View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1422_low_35 (Length: 266)
Name: NF1422_low_35
Description: NF1422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1422_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 45684772 - 45685027
Alignment:
| Q |
1 |
ccaccagcatatgcctcaactacagtcatctacaattccaagatataagccactgtcacatcctgataattcaaggattctaaataaataaaagaaagaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
45684772 |
ccaccagcatatgcctcaactacagtcatctacaattccaagatataagccactgtcacgtcctgataattcaaggattctaaataaataaaagaaagaa |
45684871 |
T |
|
| Q |
101 |
tgcatacagcaaggaccatggagtttggcagaataaacaaatagcttgtaagcctattagatatattaagcatgtaacaaaattatggacattgttaact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45684872 |
tgcatacagcaaggaccatggagtttggcagaataaacaaatagcttgtaagcctattagatatattaagcatgtaacaaaattatggacattgttaact |
45684971 |
T |
|
| Q |
201 |
agtttgtagctcattaggcattgggtgagtttcaatctttttctcttatacctatg |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45684972 |
agtttgtagctcattaggcattgggtgagtttcaatctttttctcttatacctatg |
45685027 |
T |
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