38674959
Alignment:
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttac 835  Q
    ||||||| || | ||||||| ||||||| |||||||||| || |||||| |||||||  |||| ||||||  ||| ||||||||||||||    
T  38674870 ttattcttatgaaattaaatacaaattagattcaattttctctctctttcattttcttcataatcaatagtcaatgaaaattgtttttac 38674959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 646 - 711
Target Start/End: Complemental strand, 41476551 - 41476487
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||| |||||||||| ||||||  ||||| ||||||||||||||||| |||||||| |||||    
T  41476551 ctcattttgtttgtcccaaaatataataaaaaa-gacaaacttttatcctaattaatcttattttt 41476487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 826 - 862
Target Start/End: Original strand, 17587779 - 17587815
Alignment:
Q  826 ttgtttttacatcttcctataaaacttttttcaagaa 862  Q
    ||||||||||||||||||||||||||| |||||||||    
T  17587779 ttgtttttacatcttcctataaaacttatttcaagaa 17587815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 822 - 918
Target Start/End: Complemental strand, 33973615 - 33973518
Alignment:
Q  822 aaaattgtttttacatcttcctataaaacttttttcaa-gaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||| |||| || |||| ||||||||||||||| || ||||||||       ||||||| ||||||||||| |||||||||| ||||||| |||||    
T  33973615 aaaattattttgacgtctttctataaaactttttttaaagaaaacacaaaaaaactatactccaaatttttatattttagttttgttaataagtgtga 33973518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 759 - 862
Target Start/End: Original strand, 53020189 - 53020292
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||||| |||||||||| ||| |  |||||||||||| ||||    || ||||| | |||| |||||||||||| | ||||||||| || ||    
T  53020189 attaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaactaatgagaattatttttacatctttccataaaacttattcca 53020288  T
Q  859 agaa 862  Q
    ||||    
T  53020289 agaa 53020292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 759 - 852
Target Start/End: Complemental strand, 54725714 - 54725628
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt 852  Q
    ||||||| |||| | ||||||||||  || || |||||||||||| |||||||||        |||||||||||||||||||||||||||||||    
T  54725714 attaaatacaaagtgcattcaatttgctctcttttttattttctcaataaccaatg-------aaaattgtttttacatcttcctataaaactt 54725628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 653 - 711
Target Start/End: Original strand, 3972174 - 3972232
Alignment:
Q  653 tctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||| || |||||||||| || ||||||||||   ||||||||||||||||    
T  3972174 tctttgtcccaaaatgtaagcaaaaaagataaacttttatttcatttaatcttgttttt 3972232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 653 - 711
Target Start/End: Complemental strand, 3997704 - 3997646
Alignment:
Q  653 tctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||| || |||||||||| || ||||||||||   ||||||||||||||||    
T  3997704 tctttgtcccaaaatgtaagcaaaaaagataaacttttatttcatttaatcttgttttt 3997646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 655 - 705
Target Start/End: Original strand, 50730016 - 50730066
Alignment:
Q  655 tttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatctt 705  Q
    |||||||||| ||||||| ||||| || ||| |||||||||||||||||||    
T  50730016 tttgtcccaaaatataagtaaaaaagataaatttttatcctatttaatctt 50730066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 655 - 705
Target Start/End: Complemental strand, 50782836 - 50782786
Alignment:
Q  655 tttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatctt 705  Q
    |||||||||| ||||||| ||||| || ||| |||||||||||||||||||    
T  50782836 tttgtcccaaaatataagtaaaaaagataaatttttatcctatttaatctt 50782786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 650 - 711
Target Start/End: Original strand, 8703016 - 8703076
Alignment:
Q  650 ttttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||||  |||||| |||||  ||||  |||||||||||||||||||||||||    
T  8703016 ttttctttgtcccaaattataagaaaaaaa-acaatattttatcctatttaatcttgttttt 8703076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 650 - 711
Target Start/End: Original strand, 9054903 - 9054963
Alignment:
Q  650 ttttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||||  |||||| |||||  ||||  |||||||||||||||||||||||||    
T  9054903 ttttctttgtcccaaattataagaaaaaaa-acaatattttatcctatttaatcttgttttt 9054963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 649 - 698
Target Start/End: Complemental strand, 16739358 - 16739309
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatt 698  Q
    |||||||||||| ||| ||||||||||||| ||| ||||||||| |||||    
T  16739358 attttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 16739309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 21214155 - 21214220
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||||||||  |||||||||||| ||  ||||||||||  |||||||  |||||||    
T  21214155 ctcattttctttgtcccaaattataagcaaaaaagatcaacttttatcacatttaattatgttttt 21214220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 860
Target Start/End: Original strand, 21654251 - 21654352
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||||| |||||||||| ||| |  |||||||||||| ||||    || | ||| |||||| |||||||||||| | || |||||| |||||    
T  21654251 attaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaacaaatgaaaattatttttacatctttccatgaaacttatttca 21654350  T
Q  859 ag 860  Q
    ||    
T  21654351 ag 21654352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 23910685 - 23910640
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    |||||| |||||||||| ||||||||||||| |||||| |||||||    
T  23910685 cattttttttgtcccaaaatataagcaaaaaagacaaatttttatc 23910640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 751 - 784
Target Start/End: Original strand, 34722564 - 34722597
Alignment:
Q  751 ctcataatattaaatgcaaattacattcaatttt 784  Q
    ||||||| ||||||||||||||||||||||||||    
T  34722564 ctcataaaattaaatgcaaattacattcaatttt 34722597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 699
Target Start/End: Complemental strand, 45347874 - 45347821
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctattt 699  Q
    ||||||||||||||| ||| ||||||||||||| ||  ||||||||| ||||||    
T  45347874 ctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatactattt 45347821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 699
Target Start/End: Original strand, 45781311 - 45781364
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctattt 699  Q
    ||||||||||||||| ||| ||||||||||||| ||  ||||||||| ||||||    
T  45781311 ctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattt 45781364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 49583879 - 49583944
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||| | ||||||||  |||||||||||| ||| |||||||||| ||||||||  |||||||    
T  49583879 ctcattttttctgtcccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttt 49583944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 808
Target Start/End: Original strand, 55400744 - 55400793
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataa 808  Q
    |||||||||||||| |||||||||| |||||  |||||||||||| ||||    
T  55400744 attaaatgcaaattgcattcaatttgttcacctttttattttctccataa 55400793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 2e-61; HSPs: 88)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 646 - 918
Target Start/End: Complemental strand, 15959904 - 15959633
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||||| |||||||||||||||||        || | ||||||||||      |||||    
T  15959904 ctcattttctttgtcccaaaatataagcaaaaaagacaaatttttatcttatttaatcttgtttttttaaaaaatctt-ttttccaagaaaaacttttgt 15959806  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| |||||||||||||||||||||||||| || |||||| ||||| || |||||||||||| ||| ||||||||||||||||||||||||    
T  15959805 ttattctcataaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 15959706  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||| ||||||||||        |||||| |||||| |||||||||||||||||||||||||||||    
T  15959705 aaaacttttttcaaagaaaacacaaaaaat-tatactccaaattcttatgttttagttttcttaataaatgtga 15959633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 646 - 918
Target Start/End: Complemental strand, 28017008 - 28016739
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||        || ||||||||||||      |||||    
T  28017008 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgttttttaaaaaaatc-tcttttccaagaaaaacttttgt 28016910  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| ||||||||||| |||||||||||||| ||  ||||||||||| | ||||||||||||| ||| ||||||||||||||||||||||||    
T  28016909 ttattctcataaaattaaatgcaagttacattcaattttctc--tcttttattttttttataaccaatagccaatgaaaattgtttttacatcttcctat 28016812  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||| |||||| ||||||||||       |||||||  ||||| ||||||||||||||||||||||| |||||    
T  28016811 aaaacatttttcaaagaaaacac-caaaaactatactctaaattcttatgttttagttttcttaataagtgtga 28016739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 722 - 918
Target Start/End: Complemental strand, 32624194 - 32623998
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||||| ||||| || ||||||||| || |||     
T  32624194 atcttttccaagatttttttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatggccaatg 32624095  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||       ||| ||| |||||| ||||||||||||||||||||||| |||||    
T  32624094 aaaattgtttttacatcttcctataaaacttttttcaaagaaaacac-aaaaaactacactccaaattcttatgttttagttttcttaataattgtga 32623998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 646 - 918
Target Start/End: Original strand, 33369450 - 33369718
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||||||||||||||| |  ||||||||||||| ||||| ||||||||||||||||||||||||||        || ||||||||||||      |||||    
T  33369450 ctcattttctttgtcctagaatataagcaaaaaagacaagcttttatcctatttaatcttgtttttaaaaaaaatc-tcttttccaagaaaaacttttgt 33369548  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| ||||||||||||||||||||||  ||||| |||||| ||||| || |||||||||||| ||| ||||||||||||||||| || |||    
T  33369549 ttattctcataaaattaaatgcaaattacattcaa--ttttctctctttcattttttccataaccaatagccaatgaaaattgtttttacatc-tcatat 33369645  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||| | ||||||||||       ||||||| |||||||||||||||||||||||||||||| |||||    
T  33369646 aaaactttttccaaagaaaacac-aaaaaactatactccaaatttttatgttttagttttcttaataagtgtga 33369718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 646 - 918
Target Start/End: Original strand, 6786734 - 6787006
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||           ||||||||||||      |||||    
T  6786734 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctctttaatcttgtttttttaaaaaaatctcttttccaagaaaaacttttgt 6786833  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| |||||||||||| |||||||||||||  | |||||| ||||| || |||||||||||| ||| |||||||| ||||||||||| |||    
T  6786834 ttattctcataaaattaaatgcaaactacattcaattttcactctctttcattttttccataaccaatagccaatgaaaattgtgtttacatcttcatat 6786933  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||| | ||||||||||       ||||||| |||||| | ||||||||||||||||||||| |||||    
T  6786934 aaaactttttccaaagaaaacac-aaaaaactatactccaaattctcatgttttagttttcttaataagtgtga 6787006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 722 - 918
Target Start/End: Complemental strand, 39555774 - 39555579
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| || || |||||| ||||| || |||||||||||| |||     
T  39555774 atcttttccaagattttt-tttgtttattctcataaaattaaatgcaaattacattcaatgttctctctctttcattttttccataaccaatagccaatg 39555676  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||       ||||||| |||||| |||||||||| |||||||||||| |||||    
T  39555675 aaaattgtttttacatctttctataaaacttttttcaaagaaaacac-aaaaacctatactccaaattcttatgttttaattttcttaataagtgtga 39555579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 646 - 917
Target Start/End: Original strand, 6785353 - 6785622
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||| ||| ||||||||||||| || |||||||||||||||||||||||||||||        || ||||||||||||      |||||    
T  6785353 ctcattttctttgtcacaaaatataagcaaaaaagataaacttttatcctatttaatcttgtttttaaaaaaaatc-tcttttccaagaaaaacttttgt 6785451  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| |||||||||||| ||||||||||||| || |||||| ||||| || |||||||||||| ||| |||||||||||||||||||| |||    
T  6785452 ttattctcataaaattaaatgcaaactacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcatat 6785551  T
Q  846 aaaacttttt-tcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtg 917  Q
    ||||||||||   ||||||||||       |||||| || |||| ||||||||||||||||||||||| ||||    
T  6785552 aaaactttttcaaaagaaaacac-aaaaaactatac-tccaattcttatgttttagttttcttaataagtgtg 6785622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 722 - 867
Target Start/End: Complemental strand, 12449155 - 12449010
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||||| ||||| || ||||||||| || |||     
T  12449155 atcttttccaagattttt-tttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttgattttttccataaccaatggccaatg 12449057  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacac 867  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  12449056 aaaattgtttttacatcttcctataaaacttttttcaaagaaaacac 12449010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 646 - 912
Target Start/End: Original strand, 1820312 - 1820577
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||||||||||| ||| || ||||||| ||||| ||||||||||||||||||||||| ||||||||        || ||||| |||| |     ||||||    
T  1820312 ctcattttctttatcctaaaatataagtaaaaaagacaaacttttatcctatttaattttgtttttttaaaaaatc-tctttcccaaaaaagacctttgt 1820410  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| |  |||||||| ||||||| || ||| |||||||||||||||||    
T  1820411 ttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataaccaaaagctaatgaatatt-tttttacatcttcctat 1820509  T
Q  846 aaaacttttttcaagaaaa-cacnnnnnnnctatacttcaaatttttatgttttagttttcttaataa 912  Q
    |||||||||| ||| |||| |||       ||||| | |||||| |||||||||||||||||||||||    
T  1820510 aaaactttttccaaaaaaagcacaataaaactatattccaaattcttatgttttagttttcttaataa 1820577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 646 - 859
Target Start/End: Original strand, 16854032 - 16854249
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatga---caaacttttatcctatttaatcttgtttttnnnnnnnn--tcatcttttccaagatttttc 740  Q
    ||||||||||||||||||| |||||||||||||  |   ||||||||||||||||||||||||| ||||          ||||||||||||| | || |     
T  16854032 ctcattttctttgtcccaaaatataagcaaaaaaaaaaacaaacttttatcctatttaatcttggttttaaaaaaaaaatcatcttttccaataattgtt 16854131  T
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||| || |||||| |||||||| |||||||||||| ||| ||||||||||||||| |||    
T  16854132 tttgttt-ttctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaataaaaattgtttttacacctt 16854230  T
Q  841 cctataaaacttttttcaa 859  Q
    || ||||||||||||||||    
T  16854231 ccaataaaacttttttcaa 16854249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 666 - 918
Target Start/End: Original strand, 45226054 - 45226306
Alignment:
Q  666 atataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtttattctcataatattaaat 765  Q
    ||||||||||||| || |||||||||||||||||||||||||||||           ||||||||||||      ||||||||||||||||| |||||||    
T  45226054 atataagcaaaaaagataaacttttatcctatttaatcttgttttttaaaaaaaatctcttttccaagaaaaacttttgtttattctcataaaattaaat 45226153  T
Q  766 gcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttc-aagaaaa 864  Q
    ||||||||||||||||||| |  |||||| ||||| || |||||||||||  ||| |||||||||||||| ||||||||||||||||||||| |||||||    
T  45226154 gcaaattacattcaattttctatctctttcattttttccataaccaatagtcaatgaaaattgtttttacgtcttcctataaaacttttttcaaagaaaa 45226253  T
Q  865 cacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
     ||       |||||||  ||||| ||||||||||||||||||||||| |||||    
T  45226254 tac-ataaaactatactctaaattattatgttttagttttcttaataagtgtga 45226306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 735 - 918
Target Start/End: Original strand, 2126023 - 2126206
Alignment:
Q  735 tttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgttttta 834  Q
    ||||| |||||| |||||||| | |||||||||||||||||||||||||| ||  ||||| ||||| || |||||||||||| ||| |||||||||||||    
T  2126023 tttttttttgttcattctcattaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgttttta 2126122  T
Q  835 catcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||||||||||||||| | ||||||||||       ||||| | |||||| |||||||||||||||||||||||||||||    
T  2126123 catcttcctataaaactttttccaaagaaaacac-aaaaaactatattccaaattcttatgttttagttttcttaataaatgtga 2126206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 725 - 912
Target Start/End: Complemental strand, 42965998 - 42965815
Alignment:
Q  725 ttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaa 824  Q
    |||| ||||||||||  ||||||||||| |||| |||||||||||||||||||||||||| || |||||| ||||| || |||||||||||| ||| |||    
T  42965998 tttttcaagattttt--ttgtttattcttataaaattaaatgcaaattacattcaattttctctctctttcatttt-tccataaccaatagccaatgaaa 42965902  T
Q  825 attgtttttacatcttcctataaaacttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataa 912  Q
    ||||||||||||||||||||||||| ||||   ||||||||||       ||| ||||||||||||||||||||||||||||||||||    
T  42965901 attgtttttacatcttcctataaaatttttccaaagaaaacac-aaaaaactaaacttcaaatttttatgttttagttttcttaataa 42965815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 646 - 912
Target Start/End: Complemental strand, 7468217 - 7467961
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||           |||||| ||||       |||||    
T  7468217 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgttttt-----------tctttttcaagcaaaacttttgt 7468129  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactctttta-ttttctctataaccaatagctaattaaaattgtttttacatcttccta 844  Q
    |||||||||||| |||||||||||||||||||||||||| |  |||||| | |||||||| ||| ||||||| ||| |||||||| |||||||||||||     
T  7468128 ttattctcataaaattaaatgcaaattacattcaattttctatctctttcatttttctct-taatcaatagccaatgaaaattgtatttacatcttcctt 7468030  T
Q  845 taaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataa 912  Q
    ||||||||||| | ||||||||||          ||||||||||| |||||||||||||||||||||||    
T  7468029 taaaactttttccaaagaaaacacaaaaaattattacttcaaattcttatgttttagttttcttaataa 7467961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 736 - 918
Target Start/End: Original strand, 40718664 - 40718846
Alignment:
Q  736 ttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttac 835  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| ||||| ||||||||| ||| |||||||||| |||    
T  40718664 ttttctttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttctattaccaatagccaatgaaaattgtttctac 40718763  T
Q  836 atcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    | |||| ||||||||||||||| ||||||||||       ||||||| ||||||||||| ||||||||||| |||||| |||||    
T  40718764 aacttcatataaaacttttttcaaagaaaacac-aaaaaactatactccaaatttttatattttagttttcgtaataagtgtga 40718846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 24190443 - 24190637
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||||||||||| |||||| ||  ||||| ||||| || |||||||||||| |||     
T  24190443 atcttttccaagatttttttttgtt-attctcataaaattaaatgcaaattacatt-aattttctctttctttcattttttccataaccaatagccaatg 24190540  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||| | ||||||||||||| | ||||||||||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  24190541 aaaattgtttttacatctccgtataaaactttttccaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 24190637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 741 - 918
Target Start/End: Complemental strand, 32983340 - 32983165
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| || |||||| ||||| || ||||||||| || ||| |||||||||||||||||||    
T  32983340 tttgtttattctcataaaattaaatgcaaattatattcaattttctctctctttcattttttccataaccaat-gccaatgaaaattgtttttacatctt 32983242  T
Q  841 cctataaaacttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    | ||||||||||||   ||||||||||       ||||||||| |||||||||||||||||||||||||||| |||||    
T  32983241 cttataaaacttttccaaagaaaacac-aaaaaactatacttccaatttttatgttttagttttcttaataagtgtga 32983165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 647 - 856
Target Start/End: Original strand, 33431458 - 33431665
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtt 746  Q
    ||||||||||||| |||| ||||||| ||||| |||||| |||| ||| ||||||||||||||||        |||||||||||||||      ||||||    
T  33431458 tcattttctttgttccaaaatataagtaaaaaagacaaaattttctcccatttaatcttgtttttaaaaaaaatcatcttttccaagaaaaacttttgtt 33431557  T
Q  747 tattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctata 846  Q
    ||||||||||| || |||| ||||||||||| |||||| ||  ||||| ||||||||||||||||||||| ||| |||||||||||| |||| |||||||    
T  33431558 tattctcataaaatgaaatacaaattacatttaattttctc--tctttcattttctctataaccaatagccaatgaaaattgtttttccatcctcctata 33431655  T
Q  847 aaactttttt 856  Q
    ||||||||||    
T  33431656 aaactttttt 33431665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 646 - 914
Target Start/End: Original strand, 46542878 - 46543146
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaat-gacaaacttttatcctatttaatcttgtttttnnnnnnnntcatctttt-ccaagatttttcttt 743  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||| ||||||||||| ||||||||        |||| |||| ||||||      |||    
T  46542878 ctcattttctttgtcccaaaatataagcaaaaaaagacaaacttttctcctatttaattttgtttttaaaaaaaatcatttttttccaagaaaaactttt 46542977  T
Q  744 gtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcct 843  Q
    |||||||||||||| |||||||||||||| |||| |||||| ||  ||||| |||||||| | |||||||||| |||  ||||||||||| |||||||||    
T  46542978 gtttattctcataaaattaaatgcaaattgcatttaattttctc--tctttcattttctccacaaccaatagccaatggaaattgttttttcatcttcct 46543075  T
Q  844 ataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaat 914  Q
    |||||  ||||||| ||||||||||       ||||||| |||||||||||||||||||||| |||||||||    
T  46543076 ataaattttttttcaaagaaaacac-aaaaaactatactccaaatttttatgttttagtttttttaataaat 46543146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 35691364 - 35691560
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactctttta-ttttctctataaccaatagctaat 820  Q
    ||||||| |||||||||| |||  |||||||||||| |||||||||||||||||||||||||| ||  ||||| | |||| || |||||||||||| |||    
T  35691364 atctttttcaagattttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttttccataaccaatagccaat 35691463  T
Q  821 taaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
     |||||||||||||||||| ||||||||||||||||| ||||||||||        |||||| |||||| ||||||||||| |||||||||||||||||    
T  35691464 aaaaattgtttttacatctccctataaaacttttttcaaagaaaacacaaaaaat-tatactccaaattcttatgttttag-tttcttaataaatgtga 35691560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 722 - 918
Target Start/End: Complemental strand, 43667488 - 43667296
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||| ||||||||||  |||||||||||||||| |||||||| ||||||||||||||||| ||  ||||| ||||| || ||||||||| || |||     
T  43667488 atctttttcaagattttt--ttgtttattctcataaaattaaatgtaaattacattcaattttctc--tctttcattttttccataaccaatggccaatg 43667393  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||        ||||||| ||||| |||||| ||| ||||||||||||||||||    
T  43667392 aaaattgtttttacgtcttcctataaaacttttttcaaagaaaacacaaaaaat-tatactttaaattcttatgtcttaattttcttaataaatgtga 43667296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 646 - 856
Target Start/End: Complemental strand, 47600304 - 47600094
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||||||||||||||| ||  |||||| ||||| |||||| ||||||||||||||||||| |||||           ||||||||||||      |||||    
T  47600304 ctcattttctttgtccgaaagtataagtaaaaaagacaaatttttatcctatttaatcttatttttaaaaaaaaatctcttttccaagaaaaacttttgt 47600205  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| |||||||||||||||||||||||||| |  |||||| ||||| |  |||| ||||||| ||| ||||||||||||||||||||||||    
T  47600204 ttattctcataaaattaaatgcaaattacattcaattttctttctctttcatttttttcataaacaatagccaatgaaaattgtttttacatcttcctat 47600105  T
Q  846 aaaactttttt 856  Q
    |||||||||||    
T  47600104 aaaactttttt 47600094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 669 - 849
Target Start/End: Complemental strand, 10558998 - 10558818
Alignment:
Q  669 taagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtttattctcataatattaaatgca 768  Q
    |||||||||| |||||| |||||||| |||||||||||||| |         ||||||||||||||||||| ||||  ||||||||| | |||||||| |    
T  10558998 taagcaaaaaagacaaatttttatccaatttaatcttgtttctttaaaaagccatcttttccaagatttttttttgcatattctcatgaaattaaatgta 10558899  T
Q  769 aattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaa 849  Q
    ||||||||| ||||||||| |||||  |||||||| |||| ||||||| ||| ||||||||||||||||||||| ||||||    
T  10558898 aattacattaaattttttctctcttccattttctccataatcaatagccaatgaaaattgtttttacatcttcccataaaa 10558818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 646 - 867
Target Start/End: Complemental strand, 2246277 - 2246057
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||| ||| ||| |||||| || |||||||||| ||||||  || |||||||||||||||||||||         |||||||||||||| |||| |||||    
T  2246277 ctcaatttttttatcccaaaatgtaagcaaaaaagacaaaaattcatcctatttaatcttgtttttaaaaaaa--catcttttccaagaattttatttgt 2246180  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| ||||||||||||||||||| |||||| || |||||  | |||| | | ||| |||||| ||| |||||| ||||||||| |||||||    
T  2246179 ttattctcataaaattaaatgcaaattacatttaattttctctctcttccactttccccacaacgaatagccaatgaaaattctttttacatattcctat 2246080  T
Q  846 aaaacttttttc-aagaaaacac 867  Q
    ||||||| |||| ||||||||||    
T  2246079 aaaacttatttcaaagaaaacac 2246057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 741 - 852
Target Start/End: Complemental strand, 39932742 - 39932631
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| || ||||||||||||||| || ||||||||| ||| ||||||||||||| |||||    
T  39932742 tttgtttattctcataaaattaaatacaaattacattcaattttctctctcttttattttctccatgaccaatagccaataaaaattgtttttatatctt 39932643  T
Q  841 cctataaaactt 852  Q
    | ||||||||||    
T  39932642 cttataaaactt 39932631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 741 - 918
Target Start/End: Complemental strand, 3875191 - 3875012
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataacca----atagctaattaaaattgtttttaca 836  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| || |||||| ||||| || |||||||    ||||| ||| |||||||||||||||    
T  3875191 tttgtttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaatatatagccaataaaaattgtttttaca 3875092  T
Q  837 tcttcctataaaacttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    | |||||||||||| |||||||| |||| ||       |||||||||||||| |||||||||| |||||||||||| |||||    
T  3875091 tattcctataaaac-tttttcaaaaaaaaac-acaaaactatacttcaaattcttatgttttacttttcttaataagtgtga 3875012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 741 - 867
Target Start/End: Complemental strand, 47014660 - 47014534
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||||| |||||||| |||| |||||||||||| || |||||| ||||| || |||||||||||  ||| |||||||||||||||| ||    
T  47014660 tttgtttattctcataaaattaaatgtaaat-acattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatttt 47014562  T
Q  841 cctataaaacttttttcaa-gaaaacac 867  Q
    ||||||||||||||||||| ||||||||    
T  47014561 cctataaaacttttttcaacgaaaacac 47014534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 646 - 918
Target Start/End: Complemental strand, 44149096 - 44148829
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||        ||||||||||||| |      |||      
T  44149096 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttattctatttaatcttgttttt-aaaaaaatcatcttttccaatagaagctttttc 44148998  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||| | |||||||||||||||| || ||||||    |||| ||||||| || ||||||||| || ||| ||||||||||||||||||||| ||    
T  44148997 ttattctcatgaaattaaatgcaaattacgtttaatttt----ctctcttattttttccataaccaattgccaatgaaaattgtttttacatcttcccat 44148902  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
     |||||| || | ||||||||||       |||| || |||||| ||||| |||||||||| |||||| |||||    
T  44148901 gaaacttattccaaagaaaacac-aaaaaactatgctacaaattcttatgctttagttttcgtaataagtgtga 44148829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 741 - 918
Target Start/End: Complemental strand, 13136720 - 13136547
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    |||||||||||| |||| ||||||||||||||| |||||||||| ||  ||||| ||||| || |||||||||||| |||  ||||||||||||||||||    
T  13136720 tttgtttattct-ataaaattaaatgcaaattatattcaattttctc--tctttcattttttccataaccaatagccaatggaaattgtttttacatctt 13136624  T
Q  841 cctataaaacttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||   |||||| ||||||||||       ||||||| |||||| |||||||||| |||||||||||| |||||    
T  13136623 cctataatttttttttaaagaaaacac-aaaaaactatactccaaattcttatgttttaattttcttaataagtgtga 13136547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 741 - 849
Target Start/End: Complemental strand, 28120925 - 28120817
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||| ||||| |||||||||||||||||||||||||| || |||||| ||||| || |||| ||||||| ||| |||||||||||||||||||    
T  28120925 tttgtttattcacataaaattaaatgcaaattacattcaattttctctctctttcattttttccataatcaatagccaatgaaaattgtttttacatctt 28120826  T
Q  841 cctataaaa 849  Q
    || ||||||    
T  28120825 cccataaaa 28120817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 646 - 851
Target Start/End: Complemental strand, 6787255 - 6787050
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttg- 744  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||          ||||||| ||| |     ||||      
T  6787255 ctcattttctttatcccaaaatataagcaaaaaagacaaacttttatcctatttaatattgttttttaaaaaaaatatctttttcaaaaaaaaactttta 6787156  T
Q  745 tttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttccta 844  Q
    ||||||||| ||| | |||||||||| |||||||||||| | | |||||| ||||| || |||||||||||| ||| |||||| ||||||||||||||||    
T  6787155 tttattctcgtaaaaataaatgcaaactacattcaatttct-ctctctttcattttttccataaccaatagccaataaaaattatttttacatcttccta 6787057  T
Q  845 taaaact 851  Q
    |||||||    
T  6787056 taaaact 6787050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 746 - 918
Target Start/End: Complemental strand, 24728792 - 24728619
Alignment:
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||| | | ||||||||||||||||||| |||||| || |||||||||||| || |||| |||| || ||| ||||||||||||||||||||| ||    
T  24728792 ttattctcgtgaaattaaatgcaaattacatttaattttctctctcttttattttttccataatcaattgccaatgaaaattgtttttacatcttcccat 24728693  T
Q  846 aaaactt-ttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
     |||||| ||   ||||||||||       |||| || |||||| ||||||||||||||||||||||| |||||    
T  24728692 gaaacttattcgaaagaaaacacaaaaaaactatgctacaaattcttatgttttagttttcttaataagtgtga 24728619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 720 - 859
Target Start/End: Complemental strand, 46818695 - 46818554
Alignment:
Q  720 tcatcttttccaagatttttc--tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagct 817  Q
    ||||||||||||||| ||||   ||| ||||||||||||| ||||||| |||||||| |||| |||| || |  ||| |||||||| ||||| | ||||     
T  46818695 tcatcttttccaagaatttttattttatttattctcataaaattaaatacaaattacgttcagttttctctcaatttcattttctccataactattagcc 46818596  T
Q  818 aattaaaattgtttttacatcttcctataaaacttttttcaa 859  Q
    ||| ||||||||||||| ||||||||||||||||||||||||    
T  46818595 aatgaaaattgtttttatatcttcctataaaacttttttcaa 46818554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 745 - 859
Target Start/End: Original strand, 50369953 - 50370070
Alignment:
Q  745 tttattctcataatattaaatgcaaatta----cattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||| ||||||| |||||||    ||||||||||| || |||||| ||||| || |||||||||||| |||  ||||||||||||||||||    
T  50369953 tttattctcataaaattaaatacaaattaattacattcaattttctctctctttcattttttc-ataaccaatagccaatagaaattgtttttacatctt 50370051  T
Q  841 cctataaaacttttttcaa 859  Q
    |||||||||||||||||||    
T  50370052 cctataaaacttttttcaa 50370070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 746 - 852
Target Start/End: Original strand, 3076291 - 3076397
Alignment:
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||| | ||||||||||||||||||| |||||| || | |||||||||| || ||||||||| || ||| |||||| |||||||||||||| ||    
T  3076291 ttattctcatgaaattaaatgcaaattacatttaattttctctcacttttattttttccataaccaattgccaatgaaaattatttttacatcttcccat 3076390  T
Q  846 aaaactt 852  Q
    |||||||    
T  3076391 aaaactt 3076397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 759 - 860
Target Start/End: Complemental strand, 5858523 - 5858422
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | ||||||||||  || || ||| |||||||| |||||||||||| ||| ||||||||||||| ||||||||||||||||| |||||    
T  5858523 attaaatgcaaagtgcattcaatttgctctctgtttcattttctcaataaccaatagccaatgaaaattgtttttatatcttcctataaaacttatttca 5858424  T
Q  859 ag 860  Q
    ||    
T  5858423 ag 5858422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 741 - 918
Target Start/End: Original strand, 1034849 - 1035023
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||||  ||| | |||||||||| ||||||||||   || ||||||||||||| |||||    
T  1034849 tttgtttattctcatgaaattaaatgcgaattacattcaatttttt-tctcatctattttctctgtaaccaatagtcgatgaaaattgtttttatatctt 1034947  T
Q  841 cctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |  ||||||||| || | ||||||||||       | ||||  |||||| |||||||||| ||||||||||||||||||    
T  1034948 ctcataaaacttattccaaagaaaacac---aaaacaatacgccaaattcttatgttttaattttcttaataaatgtga 1035023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 762 - 849
Target Start/End: Complemental strand, 7876091 - 7876004
Alignment:
Q  762 aaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaa 849  Q
    ||||||||||||||||||||||| || |||||||||||| || |||||||||||  ||| |||||| |||||||||||| ||||||||    
T  7876091 aaatgcaaattacattcaattttctctctcttttattttttccataaccaatagtcaataaaaattatttttacatctttctataaaa 7876004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 741 - 852
Target Start/End: Complemental strand, 37735553 - 37735442
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||| ||| | |||||||||||||||||||||||||| || || ||  |||||||| |||| ||||||| ||| |||||||||||||| ||||    
T  37735553 tttgtttattcacatgaaattaaatgcaaattacattcaattttctctcttttccattttctccataatcaatagccaataaaaattgtttttacttctt 37735454  T
Q  841 cctataaaactt 852  Q
    || || ||||||    
T  37735453 cccatgaaactt 37735442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 4672796 - 4672861
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    ||||||||||||||||||| ||||||||||||| || ||| |||||||||||||||||||||||||    
T  4672796 ctcattttctttgtcccaaaatataagcaaaaaagataaatttttatcctatttaatcttgttttt 4672861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 741 - 845
Target Start/End: Original strand, 50012582 - 50012685
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    |||||||||||| |||| |||||||||||||||||||||||||| |  |||||||||||| |||||||| |||| | ||| |||||| |||||| || ||    
T  50012582 tttgtttattcttataaaattaaatgcaaattacattcaattttctttctcttttattttttctataactaata-ccaatgaaaattatttttatatatt 50012680  T
Q  841 cctat 845  Q
    |||||    
T  50012681 cctat 50012685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 649 - 711
Target Start/End: Original strand, 11240945 - 11241007
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||||  ||||||||||||| |||| |||||||||||||||||||||||||||    
T  11240945 attttctttgtcccagaatataagcaaaaaggacacacttttatcctatttaatcttgttttt 11241007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 741 - 867
Target Start/End: Original strand, 25391675 - 25391799
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||  |||||  |  ||||| ||||| | |||| ||| |||||||||||||||| ||    
T  25391675 tttgtttattctcataaaattaaatgcaaattacattcaa-tttttatctcttcca-cttctccataactattagccaatgaaaattgtttttacatttt 25391772  T
Q  841 cctataaaacttttttcaagaaaacac 867  Q
    | |||||||||| | | ||||||||||    
T  25391773 catataaaacttatctaaagaaaacac 25391799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 796 - 918
Target Start/End: Original strand, 11241073 - 11241195
Alignment:
Q  796 attttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatg 894  Q
    ||||| || |||||||||||| ||| ||||||| |||||||||||||||||||||||||| | ||||||||||       ||||||| |||||| |||||    
T  11241073 attttttccataaccaatagccaatgaaaattggttttacatcttcctataaaactttttccaaagaaaacac-aaaaaactatactccaaattcttatg 11241171  T
Q  895 ttttagttttcttaataaatgtga 918  Q
    ||||| |||| ||||||| |||||    
T  11241172 ttttaatttttttaataagtgtga 11241195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 759 - 860
Target Start/End: Original strand, 37538818 - 37538919
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    ||||| |||||| | ||||||||||  || |||||| |||||||| |||||||| | | ||| |||||||| |||||||||||||||||||||| |||||    
T  37538818 attaactgcaaagtgcattcaatttgctccctctttcattttctcgataaccaacaaccaatgaaaattgtctttacatcttcctataaaacttatttca 37538917  T
Q  859 ag 860  Q
    ||    
T  37538918 ag 37538919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 647 - 711
Target Start/End: Original strand, 47026392 - 47026456
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    ||||||||||||| | || ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  47026392 tcattttctttgttctaaaatataagtaaaaaagacaaacttttatcctatttaatcttgttttt 47026456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 761 - 856
Target Start/End: Original strand, 13351691 - 13351786
Alignment:
Q  761 taaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactttttt 856  Q
    |||||||||| | |||||||||| ||| |  ||| ||||||||||||| |||   | ||| |||||||||||||||||||||||||||||||||||    
T  13351691 taaatgcaaagtgcattcaatttgttctccttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaactttttt 13351786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 741 - 852
Target Start/End: Complemental strand, 23392335 - 23392225
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||| | ||||||||||||||||||| |||||| ||  ||||  |||||||| |||||||||||  ||| |||||| |||||| || ||    
T  23392335 tttgtttattctcatgaaattaaatgcaaattacatt-aattttctctttcttccattttctccataaccaatagtcaatgaaaattatttttatatttt 23392237  T
Q  841 cctataaaactt 852  Q
     |||||||||||    
T  23392236 tctataaaactt 23392225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 759 - 849
Target Start/End: Original strand, 41063750 - 41063840
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaa 849  Q
    |||||||||||| | |||||||||| ||| |||||| |||||||| ||||| |||| | ||| |||||| |||||||||||| ||||||||    
T  41063750 attaaatgcaaagtgcattcaatttgttctctctttgattttctcaataacaaataaccaatgaaaattatttttacatctttctataaaa 41063840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 646 - 711
Target Start/End: Complemental strand, 298931 - 298866
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    ||||||||||||||| ||| || |||||||||| |||||| ||||||||||||||||||| |||||    
T  298931 ctcattttctttgtctcaaaatgtaagcaaaaaagacaaagttttatcctatttaatctttttttt 298866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 759 - 860
Target Start/End: Original strand, 5950448 - 5950549
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||| ||| | |||| |||||  || |||||| ||||| || |||||||||  | ||| ||||||||||||||||||||||||||||||| |||||    
T  5950448 attaaatgtaaagtgcatttaatttgctctctctttcattttttcaataaccaatgaccaatgaaaattgtttttacatcttcctataaaacttatttca 5950547  T
Q  859 ag 860  Q
    ||    
T  5950548 ag 5950549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 790 - 859
Target Start/End: Original strand, 16688176 - 16688245
Alignment:
Q  790 tcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaa 859  Q
    ||||| |||||||| |||||||| | | ||| ||||||||||||||||||||||||||||||| ||||||    
T  16688176 tctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatttcaa 16688245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 759 - 859
Target Start/End: Complemental strand, 25185456 - 25185356
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | |||||||||| ||| || ||| ||||||||||||| |||   | ||| ||| ||||||| ||||||||||||||||||| |||||    
T  25185456 attaaatgcaaagtgcattcaatttgttctctttttcattttctctataatcaactaccaatgaaagttgttttcacatcttcctataaaacttatttca 25185357  T
Q  859 a 859  Q
    |    
T  25185356 a 25185356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 768 - 914
Target Start/End: Complemental strand, 298812 - 298665
Alignment:
Q  768 aaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaagaaaacac 867  Q
    |||||||||| |||||| ||  ||||  |||||||| |||| ||||||| |||||||||  |||||||||||||| |||||  | || | ||||||||||    
T  298812 aaattacatttaattttctctttcttccattttctccataatcaatagccaattaaaataatttttacatcttcccataaacttattctaaagaaaacac 298713  T
Q  868 nnnnnnnctatacttcaaat--ttttatgttttagttttcttaataaat 914  Q
           ||||||||||| |  |||||||||||||||||||||||||||    
T  298712 -atcaaactatacttcaagttattttatgttttagttttcttaataaat 298665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 720 - 907
Target Start/End: Complemental strand, 3861883 - 3861699
Alignment:
Q  720 tcatcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaa 819  Q
    |||||||||  |||| |||| ||| |||||||| |||| ||||||||||||||| ||| ||||||| | | |||| ||||| |  |||| ||||||| ||    
T  3861883 tcatcttttttaagaatttttttt-tttattcttataaaattaaatgcaaattatatttaattttt-ctc-ctttcatttttttcataatcaatagccaa 3861787  T
Q  820 ttaaaattgtttttacatcttcctataaaactt-ttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttctt 907  Q
    | ||||||||||||||||||| | ||||||||| || | |||||||||         ||||||||||||| ||||||||||||||||||    
T  3861786 tgaaaattgtttttacatctttcaataaaacttattctaaagaaaaca-taaaaaattatacttcaaattattatgttttagttttctt 3861699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 759 - 860
Target Start/End: Complemental strand, 8889842 - 8889748
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||| ||| | ||||||||||| || |||||| |||||||| |||||||||        ||||||||||||||||||||||||||||||| |||||    
T  8889842 attaaatgtaaagtgcattcaattttctctctctttcattttctcaataaccaatg-------aaaattgtttttacatcttcctataaaacttatttca 8889750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 746 - 893
Target Start/End: Original strand, 43765290 - 43765438
Alignment:
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||  | |||| |||||||||| |||||||||| |  |||||  |||||||  ||||| |||| | ||| |||| |||||||||||||||||||    
T  43765290 ttattctcacgaaattagatgcaaattaaattcaattttctttctcttccattttctgcataacaaataaccaatgaaaaatgtttttacatcttcctat 43765389  T
Q  846 aaaactt-ttttcaagaaaacacnnnnnnnctatacttcaaatttttat 893  Q
    ||||||| || | ||||||||||       ||||||| |||||||||||    
T  43765390 aaaacttattctaaagaaaacacaaaaaaactatactacaaatttttat 43765438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 657 - 711
Target Start/End: Complemental strand, 3875276 - 3875222
Alignment:
Q  657 tgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||  ||||||||||||| |||||| |||||||||||||||||||||||||    
T  3875276 tgtcccataatataagcaaaaaagacaaatttttatcctatttaatcttgttttt 3875222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 12449198 - 12449153
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  12449198 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 12449153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 759 - 860
Target Start/End: Original strand, 15912207 - 15912308
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | ||||||||||  || |  ||| ||||||||| ||| ||| |   ||| ||||||||||||||||||||||||||||||| |||||    
T  15912207 attaaatgcaaactgcattcaatttgctctccttttcattttctctgtaatcaacaatcaatgaaaattgtttttacatcttcctataaaacttatttca 15912306  T
Q  859 ag 860  Q
    ||    
T  15912307 ag 15912308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 32624237 - 32624192
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  32624237 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 32624192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 39555817 - 39555772
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  39555817 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 39555772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 759 - 859
Target Start/End: Original strand, 7397715 - 7397815
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | ||||||||||  ||  | ||| ||||||||||||| |||   | ||| |||||||||||||||||||||||||||| || |||||    
T  7397715 attaaatgcaaagtgcattcaatttgctctttttttcattttctctataatcaaataccaatgaaaattgtttttacatcttcctataaaatttatttca 7397814  T
Q  859 a 859  Q
    |    
T  7397815 a 7397815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 796 - 867
Target Start/End: Original strand, 30221771 - 30221843
Alignment:
Q  796 attttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt-ttttcaagaaaacac 867  Q
    |||||||| |||||||||| | ||| |||| |||||||||||||||| ||||||||| |||| ||||||||||    
T  30221771 attttctccataaccaatatccaataaaaaatgtttttacatcttcccataaaacttattttaaagaaaacac 30221843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 796 - 852
Target Start/End: Complemental strand, 32318675 - 32318619
Alignment:
Q  796 attttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt 852  Q
    |||||||| |||||||||| | ||| ||||||||||||||||||||| |||||||||    
T  32318675 attttctccataaccaataaccaatgaaaattgtttttacatcttccaataaaactt 32318619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 725 - 852
Target Start/End: Complemental strand, 47303092 - 47302965
Alignment:
Q  725 ttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactctttt-attttctctataaccaatagctaattaa 823  Q
    |||| ||||| |||| |||| |||||||||| | ||||||||||||||||||||| |||| |   | |||| |||||||  |||| ||||||| ||| ||    
T  47303092 tttttcaagaattttttttgcttattctcatgaaattaaatgcaaattacattcagttttctattttttttcattttctacataatcaatagccaatgaa 47302993  T
Q  824 aattgtttttacatcttcctataaaactt 852  Q
    ||||  |||||||||||||||| ||||||    
T  47302992 aatt-attttacatcttcctatgaaactt 47302965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 805 - 859
Target Start/End: Complemental strand, 35366309 - 35366255
Alignment:
Q  805 ataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaa 859  Q
    |||||||||| | ||||||||||||||||||||||| |||||||| || ||||||    
T  35366309 ataaccaataaccaattaaaattgtttttacatctttctataaaatttatttcaa 35366255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 43667531 - 43667486
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  43667531 cattttctttgtctcaaaatataagcaaaaaagacaaacttttatc 43667486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 647 - 711
Target Start/End: Original strand, 3076193 - 3076257
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||| ||| |||||| | ||||  |||||||||||| ||||||||| ||||||||    
T  3076193 tcattttctttgtctcaaaatataatccaaaaaaacaaacttttattctatttaattttgttttt 3076257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 698
Target Start/End: Original strand, 29488661 - 29488713
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatt 698  Q
    ||||||||||||||| ||| ||||||||||||| ||| ||||||||| |||||    
T  29488661 ctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 29488713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 759 - 859
Target Start/End: Complemental strand, 44510371 - 44510271
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | ||||||||||  || |  ||| ||||||||||||| ||||    ||| ||||||||||||||| |||||||||||| || |||||    
T  44510371 attaaatgcaaagtgcattcaatttgctctccttttcattttctctataatcaattatcaatgaaaattgtttttacaacttcctataaaatttatttca 44510272  T
Q  859 a 859  Q
    |    
T  44510271 a 44510271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 702
Target Start/End: Original strand, 7397624 - 7397679
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaat 702  Q
    ||||||||||||||||||  |||||||||||| | | |||||||||| ||||||||    
T  7397624 tcattttctttgtcccaaattataagcaaaaaagcctaacttttatcatatttaat 7397679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 830
Target Start/End: Original strand, 14086966 - 14087030
Alignment:
Q  764 atgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtt 830  Q
    ||||||||||||||||||||| ||  ||||||||||| || ||||| |||||| ||| |||||||||    
T  14086966 atgcaaattacattcaattttctc--tcttttattttttccataactaatagccaatgaaaattgtt 14087030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 772 - 859
Target Start/End: Complemental strand, 30701524 - 30701437
Alignment:
Q  772 tacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaa 859  Q
    ||||||||||||  || || ||| ||||||||||||| |||   | ||| |||||| |||| ||||||||||||||||||| ||||||    
T  30701524 tacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattattttcacatcttcctataaaacttatttcaa 30701437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 50176568 - 50176631
Alignment:
Q  796 attttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaa 859  Q
    ||||||||||||| |||   | ||| |||||||||||||||||||||||||||| || ||||||    
T  50176568 attttctctataatcaactaccaataaaaattgtttttacatcttcctataaaatttatttcaa 50176631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Complemental strand, 51339012 - 51338949
Alignment:
Q  796 attttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaa 859  Q
    |||||||||||||| |||| | ||| ||||||| ||||||||||| |||| |||||| ||||||    
T  51339012 attttctctataactaataaccaatgaaaattgattttacatctttctatgaaacttatttcaa 51338949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 759 - 848
Target Start/End: Original strand, 16661524 - 16661614
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactctttt-attttctctataaccaatagctaattaaaattgtttttacatcttcctataaa 848  Q
    |||||||||||| | |||||||||| ||| || |||| |||||||||| || |||   | ||| ||||||||||||||||| |||||||||    
T  16661524 attaaatgcaaagtgcattcaatttgttctcttttttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctataaa 16661614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 649 - 711
Target Start/End: Complemental strand, 37735651 - 37735589
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    ||||||| ||||||||  | |||||||||| || |||||| |||||||||||||||| |||||    
T  37735651 attttctctgtcccaaactgtaagcaaaaaagataaacttgtatcctatttaatctttttttt 37735589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 759 - 841
Target Start/End: Original strand, 42724103 - 42724185
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttc 841  Q
    |||||||||||||| |||| |||||  || | || | |||||||  ||||| |||| ||||| ||||||||||||||||||||    
T  42724103 attaaatgcaaattgcatttaatttgctctccctatcattttcttcataacaaataactaataaaaattgtttttacatcttc 42724185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 649 - 711
Target Start/End: Original strand, 43765204 - 43765265
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||||| || |||||||||| ||||||||||||  ||||||||| || |||||    
T  43765204 attttctttgtcccaaaatgtaagcaaaaa-gacaaacttttacactatttaatttttttttt 43765265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 2125967 - 2126012
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    |||||||||||||| || ||||||| ||||| ||||||||||||||    
T  2125967 cattttctttgtcctaaaatataagtaaaaaagacaaacttttatc 2126012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 702
Target Start/End: Complemental strand, 5858617 - 5858560
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaat-gacaaacttttatcctatttaat 702  Q
    |||||||||||| ||||||  ||||||||||||  |||||||||||||| ||||||||    
T  5858617 ctcattttctttatcccaaattataagcaaaaaaagacaaacttttatcatatttaat 5858560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 711
Target Start/End: Complemental strand, 23392428 - 23392363
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||| ||| || || |||| ||||| ||| ||||| |||||||||||||||| |||||    
T  23392428 ctcattttctttatccaaaaatgtaagtaaaaaagaccaacttctatcctatttaatctttttttt 23392363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 711
Target Start/End: Complemental strand, 24728891 - 24728826
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    ||||||||||||||| ||| ||||||| ||||   | ||| |||||| ||||||||||||||||||    
T  24728891 ctcattttctttgtctcaaaatataagaaaaataaataaatttttattctatttaatcttgttttt 24728826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 699
Target Start/End: Complemental strand, 40935860 - 40935807
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctattt 699  Q
    ||||||||||||||| ||| ||||||||||||| ||  ||||||||| ||||||    
T  40935860 ctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattt 40935807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 699
Target Start/End: Complemental strand, 40960721 - 40960668
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctattt 699  Q
    ||||||||||||||| ||| ||||||||||||| ||  ||||||||| ||||||    
T  40960721 ctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattt 40960668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 711
Target Start/End: Complemental strand, 47014756 - 47014691
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    ||||||||||||   |||| |||||||||||||  | || |||||| |||||||||||||||||||    
T  47014756 ctcattttctttactccaaaatataagcaaaaaatataatcttttaccctatttaatcttgttttt 47014691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 699
Target Start/End: Original strand, 49924332 - 49924385
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctattt 699  Q
    ||||||||||||||| ||| ||||||||||||| ||  ||||||||| ||||||    
T  49924332 ctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattt 49924385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 6e-61; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 646 - 918
Target Start/End: Original strand, 45660259 - 45660536
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnn--tcatcttttccaagatttttcttt 743  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||| ||||          ||||||||| ||| | || | |||    
T  45660259 ctcattttctttgtcccaaaatataagcaaaaaaaacaaacttttatcctatttaatcttggttttaaaaaaaaaatcatctttttcaataattgttttt 45660358  T
Q  744 gtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcct 843  Q
    |||||||||||||| ||||||||||||||||||| |||||| || |||||| |||||||| |||||||||||| ||| ||||||||||||||||||||||    
T  45660359 gtttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcct 45660458  T
Q  844 ataaaacttttttc-aagaaaacacnnnnnnnctatacttcaa---atttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||| ||||||||||       ||||||| |||   ||| |||||||||||||||||||||||||||||    
T  45660459 ataaaacttttttcaaagaaaacac-aaaaaactatactccaaattattcttatgttttagttttcttaataaatgtga 45660536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 646 - 867
Target Start/End: Complemental strand, 33198898 - 33198673
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnn----tcatcttttccaagatttttct 741  Q
    ||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||            |||||||||||||||||||| |    
T  33198898 ctcattttctttgtcccaaaatataagcaaaaaagacaaaattttatcctatttaatcttgttttttttaaaaaaaaatcatcttttccaagattttt-t 33198800  T
Q  742 ttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttc 841  Q
    |||||||||||||||  |||||||||||||||||||||||||| || |||||| |||||||| |||||||||| | ||| ||||||||||||||||||||    
T  33198799 ttgtttattctcatagaattaaatgcaaattacattcaattttctctctctttcattttctccataaccaataaccaatcaaaattgtttttacatcttc 33198700  T
Q  842 ctataaaactt-ttttcaagaaaacac 867  Q
    ||||||||||| |||| ||||||||||    
T  33198699 ctataaaacttcttttaaagaaaacac 33198673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 646 - 918
Target Start/End: Original strand, 19263996 - 19264268
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||        || | ||||||||||      |||||    
T  19263996 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttatttaatcttgtttttttaaaaaatctt-ttttccaagaaaaacttttgt 19264094  T
Q  746 ttattctcataatattaaatgcaaa-ttacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttccta 844  Q
    |||||||||||| |||||||||||| |||||||||||||| || |||||| ||||| || |||||||||||| ||| |||||||||||||||||||||||    
T  19264095 ttattctcataaaattaaatgcaaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttccta 19264194  T
Q  845 taaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||||| | ||||||||||        ||||||  ||||| ||||||||||||||||||||||| |||||    
T  19264195 taaaactttttccaaagaaaacacaaaaaat-tatactctaaattcttatgttttagttttcttaataagtgtga 19264268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 45085230 - 45085425
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||||| ||||| || ||||||||| ||||||     
T  45085230 atcttttctaagattttt-tttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatggctaatg 45085328  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||       ||||||| |||||| |||||||||| |||||||||||| |||||    
T  45085329 aaaattgtttttacatcttcctataaaacttttttcaaagaaaatac-aaaaaactatactccaaattcttatgttttaattttcttaataagtgtga 45085425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 722 - 918
Target Start/End: Complemental strand, 6110388 - 6110191
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactctttt--attttctctataaccaatagctaa 819  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||| ||  ||||| || |||||||||||| ||    
T  6110388 atcttttccaagattttt-tttgtttattctcataaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagccaa 6110290  T
Q  820 ttaaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    | |||||||||||||||||||||||||||||||||| | ||||||||||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  6110289 tgaaaattgtttttacatcttcctataaaactttttccgaagaaaacac-aaaaagctatactccaaattcttatgttttagttttcttaataagtgtga 6110191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 646 - 911
Target Start/End: Original strand, 28858206 - 28858473
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||||||||||||||| || |||||||||||||  |||||||||||||||||||||||||||||||        || ||||| ||||||      |||||    
T  28858206 ctcattttctttgtcctaaaatataagcaaaaaatacaaacttttatcctatttaatcttgtttttttagaaaatc-tctttcccaagaaaaacttttgt 28858304  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| |||||||||||||||||||||||||| || |||||| |||||  | |||||||||||| ||| |||||| |||||||||||| ||||    
T  28858305 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttttacaataaccaatagccaatgaaaattatttttacatctttctat 28858404  T
Q  846 aaaacttttttc-aagaaaacac--nnnnnnnctatacttcaaatttttatgttttagttttcttaata 911  Q
    |||||||||||| ||||||||||         ||||| || ||||| ||||||||||||||||||||||    
T  28858405 aaaacttttttcaaagaaaacacaaaaaactactatattttaaattcttatgttttagttttcttaata 28858473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 722 - 912
Target Start/End: Complemental strand, 28599336 - 28599146
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||  ||||| ||||| || |||||||||||| |||     
T  28599336 atcttttccaagatttttttttgtttattctcataaaattaaatgcatattacattcaattttctctttctttcattttttccataaccaatagccaatg 28599237  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataa 912  Q
    |||||| |||||||||||||||||||| |||||| | ||||||||||       ||||||| |||||| |||||||||||||||||||||||    
T  28599236 aaaattatttttacatcttcctataaatctttttccaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataa 28599146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 646 - 867
Target Start/End: Original strand, 14873857 - 14874081
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatga-caaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttg 744  Q
    ||||||||||||||||||| |||||||||||||  | |||| |||||||||| ||||||||||||||        | ||||||||| | | || | ||||    
T  14873857 ctcattttctttgtcccaaaatataagcaaaaaaaaacaaatttttatcctacttaatcttgtttttaaaaaaagtaatcttttccgataattgtttttg 14873956  T
Q  745 tttattctcataatattaaa-tgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcct 843  Q
    ||||||||||||  |||||| ||||||||||||| |||||| || |||||| |||||||| |||||||||||| ||| |||||| |||||||||||||||    
T  14873957 tttattctcatataattaaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattatttttacatcttcct 14874056  T
Q  844 ataaaacttttttc-aagaaaacac 867  Q
    |||||||||||||| ||||||||||    
T  14874057 ataaaacttttttcaaagaaaacac 14874081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 735 - 918
Target Start/End: Original strand, 3201311 - 3201494
Alignment:
Q  735 tttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgttttta 834  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| || |||||||||||| ||| |||||||||||||    
T  3201311 tttttttttgtttattctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgttttta 3201410  T
Q  835 catcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||| |||||||||||||| | ||||||||||       |||||||| ||||| ||||||||||||||||||||||| |||||    
T  3201411 catctttctataaaactttttccaaagaaaacac-aaaaaactatactttaaattcttatgttttagttttcttaataagtgtga 3201494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 651 - 918
Target Start/End: Original strand, 11616925 - 11617192
Alignment:
Q  651 tttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtttatt 750  Q
    ||||||||||| || ||||||| ||||| || |||||||||||||||||||||||||||||           ||||||||||||      |||| |||||    
T  11616925 tttctttgtcctaaaatataagtaaaaaagataaacttttatcctatttaatcttgtttttttttaaaaatctcttttccaagaaaaacttttgcttatt 11617024  T
Q  751 ctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaac 850  Q
     |||||| || ||||||||||| ||||||||||| || ||||||||||||  |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  11617025 ttcataaaataaaatgcaaatttcattcaattttctctctcttttatttttactataaccaatagccaatgaaaattgtttttacatcttcctataaaac 11617124  T
Q  851 ttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||| ||||||| ||       ||||||| |||||| |||||||||| |||||||||||| |||||    
T  11617125 ttttttcaaagaaaatac-caaaaactatactccaaattcttatgttttaattttcttaataagtgtga 11617192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 646 - 918
Target Start/End: Original strand, 25571941 - 25572213
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnn-tcatcttttccaagatttttctttg 744  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||| ||||||||||||||||||         ||||||||||||| | |||| ||||    
T  25571941 ctcattttctttgtcccaaaatataagcaaaaaaaacaaacttttattctatttaatcttgttttttaaaaaaaatcatcttttccaataattttttttg 25572040  T
Q  745 tttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttccta 844  Q
     |||||||||| | ||||||||||||||||||| |||||| || |||||  ||||| || |||||||||| | ||| ||||||||||||||||||||| |    
T  25572041 cttattctcatgaaattaaatgcaaattacatttaattttctctctcttccatttt-tccataaccaatatccaatgaaaattgtttttacatcttccca 25572139  T
Q  845 taaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    | |||||| || | ||||||||||       |||| || |||||| ||||| ||||||||||||||||| |||||    
T  25572140 tgaaacttattccaaagaaaacac-aaaaaactatgctacaaattcttatgctttagttttcttaataagtgtga 25572213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 35517095 - 35517291
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||| |||||||||| |||  |||||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| || |||||||||||| |||     
T  35517095 atctttttcaagattttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatg 35517194  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||| |||||||||||  |||||||||||||| | ||||||||||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  35517195 aaaattatttttacatctcactataaaactttttccaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 35517291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 41528229 - 41528425
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| || |||||||||||| |||     
T  41528229 atctttttcaagattttt-tttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatg 41528327  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatg-ttttagttttcttaataaatgtga 918  Q
    ||||||||||||||||||||||||||||    |||| ||||||||||       |||||||||||||| ||||| ||||| |||||||||||| |||||    
T  41528328 aaaattgtttttacatcttcctataaaaaaaatttcaaagaaaacac-aaaaaactatacttcaaattcttatgtttttaattttcttaataagtgtga 41528425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 741 - 918
Target Start/End: Original strand, 12938233 - 12938410
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||| | |||||||||||||||||||||  ||| || ||||||||||||||| |||| ||||||| ||| |||||||||||||||  ||    
T  12938233 tttgtttattctcatgaaattaaatgcaaattacattcatatttatctctcttttattttctccataatcaatagccaatgaaaattgtttttacacttt 12938332  T
Q  841 cctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||| |||| |||||| |||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  12938333 cctataaaacttatttcaaagaaagcac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 12938410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 669 - 918
Target Start/End: Complemental strand, 9864958 - 9864710
Alignment:
Q  669 taagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtttattctcataatattaaatgca 768  Q
    |||||||||| ||||||||||||||||||||||| ||||||||         ||||||||||||||      |||| |||||||||| | ||||||||||    
T  9864958 taagcaaaaaagacaaacttttatcctatttaattttgttttttttaaaaaccatcttttccaagaaaaacatttgcttattctcatgaaattaaatgca 9864859  T
Q  769 aattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaa-gaaaacac 867  Q
    |||||||||||||||| ||  ||||  |||||||| |||| |||| || ||| |||||||||||||| |||||| || |||||| || ||| ||||||||    
T  9864858 aattacattcaattttatc--tcttccattttctccataatcaattgccaatgaaaattgtttttacctcttcccatgaaacttattccaaagaaaacac 9864761  T
Q  868 nnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
           ||||||| |||||| ||||||||||||||||||||||| |||||    
T  9864760 aaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 9864710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 646 - 852
Target Start/End: Complemental strand, 29524304 - 29524099
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||| ||||||||| ||||||||        |||| |||||||| |      |||      
T  29524304 ctcattttctttgtcccaaaatataagtaaaaaagacaaacttttattctatttaatattgtttttaaaaaaa-tcatattttccaataaaaactttttc 29524206  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||| | ||||||||||||||||||| |||||| || |||||||||||| || ||||||||| || ||| ||||||||||||||||||||| ||    
T  29524205 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccat 29524106  T
Q  846 aaaactt 852  Q
     ||||||    
T  29524105 gaaactt 29524099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 741 - 918
Target Start/End: Complemental strand, 6766103 - 6765925
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttct-ctataaccaatagctaattaaaattgtttttacatct 839  Q
    ||||||||||||||| | |||||||| ||||||||||||||||| || |||||  ||||| | | |||||||||||  ||| ||||||||||||||||||    
T  6766103 tttgtttattctcattaaattaaatgtaaattacattcaattttctctctcttccatttttttccataaccaatagtcaataaaaattgtttttacatct 6766004  T
Q  840 tcctataaaacttttttcaa-gaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||| || || ||| |||||||        ||||||||||||||||||||||||| |||||||||||| |||||    
T  6766003 tcctataaaatttattccaatgaaaaca-taaaaaactatacttcaaatttttatgttttaattttcttaataagtgtga 6765925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 646 - 912
Target Start/End: Original strand, 8701498 - 8701764
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||||||||||| ||  || |||||| |||||| |||||||||||||  |||||||||||||||||        ||||||||||||| |      ||||     
T  8701498 ctcattttctttatcttaaaatataaacaaaaaagacaaacttttattatatttaatcttgttttttaaaaaaatcatcttttccaataaaaacttttgc 8701597  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    || ||||||| | ||||||| |||||| |||| |||||| || |||||  ||||| || |||||||||||| ||| ||||||||||||||||||||| ||    
T  8701598 ttgttctcatgaaattaaatacaaatttcatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatcttcccat 8701697  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataa 912  Q
     |||||| || | |||||||||        |||| || ||||||||||||||||||||||||||||||    
T  8701698 gaaacttattccaaagaaaaca-taaaaaactatgctacaaatttttatgttttagttttcttaataa 8701764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 744 - 918
Target Start/End: Complemental strand, 24204695 - 24204521
Alignment:
Q  744 gtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcct 843  Q
    |||||||||||| |||||||||| |||||| |||||||||| || |||||  |||||||  |||||||||||| ||| ||||||| |||||||| |||||    
T  24204695 gtttattctcatgatattaaatgtaaattatattcaattttctctctcttccattttcttcataaccaatagccaatgaaaattgattttacatattcct 24204596  T
Q  844 ataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||| || | ||||||||||        |||||| |||||| ||| |||||||||||||| ||||||||||    
T  24204595 ataaaacttattccaaagaaaacacaataaat-tatactccaaattcttaggttttagttttcttgataaatgtga 24204521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 741 - 852
Target Start/End: Original strand, 33677474 - 33677585
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||| | ||||||||| ||| |||||||||||| |  |||||  |||||||| |||||||||||  ||| |||||||||||||||||||    
T  33677474 tttgtttattctcatgaaattaaatgctaataacattcaattttctttctcttcaattttctccataaccaatagtcaatgaaaattgtttttacatctt 33677573  T
Q  841 cctataaaactt 852  Q
    ||||||||||||    
T  33677574 cctataaaactt 33677585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 741 - 852
Target Start/End: Complemental strand, 40584567 - 40584456
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || |||||| |||||  | |||||||| | | ||| |||||||||||||||||||    
T  40584567 tttgtttattttcatgaaattaaatgcaaattacattcaattttctctctctttcatttttcccataaccaacaaccaatgaaaattgtttttacatctt 40584468  T
Q  841 cctataaaactt 852  Q
    || |||||||||    
T  40584467 cccataaaactt 40584456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 646 - 918
Target Start/End: Original strand, 35022793 - 35023066
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||| ||||||||||| || || |||||||||| ||||||| ||||| ||||||||||||||||||          ||||||||||| |   |  |||||    
T  35022793 ctcactttctttgtcctaaaatgtaagcaaaaaagacaaacatttatactatttaatcttgtttttttaaaaaactatcttttccaacaaaatcttttgt 35022892  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataacca--atagctaattaaaattgtttttacatcttcct 843  Q
    ||  |||||| | ||||||||||||||  |||||||||| || ||||   ||||||||  ||| ||  ||||| ||| ||||||||||||||||||||||    
T  35022893 tttatctcattaaattaaatgcaaattgtattcaattttctctctctaccattttctccttaaacaatatagcaaatgaaaattgtttttacatcttcct 35022992  T
Q  844 ataaaacttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    || ||||||  | ||| |||||||        |||||| |||||| ||||||||||||||||||||||| |||||    
T  35022993 atgaaacttactccaaaaaaacacaaaaaat-tatactccaaattcttatgttttagttttcttaataagtgtga 35023066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 763 - 860
Target Start/End: Original strand, 9709526 - 9709623
Alignment:
Q  763 aatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaag 860  Q
    |||||||||| |||||||||| ||| |||||| |||||||| |||| ||||| | ||| ||||||||||| ||||||||||||||||||| |||||||    
T  9709526 aatgcaaattgcattcaatttgttctctctttcattttctcaataatcaataacaaatgaaaattgttttcacatcttcctataaaacttgtttcaag 9709623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 649 - 711
Target Start/End: Complemental strand, 5280741 - 5280679
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||    
T  5280741 attttctttgtcccaaaatataagcaaaaaagacaaatttttatcctatttaatcttgttttt 5280679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 745 - 852
Target Start/End: Original strand, 5963196 - 5963302
Alignment:
Q  745 tttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttccta 844  Q
    |||||||| || | |||||||||||||||||||||||||| || |||||  |||||||  |||||||||||| ||| |||||| |||||||||| ||| |    
T  5963196 tttattcttatgacattaaatgcaaattacattcaattttctctctcttccattttcttcataaccaatagccaataaaaattatttttacatc-tccca 5963294  T
Q  845 taaaactt 852  Q
    ||||||||    
T  5963295 taaaactt 5963302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 771 - 918
Target Start/End: Complemental strand, 35115943 - 35115795
Alignment:
Q  771 ttacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaagaaaacac-nn 869  Q
    ||||||||||||||  | |||||  |||||||| |||||||||| | ||| ||||||||||||||||||| ||||||||||| ||  || |||| ||       
T  35115943 ttacattcaattttcactctcttccattttctccataaccaataacaaatgaaaattgtttttacatctttctataaaacttattaaaaaaaaaaacaca 35115844  T
Q  870 nnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
         ||||||| |||||| ||||||||||||| ||||||||| |||||    
T  35115843 aaaaactatactccaaattcttatgttttagttctcttaataagtgtga 35115795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 741 - 832
Target Start/End: Complemental strand, 39696968 - 39696877
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttt 832  Q
    ||||||||||||||  | ||||||||||||||||||| |||||| ||  ||||  ||||||||||| | ||||||||||| |||||||||||    
T  39696968 tttgtttattctcacgaaattaaatgcaaattacatttaattttctctttcttccattttctctatgatcaatagctaatgaaaattgtttt 39696877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 649 - 711
Target Start/End: Complemental strand, 40808973 - 40808911
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||||| ||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  40808973 attttctttgtcccaaaatataagcaaaaaagacaaatttttattctatttaatctcgttttt 40808911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 746 - 816
Target Start/End: Original strand, 44454987 - 44455057
Alignment:
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagc 816  Q
    |||||||||| | ||||||||||||||||||||||||||| | |||||  ||||||||||||| |||||||    
T  44454987 ttattctcatgaaattaaatgcaaattacattcaatttttcctctcttccattttctctataatcaatagc 44455057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 759 - 852
Target Start/End: Original strand, 26998326 - 26998419
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt 852  Q
    |||||||||||| | ||||||||||  || || ||| ||||||||||||| |||   | ||| |||||||||||||||||||||||||||||||    
T  26998326 attaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaactt 26998419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 38070912 - 38070977
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||||||||  |||||||||||| |||||||||||||| ||||||||  |||||||    
T  38070912 ctcattttctttgtcccaaattataagcaaaaaagacaaacttttatcatatttaattatgttttt 38070977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 731 - 918
Target Start/End: Complemental strand, 7645409 - 7645219
Alignment:
Q  731 aagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttt---tattttctctataaccaatagctaattaaaatt 827  Q
    |||| |||| ||||||||||||||| | |||||||||||||||||||||||||| ||  |  ||    |||||||| ||||  |||||| ||| ||||||    
T  7645409 aagaattttttttgtttattctcatgaaattaaatgcaaattacattcaattttctctataattaaccattttctccataattaatagccaatgaaaatt 7645310  T
Q  828 gtttttacatcttcctataaaactt-ttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||| |||| || ||| || || | | ||||||||        |||||| |||||| ||||||||||||||||||||||| |||||    
T  7645309 gtttttacatgttcccatgaaatttattctaaggaaaacacaaaatat-tatactccaaattcttatgttttagttttcttaataagtgtga 7645219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 822 - 918
Target Start/End: Original strand, 43415473 - 43415569
Alignment:
Q  822 aaaattgtttttacatcttcctataaaac-ttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||        ||||||||||||| |||| |||||||||||||| ||| |||||    
T  43415473 aaaattgtttttacatcttcctataaaactttttttaaagaaaacacaaaaaat-tatacttcaaattcttatattttagttttcttagtaagtgtga 43415569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 741 - 864
Target Start/End: Complemental strand, 30830765 - 30830642
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    |||| |||||||||| | |||||||||||||||||| ||||||| || || ||| |||||||| |||| ||||| | ||| ||| || |||||| |||||    
T  30830765 tttgattattctcatgaaattaaatgcaaattacatacaattttctctctttttcattttctcaataatcaataaccaatgaaatttttttttaaatctt 30830666  T
Q  841 cctataaaacttttttcaagaaaa 864  Q
    |  || |||||| |||||| ||||    
T  30830665 ctcatgaaacttatttcaaaaaaa 30830642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 783 - 918
Target Start/End: Complemental strand, 40808846 - 40808712
Alignment:
Q  783 ttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatact 881  Q
    ||||| |||||||||||| ||  |||||||| |||||| ||||||||||||||||||||| || |||||| || | ||||||||||       |||| ||    
T  40808846 ttttctctcttttattttttccctaaccaattgctaatgaaaattgtttttacatcttcc-atgaaacttattccaaagaaaacac-aaaaaactatgct 40808749  T
Q  882 tcaaatttttatgttttagttttcttaataaatgtga 918  Q
     |||||| ||||| ||||||||||||||||| |||||    
T  40808748 acaaattcttatgctttagttttcttaataagtgtga 40808712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 6110431 - 6110386
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  6110431 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 6110386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 18454962 - 18455027
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||||| || ||||||||||||| || ||| ||||||  |||||||||||||||||    
T  18454962 ctcattttctttgtcctaaaatataagcaaaaaagataaatttttattttatttaatcttgttttt 18455027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 741 - 866
Target Start/End: Complemental strand, 30421351 - 30421226
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    |||||||||||| |||| |||||||| |||||||||| |||||| ||  ||||| ||||| |  | ||  ||||    || |||||||||||||||||||    
T  30421351 tttgtttattcttataaaattaaatgtaaattacatttaattttctctttctttcatttttttaaaaattaataatcgataaaaattgtttttacatctt 30421252  T
Q  841 cctataaaacttttttcaagaaaaca 866  Q
    | |||||||||||||| || ||||||    
T  30421251 cttataaaactttttttaaaaaaaca 30421226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 759 - 859
Target Start/End: Original strand, 32010111 - 32010211
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | |||| |||||  || || ||| ||||||||||||| |||   | ||| |||||| |||||||||||||||||||||||| |||||    
T  32010111 attaaatgcaaagtgcatttaatttgctctctttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttca 32010210  T
Q  859 a 859  Q
    |    
T  32010211 a 32010211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 759 - 859
Target Start/End: Original strand, 32273680 - 32273780
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||| ||| | ||||||||||  || || ||| ||||||||||||| |||   | ||| ||||||||||||| ||||||||||||||||| |||||    
T  32273680 attaaatgtaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttatatcttcctataaaacttatttca 32273779  T
Q  859 a 859  Q
    |    
T  32273780 a 32273780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 759 - 852
Target Start/End: Complemental strand, 8032820 - 8032726
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactctttt-attttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt 852  Q
    |||||||||||| | ||||||||||  || ||| ||| |||||||| ||||| |  | | ||| |||||||||||||||||||||||||||||||    
T  8032820 attaaatgcaaaatgcattcaatttgctctctcctttcattttctcaataactagcaaccaataaaaattgtttttacatcttcctataaaactt 8032726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 822 - 859
Target Start/End: Complemental strand, 4891727 - 4891690
Alignment:
Q  822 aaaattgtttttacatcttcctataaaacttttttcaa 859  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  4891727 aaaattgtttttacatcttcctataaaacttatttcaa 4891690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 822 - 859
Target Start/End: Complemental strand, 16495014 - 16494977
Alignment:
Q  822 aaaattgtttttacatcttcctataaaacttttttcaa 859  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  16495014 aaaattgtttttacatcttcctataaaacttatttcaa 16494977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 28599379 - 28599334
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||    
T  28599379 cattttctttgtcccaaaatataatcaaaaaagacaaacttttatc 28599334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 646 - 699
Target Start/End: Original strand, 33635249 - 33635302
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctattt 699  Q
    ||||||||||||||| ||| ||||||||||||| ||| ||||||||| ||||||    
T  33635249 ctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattt 33635302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 41528186 - 41528231
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    |||||| |||||||||| ||||||||||||| ||||||||||||||    
T  41528186 cattttgtttgtcccaaaatataagcaaaaaagacaaacttttatc 41528231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 655 - 711
Target Start/End: Original strand, 44454869 - 44454924
Alignment:
Q  655 tttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||| ||||||| |||||  |||||||||||||||| ||||||||||||||    
T  44454869 tttgtcccaaaatataagaaaaaaa-acaaacttttatcctaattaatcttgttttt 44454924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 649 - 693
Target Start/End: Original strand, 45085188 - 45085232
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    |||||||||||||||| ||||||||||||| || |||||||||||    
T  45085188 attttctttgtcccaaaatataagcaaaaaagataaacttttatc 45085232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 759 - 862
Target Start/End: Complemental strand, 18834061 - 18833958
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||||| |||||||||| ||| |  |||||||||||| ||||  | || | ||| | ||||||||||||||||| | || |||||| || ||    
T  18834061 attaaatgcaaattgcattcaatttgttctcctttttattttctccataataattaaccaatgataattgtttttacatctttccatgaaacttattcca 18833962  T
Q  859 agaa 862  Q
    ||||    
T  18833961 agaa 18833958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 702
Target Start/End: Original strand, 26998234 - 26998289
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaat 702  Q
    ||||||||||||||| ||  |||||||||||| ||| |||||||||| ||||||||    
T  26998234 tcattttctttgtcctaaattataagcaaaaaagaccaacttttatcatatttaat 26998289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 796 - 859
Target Start/End: Original strand, 38071041 - 38071104
Alignment:
Q  796 attttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaa 859  Q
    ||||||||||||| |||   | ||| |||||||||||||||||||||| |||||||| ||||||    
T  38071041 attttctctataatcaactaccaatgaaaattgtttttacatcttcctgtaaaacttatttcaa 38071104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 648 - 698
Target Start/End: Complemental strand, 18834153 - 18834103
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatt 698  Q
    ||||||||||||||||| ||||||||||||| ||  ||||||||| |||||    
T  18834153 cattttctttgtcccaaaatataagcaaaaaagatcaacttttattctatt 18834103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 646 - 692
Target Start/End: Original strand, 21539670 - 21539716
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttat 692  Q
    ||||||||||||||| ||| ||||||||||||| ||| |||||||||    
T  21539670 ctcattttctttgtctcaaaatataagcaaaaaagaccaacttttat 21539716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 3201265 - 3201310
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    |||||||||| |||||| ||||||||||||| |||||||| |||||    
T  3201265 cattttctttatcccaaaatataagcaaaaaagacaaactattatc 3201310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 808
Target Start/End: Complemental strand, 29514170 - 29514121
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataa 808  Q
    |||||||||||||| |||||||||| ||| |  |||||||||||||||||    
T  29514170 attaaatgcaaattgcattcaatttgttctcatttttattttctctataa 29514121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 30752042 - 30752107
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||| ||||||| ||||||  |||||||||||  |||||  ||||||||||||||||||| |||||    
T  30752042 ctcactttctttatcccaaattataagcaaaatagacaagtttttatcctatttaatcttattttt 30752107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 32273587 - 32273652
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||| ||||||||||| ||  |||||||||||| ||| |||||||||| ||||||||  |||||||    
T  32273587 ctcaatttctttgtcctaaattataagcaaaaaagaccaacttttatcatatttaattatgttttt 32273652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 875 - 912
Target Start/End: Original strand, 33677608 - 33677645
Alignment:
Q  875 ctatacttcaaatttttatgttttagttttcttaataa 912  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  33677608 ctattcttcaaatttttatgttttagttttcgtaataa 33677645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 707
Target Start/End: Complemental strand, 35116060 - 35115999
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgt 707  Q
    |||||||||||||| | || || |||| ||||| |||||| ||| |||||||||||||||||    
T  35116060 ctcattttctttgttctaaaatgtaagaaaaaaagacaaattttaatcctatttaatcttgt 35115999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 35517052 - 35517097
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||| || |||| ||||||||||||| ||||||||||||||    
T  35517052 cattttcttcgtaccaaaatataagcaaaaaagacaaacttttatc 35517097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 674 - 711
Target Start/End: Complemental strand, 39697039 - 39697002
Alignment:
Q  674 aaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    ||||| || |||||||||||||||||||||||||||||    
T  39697039 aaaaaagataaacttttatcctatttaatcttgttttt 39697002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 4e-59; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 646 - 918
Target Start/End: Complemental strand, 34890439 - 34890168
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||        || | ||||||||||      |||||    
T  34890439 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttatttaatcttgtttttttaaaaaatctt-ttttccaagaaaaacttttgt 34890341  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| |||||||||||||||||||||||||| || |||||| ||||| || |||||||||||| ||| ||||||||||||||||||||||||    
T  34890340 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 34890241  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||| | ||||||||||        |||||| |||||| ||||||||||||||||||||||| |||||    
T  34890240 aaaactttttccaaagaaaacacaaaaaat-tatactccaaattcttatgttttagttttcttaataagtgtga 34890168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 646 - 918
Target Start/End: Original strand, 36190666 - 36190938
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||           | ||||||||||      |||||    
T  36190666 ctcattttctttgtcccaaaatataagcaaaaaagacacacttttatcctatttaatcttgtttttaaaaaaaaatctattttccaagaaaaacttttgt 36190765  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| |||||||||||||||||||||||||| || |||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||    
T  36190766 ttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 36190865  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||| ||||||||||       |||||||  ||||| |||||||||||||||||||| || |||||    
T  36190866 aaaacttttttcaaagaaaacac-aaaaaactatactctaaattcttatgttttagttttcttaacaagtgtga 36190938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 647 - 918
Target Start/End: Complemental strand, 43216619 - 43216341
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaa------cttttatcctatttaatcttgtttttnnnnnnnn-tcatcttttccaagattttt 739  Q
    |||||||||||||||||| |||||||||||||  | |||      ||||||||||||||||||||||||||         ||||||||||||| | || |    
T  43216619 tcattttctttgtcccaaaatataagcaaaaaaaaaaaaaaaaaacttttatcctatttaatcttgtttttaaaaaaaaatcatcttttccaataattgt 43216520  T
Q  740 ctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatct 839  Q
     ||||||||||||||||| ||||||||||||||||||| |||||| || |||||| |||||||| |||||||||||  ||| ||||||||||||||||||    
T  43216519 ttttgtttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagtgaatgaaaattgtttttacatct 43216420  T
Q  840 tcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  43216419 tcctataaaacttttttcaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 43216341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 722 - 918
Target Start/End: Complemental strand, 7022592 - 7022397
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||| |||||||||| |||||| |||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| || |||||||||||| |||     
T  7022592 atctttttcaagatttttttttgtt-attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatg 7022494  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||| |||||| |||||||||||||||||||||| ||||||||||       ||||||| ||||||||||||||||||||||||||||||||||||    
T  7022493 aaaattatttttatatcttcctataaaacttttttcaaagaaaacac-aaaaaactatactccaaatttttatgttttagttttcttaataaatgtga 7022397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 646 - 918
Target Start/End: Complemental strand, 34158556 - 34158284
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||| ||| ||||| |||| ||||||| ||||| || ||||||||||| |||||||||||||||||        || | |||||||||| |||| |||||    
T  34158556 ctcactttgtttgttccaaaatataagtaaaaaagataaacttttatcgtatttaatcttgttttttaaaaaaatctt-ttttccaagaattttttttgt 34158458  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    ||||| |||||| |||||||||||||||||||||||||| || ||||||| |||| |  |||||||||||  ||| ||||||||||||||||||||||||    
T  34158457 ttattatcataaaattaaatgcaaattacattcaattttctctctcttttgtttttttcataaccaatagtcaatgaaaattgtttttacatcttcctat 34158358  T
Q  846 aaaactt--ttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||  |||| ||||||||||       ||||||| || ||| |||||||||| ||||||||||||||||||    
T  34158357 aaaacttttttttaaagaaaacac-aacaaactatactccagattcttatgttttaattttcttaataaatgtga 34158284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 7858499 - 7858694
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||| || |||||| ||||| || |||| |||| |  |||     
T  7858499 atcttttccaagattttt-tttgtttattctcataaaattaaatgcaaattactttcaattttctctctctttcattttttccataatcaatggtcaatg 7858597  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||||||||||||||||||||| || |||||||       ||||||| |||||| |||||||||||||||||||||||||||||    
T  7858598 aaaattgtttttacatcttcctataaaacttttttcaaataaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataaatgtga 7858694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 646 - 867
Target Start/End: Original strand, 13143659 - 13143880
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||||| ||||||||||||||        || |||||| |||||      |||||    
T  13143659 ctcattttctttgtcccaaaatataagcaaaaaagataaacttttatcctaattaatcttgtttttaaaaaaaatc-tctttttcaagaaaaacttttgt 13143757  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||| |||||  | | |||||| ||| ||| ||||||||||||||||||||||||    
T  13143758 ttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttcccacaaccaacagccaatgaaaattgtttttacatcttcctat 13143857  T
Q  846 aaaacttttttcaa-gaaaacac 867  Q
     ||||||||||||| ||||||||    
T  13143858 gaaacttttttcaacgaaaacac 13143880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 646 - 916
Target Start/End: Complemental strand, 8107884 - 8107613
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaat-gacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaaga-tttttcttt 743  Q
    ||||||||||||||||||| |||||||||||||  |||||| ||||||| |||||||||||||||||        | ||||||||||||| ||||| |||    
T  8107884 ctcattttctttgtcccaaaatataagcaaaaaaagacaaatttttatcttatttaatcttgtttttttaaaaaat-atcttttccaagaattttttttt 8107786  T
Q  744 gtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcct 843  Q
     ||||||||||||| |||||||||||||||||||||||||| || |||||| ||||  || |||||||||||| ||| ||||||||||||||||| |  |    
T  8107785 ttttattctcataaaattaaatgcaaattacattcaattttctctctctttcattta-tccataaccaatagccaatgaaaattgtttttacatcatatt 8107687  T
Q  844 ataaaacttttttcaa-gaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgt 916  Q
     ||||||||||||||| ||||| ||       ||||||| |||||| |||| ||||| |||| |||||||||||    
T  8107686 gtaaaacttttttcaaagaaaatacaaaaaaactatactccaaattcttatattttaatttttttaataaatgt 8107613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 722 - 914
Target Start/End: Complemental strand, 41086575 - 41086384
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||| || || ||||||||| || || ||||||||| |||     
T  41086575 atctttttcaagattttt-tttgtttattctcataaaattaaatgcaaattacattgaattttctctctgttttattttttccattaccaatagccaatg 41086477  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaat 914  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||       ||||| |||||||||||||  |||||||||||||||||||    
T  41086476 aaaattgtttttacatctttatataaaacttttttcaaagaaaacac-aaaaaactataattcaaatttttattatttagttttcttaataaat 41086384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 725 - 918
Target Start/End: Original strand, 26483506 - 26483698
Alignment:
Q  725 ttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaa 824  Q
    |||| |||||||||| |||||| |||||| ||| |||||||| ||||||||||||||||| ||  ||||| ||||| || |||| ||||||| ||| |||    
T  26483506 tttttcaagatttttttttgtt-attctcgtaaaattaaatgtaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaa 26483604  T
Q  825 attgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||       |||||||||||||| ||||||||||||||||||||||| |||||    
T  26483605 attgtttttacatctccctataaaacttttttcaaagaaaacac-aaaaaactatacttcaaattcttatgttttagttttcttaataagtgtga 26483698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 646 - 917
Target Start/End: Original strand, 24892733 - 24893006
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||        || ||||| ||||||      |||||    
T  24892733 ctcattttctttgttccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgttttttaaaaaaatc-tctttcccaagaaaaacttttgt 24892831  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgttt---ttacatcttcc 842  Q
    |||||||||||| |||||||||||||||||||||||||| |  |||||| ||||| || |||||||||||| ||| ||||||||||   ||| ||| |||    
T  24892832 ttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagccaatgaaaattgtttttattatatcctcc 24892931  T
Q  843 tataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtg 917  Q
    |||||||| |||| | ||||||||||       |||||||  ||||| |||||||| |||||||||||||| ||||    
T  24892932 tataaaacgttttccaaagaaaacac-aaaaaactatactctaaattcttatgtttaagttttcttaataagtgtg 24893006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 647 - 867
Target Start/End: Original strand, 8711772 - 8711992
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtt 746  Q
    ||||||| |||||| ||| ||||||  ||||| |||||| |||||||||| ||||||||||||||        || ||||||||||||      ||||||    
T  8711772 tcattttatttgtctcaaaatataaataaaaaagacaaatttttatcctaattaatcttgttttttaaaaaaatc-tcttttccaagaaaaacttttgtt 8711870  T
Q  747 tattctcataata-ttaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    ||||||||||| | ||||||||||||||||||||||||| || |||||| ||||| || |||||||||||| ||| |||||| |||||||||||||||||    
T  8711871 tattctcataaaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattatttttacatcttcctat 8711970  T
Q  846 aaaacttttttcaagaaaacac 867  Q
    |||||||||| ||| |||||||    
T  8711971 aaaactttttccaaaaaaacac 8711992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 650 - 855
Target Start/End: Original strand, 28348511 - 28348713
Alignment:
Q  650 ttttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtttat 749  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||         || |||||||||| |      || ||||||    
T  28348511 ttttctttgtcccaaaatataagaaaaaa-gacaaacttttatcctatttaatcttgttttctaaaaaaatc-tcttttccaatacaaactttggtttat 28348608  T
Q  750 tctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaa 849  Q
    |||||||| |||||||||||||||||||||||||| || |||||| ||||| || |||||||||||| |||  ||||||||||||||| |||||||||||    
T  28348609 tctcataaaattaaatgcaaattacattcaattttctctctctttcatttt-tccataaccaatagccaatggaaattgtttttacatattcctataaaa 28348707  T
Q  850 cttttt 855  Q
    ||||||    
T  28348708 cttttt 28348713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 741 - 867
Target Start/End: Original strand, 31734104 - 31734231
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||| | |||||||||||||||||||||||||| || |||||| ||||| || ||| |||||||| ||| ||||||||||||| |||||    
T  31734104 tttgtttattctcatcaaattaaatgcaaattacattcaattttctctctctttcattttttccatatccaatagccaatgaaaattgtttttatatctt 31734203  T
Q  841 cctataaaacttttttc-aagaaaacac 867  Q
    ||||||||||||||||| ||||||||||    
T  31734204 cctataaaacttttttcaaagaaaacac 31734231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 649 - 841
Target Start/End: Original strand, 7499623 - 7499816
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgttta 748  Q
    |||| |||| |||||| ||||||| ||||| ||||||||| ||| ||||||||||||||||||           ||||||||||||  ||| ||||||||    
T  7499623 atttcctttatcccaaaatataagtaaaaaagacaaacttgtattctatttaatcttgtttttttttttaaatctcttttccaagaaatttttttgttta 7499722  T
Q  749 ttctcataatattaaatgcaaattacattcaattttttcactctttta-ttttctctataaccaatagctaattaaaattgtttttacatcttc 841  Q
    ||||||||| |||||||| ||||||||||||||||| || |||||| | |||| || |||||||||||| ||| ||||||||||||||||||||    
T  7499723 ttctcataaaattaaatgtaaattacattcaattttctctctctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttc 7499816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 735 - 867
Target Start/End: Complemental strand, 15958090 - 15957955
Alignment:
Q  735 tttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactctttt--attttctctataaccaatagctaattaaaattgtttt 832  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||| ||  ||||| || |||||||||||| ||| |||||||||||    
T  15958090 tttttttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagcaaatgaaaattgtttt 15957991  T
Q  833 tacatcttcctataaaacttttttc-aagaaaacac 867  Q
    ||| | ||||||||||||||||||| ||||||||||    
T  15957990 tacttattcctataaaacttttttcaaagaaaacac 15957955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 646 - 867
Target Start/End: Original strand, 35525493 - 35525703
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||        || ||||||||||||      |||||    
T  35525493 ctcattttctttgtcccaaaatataagtaaaaaagacaaacttttatcctatttaatcttgtttttctaaaaaatc-tcttttccaagaaaaacttttgt 35525591  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    ||||||||||||           ||||||||| |||||| || |||||||||||| || |||||||||||  ||| |||||||||||||||||||||| |    
T  35525592 ttattctcataa-----------aattacattaaattttctctctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcctgt 35525680  T
Q  846 aaaacttttttc-aagaaaacac 867  Q
    |||||||||||| ||||||||||    
T  35525681 aaaacttttttcaaagaaaacac 35525703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 646 - 918
Target Start/End: Complemental strand, 13144226 - 13143939
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||| || |||||        | || ||||||||||      |||||    
T  13144226 ctcattttctttgtctcaaaatataagcaaaaaagacaaacttttatcctatttaatattttttttaaaaaaaat-attttttccaagaaaaacttttgt 13144128  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactct---------------tttattttctctataaccaatagctaattaaaattgtt 830  Q
    ||||| |||||| |||||||||||||||||||||||||| || ||||               |||  ||| || |||||||||| ||||| |||||||||    
T  13144127 ttattttcataaaattaaatgcaaattacattcaattttctctctctctctctctctctctctttcatttttccataaccaataactaatgaaaattgtt 13144028  T
Q  831 tttacatcttcctataaaactttttt--caagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||||||||||||||||||||   ||||||||||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  13144027 tttacatcttcctataaaactttttttcaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 13143939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 647 - 918
Target Start/End: Complemental strand, 29920535 - 29920262
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnnt--catcttttccaagatttttctttg 744  Q
    |||||||||||||||| | |||||||||||||  ||||||||||||||||||||||||| |||||           ||||||||||||||      ||||    
T  29920535 tcattttctttgtccctaaatataagcaaaaaacacaaacttttatcctatttaatcttatttttttaaaaaaatacatcttttccaagaaaaccttttg 29920436  T
Q  745 tttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttccta 844  Q
     |||||||||| | ||||||| | ||||||||||||||||  | ||||| |||||| || |||| ||||||| ||| ||||||||||||||||||||| |    
T  29920435 cttattctcatgaaattaaataccaattacattcaattttccctctcttctattttgtccataatcaatagccaatgaaaattgtttttacatcttccca 29920336  T
Q  845 taaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    | |||||| || | |||| |||||        | ||||||||||| ||||||||||||||||||||||| |||||    
T  29920335 tgaaacttattccaaagataacacaaaaaat-tgtacttcaaattcttatgttttagttttcttaataagtgtga 29920262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 741 - 855
Target Start/End: Complemental strand, 35456195 - 35456081
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||||| |||||||| |||||||||||| |||| || |||||||||||| || ||||  |||||| ||| |||||||||||||||||||    
T  35456195 tttgtttattctcataaaattaaatgtaaattacattcatttttctctctcttttattttttccataattaatagccaatgaaaattgtttttacatctt 35456096  T
Q  841 cctataaaacttttt 855  Q
     ||||||||||||||    
T  35456095 tctataaaacttttt 35456081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 646 - 918
Target Start/End: Complemental strand, 4047159 - 4046887
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||        | ||||||||||  |      |||      
T  4047159 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttattctatttaatcttgtttttaaaaaaatt-atcttttccagtaaaaactttttc 4047061  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||| | ||||||||||||||||||| |||||| || |||||||||||| || ||||||||| || ||| |||||| ||||||||| || | ||    
T  4047060 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattatttttacatatttccat 4046961  T
Q  846 aaaactt-ttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
     |||||| || | ||||||||||       |||| || |||||| ||||  |||| |||||||||||| |||||    
T  4046960 gaaacttattataaagaaaacacacaaaaactatgctacaaattcttatactttaattttcttaataagtgtga 4046887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 746 - 856
Target Start/End: Original strand, 2052830 - 2052938
Alignment:
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||| | |||||||||||||||||||||||||| ||  |||| |||||||||  || |||||||| ||| ||||||||||||||||||||| ||    
T  2052830 ttattctcatgaaattaaatgcaaattacattcaattttctc--tcttctattttctccctagccaatagccaatgaaaattgtttttacatcttcccat 2052927  T
Q  846 aaaactttttt 856  Q
    |||||||||||    
T  2052928 aaaactttttt 2052938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 760 - 918
Target Start/End: Complemental strand, 30575987 - 30575828
Alignment:
Q  760 ttaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaa--cttttttc 857  Q
    ||||||||||||||| || |||||| || |||||| ||||| || |||||||||||| ||| |||||||||||||||| ||||| |||||   ||||||     
T  30575987 ttaaatgcaaattacttttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacattttcctgtaaaaacttttttta 30575888  T
Q  858 aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||||       || |||| |||||||||||||||||||||||||||||| |||||    
T  30575887 aagaaaacac-aaaaaactttactccaaatttttatgttttagttttcttaataagtgtga 30575828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 751 - 843
Target Start/End: Complemental strand, 3642130 - 3642039
Alignment:
Q  751 ctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcct 843  Q
    ||||||| || ||||||||||||||||||||||| || |||||| ||||| || |||||||||||| || |||||||||||||||||||||||    
T  3642130 ctcataaaataaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaa-taaaattgtttttacatcttcct 3642039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 649 - 711
Target Start/End: Complemental strand, 30576089 - 30576027
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||    
T  30576089 attttctttgtcccaaaatataagcaaaaaagacaaatttttatcctatttaatcttgttttt 30576027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 746 - 918
Target Start/End: Complemental strand, 8709950 - 8709780
Alignment:
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| ||||||||||||||||||||||  ||||| ||||| ||||||||| |||||  ||||  ||| |||| ||||||||| |||||| ||    
T  8709950 ttattctcataaaattaaatgcaaattacattcaa--ttttctctcttctattttctccataacatatagtcaatgaaaaatgtttttacttcttcccat 8709853  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
     | |||| |||| ||||||||||       ||||||| |||||| ||||||||||||||| ||| ||| |||||    
T  8709852 gagacttatttcaaagaaaacac-aaaaaactatactccaaattcttatgttttagtttttttattaagtgtga 8709780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 759 - 859
Target Start/End: Original strand, 8673388 - 8673488
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| ||||||||||||  || || ||| ||||||||||||| |||   | ||| |||||||||||||||||||| |||||||||| |||||    
T  8673388 attaaatgcaaagtacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcttataaaacttatttca 8673487  T
Q  859 a 859  Q
    |    
T  8673488 a 8673488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 759 - 859
Target Start/End: Complemental strand, 26954545 - 26954445
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | |||||| |||  |  |||||| |||||||| |||||||| | | ||| ||||||||||||||||||||||||||||||| |||||    
T  26954545 attaaatgcaaagtgcattcattttgctttctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatttca 26954446  T
Q  859 a 859  Q
    |    
T  26954445 a 26954445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 759 - 859
Target Start/End: Complemental strand, 41362460 - 41362360
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | |||| |||||  ||||| ||| ||||||||||||| |||   | ||| ||||||||||||||||||||||||||||||| |||||    
T  41362460 attaaatgcaaagtgcatttaatttgctcactttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttca 41362361  T
Q  859 a 859  Q
    |    
T  41362360 a 41362360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 791 - 862
Target Start/End: Original strand, 8745622 - 8745693
Alignment:
Q  791 cttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaagaa 862  Q
    |||||||||| ||||||| ||| | | ||| ||||||||||||||||||||||||||||||| |||||||||    
T  8745622 cttttattttttctataatcaacaaccaatgaaaattgtttttacatcttcctataaaacttatttcaagaa 8745693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 736 - 915
Target Start/End: Complemental strand, 15824807 - 15824634
Alignment:
Q  736 ttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttac 835  Q
    |||| ||||||||||||||| | |||||||| |||||||||| |||||| || |||||  ||||| |  ||||||||||||       ||||||||||||    
T  15824807 ttttttttgtttattctcatgaaattaaatgaaaattacattaaattttctctctcttccatttttttcataaccaatagc------caattgtttttac 15824714  T
Q  836 atcttcctataaaactt-ttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatg 915  Q
    ||||| | || |||||| || | ||||||||||       |||||||||||||| ||||||||||||||||||| ||||||    
T  15824713 atctttccatgaaacttattctaaagaaaacac-aaaaaactatacttcaaattcttatgttttagttttcttactaaatg 15824634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 741 - 867
Target Start/End: Complemental strand, 16879563 - 16879436
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    |||||||||||| || | ||||||| |||| ||||||||||||| || |||||| |||||| | |||| ||||||  ||| |||||||||||||||| ||    
T  16879563 tttgtttattcttatgaaattaaatacaaactacattcaattttctctctctttcattttcaccataatcaatagtcaataaaaattgtttttacatatt 16879464  T
Q  841 cctataaaacttttttc-aagaaaacac 867  Q
    || || ||| || |||| ||||||||||    
T  16879463 cccatgaaatttatttcaaagaaaacac 16879436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 649 - 711
Target Start/End: Complemental strand, 41809065 - 41809003
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    ||||| |||||| ||| ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  41809065 attttttttgtctcaaaatataagcaaaaaagacaaacttttattctatttaatcttgttttt 41809003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 759 - 860
Target Start/End: Original strand, 17713230 - 17713331
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | |||||||| |  || |||||  ||||| || |||||||||| | ||| ||||||||||||| ||||||||||||||||| |||||    
T  17713230 attaaatgcaaagtgcattcaatgtgctctctcttccattttttcaataaccaataaccaatgaaaattgtttttaaatcttcctataaaacttatttca 17713329  T
Q  859 ag 860  Q
    ||    
T  17713330 ag 17713331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 759 - 852
Target Start/End: Original strand, 27819666 - 27819759
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt 852  Q
    |||||||||||| |||||| |||||  || | ||||||||||||||||||||||||   ||| |||| ||||||||||||||  ||||||||||    
T  27819666 attaaatgcaaactacatttaatttgctctcccttttattttctctataaccaataatcaataaaaaatgtttttacatctttatataaaactt 27819759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 805 - 918
Target Start/End: Complemental strand, 16358218 - 16358106
Alignment:
Q  805 ataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagtttt 904  Q
    |||| ||||||  ||| ||||||| |||||||||||||||| |||||||||  |||||||||        ||||||||||||||||||| ||||| ||||    
T  16358218 ataatcaatagtcaatgaaaattgattttacatcttcctatgaaactttttcaaagaaaaca-aaaaaaactatacttcaaatttttatattttaatttt 16358120  T
Q  905 cttaataaatgtga 918  Q
    |||||||| |||||    
T  16358119 cttaataagtgtga 16358106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 789 - 860
Target Start/End: Original strand, 5217429 - 5217500
Alignment:
Q  789 ctcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaag 860  Q
    |||||| |||||||||||||| |||| | ||| ||||||||||||||||||| |||| |||||| |||||||    
T  5217429 ctctttcattttctctataactaataaccaataaaaattgtttttacatctttctatgaaacttatttcaag 5217500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 651 - 702
Target Start/End: Complemental strand, 33563770 - 33563719
Alignment:
Q  651 tttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaat 702  Q
    ||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  33563770 tttctttgtcccaaattataagcaaaaatgataaacttttatcctatttaat 33563719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 791 - 918
Target Start/End: Original strand, 8712563 - 8712690
Alignment:
Q  791 cttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaagaa-aacacnnnnnnnctatacttcaaattt 889  Q
    ||||||||| ||||||||| |||| | ||| ||||||||||||||||||| ||||||||||| || ||| || |||||       ||| ||| ||| ||     
T  8712563 cttttatttgctctataactaataaccaataaaaattgtttttacatctttctataaaacttattccaataataacac-aagaaactaaactgcaagtta 8712661  T
Q  890 ttatgttttagttttcttaataaatgtga 918  Q
     ||||||||||||||||||||||||||||    
T  8712662 ctatgttttagttttcttaataaatgtga 8712690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 759 - 849
Target Start/End: Complemental strand, 25195199 - 25195109
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaa 849  Q
    |||||||||||| | ||||||||||  || || ||| ||||||||||||| |||   | ||| ||||||||||||||||||||||||||||    
T  25195199 attaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaaccaccaatgaaaattgtttttacatcttcctataaaa 25195109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 741 - 859
Target Start/End: Original strand, 41755915 - 41756032
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    |||||||||| |||| | |||||||| |||||||||||||||||||| |||||| ||||| || |||| |||||   ||| || ||| ||||||||| ||    
T  41755915 tttgtttattatcatgaaattaaatgtaaattacattcaattttttctctctttcatttt-tccataagcaataatcaatgaacattatttttacatttt 41756013  T
Q  841 cctataaaacttttttcaa 859  Q
     |||||||| || ||||||    
T  41756014 tctataaaatttatttcaa 41756032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 775 - 852
Target Start/End: Complemental strand, 2628301 - 2628224
Alignment:
Q  775 attcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt 852  Q
    |||||||||  || |||||| |||||||| |||| ||||| | ||| |||||| ||||||||||||||||||||||||    
T  2628301 attcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaactt 2628224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 7022635 - 7022590
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  7022635 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 7022590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 7858456 - 7858501
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  7858456 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 7858501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 646 - 699
Target Start/End: Original strand, 36537974 - 36538027
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctattt 699  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||| ||||||    
T  36537974 ctcattttctttgtctcaaaatataagcaaaaaagacaaacttttatgctattt 36538027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 759 - 859
Target Start/End: Complemental strand, 4039034 - 4038934
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||| ||| | ||||||||||  || || ||| ||||||||||||| |||   | ||| |||||||||||||||||||| |||||||||| |||||    
T  4039034 attaaatgtaaagtgcattcaatttgctctctttttcattttctctataatcaactacaaatgaaaattgtttttacatcttcatataaaacttatttca 4038935  T
Q  859 a 859  Q
    |    
T  4038934 a 4038934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 805 - 860
Target Start/End: Complemental strand, 28497245 - 28497190
Alignment:
Q  805 ataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaag 860  Q
    ||||||||||  |||| ||||||||||||||||||||| ||||||||| |||||||    
T  28497245 ataaccaataagtaatgaaaattgtttttacatcttcccataaaacttatttcaag 28497190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 5217306 - 5217371
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||| ||||  |||||||||||| ||| |||||||||| ||||||||  |||||||    
T  5217306 ctcattttctttgtaccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttt 5217371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 649 - 702
Target Start/End: Original strand, 38072114 - 38072167
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaat 702  Q
    ||||||||||||||||  |||||||||||| ||| |||||||||| ||||||||    
T  38072114 attttctttgtcccaaattataagcaaaaaagaccaacttttatcatatttaat 38072167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 655 - 711
Target Start/End: Original strand, 2052739 - 2052795
Alignment:
Q  655 tttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||| ||| || |||| ||||| || |||||||||||||||||||||||||||||    
T  2052739 tttgtctcaaaatgtaagtaaaaaagataaacttttatcctatttaatcttgttttt 2052795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 698
Target Start/End: Original strand, 11043973 - 11044025
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatt 698  Q
    ||||||||||||||| ||| ||||||||||||| ||| ||||||||| |||||    
T  11043973 ctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 11044025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 759 - 859
Target Start/End: Original strand, 17336749 - 17336849
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | ||||||||||  || |  ||| |||| |||||||| |||   | ||| |||||||||||||||||||||||||||| || |||||    
T  17336749 attaaatgcaaagtgcattcaatttgctctccttttcatttactctataatcaactaccaatgaaaattgtttttacatcttcctataaaatttatttca 17336848  T
Q  859 a 859  Q
    |    
T  17336849 a 17336849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 702
Target Start/End: Original strand, 17713137 - 17713193
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaat 702  Q
    |||||||||||||||||||  |||||| ||||| ||| |||||||||| ||||||||    
T  17713137 ctcattttctttgtcccaaattataagtaaaaaagaccaacttttatcatatttaat 17713193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 698
Target Start/End: Complemental strand, 24612725 - 24612673
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatt 698  Q
    ||||||||||||||| ||| ||||||||||||| ||| ||||||||| |||||    
T  24612725 ctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 24612673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 698
Target Start/End: Original strand, 27621046 - 27621098
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatt 698  Q
    ||||| ||||||||| ||| ||||||||||||| ||||||||||||| |||||    
T  27621046 ctcatattctttgtctcaatatataagcaaaaaagacaaacttttatgctatt 27621098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 651 - 711
Target Start/End: Original strand, 41755824 - 41755884
Alignment:
Q  651 tttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    ||||||| ||| || |||| |||||||| | |||| |||||||||||||||||||||||||    
T  41755824 tttctttatcctaaaatatgagcaaaaaaggcaaatttttatcctatttaatcttgttttt 41755884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 711
Target Start/End: Complemental strand, 374249 - 374190
Alignment:
Q  652 ttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||| |||||| || |||||||||| ||||||  |||||||||||||||| |||||||    
T  374249 ttctttctcccaaaatgtaagcaaaaaagacaaatgtttatcctatttaatcctgttttt 374190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 699
Target Start/End: Original strand, 8673298 - 8673349
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatcctattt 699  Q
    |||||||||||||||||  |||||||||||| ||| |||||||||| |||||    
T  8673298 cattttctttgtcccaaattataagcaaaaaagaccaacttttatcatattt 8673349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 876 - 918
Target Start/End: Original strand, 2052987 - 2053029
Alignment:
Q  876 tatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||| |||| ||||||||||||||||||||||| |||||    
T  2052987 tatacttctaattattatgttttagttttcttaataagtgtga 2053029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 876 - 918
Target Start/End: Original strand, 7756695 - 7756737
Alignment:
Q  876 tatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||||||| || |||||||| |||||||||||||||||    
T  7756695 tatacttcaaattattgtgttttaggtttcttaataaatgtga 7756737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 649 - 699
Target Start/End: Complemental strand, 25321828 - 25321778
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctattt 699  Q
    |||||||||||| ||| ||||||||||||| ||| ||||||||| ||||||    
T  25321828 attttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattt 25321778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 41086619 - 41086573
Alignment:
Q  648 cattttctttgtcccaagatataagca-aaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||||    
T  41086619 cattttctttgtcccaaaatataagcaaaaaaagacaaacttttatc 41086573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 711
Target Start/End: Complemental strand, 44664031 - 44664001
Alignment:
Q  681 acaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||||||||||||||||||||    
T  44664031 acaaacttttatcctatttaatcttgttttt 44664001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 17314744 - 17314809
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||| ||||  |||||||||||| ||  |||||||||| ||||||||  |||||||    
T  17314744 ctcattttctttgttccaaattataagcaaaaaagatcaacttttatcatatttaattatgttttt 17314809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 852
Target Start/End: Complemental strand, 29147390 - 29147297
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt 852  Q
    |||||||||||| | |||| |||||  || |  ||| ||||||||||||| ||| | ||||| |||||||||||| ||||||| ||| ||||||    
T  29147390 attaaatgcaaactgcatttaatttgatctccatttcattttctctataatcaacaactaatgaaaattgtttttccatcttcttattaaactt 29147297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 808
Target Start/End: Complemental strand, 31133182 - 31133133
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataa 808  Q
    |||||||||||||| |||||||||||||| |  |||||||||||| ||||    
T  31133182 attaaatgcaaattgcattcaattttttctcctttttattttctccataa 31133133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 702
Target Start/End: Original strand, 31734008 - 31734065
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaat-gacaaacttttatcctatttaat 702  Q
    |||||||| |||||||||| |||||| ||||||  || ||||||||||||||||||||    
T  31734008 ctcattttttttgtcccaaaatataaacaaaaaaagaaaaacttttatcctatttaat 31734065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 852
Target Start/End: Original strand, 39187241 - 39187334
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt 852  Q
    |||||||||||||| |||||||||| ||| |  |||||||||||| ||||    || | ||| |||||| |||||||||||| | |||||||||    
T  39187241 attaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccataaaactt 39187334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 2e-58; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 646 - 918
Target Start/End: Original strand, 4058609 - 4058881
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||| ||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||        || | ||||||||||      ||| |    
T  4058609 ctcactttctttgtcctaaaatataagcaaaaaagacaaacttttatcctatttaatcttgttttttaaaaaaatctttttttccaagaaaaacttttat 4058708  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| |||||||||||||| ||||||||||| || |||||| ||||| || |||||||||| | ||| ||||||||||||||||||||||||    
T  4058709 ttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaataaccaatgaaaattgtttttacatcttcctat 4058808  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||| ||||||||||       ||||||| |||||| |||||||||||||||||||||||||||||    
T  4058809 aaaacttttttcaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataaatgtga 4058881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 20281562 - 20281757
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |   ||||| ||||| || |||||||||||| |||     
T  20281562 atcttttccaagattttt-tttgtttattctcataaaattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaatg 20281660  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  20281661 aaaattgtttttacatcttcctataaaactttttccaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 20281757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 646 - 918
Target Start/End: Original strand, 39078052 - 39078322
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||| |||||||||        || ||||||||||||      |||||    
T  39078052 ctcattttctttgtcccaaaatataagtaaaaaagacaaacttttatcctatttaaccttgtttttttataaaatc-tcttttccaagaaaaacttttgt 39078150  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||||| |||||||||| ||||||||||||||| |  |||||| ||||| || ||||| |||||| ||| ||||||||||||||||||| ||||    
T  39078151 ttattctcataaaattaaatgcacattacattcaattttctttctctttcattttttcaataactaatagccaatgaaaattgtttttacatctt-ctat 39078249  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||| | ||||||||||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  39078250 aaaactttttccaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 39078322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 2229218 - 2229413
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||| |   ||||| ||||| || |||||||||||| |||     
T  2229218 atcttttccaatatttttttttgtt-attctcataatattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaata 2229316  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  2229317 aaaattgtttttacatcttcctataaaactttttccaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 2229413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 47867850 - 47868045
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||| |||||||||| |||||| |||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| || |||||||||||| |||     
T  47867850 atctttttcaagatttttttttgtt-attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatg 47867948  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  47867949 aaaattgtttttacatcttcctataaaactttttccaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 47868045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 14332730 - 14332926
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| |  ||||||||| || |||     
T  14332730 atcttttccaagatttttttttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttttcataaccaatggccaata 14332829  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||       | ||| | |||||| ||||||||||||||||||||||| |||||    
T  14332830 aaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaacc-atattccaaattcttatgttttagttttcttaataagtgtga 14332926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 730 - 918
Target Start/End: Original strand, 26916304 - 26916491
Alignment:
Q  730 caagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgt 829  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |   ||||| ||||| || |||||||||||| ||| ||||||||    
T  26916304 caagattttt-tttgtttattctcataaaattaaatgcaaattacattcaattttatttttctttcattttttccataaccaatagccaataaaaattgt 26916402  T
Q  830 ttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||||||||||||| ||||||||||       | ||||| |||||| ||||||||||||||||||||||| |||||    
T  26916403 ttttacatcttcctataaaacttttttcaaagaaaacacaaaaaacc-atactccaaattcttatgttttagttttcttaataagtgtga 26916491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 722 - 918
Target Start/End: Complemental strand, 41414790 - 41414597
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||| ||||||||||  ||||||||||| |||| ||||||||||||||||||||||||||||| |||||| ||||| || |||| ||||||| |||     
T  41414790 atctttttcaagattttt--ttgtttattcttataaaattaaatgcaaattacattcaattttttctctctttcattttttc-ataatcaatagccaata 41414694  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||       ||||||| || ||| ||||||||||||||||||||||| |||||    
T  41414693 aaaattgtttttacatcttcctataaaacttttttcaaagaaaacac-aaaaaactatactccatattcttatgttttagttttcttaataagtgtga 41414597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 646 - 912
Target Start/End: Complemental strand, 16605092 - 16604838
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||| ||||||||        || |||||||||||| |||| |||||    
T  16605092 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatgctatttaatattgtttttttaaaaaatc-tcttttccaagaattttttttgt 16604994  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    ||||||||||||           |||||||||||||||| || |||||| ||||| || ||||| |||||| ||| ||||||||||| ||||||||||||    
T  16604993 ttattctcataa-----------aattacattcaattttctctctctttcattttttccataactaatagccaatgaaaattgttttaacatcttcctat 16604905  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataa 912  Q
    |||||||||||| ||||||||||       |||||||  ||||| |||||||||||||||||||||||    
T  16604904 aaaacttttttcaaagaaaacac-aaaaaactatactctaaattcttatgttttagttttcttaataa 16604838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 741 - 918
Target Start/End: Original strand, 20716169 - 20716346
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| || |||||||||||| ||| |||||||||||||||||||    
T  20716169 tttgtttattctcataaaattaaatgcaaattacattcaattttctcactctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 20716268  T
Q  841 cctataaaacttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
     |||||||||||||| |||  |||          ||||||| |||||| ||||||||||||||||||||||| |||||    
T  20716269 tctataaaactttttccaaacaaaagtcaaaagactatactccaaattcttatgttttagttttcttaataagtgtga 20716346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 722 - 867
Target Start/End: Complemental strand, 56318252 - 56318106
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||||||| |||||| |||||||||| |||||| |||||||| ||||||||||||||||| || |||||| ||||| || ||||||||||||||||     
T  56318252 atcttttccaatatttttttttgtttattatcataaaattaaatgtaaattacattcaattttctctctctttcattttttccataaccaatagctaatg 56318153  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacac 867  Q
    ||||||||||||||||||||||||||| |||||| | ||||||||||    
T  56318152 aaaattgtttttacatcttcctataaacctttttccaaagaaaacac 56318106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 741 - 918
Target Start/End: Complemental strand, 5483441 - 5483264
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||| | |||||||||| ||||||||||||||| || |||||  |||||||| ||||||| |||| ||| |||||||||||||||||||    
T  5483441 tttgtttattctcatgaaattaaatgcatattacattcaattttctctctcttccattttctccataaccagtagccaatgaaaattgtttttacatctt 5483342  T
Q  841 cctataaaactt-ttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||| |||||| |||| ||||||||||        |||||||||||||||||||||||||||||||||| || |||||    
T  5483341 cctattaaacttattttaaagaaaacacaaaaaat-tatacttcaaatttttatgttttagttttcttaacaagtgtga 5483264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 741 - 918
Target Start/End: Original strand, 29203495 - 29203672
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||||| |||||||||||||||||||||||||| || |||||| ||||| || |||||||||||| ||| |||||||||||||||||||    
T  29203495 tttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 29203594  T
Q  841 cctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||   ||| | ||||||||||        |||||| |||||| ||||||||||||||||||||||| |||||    
T  29203595 cctataaaaaaatttgcaaagaaaacacaaaaaat-tatactccaaattcttatgttttagttttcttaataagtgtga 29203672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 722 - 918
Target Start/End: Complemental strand, 28669181 - 28668987
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||| |||||||||| ||||||||||||||||| ||||||| |||||||||||||||||| || |||||| ||||| || ||||| |||| | |||     
T  28669181 atctttttcaagattttt-tttgtttattctcataaaattaaatacaaattacattcaattttctctctctttcattttttc-ataactaataaccaatg 28669084  T
Q  822 aaaattgtttttacatcttcctataaaa-cttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||| ||||||||||| ||||| | ||||||||||       |||||||| ||||| ||||||||||||||||||||||| |||||    
T  28669083 aaaattgtttttacattttcctataaaaccttttctaaagaaaacac-aaaaaactatactttaaattcttatgttttagttttcttaataagtgtga 28668987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 648 - 840
Target Start/End: Original strand, 35529568 - 35529760
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgttt 747  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||           ||||||||||||      |||||||    
T  35529568 cattttctttgtcccaaaatataagcaaaaaagacaaacttttattctatttaatcttgttttttttaaaaaatctcttttccaagaaaaagttttgttt 35529667  T
Q  748 attctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    || ||||||| |||||||||||||||| ||||||||| || |||||| ||||| || |||||||||| | ||| |||||||||||||||||||    
T  35529668 atgctcataaaattaaatgcaaattactttcaattttatctctctttcattttttccataaccaatacccaatgaaaattgtttttacatctt 35529760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 655 - 918
Target Start/End: Original strand, 10069600 - 10069863
Alignment:
Q  655 tttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtt-tttnnnnnnnntcatcttttccaagatttttctttgtttattctc 753  Q
    |||||||||| ||||||||||||| || |||||||||||||||||||||||||| |||        || ||||| ||||||      |||||||||||||    
T  10069600 tttgtcccaaaatataagcaaaaaagaaaaacttttatcctatttaatcttgttcttttaaaaaaatc-tctttcccaagaaaaacttttgtttattctc 10069698  T
Q  754 ataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttt 853  Q
    |||| ||||||||||||| ||||||||||||     ||||| | ||| || |||||||||||| ||| ||||||||||||||||||| ||||||||||||    
T  10069699 ataaaattaaatgcaaataacattcaattttccttttctttcactttttccataaccaatagccaatgaaaattgtttttacatctttctataaaacttt 10069798  T
Q  854 tttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||| ||||||| ||       ||||||| |||||| ||||||||||||||| ||||||| |||||    
T  10069799 tttcgaagaaaatac-aaaaaactatactacaaattcttatgttttagttttattaataagtgtga 10069863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 646 - 914
Target Start/End: Complemental strand, 35311000 - 35310732
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||||||||||||||  || ||||||||||||| |||||||||||||  |||||||||||||||||        ||||||||| ||| |      |||||    
T  35311000 ctcattttctttgtcttaaaatataagcaaaaaagacaaacttttattatatttaatcttgttttttaaaaaaatcatctttttcaataaaaacttttgt 35310901  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||| | ||||||| ||||||||||| |||||| || |||||  ||||| || |||||||||||| ||| ||||||||||||||||||| | ||    
T  35310900 ttattctcatgaaattaaatacaaattacatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatctttccat 35310801  T
Q  846 aaaactt-ttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaat 914  Q
     |||||| || | ||||||||||       |||| || |||||| |||||||||||||||||||||||||    
T  35310800 gaaacttattctaaagaaaacac-aaaaaactatgctacaaattcttatgttttagttttcttaataaat 35310732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 666 - 918
Target Start/End: Complemental strand, 17794781 - 17794527
Alignment:
Q  666 atataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttc---tttgtttattctcataatatta 762  Q
    ||||||||||||| || |||||||||||||||||||||||||||||        ||||||||||||| | |       ||||||||||||||||| ||||    
T  17794781 atataagcaaaaa-gataaacttttatcctatttaatcttgtttttttaaaatatcatcttttccaataataaaaacttttgtttattctcataaaatta 17794683  T
Q  763 aatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttc-aaga 861  Q
    |||| ||||||||||||||||| || |||||  | ||| || |||| ||||||| ||| |||||||||||||||||||||||||||| || |||| ||||    
T  17794682 aatgtaaattacattcaattttctctctcttccaatttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaatttatttcaaaga 17794583  T
Q  862 aaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||| |       |||||||||||||| || | |||||||||||||||||| |||||    
T  17794582 aaacgc-aaaaaactatacttcaaattctttttttttagttttcttaataagtgtga 17794527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 646 - 918
Target Start/End: Complemental strand, 48793883 - 48793616
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||||||||||||        ||||||||||||| |      |||      
T  48793883 ctcattttctttgtcccaaaatataagcataaaagacaaacttttattctatttaatcttgttttt-taaaaaatcatcttttccaataaaaactttttc 48793785  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctat 845  Q
    |||||||||| | ||||||||||||||||||| ||  ||||| |||||||||||| |  ||||||||| || ||| ||||||||||||||||||||| ||    
T  48793784 ttattctcatgaaattaaatgcaaattacatttaa--ttttctctcttttatttttttcataaccaattgccaatgaaaattgtttttacatcttcccat 48793687  T
Q  846 aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
     |||||| || | ||||||||||       |||| || |||||| ||||| ||||||||||||||||| |||||    
T  48793686 gaaacttattccaaagaaaacac---aaaactatgctacaaattcttatgctttagttttcttaataagtgtga 48793616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 741 - 918
Target Start/End: Original strand, 55580658 - 55580836
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttct-ctataaccaatagctaattaaaattgtttttacatct 839  Q
    ||||||||||||||||| ||||||||||||||||||| || ||| ||  ||||| ||||| | | ||||| |||||| ||| ||||||||||||||||||    
T  55580658 tttgtttattctcataaaattaaatgcaaattacattaaaatttctctttctttcatttttttccataactaatagccaatgaaaattgtttttacatct 55580757  T
Q  840 tcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||| |||||||| | |||||||||        ||||||| |||||| |||||||| ||||||||||||||||||||    
T  55580758 tcctatacaactttttccaaagaaaaca-aaaaaaactatactccaaattcttatgtttcagttttcttaataaatgtga 55580836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 768 - 918
Target Start/End: Original strand, 7654633 - 7654783
Alignment:
Q  768 aaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttc-aagaaaaca 866  Q
    ||||||||||||||||| ||  ||||| ||||| || |||| ||||||| ||| ||||||||||||| |||||||||||||||||||| | |||||||||    
T  7654633 aaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttatatcttcctataaaactttttccaaagaaaaca 7654732  T
Q  867 cnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |       ||||||| |||||||||||||||||||||||||||||| |||||    
T  7654733 c-aaaaaactatactccaaatttttatgttttagttttcttaataagtgtga 7654783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 752 - 918
Target Start/End: Original strand, 24940365 - 24940531
Alignment:
Q  752 tcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaact 851  Q
    |||||| |||||||| |||||||||| |||||| || |||||| |||||||| |||||||||| | ||  |||||||||||||||||||| |||||||||    
T  24940365 tcataaaattaaatggaaattacatttaattttctctctctttcattttctccataaccaataaccaacgaaaattgtttttacatcttcttataaaact 24940464  T
Q  852 tttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||| | ||||||| ||       ||||||| |||||| ||| |||||||||||||||||||||||||    
T  24940465 ttttccaaagaaaatac-aaaaaactatactccaaattcttacgttttagttttcttaataaatgtga 24940531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 666 - 837
Target Start/End: Complemental strand, 8683541 - 8683373
Alignment:
Q  666 atataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtttattctcataatattaaat 765  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||        ||||||||||||| |||||| ||| || |||||||| | |||||||    
T  8683541 atataagcaaaaaagacaaacttttattctatttaatcttgtttttaaaaaaaatcatcttttccaatatttttttttctt-attctcatgaaattaaat 8683443  T
Q  766 gcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacat 837  Q
     ||||||||||| |||||| ||  ||||||||||| || ||||||||| || ||| |||||| |||||||||    
T  8683442 acaaattacatttaattttctc--tcttttattttttccataaccaattgccaatgaaaattatttttacat 8683373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 647 - 835
Target Start/End: Complemental strand, 52535843 - 52535654
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaact-tttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||||||| ||||||||| ||||||||||||| || ||| | ||||||||||||||||||||||||           ||||||||||||      |||||    
T  52535843 tcattttcattgtcccaaaatataagcaaaaaagataaaatatttatcctatttaatcttgtttttttaaaaaaatctcttttccaagaaaaacttttgt 52535744  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttac 835  Q
    |||||||||||| ||||||||||||||| |||||||||| || |||||| | ||| ||||||||||||||| ||| |||||| |||||||    
T  52535743 ttattctcataaaattaaatgcaaattatattcaattttctctctctttcactttttctataaccaatagccaatgaaaattatttttac 52535654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 741 - 867
Target Start/End: Complemental strand, 1585510 - 1585383
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| || |||||  |||||||| |||| ||||||| ||| ||||||||||| |||||||    
T  1585510 tttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctccataatcaatagccaataaaaattgttttaacatctt 1585411  T
Q  841 cctataaaacttttttc-aagaaaacac 867  Q
     | || |||||| |||| ||||||||||    
T  1585410 tccatgaaacttatttcaaagaaaacac 1585383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 649 - 840
Target Start/End: Original strand, 42915427 - 42915618
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgttta 748  Q
    |||||||||||||||| ||||||||||||| |||||||||||||  |||||||||||||||||        |||| |||||||| |      |||  |||    
T  42915427 attttctttgtcccaaaatataagcaaaaaagacaaacttttattatatttaatcttgtttttaaaaaaa-tcatattttccaataaaaactttttctta 42915525  T
Q  749 ttctcataatattaaatgcaaattacattcaattttttcactctttta-ttttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||| | ||||||||||||||||||| |||||| || |||||||| |||| || ||||||||| || ||| |||||||||||||||||||    
T  42915526 ttctcatgaaattaaatgcaaattacatttaattttctctctcttttatttttttccataaccaattgccaatgaaaattgtttttacatctt 42915618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 646 - 840
Target Start/End: Complemental strand, 12002892 - 12002704
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||| |||||||||||| | || |||||||||| ||||||||||||| ||||||||||||||||||         |||||||||||||  |||| ||||     
T  12002892 ctcactttctttgtccctaaatgtaagcaaaaaagacaaacttttattctatttaatcttgtttttttaaaaaaccatcttttccaaggatttt-tttgc 12002794  T
Q  746 ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||| |||| | ||||||||||||||||||||||| |     |||||  | |||||| ||||||||| || ||| |||||||||||||||||||    
T  12002793 ttattttcatgaaattaaatgcaaattacattcaatat-----ctcttccagtttctccataaccaatggccaataaaaattgtttttacatctt 12002704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 721 - 840
Target Start/End: Complemental strand, 25297405 - 25297286
Alignment:
Q  721 catcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaat 820  Q
    |||| ||| |||||||||| |||| |||||||||| | |||||||| |||||||||||||||||    ||||| ||||||||| |||| ||||||| |||    
T  25297405 catcattttcaagatttttttttgcttattctcatgaaattaaatgtaaattacattcaattttccatctcttctattttctccataatcaatagccaat 25297306  T
Q  821 taaaattgtttttacatctt 840  Q
     |||||||||||||||||||    
T  25297305 gaaaattgtttttacatctt 25297286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 646 - 711
Target Start/End: Complemental strand, 17187039 - 17186974
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  17187039 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcatgttttt 17186974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 759 - 859
Target Start/End: Complemental strand, 8178384 - 8178284
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | ||||||||||  || |||||| |||||||| |||||||||| | |||  ||||||||||||||||||| |||||||||| |||||    
T  8178384 attaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaatacaaattgtttttacatcttcttataaaacttatttca 8178285  T
Q  859 a 859  Q
    |    
T  8178284 a 8178284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 646 - 784
Target Start/End: Complemental strand, 32280245 - 32280107
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgt 745  Q
    |||| ||| |||||| ||| || ||| ||||||||| ||||||||||  |||||||||||||||||          ||||||| |||||||||| ||||     
T  32280245 ctcactttatttgtctcaaaatgtaaacaaaaatgataaacttttataatatttaatcttgtttttttaaaaaactatctttttcaagatttttttttgc 32280146  T
Q  746 ttattctcataatattaaatgcaaattacattcaatttt 784  Q
    |||||||||| | | ||||||||||||||||||||||||    
T  32280145 ttattctcatgaaactaaatgcaaattacattcaatttt 32280107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 759 - 859
Target Start/End: Complemental strand, 46070665 - 46070567
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | ||||||||||  ||  ||||| |||||||| |||||||| | | ||| ||||||||||||||||||||||||||||||| |||||    
T  46070665 attaaatgcaaagtgcattcaatttactc--tctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatttca 46070568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 759 - 859
Target Start/End: Complemental strand, 5064800 - 5064700
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | ||||||||||  || || ||| ||||||||||||| |||   ||||| |||||||||||||||||||||| |||||||| |||||    
T  5064800 attaaatgcaaagtgcattcaatttactctctttttcattttctctataatcaactactaatgaaaattgtttttacatcttcctttaaaacttatttca 5064701  T
Q  859 a 859  Q
    |    
T  5064700 a 5064700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 646 - 710
Target Start/End: Original strand, 55580562 - 55580625
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttt 710  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||| || |||||||||||||||    
T  55580562 ctcattttctttgtcccaaaatataagcaaaaaagacaaactttta-cccatttaatcttgtttt 55580625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 759 - 860
Target Start/End: Complemental strand, 8013234 - 8013133
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    ||||||||||| || |||||| | | ||| |||||| ||||||||||| || |||| | ||| ||||||||||||||||||| |||| |||||| |||||    
T  8013234 attaaatgcaatttgcattcattatgttctctctttcattttctctatgactaataaccaataaaaattgtttttacatctttctatgaaacttatttca 8013135  T
Q  859 ag 860  Q
    ||    
T  8013134 ag 8013133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 658 - 711
Target Start/End: Original strand, 29203414 - 29203467
Alignment:
Q  658 gtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||||||||||    
T  29203414 gtcccaaaatataagcaaaaaagacaaacttttatcttatttaatcttgttttt 29203467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 759 - 850
Target Start/End: Complemental strand, 23978260 - 23978169
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaac 850  Q
    |||||||||||| | ||||||||||  || || ||| ||||||||||||| |||   | ||| |||||||||||||||||||||||||||||    
T  23978260 attaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaac 23978169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 761 - 851
Target Start/End: Complemental strand, 17799277 - 17799187
Alignment:
Q  761 taaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaact 851  Q
    |||||||||||| |||| ||||| ||| | || | |||||||| ||||| |||| | ||| ||||||||||||||||||||| ||||||||    
T  17799277 taaatgcaaattgcatttaatttgttctccctctcattttctccataacaaataaccaatgaaaattgtttttacatcttcccataaaact 17799187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 789 - 859
Target Start/End: Complemental strand, 47516306 - 47516236
Alignment:
Q  789 ctcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaa 859  Q
    |||||| |||||||| |||||||| | | ||| |||||||||||||| |||||||||||||||| ||||||    
T  47516306 ctctttcattttctcaataaccaacaaccaatgaaaattgtttttacttcttcctataaaacttatttcaa 47516236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 2229175 - 2229220
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  2229175 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 2229220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 763 - 860
Target Start/End: Complemental strand, 5841920 - 5841823
Alignment:
Q  763 aatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaag 860  Q
    |||||||| | || |||||||  || |||||| ||||| || |||||||||| | ||| |||||| ||||||||||||||||||||| || |||||||    
T  5841920 aatgcaaagtgcaatcaatttgctctctctttcattttttcaataaccaataaccaatgaaaattatttttacatcttcctataaaatttatttcaag 5841823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 14332687 - 14332732
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  14332687 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 14332732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 741 - 918
Target Start/End: Original strand, 14583718 - 14583895
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    |||| |||||||||| | |||||||||||||||||||||||| |  | |||||  ||||||| | ||| | ||||| ||| |||| ||||||||||||||    
T  14583718 tttgcttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaa-tgtttttacatctt 14583816  T
Q  841 cctataaaactt-ttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    || || |||||| |||| |||||||          |||||  | ||||| |||| ||||||||||||||||||||||||    
T  14583817 cccatgaaacttattttaaagaaaaacacaaataactatatattaaattcttatattttagttttcttaataaatgtga 14583895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 30245030 - 30245094
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||| ||||| |||| || |||||||||| ||||||| ||||||||||||||||||||||||    
T  30245030 ctcatttt-tttgttccaaaatgtaagcaaaaaagacaaacgtttatcctatttaatcttgttttt 30245094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 759 - 859
Target Start/End: Original strand, 32410335 - 32410435
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaa-tagctaattaaaattgtttttacatcttcctataaaacttttttc 857  Q
    |||||||||||| |  |||||||||  || || |||||||||||||||||  || |||| ||| |||||| |||||||||||||||||||||||| ||||    
T  32410335 attaaatgcaaagtgtattcaatttgctctcttttttattttctctataattaactagc-aatgaaaattatttttacatcttcctataaaacttatttc 32410433  T
Q  858 aa 859  Q
    ||    
T  32410434 aa 32410435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 725 - 834
Target Start/End: Complemental strand, 50080630 - 50080521
Alignment:
Q  725 ttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaa 824  Q
    |||| ||||| |||| |||| |||||| ||| | ||||||||||||||||||||||||||  | |||||  ||||| || |||| ||||||| ||| |||    
T  50080630 tttttcaagaattttttttgcttattcgcatgaaattaaatgcaaattacattcaattttcactctcttccattttatccataatcaatagccaataaaa 50080531  T
Q  825 attgttttta 834  Q
    |||| |||||    
T  50080530 attggtttta 50080521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 698
Target Start/End: Complemental strand, 32012537 - 32012485
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatt 698  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||| |||||    
T  32012537 ctcattttctttgtctcaaaatataagcaaaaaagacaaacttttatgctatt 32012485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 741 - 914
Target Start/End: Complemental strand, 32323424 - 32323252
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    |||| ||||| |||| | |||||||| ||||||| ||||||||| || |||||  |||||||| |||| |||  |  ||| |||||||||||||||||||    
T  32323424 tttgcttattatcatgaaattaaatgtaaattac-ttcaattttctctctcttccattttctcaataatcaagcgtcaatgaaaattgtttttacatctt 32323326  T
Q  841 cctataaaactt-ttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaat 914  Q
    || ||||| ||| |||| ||||||||||       | ||||||||||||||||  ||||| ||||||||| ||||    
T  32323325 cccataaatcttattttaaagaaaacac-aaaaaacaatacttcaaatttttaaattttaattttcttaacaaat 32323252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 759 - 859
Target Start/End: Original strand, 49080264 - 49080364
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | ||||||||||  || || ||| |||||| || ||| |||   | ||| ||||||||||||||||||||||||||||||| |||||    
T  49080264 attaaatgcaaagtgcattcaatttgatctctttttcattttccctgtaatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttca 49080363  T
Q  859 a 859  Q
    |    
T  49080364 a 49080364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 652 - 711
Target Start/End: Original strand, 19351740 - 19351799
Alignment:
Q  652 ttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||| |||||| || |||| ||||| ||||||||||||| ||||||||||||||||||    
T  19351740 ttctttatcccaaaatgtaagaaaaaaagacaaacttttattctatttaatcttgttttt 19351799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 741 - 852
Target Start/End: Original strand, 50145725 - 50145836
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||| |||| |||| | ||||||||  ||||||||| ||||||  | |||||  |||||||| || | ||||||| ||| |||||||| ||||||||||    
T  50145725 tttgtatattttcatgaaattaaatgttaattacatttaattttccctctcttccattttctccattatcaatagccaatgaaaattgtgtttacatctt 50145824  T
Q  841 cctataaaactt 852  Q
    || |||||||||    
T  50145825 cccataaaactt 50145836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 759 - 867
Target Start/End: Original strand, 5815476 - 5815585
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttc- 857  Q
    ||||||||  |||||||||||||||| || |||||   |||| || |||| ||||||  ||| |||||| |||||||||||||  ||||||||| ||||     
T  5815476 attaaatgtcaattacattcaattttctctctcttcctttttttccataatcaatagtcaataaaaattatttttacatcttctcataaaacttatttca 5815575  T
Q  858 aagaaaacac 867  Q
    ||||||||||    
T  5815576 aagaaaacac 5815585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 28669224 - 28669179
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||| |||||| |||||||    
T  28669224 cattttctttgtcccaaaatataagcaaaaaggacaaatttttatc 28669179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 759 - 852
Target Start/End: Original strand, 37911891 - 37911984
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt 852  Q
    |||||||||||| | |||| |||||  || || ||||||||||||||||| |||   | ||| |||||||||||||||| || |||||||||||    
T  37911891 attaaatgcaaagtgcattgaatttgctctcttttttattttctctataatcaactaccaatgaaaattgtttttacatatttctataaaactt 37911984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 41414833 - 41414788
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  41414833 cattttctttgtcccaaaatataagtaaaaaagacaaacttttatc 41414788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 47867807 - 47867852
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||    
T  47867807 cattttctttgtcccaaaatataagcaaaaaagaaaaacttttatc 47867852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 646 - 699
Target Start/End: Original strand, 50768355 - 50768408
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctattt 699  Q
    ||||||||||||||| ||| ||||||||||||| ||| ||||||||| ||||||    
T  50768355 ctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattt 50768408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 702
Target Start/End: Complemental strand, 8013327 - 8013271
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaat 702  Q
    |||||||||||||||||||  |||||| ||||| ||| |||||||||| ||||||||    
T  8013327 ctcattttctttgtcccaaattataagtaaaaaagaccaacttttatcatatttaat 8013271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 875 - 914
Target Start/End: Original strand, 7438771 - 7438810
Alignment:
Q  875 ctatacttcaaatttttatgttttagttttcttaataaat 914  Q
    ||||||| |||||| |||||||||||||||||||||||||    
T  7438771 ctatactccaaattattatgttttagttttcttaataaat 7438810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 875 - 918
Target Start/End: Complemental strand, 12002662 - 12002619
Alignment:
Q  875 ctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||| |||||| ||||||||||||||||||||||| |||||    
T  12002662 ctatactccaaattcttatgttttagttttcttaataagtgtga 12002619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 790 - 849
Target Start/End: Complemental strand, 17186909 - 17186850
Alignment:
Q  790 tcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaa 849  Q
    ||||| ||||| || |||||||||||| ||| ||| || |||||||||||||||||||||    
T  17186909 tctttcattttttccataaccaatagccaatgaaacttatttttacatcttcctataaaa 17186850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 695
Target Start/End: Original strand, 26916253 - 26916300
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatcct 695  Q
    ||||||||||||| ||| ||||||||||||| || |||||||||||||    
T  26916253 cattttctttgtctcaaaatataagcaaaaaagataaacttttatcct 26916300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 759 - 850
Target Start/End: Original strand, 40411108 - 40411199
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaac 850  Q
    |||||||| ||| | ||||||||||  || || ||| ||||||||| ||| |||   | ||| |||||||||||||||||||||||||||||    
T  40411108 attaaatgtaaactgcattcaatttgatctctttttcattttctctgtaatcaactaccaataaaaattgtttttacatcttcctataaaac 40411199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 646 - 692
Target Start/End: Complemental strand, 29180622 - 29180576
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttat 692  Q
    ||||| ||||||||| ||| ||||||||||||| |||||||||||||    
T  29180622 ctcatattctttgtctcaaaatataagcaaaaaagacaaacttttat 29180576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 822 - 852
Target Start/End: Original strand, 29511495 - 29511525
Alignment:
Q  822 aaaattgtttttacatcttcctataaaactt 852  Q
    |||||||||||||||||||||||||||||||    
T  29511495 aaaattgtttttacatcttcctataaaactt 29511525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 648 - 698
Target Start/End: Complemental strand, 30012161 - 30012111
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatt 698  Q
    ||||||||||||||||| ||||||||||||| ||  ||||||||| |||||    
T  30012161 cattttctttgtcccaaaatataagcaaaaaagatcaacttttattctatt 30012111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 818 - 860
Target Start/End: Original strand, 53848526 - 53848568
Alignment:
Q  818 aattaaaattgtttttacatcttcctataaaacttttttcaag 860  Q
    |||||||||||||||||| ||||||||||||| || |||||||    
T  53848526 aattaaaattgtttttacgtcttcctataaaaattatttcaag 53848568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 7654555 - 7654600
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    |||||||||| ||| || ||||||||||||| ||||||||||||||    
T  7654555 cattttctttatcctaaaatataagcaaaaaagacaaacttttatc 7654600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 711
Target Start/End: Complemental strand, 23978353 - 23978288
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||| ||||||  ||||||| |||| ||| |||||||||| ||||||||  |||||||    
T  23978353 ctcattttctttatcccaaattataagcgaaaaagaccaacttttatcatatttaattatgttttt 23978288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 848
Target Start/End: Complemental strand, 28318562 - 28318473
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaa 848  Q
    |||||||| ||| | ||||||||||  |  || ||| ||||||||||||| |||   | ||| |||||||||||||||||||||||||||    
T  28318562 attaaatgtaaaatgcattcaatttactagctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaa 28318473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 711
Target Start/End: Complemental strand, 28318655 - 28318590
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||||||||  | ||||||||||  || |||||||||| ||||||||  |||||||    
T  28318655 ctcattttctttgtcccaaattgtaagcaaaaaaaactaacttttatcatatttaattatgttttt 28318590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 808
Target Start/End: Complemental strand, 32012445 - 32012396
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataa 808  Q
    |||||||||||||| |||||||||| ||| |  |||||||||||||||||    
T  32012445 attaaatgcaaattgcattcaatttattctcctttttattttctctataa 32012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 37911798 - 37911863
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||||||||||  |||||| ||||| ||| || ||||||| ||||||||  |||||||    
T  37911798 ctcattttctttgtcccaaattataagtaaaaaagactaaattttatcatatttaattatgttttt 37911863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 100; Significance: 6e-49; HSPs: 2)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 722 - 918
Target Start/End: Complemental strand, 761 - 566
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| || |||||||||||| |||     
T  761 atcttttccaagatttttttttgtt-attctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatg 663  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  662 aaaattgtttttacatctccctataaaacttttttcaaagaaaacac-ataaaactatactccaaattcttatgttttagttttcttaataagtgtga 566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 804 - 759
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    |||||||||||| |||| |||||||||||||  |||||||||||||    
T  804 cattttctttgtaccaaaatataagcaaaaaacacaaacttttatc 759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 1e-46; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 21542391 - 21542586
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||| |   ||||| ||||| || |||||||||||| |||     
T  21542391 atcttttccaatatttttttttgtt-attctcataatattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaata 21542489  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  21542490 aaaattgtttttacatcttcctataaaactttttccaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 21542586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 722 - 912
Target Start/End: Complemental strand, 11082434 - 11082244
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||| |||||||||| |||  |||||||||||| |||||||||||||||||||||||||| ||  ||||| ||||| || |||||||||||| |||     
T  11082434 atctttttcaagattttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatg 11082335  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataa 912  Q
    |||||||||||||||||| ||||||||||||||| | ||||||||||       ||||||| |||||| |||||||||||||||||||||||    
T  11082334 aaaattgtttttacatctccctataaaactttttccaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataa 11082244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 722 - 914
Target Start/End: Complemental strand, 3095909 - 3095717
Alignment:
Q  722 atcttttccaagatttttctttgt-ttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaat 820  Q
    |||||||||||||||||| ||| | |||||||||||| |||||||||||||||||||||||||| ||  | ||| ||||| || |||| ||||||| |||    
T  3095909 atcttttccaagatttttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttatttcattttttccataatcaatagccaat 3095810  T
Q  821 taaaattgtttttacatcttcctataaaacttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaat 914  Q
     |||||||||||||||||||||||||||||||||   ||||||||||       ||||||| |||||||||||| |||||||||||||||||||    
T  3095809 gaaaattgtttttacatcttcctataaaacttttccaaagaaaacac-aaaaaactatactccaaatttttatgctttagttttcttaataaat 3095717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 722 - 918
Target Start/End: Complemental strand, 35129243 - 35129047
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| ||  ||||| ||||| || |||||||||| | |||     
T  35129243 atcttttccaagatttttttttgtt-attctcgtaaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatg 35129145  T
Q  822 aaaattgttt-ttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||| |||||||||||||||||||||||| | ||||||||||       ||||||| |||||| ||||||||||||||||||||||| |||||    
T  35129144 aaaattgtttattacatcttcctataaaactttttccaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 35129047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 722 - 918
Target Start/End: Complemental strand, 34177829 - 34177634
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||| | ||  ||||| ||||| || |||||||||||| |||     
T  34177829 atcttttccaagatttttttttgtt-attctcataaaattaaatgcaaattacattcaattatctctttctttcattttttccataaccaatagccaatg 34177731  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||||||||||| ||||||||  ||||| | ||||||||||       ||||| | |||||| |||||||||| |||||||||||| |||||    
T  34177730 aaaattgtttttacatctccctataaatttttttccaaagaaaacac-aaaaaactatattccaaattcttatgttttaattttcttaataagtgtga 34177634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 659 - 914
Target Start/End: Complemental strand, 30794441 - 30794189
Alignment:
Q  659 tcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtttattctcataat 758  Q
    |||||| |||||||||| || |||||||||| |||||||||||| || |||||         ||||||||| || | |||| ||| ||||||||||| |     
T  30794441 tcccaaaatataagcaacaaagacaaactttaatcctatttaatatttttttttcaaac---catcttttcaaataattttttttttttattctcatgaa 30794345  T
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttc- 857  Q
    ||||||||||||||| ||| |||||| || ||||| ||||||||| || ||||||||| ||| |||| |||||||||||||||||||||||||| || |     
T  30794344 attaaatgcaaattagatttaattttctctctcttctattttctccatcaccaatagccaatgaaaaatgtttttacatcttcctataaaacttattcca 30794245  T
Q  858 aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaat 914  Q
    || ||||||         ||||||||||||| |||| ||||||||||||||||||||    
T  30794244 aataaaaca-taaaaaattatacttcaaattcttatattttagttttcttaataaat 30794189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 741 - 918
Target Start/End: Complemental strand, 12461599 - 12461422
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| |  ||||| ||||||||| |||||||||||| ||| |||||||||||||||||||    
T  12461599 tttgtttattctcatgaaattaaatccaaattacattcaattttctgtctcttctattttctccataaccaatagccaatgaaaattgtttttacatctt 12461500  T
Q  841 cctat-aaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
     |||| ||||||| |||| ||||||| |        ||||| | |||||| | |||||||||||||||||||||||||||    
T  12461499 tctataaaaacttatttcaaagaaaata--aaaaaactatattccaaattctcatgttttagttttcttaataaatgtga 12461422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 646 - 918
Target Start/End: Complemental strand, 7275141 - 7274868
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnn-tcatcttttccaagatttttctttg 744  Q
    |||||||| ||||||  || |||||||||||||  ||||||||||||  |||||||||||||||||         ||||||||||||| |      ||||    
T  7275141 ctcattttatttgtcttaaaatataagcaaaaaatacaaacttttattatatttaatcttgtttttaaaaaaaaatcatcttttccaataaaaacttttg 7275042  T
Q  745 tttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttccta 844  Q
     |||||||||| | ||||||| ||||||||||| |||||| || |||||| ||||| || |||||||||||| ||| ||||||||||||||||||||| |    
T  7275041 cttattctcatgaaattaaatacaaattacatttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttccca 7274942  T
Q  845 taaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    | |||||| || | ||||||| ||       |||| || |||||| ||||||||||||||||||||||| |||||    
T  7274941 tgaaacttattccaaagaaaatac-aaaaaactatgctacaaattcttatgttttagttttcttaataagtgtga 7274868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 736 - 867
Target Start/End: Original strand, 31107177 - 31107308
Alignment:
Q  736 ttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttac 835  Q
    |||| |||||||||||| |||| ||||||||||||||||||||||||| ||  |||||| ||||| ||||||| ||||||  ||| |||||  |||||||    
T  31107177 ttttttttgtttattcttataaaattaaatgcaaattacattcaatttctt-tctctttcattttttctataatcaatagtcaataaaaatcatttttac 31107275  T
Q  836 atcttcctataaaacttttttc-aagaaaacac 867  Q
    || ||| ||||||  ||||||| ||||||||||    
T  31107276 attttcttataaattttttttcaaagaaaacac 31107308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 741 - 816
Target Start/End: Original strand, 9428761 - 9428836
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagc 816  Q
    ||||||||||||||||| ||| ||||||||||| ||| |||||| || |||||||||||| |||||||||||||||    
T  9428761 tttgtttattctcataaaatttaatgcaaattatatttaattttctctctcttttattttttctataaccaatagc 9428836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 759 - 859
Target Start/End: Original strand, 16524387 - 16524486
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | |||||||||| ||| || ||| ||||||||||||| |||   | ||| ||||||||||||||||||||||||||||||| |||||    
T  16524387 attaaatgcaaagtgcattcaatttgttctct-tttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttca 16524485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 759 - 859
Target Start/End: Original strand, 3888434 - 3888534
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | |||||||||| ||| || ||| ||||||||||||| |||   |  || |||||||||| |||||||||||||||||||| |||||    
T  3888434 attaaatgcaaagtgcattcaatttgttctctttttcattttctctataatcaactacccatgaaaattgtttctacatcttcctataaaacttatttca 3888533  T
Q  859 a 859  Q
    |    
T  3888534 a 3888534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 759 - 859
Target Start/End: Original strand, 4031994 - 4032094
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | ||||||||||  || || ||| ||||||||||||| |||   | ||| ||||||||||||||||||||| ||||||||| |||||    
T  4031994 attaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttccgataaaacttatttca 4032093  T
Q  859 a 859  Q
    |    
T  4032094 a 4032094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 741 - 837
Target Start/End: Complemental strand, 17751914 - 17751818
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacat 837  Q
    |||||||||||| || | | ||||||||||||||||||||||||||| |||||  |||||||| |||| ||||||| ||| |  | |||||||||||    
T  17751914 tttgtttattcttatgaaactaaatgcaaattacattcaattttttctctcttccattttctccataatcaatagccaatgagcactgtttttacat 17751818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 760 - 859
Target Start/End: Complemental strand, 16013583 - 16013484
Alignment:
Q  760 ttaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaa 859  Q
    ||||||| ||| | ||||||||||  || || ||| ||||||||||||| |||   | ||| ||||||||||||||||||||||||||||||| ||||||    
T  16013583 ttaaatgaaaaatgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaa 16013484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 3095952 - 3095907
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  3095952 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 3095907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 21542348 - 21542393
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  21542348 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 21542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 759 - 859
Target Start/End: Original strand, 4987950 - 4988050
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||||||||||| | ||||||||||  || |  ||| ||||||||||||| |||   | ||| |||||| |||||||||||||||||||||||| |||||    
T  4987950 attaaatgcaaaatgcattcaatttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttca 4988049  T
Q  859 a 859  Q
    |    
T  4988050 a 4988050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 876 - 918
Target Start/End: Original strand, 9428871 - 9428913
Alignment:
Q  876 tatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||||||| ||||||||||||||| |||||||||||||    
T  9428871 tatacttcaaattcttatgttttagttttattaataaatgtga 9428913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 791 - 852
Target Start/End: Complemental strand, 5881872 - 5881811
Alignment:
Q  791 cttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt 852  Q
    |||| |||||||||||||  |||| | ||||||||||||||||||||||| |||| ||||||    
T  5881872 ctttcattttctctataattaataaccaattaaaattgtttttacatctttctatgaaactt 5881811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 759 - 852
Target Start/End: Original strand, 21963962 - 21964055
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt 852  Q
    |||||||| ||||| ||| |||||| ||| || |||||||||||| || | ||||| | ||| |||||| |||||||||||| | |||||||||    
T  21963962 attaaatgtaaatttcatacaatttgttctcttttttattttctccatgatcaataaccaataaaaattatttttacatctttccataaaactt 21964055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 648 - 693
Target Start/End: Complemental strand, 35129286 - 35129241
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  35129286 cattttctttgtcccaaaatacaagcaaaaaagacaaacttttatc 35129241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 702
Target Start/End: Original strand, 1130433 - 1130489
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaat 702  Q
    |||||||||||||||||||  ||||||||||||  || |||||||||| ||||||||    
T  1130433 ctcattttctttgtcccaaattataagcaaaaaaaaccaacttttatcatatttaat 1130489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 822 - 852
Target Start/End: Complemental strand, 5300689 - 5300659
Alignment:
Q  822 aaaattgtttttacatcttcctataaaactt 852  Q
    |||||||||||||||||||||||||||||||    
T  5300689 aaaattgtttttacatcttcctataaaactt 5300659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 649 - 699
Target Start/End: Original strand, 30949051 - 30949101
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctattt 699  Q
    |||||||||||| ||| ||||||||||||| ||| ||||||||| ||||||    
T  30949051 attttctttgtctcaaaatataagcaaaaaagactaacttttatgctattt 30949101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 808
Target Start/End: Original strand, 374104 - 374153
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataa 808  Q
    |||||||||||||| |||||||||| ||| |  |||||||||||||||||    
T  374104 attaaatgcaaattgcattcaatttgttctcctttttattttctctataa 374153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 808
Target Start/End: Original strand, 17598298 - 17598347
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataa 808  Q
    |||||||||||||| |||||||||| ||| || |||||||||||| ||||    
T  17598298 attaaatgcaaattgcattcaatttattctcttttttattttctccataa 17598347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 91; Significance: 1e-43; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 647 - 918
Target Start/End: Original strand, 910 - 1180
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtt 746  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||        || ||||| ||||||      ||||||    
T  910 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgtttttttaaaaaatc-tctttcccaagaaaaacttttgtt 1008  T
Q  747 tattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctata 846  Q
    ||||||||||| |||||| |||||||||||| |||||| || |||||| ||||| || ||||||||||   ||| |||| |||||||||||||| |||||    
T  1009 tattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttctata 1108  T
Q  847 aaacttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||| || ||||          ||||||| ||||||||||| ||||||||||  ||||||||||||    
T  1109 aaacttttttaaaaaaaaacacaaaaaactatactccaaatttttatattttagtttttataataaatgtga 1180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 647 - 918
Target Start/End: Original strand, 8870 - 9140
Alignment:
Q  647 tcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgtt 746  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||        || ||||| ||||||      ||||||    
T  8870 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgtttttttaaaaaatc-tctttcccaagaaaaacttttgtt 8968  T
Q  747 tattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctata 846  Q
    ||||||||||| |||||| |||||||||||| |||||| || |||||| ||||| || ||||||||||   ||| |||| |||||||||||||| |||||    
T  8969 tattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttctata 9068  T
Q  847 aaacttttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    |||||||||| || ||||          ||||||| ||||||||||| ||||||||||  ||||||||||||    
T  9069 aaacttttttaaaaaaaaacacaaaaaactatactccaaatttttatattttagtttttataataaatgtga 9140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 84; Significance: 2e-39; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 722 - 918
Target Start/End: Original strand, 77930 - 78125
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||  |  ||||| ||||| || ||||||||| || |||     
T  77930 atctttttcaagattttt-tttgtttattctcataaaattaaatgtaaattacattcaattttcactttctttcattttttccataaccaatggccaatg 78028  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||       |||||||  ||||| ||||||||||||||||||||||| |||||    
T  78029 aaaattgtttttacatcttcctatacaacttttttcaaagaaaacac-aaaaaactatactctaaattcttatgttttagttttcttaataagtgtga 78125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 77887 - 77932
Alignment:
Q  648 cattttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  77887 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 83; Significance: 8e-39; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 722 - 867
Target Start/End: Original strand, 10018 - 10163
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    |||||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||| || |||||| ||||| || |||||||||||  |||     
T  10018 atcttttctaagattttt-tttgtttattctcatacaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatg 10116  T
Q  822 aaaattgtttttacatcttcctataaaacttttt-tcaagaaaacac 867  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||    
T  10117 aaaattgtttttacatcttcctataaaactttttctaaagaaaacac 10163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 80; Significance: 5e-37; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 722 - 914
Target Start/End: Original strand, 154834 - 155024
Alignment:
Q  722 atcttttccaagatttttctttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaatt 821  Q
    ||||||| |||||||||| ||| ||||||||||||| ||||||||||||||||||| |||||| ||  ||||| ||||| || |||||||||||| |||     
T  154834 atctttttcaagattttttttt-tttattctcataaaattaaatgcaaattacattaaattttctctatctttcattttttccataaccaatagccaatg 154932  T
Q  822 aaaattgtttttacatcttcctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaat 914  Q
     |||||||||||||||||| |||||||||||||||| ||||||| ||       ||||| |||| ||| |||||||||||||||||||||||||    
T  154933 taaattgtttttacatctttctataaaacttttttcaaagaaaatac--aaaaactatatttcagattcttatgttttagttttcttaataaat 155024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 74; Significance: 2e-33; HSPs: 2)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 742 - 855
Target Start/End: Complemental strand, 3597 - 3484
Alignment:
Q  742 ttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttc 841  Q
    |||||||||||||||  |||||||||||||||||||||||||| || |||||| ||||| || |||||||||||| ||| |||||| |||||||||||||    
T  3597 ttgtttattctcatacaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatcttc 3498  T
Q  842 ctataaaacttttt 855  Q
    ||||||||||||||    
T  3497 ctataaaacttttt 3484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 652 - 693
Target Start/End: Complemental strand, 3655 - 3614
Alignment:
Q  652 ttctttgtcccaagatataagcaaaaatgacaaacttttatc 693  Q
    ||||||||||||| ||||||||||||| || |||||||||||    
T  3655 ttctttgtcccaaaatataagcaaaaaagataaacttttatc 3614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 741 - 918
Target Start/End: Complemental strand, 44941 - 44764
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    ||||||||||||| ||| ||||||||||||||||||| ||||||  | |||||| ||||| || |||||||||||| ||| ||||||||||||  || ||    
T  44941 tttgtttattctcgtaaaattaaatgcaaattacatttaattttccctctctttcattttttccataaccaatagccaatgaaaattgttttttaatatt 44842  T
Q  841 cctataaaacttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    ||||||||||||||| | ||||||||||        |||||| |||||| |||||||||||||||||||||||||||||    
T  44841 cctataaaactttttccaaagaaaacacaaaaaaa-tatactccaaattattatgttttagttttcttaataaatgtga 44764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 70; Significance: 5e-31; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 649 - 912
Target Start/End: Original strand, 157694 - 157956
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgtttttnnnnnnnntcatcttttccaagatttttctttgttta 748  Q
    |||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||        ||||||||| ||  |      |||  |||    
T  157694 attttctttgtcccaaaatataagcaaaaaagacaaacttttattctatttaatcttgtttttaaaaata-tcatctttttcagtaaaaactttttctta 157792  T
Q  749 ttctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaa 848  Q
    ||||||| | ||||||||||||||||||| |||||| || |||||||||||| || ||||||||| || ||| |||||||||||||||||| || || ||    
T  157793 ttctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatctccccatgaa 157892  T
Q  849 acttttttc-aagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataa 912  Q
    |||| || | ||||||||||       |||| || |||||| ||||| |||||||||||||||||    
T  157893 acttattccaaagaaaacac-aaaaaactatgctacaaattcttatgctttagttttcttaataa 157956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 741 - 837
Target Start/End: Complemental strand, 52772 - 52676
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacat 837  Q
    |||| ||||| |||| | ||||||||| ||||||||| |||||| || ||||| ||||||||| |||| ||||||  ||| ||||||||||||||||    
T  52772 tttgcttattttcatgaaattaaatgcgaattacatttaattttctctctcttctattttctccataatcaatagtcaatgaaaattgtttttacat 52676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 745 - 849
Target Start/End: Original strand, 40174 - 40278
Alignment:
Q  745 tttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttccta 844  Q
    ||||||||||| | |||||||||||||||||||||| ||| || ||| |  ||||| ||||||||||||||| ||| ||||||||||||||| ||| |||    
T  40174 tttattctcatgaaattaaatgcaaattacattcaactttctctctcatccattttttctataaccaatagccaatgaaaattgtttttacaactttcta 40273  T
Q  845 taaaa 849  Q
    |||||    
T  40274 taaaa 40278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 741 - 918
Target Start/End: Complemental strand, 233657 - 233480
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    |||| |||||||||| | |||||||||||||||||||||||| |  | |||||  ||||||| | ||| | ||||| ||| |||| ||||||||||||||    
T  233657 tttgcttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaa-tgtttttacatctt 233559  T
Q  841 cctataaaactt-ttttcaagaaaacacnnnnnnnctatacttcaaatttttatgttttagttttcttaataaatgtga 918  Q
    || || |||||| |||| |||||||          |||||  | ||||| |||| ||||||||||||||||||||||||    
T  233558 cccatgaaacttattttaaagaaaaacacaaataactatatattaaattcttatattttagttttcttaataaatgtga 233480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 646 - 711
Target Start/End: Original strand, 762 - 827
Alignment:
Q  646 ctcattttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    |||||||||||| ||| || || |||| ||||||||| ||||| |||||||||||||||| |||||    
T  762 ctcattttctttatccaaaaatgtaagtaaaaatgaccaacttctatcctatttaatctttttttt 827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 34; Significance: 0.000000002; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 822 - 859
Target Start/End: Complemental strand, 5964 - 5927
Alignment:
Q  822 aaaattgtttttacatcttcctataaaacttttttcaa 859  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  5964 aaaattgtttttacatcttcctataaaacttatttcaa 5927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 649 - 711
Target Start/End: Complemental strand, 6114 - 6053
Alignment:
Q  649 attttctttgtcccaagatataagcaaaaatgacaaacttttatcctatttaatcttgttttt 711  Q
    ||||||||||||||||| ||||||||||||  || |||||||||| ||||||||  |||||||    
T  6114 attttctttgtcccaagttataagcaaaaa-aaccaacttttatcatatttaattatgttttt 6053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 759 - 859
Target Start/End: Original strand, 3177 - 3277
Alignment:
Q  759 attaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttca 858  Q
    |||| ||||||| | |||||||||| ||  || ||| ||||||||||||| |||   | |||  |||||||||||| ||||||||||||||||| |||||    
T  3177 attatatgcaaagtgcattcaatttgttttctttttcattttctctataatcaactaccaatggaaattgtttttagatcttcctataaaacttatttca 3276  T
Q  859 a 859  Q
    |    
T  3277 a 3277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 790 - 860
Target Start/End: Complemental strand, 161040 - 160970
Alignment:
Q  790 tcttttattttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaag 860  Q
    ||||| |||||||| ||||| |||| | ||| ||||||||||||||| ||| |||| |||||| |||||||    
T  161040 tctttcattttctcaataacaaataaccaatgaaaattgtttttacaactttctatcaaacttatttcaag 160970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 741 - 842
Target Start/End: Original strand, 160241 - 160342
Alignment:
Q  741 tttgtttattctcataatattaaatgcaaattacattcaattttttcactcttttattttctctataaccaatagctaattaaaattgtttttacatctt 840  Q
    |||| ||||||| || | |||||||  ||||||||||||||||| ||  ||||  |||||  | |||||||||||| ||| |||| || |||||||||||    
T  160241 tttgcttattcttatgaaattaaatataaattacattcaattttctctttcttccatttttcccataaccaatagccaatgaaaactggttttacatctt 160340  T
Q  841 cc 842  Q
    ||    
T  160341 cc 160342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University