View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1422R-Insertion-11 (Length: 362)
Name: NF1422R-Insertion-11
Description: NF1422R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1422R-Insertion-11 |
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Alignment Details
Target: chr8 (Bit Score: 348; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 8 - 355
Target Start/End: Complemental strand, 22269709 - 22269362
Alignment:
| Q |
8 |
agtccggtggtttcggcatctactattgctgacattataaagtctcgaaccgaagcacttttgaagataaccaaaacagcagtttctcctaagccaattg |
107 |
Q |
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| T |
22269709 |
agtccggtggtttcggcatctactattgctgacattataaagtctcgaaccgaagcacttttgaagataaccaaaacagcagtttctcctaagccaattg |
22269610 |
T |
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| Q |
108 |
tgctcaaagctgaatacgcacactgtccaaatcttaccattattgacacaccggggtttgttctcaaggtatttgttgtaatgcttgaatgataagtgat |
207 |
Q |
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| T |
22269609 |
tgctcaaagctgaatacgcacactgtccaaatcttaccattattgacacaccggggtttgttctcaaggtatttgttgtaatgcttgaatgataagtgat |
22269510 |
T |
|
| Q |
208 |
tcgactgatggtatgtttaattggaaatttgtgtgagatctgattgttttgtatggtaggcgaagaagggtgaaccggagaacacgcctgatgagattct |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22269509 |
tcgactgatggtatgtttaattggaaatttgtgtgagatctgattgttttgtatggtaggcgaagaagggtgaaccggagaacacgcctgatgagattct |
22269410 |
T |
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| Q |
308 |
ttccatggtgaagacattggctactcctccacaccgtatactcttgtt |
355 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22269409 |
ttccatggtgaagacattggctactcctccacaccgtatactcttgtt |
22269362 |
T |
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