View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1422_high_21 (Length: 318)
Name: NF1422_high_21
Description: NF1422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1422_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 41330345 - 41330047
Alignment:
| Q |
1 |
aatgacgagcactacgtggtgtttatcaatcaggcactaaagtggaaaagtggggatatatctccactcataagagaagttctatgtatggttcatatat |
100 |
Q |
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| T |
41330345 |
aatgacgagcactacgtggtgtttatcaatcaggtactaaagtggaaaagtggggatatatctccactcataagagaagttctatgtatggttcatatat |
41330246 |
T |
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| Q |
101 |
ctccacttatgtgagcttgaggcctacaacaaattgatcttcatagtctttggctgttgactcctgtcacgtctctttaaacagggttaatgattgttaa |
200 |
Q |
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| T |
41330245 |
ctccacttatgtgagcttgaggcctacaacaaattgatcttcgtagtctttggctgttgactcctgtcacgtctctttaaacagggttaatgattgttaa |
41330146 |
T |
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| Q |
201 |
ggggtggaaaaagggtccaacctgttgggacagttcgtttagtccgttattttttatggactgagctgaagttttaaactcgtctttttcagttggtcc |
299 |
Q |
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| T |
41330145 |
gggttggaaaaagggtccaacctgttgggacagttcgtttagtccgttattttttacggactgagttgaagttttgaactcgtctctttcaattggtcc |
41330047 |
T |
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