View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1422_low_38 (Length: 260)

Name: NF1422_low_38
Description: NF1422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1422_low_38
NF1422_low_38
[»] chr3 (40 HSPs)
chr3 (1-215)||(29112261-29112475)
chr3 (1-133)||(33313345-33313469)
chr3 (107-183)||(23870572-23870648)
chr3 (123-185)||(11493372-11493434)
chr3 (123-183)||(8383243-8383303)
chr3 (140-187)||(29508447-29508494)
chr3 (138-187)||(8039844-8039893)
chr3 (137-186)||(12704007-12704056)
chr3 (138-183)||(17005632-17005677)
chr3 (123-187)||(15544679-15544743)
chr3 (123-178)||(2620071-2620126)
chr3 (137-187)||(7928450-7928500)
chr3 (123-181)||(14216878-14216936)
chr3 (123-181)||(14223007-14223065)
chr3 (107-184)||(18426919-18426996)
chr3 (122-187)||(26290356-26290421)
chr3 (130-183)||(34307793-34307846)
chr3 (117-181)||(26508090-26508154)
chr3 (123-187)||(49505163-49505227)
chr3 (137-184)||(10690274-10690321)
chr3 (124-179)||(10954939-10954994)
chr3 (144-187)||(11313809-11313852)
chr3 (144-182)||(11251985-11252023)
chr3 (125-187)||(14618769-14618831)
chr3 (145-187)||(16192759-16192801)
chr3 (122-196)||(22774070-22774144)
chr3 (145-187)||(25093510-25093552)
chr3 (145-187)||(32804549-32804591)
chr3 (140-186)||(48353741-48353787)
chr3 (124-181)||(4987306-4987363)
chr3 (150-187)||(8789559-8789596)
chr3 (144-185)||(9624648-9624689)
chr3 (138-183)||(14840304-14840349)
chr3 (137-182)||(24633766-24633811)
chr3 (150-186)||(1438817-1438853)
chr3 (124-180)||(9800027-9800083)
chr3 (145-181)||(15796309-15796345)
chr3 (124-196)||(20691306-20691378)
chr3 (122-182)||(25064894-25064954)
chr3 (137-181)||(34910317-34910361)
[»] chr5 (41 HSPs)
chr5 (107-187)||(39205850-39205930)
chr5 (107-181)||(39698511-39698585)
chr5 (122-187)||(27144448-27144513)
chr5 (123-187)||(3966489-3966553)
chr5 (144-187)||(6471898-6471941)
chr5 (128-187)||(32630744-32630803)
chr5 (144-187)||(41091266-41091309)
chr5 (122-184)||(6035468-6035529)
chr5 (138-187)||(12264838-12264887)
chr5 (150-195)||(18421842-18421887)
chr5 (150-187)||(24273039-24273076)
chr5 (150-187)||(24389138-24389175)
chr5 (138-187)||(30502397-30502446)
chr5 (138-187)||(30542740-30542789)
chr5 (150-187)||(34879363-34879400)
chr5 (140-185)||(35017040-35017085)
chr5 (144-184)||(12927661-12927701)
chr5 (123-187)||(15410457-15410521)
chr5 (120-183)||(5467991-5468054)
chr5 (123-182)||(6770529-6770588)
chr5 (144-187)||(23012417-23012460)
chr5 (128-183)||(28588687-28588742)
chr5 (140-187)||(33035810-33035857)
chr5 (150-184)||(10022645-10022679)
chr5 (126-184)||(22423824-22423882)
chr5 (145-183)||(23016002-23016040)
chr5 (145-183)||(25863212-25863250)
chr5 (152-186)||(31682048-31682082)
chr5 (107-181)||(42893330-42893404)
chr5 (124-181)||(6247609-6247666)
chr5 (136-181)||(15405070-15405115)
chr5 (135-184)||(17593734-17593783)
chr5 (123-180)||(19438329-19438386)
chr5 (138-187)||(36838544-36838593)
chr5 (123-187)||(9449455-9449519)
chr5 (123-187)||(11685925-11685989)
chr5 (120-180)||(16304440-16304500)
chr5 (150-186)||(26312782-26312818)
chr5 (137-181)||(27932235-27932279)
chr5 (123-183)||(30098312-30098372)
chr5 (155-187)||(39758290-39758322)
[»] chr4 (34 HSPs)
chr4 (107-187)||(56488519-56488599)
chr4 (123-187)||(36635310-36635374)
chr4 (123-185)||(40179647-40179709)
chr4 (123-190)||(22440606-22440673)
chr4 (107-181)||(4383338-4383411)
chr4 (123-187)||(13783267-13783331)
chr4 (120-184)||(21539879-21539943)
chr4 (137-196)||(5775358-5775417)
chr4 (151-186)||(8402752-8402787)
chr4 (128-187)||(40613441-40613500)
chr4 (137-187)||(3712518-3712568)
chr4 (137-183)||(8423731-8423777)
chr4 (138-184)||(30522927-30522973)
chr4 (137-187)||(40742591-40742641)
chr4 (144-182)||(56257940-56257978)
chr4 (145-186)||(903930-903971)
chr4 (153-186)||(7970535-7970568)
chr4 (123-187)||(35723393-35723458)
chr4 (123-187)||(15029751-15029815)
chr4 (123-179)||(37496690-37496746)
chr4 (144-184)||(37698719-37698759)
chr4 (144-187)||(999357-999400)
chr4 (138-185)||(7214533-7214580)
chr4 (136-183)||(54580036-54580083)
chr4 (144-186)||(35952627-35952669)
chr4 (128-186)||(49652982-49653040)
chr4 (150-187)||(16189722-16189759)
chr4 (150-187)||(18576046-18576083)
chr4 (107-187)||(22234899-22234980)
chr4 (129-178)||(24613719-24613768)
chr4 (123-179)||(680005-680061)
chr4 (150-186)||(9996853-9996889)
chr4 (123-187)||(26504308-26504372)
chr4 (139-183)||(30982891-30982935)
[»] chr2 (37 HSPs)
chr2 (123-181)||(12940950-12941008)
chr2 (123-187)||(20242736-20242800)
chr2 (123-187)||(21616748-21616812)
chr2 (123-187)||(23718012-23718076)
chr2 (123-187)||(24105684-24105748)
chr2 (123-187)||(29970558-29970622)
chr2 (126-181)||(4882711-4882766)
chr2 (144-187)||(34691814-34691857)
chr2 (144-187)||(34714226-34714269)
chr2 (136-187)||(44860319-44860370)
chr2 (123-189)||(16069261-16069327)
chr2 (123-181)||(20539689-20539747)
chr2 (124-182)||(21782832-21782890)
chr2 (145-187)||(30527604-30527646)
chr2 (137-187)||(37411253-37411303)
chr2 (138-187)||(2665897-2665946)
chr2 (142-187)||(5367197-5367242)
chr2 (137-186)||(28677909-28677958)
chr2 (122-183)||(36756357-36756418)
chr2 (137-185)||(24975336-24975384)
chr2 (139-183)||(25846743-25846787)
chr2 (123-187)||(31808063-31808127)
chr2 (123-187)||(34784991-34785055)
chr2 (148-196)||(38355887-38355935)
chr2 (120-171)||(11670738-11670789)
chr2 (137-196)||(18276521-18276580)
chr2 (145-180)||(22084848-22084883)
chr2 (152-187)||(35056883-35056918)
chr2 (151-189)||(15909639-15909677)
chr2 (123-181)||(18841028-18841086)
chr2 (107-177)||(27084232-27084302)
chr2 (145-187)||(35449521-35449563)
chr2 (153-187)||(39279691-39279725)
chr2 (123-181)||(39323250-39323308)
chr2 (137-182)||(1327978-1328023)
chr2 (138-182)||(2331795-2331839)
chr2 (123-195)||(30404851-30404923)
[»] chr1 (58 HSPs)
chr1 (113-183)||(36878437-36878507)
chr1 (122-187)||(7918220-7918285)
chr1 (124-187)||(10572598-10572661)
chr1 (107-181)||(1815227-1815301)
chr1 (137-187)||(25361886-25361936)
chr1 (123-181)||(28273103-28273161)
chr1 (137-183)||(34298436-34298482)
chr1 (137-187)||(38503320-38503370)
chr1 (138-187)||(10233254-10233303)
chr1 (122-187)||(13997868-13997933)
chr1 (123-183)||(398778-398838)
chr1 (123-187)||(6427336-6427400)
chr1 (138-186)||(14332652-14332700)
chr1 (123-187)||(17831540-17831604)
chr1 (118-184)||(48148049-48148116)
chr1 (145-187)||(1864889-1864931)
chr1 (123-177)||(2896140-2896194)
chr1 (137-187)||(9828044-9828094)
chr1 (144-190)||(12443466-12443512)
chr1 (122-184)||(16927197-16927259)
chr1 (125-187)||(19324550-19324612)
chr1 (125-187)||(20157359-20157421)
chr1 (123-181)||(24577201-24577259)
chr1 (137-187)||(25098564-25098614)
chr1 (144-186)||(40181878-40181920)
chr1 (126-183)||(1486722-1486779)
chr1 (123-196)||(6415001-6415074)
chr1 (150-187)||(44482243-44482280)
chr1 (122-186)||(8842724-8842788)
chr1 (123-182)||(9033021-9033081)
chr1 (123-183)||(9629913-9629973)
chr1 (122-185)||(5898277-5898340)
chr1 (124-187)||(19562630-19562693)
chr1 (152-187)||(34371728-34371763)
chr1 (128-187)||(39130776-39130835)
chr1 (144-187)||(49872844-49872887)
chr1 (122-195)||(9690275-9690346)
chr1 (123-181)||(22881631-22881689)
chr1 (123-185)||(41500717-41500779)
chr1 (123-185)||(41510895-41510957)
chr1 (123-181)||(42359464-42359522)
chr1 (123-181)||(46348398-46348456)
chr1 (157-187)||(52903269-52903299)
chr1 (138-187)||(9709821-9709870)
chr1 (141-186)||(12707883-12707928)
chr1 (141-186)||(12713337-12713382)
chr1 (141-186)||(12717428-12717473)
chr1 (144-181)||(31015050-31015087)
chr1 (138-187)||(36905998-36906047)
chr1 (124-181)||(38078676-38078733)
chr1 (124-172)||(609482-609530)
chr1 (107-187)||(11605944-11606024)
chr1 (150-186)||(27966008-27966044)
chr1 (155-187)||(30749858-30749890)
chr1 (155-187)||(30771309-30771341)
chr1 (109-181)||(32461478-32461550)
chr1 (143-187)||(35999331-35999375)
chr1 (123-183)||(37598818-37598877)
[»] chr8 (34 HSPs)
chr8 (123-187)||(34897071-34897135)
chr8 (123-187)||(4786347-4786411)
chr8 (123-191)||(39954284-39954352)
chr8 (122-196)||(20679395-20679469)
chr8 (123-184)||(14134685-14134746)
chr8 (122-187)||(24362211-24362276)
chr8 (144-196)||(12606829-12606881)
chr8 (137-184)||(7658463-7658510)
chr8 (117-184)||(12570746-12570813)
chr8 (117-187)||(12570517-12570587)
chr8 (137-186)||(4611534-4611583)
chr8 (110-183)||(15816142-15816215)
chr8 (124-184)||(13203628-13203688)
chr8 (123-187)||(13844605-13844669)
chr8 (123-187)||(18964163-18964227)
chr8 (123-187)||(36934656-36934720)
chr8 (144-183)||(3025558-3025597)
chr8 (123-170)||(11815815-11815862)
chr8 (144-187)||(14731719-14731762)
chr8 (122-181)||(24669418-24669477)
chr8 (144-187)||(31236586-31236629)
chr8 (145-187)||(11803267-11803309)
chr8 (145-187)||(11927095-11927137)
chr8 (144-186)||(12559116-12559158)
chr8 (123-181)||(36450769-36450827)
chr8 (131-184)||(14634153-14634206)
chr8 (137-182)||(24017452-24017497)
chr8 (150-187)||(26418351-26418388)
chr8 (129-178)||(29447128-29447177)
chr8 (129-186)||(34201056-34201113)
chr8 (107-167)||(12124078-12124138)
chr8 (136-176)||(18067954-18067994)
chr8 (155-187)||(26902184-26902216)
chr8 (123-187)||(31109527-31109591)
[»] chr7 (44 HSPs)
chr7 (123-187)||(22868028-22868092)
chr7 (122-187)||(3520351-3520416)
chr7 (122-187)||(6630921-6630986)
chr7 (123-187)||(32308106-32308170)
chr7 (123-187)||(42720899-42720963)
chr7 (121-196)||(5835231-5835306)
chr7 (122-184)||(5235971-5236033)
chr7 (129-183)||(21140995-21141049)
chr7 (125-187)||(22602719-22602781)
chr7 (129-187)||(23128670-23128728)
chr7 (123-181)||(27945027-27945085)
chr7 (107-187)||(2948653-2948733)
chr7 (123-187)||(26733290-26733354)
chr7 (108-187)||(9482905-9482984)
chr7 (124-187)||(20549778-20549841)
chr7 (137-187)||(5548676-5548726)
chr7 (130-187)||(2034434-2034491)
chr7 (122-187)||(15902807-15902872)
chr7 (122-195)||(26329383-26329456)
chr7 (137-182)||(29787383-29787428)
chr7 (123-183)||(1401011-1401071)
chr7 (124-187)||(4909138-4909201)
chr7 (136-187)||(7758321-7758372)
chr7 (144-187)||(17851438-17851481)
chr7 (129-184)||(18569069-18569124)
chr7 (123-186)||(23191882-23191945)
chr7 (144-182)||(2424621-2424659)
chr7 (145-187)||(8239059-8239101)
chr7 (155-185)||(10377525-10377555)
chr7 (143-181)||(13300416-13300454)
chr7 (107-182)||(14729667-14729746)
chr7 (145-187)||(16341504-16341546)
chr7 (137-187)||(19206050-19206100)
chr7 (122-196)||(22484010-22484084)
chr7 (119-185)||(41020478-41020544)
chr7 (145-182)||(11890933-11890970)
chr7 (150-187)||(17307906-17307943)
chr7 (122-187)||(25791638-25791702)
chr7 (130-187)||(27732248-27732305)
chr7 (137-181)||(11831432-11831476)
chr7 (123-187)||(18013083-18013147)
chr7 (137-185)||(27093424-27093472)
chr7 (137-185)||(27184829-27184877)
chr7 (123-179)||(30516374-30516430)
[»] scaffold0004 (1 HSPs)
scaffold0004 (107-181)||(92777-92851)
[»] chr6 (52 HSPs)
chr6 (124-186)||(13360382-13360444)
chr6 (126-187)||(19040341-19040402)
chr6 (123-187)||(7265602-7265666)
chr6 (123-187)||(13851722-13851786)
chr6 (123-186)||(7723260-7723323)
chr6 (123-185)||(7996389-7996451)
chr6 (123-185)||(8022350-8022412)
chr6 (123-184)||(9658865-9658926)
chr6 (123-196)||(19044450-19044523)
chr6 (123-187)||(9027164-9027228)
chr6 (144-187)||(9025503-9025546)
chr6 (122-187)||(7086780-7086845)
chr6 (138-183)||(8389485-8389530)
chr6 (150-187)||(11591879-11591916)
chr6 (150-187)||(13364714-13364751)
chr6 (150-187)||(26562702-26562739)
chr6 (138-187)||(30866153-30866202)
chr6 (123-183)||(3398605-3398664)
chr6 (123-187)||(5732519-5732583)
chr6 (123-183)||(7938102-7938162)
chr6 (122-194)||(25096408-25096480)
chr6 (128-187)||(9629374-9629433)
chr6 (122-181)||(16833293-16833352)
chr6 (144-187)||(21924944-21924987)
chr6 (144-187)||(24832595-24832638)
chr6 (126-181)||(25038086-25038141)
chr6 (136-183)||(32511679-32511726)
chr6 (124-187)||(1532225-1532290)
chr6 (137-187)||(7377979-7378029)
chr6 (123-181)||(8776988-8777046)
chr6 (145-187)||(9617442-9617484)
chr6 (123-181)||(10770689-10770747)
chr6 (123-181)||(16766683-16766741)
chr6 (125-183)||(17341677-17341735)
chr6 (145-187)||(21142126-21142168)
chr6 (123-181)||(34595120-34595178)
chr6 (138-187)||(7151413-7151462)
chr6 (150-187)||(17411877-17411914)
chr6 (122-187)||(20518330-20518395)
chr6 (145-182)||(31579239-31579276)
chr6 (144-185)||(34073358-34073399)
chr6 (136-184)||(5462685-5462733)
chr6 (123-187)||(5626705-5626769)
chr6 (139-187)||(7248360-7248408)
chr6 (122-182)||(8805586-8805646)
chr6 (124-187)||(10339134-10339198)
chr6 (124-184)||(15443682-15443742)
chr6 (123-187)||(17302333-17302397)
chr6 (123-191)||(17841594-17841662)
chr6 (123-187)||(20371119-20371183)
chr6 (118-170)||(26575357-26575409)
chr6 (123-187)||(33419159-33419223)
[»] scaffold0022 (1 HSPs)
scaffold0022 (138-184)||(90844-90890)
[»] scaffold0085 (1 HSPs)
scaffold0085 (122-187)||(26378-26443)
[»] scaffold0123 (1 HSPs)
scaffold0123 (136-187)||(44534-44585)
[»] scaffold0306 (1 HSPs)
scaffold0306 (123-181)||(13386-13444)
[»] scaffold0152 (1 HSPs)
scaffold0152 (123-181)||(21883-21941)
[»] scaffold0036 (1 HSPs)
scaffold0036 (141-187)||(9756-9802)
[»] scaffold0361 (1 HSPs)
scaffold0361 (107-181)||(14499-14574)
[»] scaffold0020 (1 HSPs)
scaffold0020 (144-187)||(135321-135364)
[»] scaffold0018 (1 HSPs)
scaffold0018 (123-181)||(178833-178892)
[»] scaffold0103 (1 HSPs)
scaffold0103 (123-181)||(51797-51855)
[»] scaffold0227 (1 HSPs)
scaffold0227 (107-183)||(7324-7401)
[»] scaffold0044 (1 HSPs)
scaffold0044 (150-183)||(53193-53226)
[»] scaffold0011 (1 HSPs)
scaffold0011 (123-196)||(240021-240094)
[»] scaffold0122 (1 HSPs)
scaffold0122 (137-181)||(8010-8054)
[»] scaffold0116 (1 HSPs)
scaffold0116 (123-187)||(9884-9948)
[»] scaffold0039 (1 HSPs)
scaffold0039 (124-184)||(84985-85045)
[»] scaffold0008 (1 HSPs)
scaffold0008 (123-183)||(263385-263445)


Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 29112475 - 29112261
Alignment:
Q  1 taatgtaaattctttgtatttacataagatatcatcaattctttcatgatgggggttgatgtaaagtactaaaggtagtatcatattaagccatgactca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29112475 taatgtaaattctttgtatttacataagatatcatcaattctttcatgatgggggttgatgtaaagtactaaaggtagtatcatattaagccatgactca 29112376  T
Q  101 gtcaccatgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtcactat 200  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29112375 gtcaccatgaagcacggatacggacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatatgacggcgtcactat 29112276  T
Q  201 ataaaaggcaacctt 215  Q
    |||||||||||||||    
T  29112275 ataaaaggcaacctt 29112261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 33313345 - 33313469
Alignment:
Q  1 taatgtaaattctttgtatttacataagatatcatcaattctttcatgatgggggttgatgtaaagtactaaaggtagtatcatattaagccatgactca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||   ||||||||||||||||||||||||||||||     
T  33313345 taatgtaaattctttgtatttacataagatatcatcaattctttcatca-cggggttgatgtaaag---taaaggtagtatcatattaagccatgactcc 33313440  T
Q  101 gtcaccatgaagcacggatatagacactgacac 133  Q
    ||    ||||||||||||||| ||||| |||||    
T  33313441 gt----atgaagcacggatatggacacggacac 33313469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 23870648 - 23870572
Alignment:
Q  107 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    ||||||||||||||  ||||| ||||||| |||||| ||||| |||||| |||||||||||||||||||| ||||||    
T  23870648 atgaagcacggatacggacacggacacgtcgacaccgctaataatttgaaaaaatcatataattcagtgtgattata 23870572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 11493434 - 11493372
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatg 185  Q
    |||| |||||||| |||||||||||| || ||||||||||| |||||||||||||||||||||    
T  11493434 gacattgacacgtcgacaccactaataatgtgagaaaatcacataattcagtgtaattatatg 11493372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 8383243 - 8383303
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    |||| |||||||  |||||| ||||| ||||||||||||||||||||||||||||||||||    
T  8383243 gacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattata 8383303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 29508447 - 29508494
Alignment:
Q  140 accactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  29508447 accactaataatttgaaaaaatcatataattcagtgtaattatatgtg 29508494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 8039893 - 8039844
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  8039893 acaccgctaataatttgagaaaattatataattcagtgtaattatatgtg 8039844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 12704007 - 12704056
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgt 186  Q
    |||||||||||| ||||||||||| || ||||||||||||||||||||||    
T  12704007 gacaccactaataatttgagaaaagcacataattcagtgtaattatatgt 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 17005677 - 17005632
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||    
T  17005677 acaccactaataatttgataaaatcatataattcagtgtaattata 17005632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 15544679 - 15544743
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||||||||| ||||| |||||| ||||||| ||||||| || ||||||| ||||    
T  15544679 gacactgacacgttgacaccgctaataatttgataaaatcacataattctgtataattatgtgtg 15544743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 2620126 - 2620071
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaa 178  Q
    ||||||||||||  |||||||||||| |||||||||||||| |||||| |||||||    
T  2620126 gacactgacacgccgacaccactaatcatttgagaaaatcacataattaagtgtaa 2620071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 7928450 - 7928500
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||| ||||| |||||| ||||||| |||||||||||||||||||||||    
T  7928450 gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtg 7928500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 14216878 - 14216936
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||| ||||| |||||| |||| | || ||||||||||||||||||||||    
T  14216878 gacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaatta 14216936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 14223007 - 14223065
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||| ||||| |||||| |||| | || ||||||||||||||||||||||    
T  14223007 gacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaatta 14223065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 18426919 - 18426996
Alignment:
Q  107 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    ||||||||| ||||  ||||| ||||||  |||||||||||| |||| | ||||||| ||||||| ||||||||||||    
T  18426919 atgaagcacagatacggacacggacacgccgacaccactaataatttcaaaaaatcacataattcggtgtaattatat 18426996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 26290356 - 26290421
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||  ||||||| |||| |||||||||||||| ||| ||| || ||||||||||||    
T  26290356 agacactgacacgccgacaccattaataatttgagaaaatcacatagttcggtttaattatatgtg 26290421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 34307846 - 34307793
Alignment:
Q  130 acacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    ||||| ||||||| ||||| |||||||||||||| ||| |||||||||||||||    
T  34307846 acacgctgacaccgctaataatttgagaaaatcacatatttcagtgtaattata 34307793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 26508090 - 26508154
Alignment:
Q  117 gatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    |||| ||| ||||||||| ||||||  ||||| |||||| ||||||| |||||||||||||||||    
T  26508090 gatacagatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatta 26508154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 49505227 - 49505163
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||||  || ||| ||||| |||||||||||||| |||||| ||||||||||||||||    
T  49505227 gacaccgacacgcagagaccgctaataatttgagaaaatcacataatttagtgtaattatatgtg 49505163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 10690321 - 10690274
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    |||||| ||||| || ||||||||||| ||||||||||||||||||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaattatat 10690274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 10954939 - 10954994
Alignment:
Q  124 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaat 179  Q
    |||||||||||  ||||| |||||| |||||| ||||||| |||||||||||||||    
T  10954939 acactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaat 10954994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 11313852 - 11313809
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||    
T  11313852 ctaataatttgagaaaatcacataatttagtgtaattatatgtg 11313809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 11251985 - 11252023
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattat 182  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  11251985 ctaataatttgagaaaatcacataattcagtgtaattat 11252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 14618769 - 14618831
Alignment:
Q  125 cactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||| ||| ||||||| ||||| |||| |||||| || ||||||||||||||| |||||||    
T  14618769 cactgagacgctgacacccctaataatttaagaaaaccacataattcagtgtaataatatgtg 14618831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 16192801 - 16192759
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||| |||||||||||| | |||||||||||||||||||||||    
T  16192801 taataatttgagaaaataacataattcagtgtaattatatgtg 16192759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 22774144 - 22774070
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 196  Q
    |||||| ||||||| |||||||||||| ||| || ||| ||| ||| ||||||||||||||| ||| ||| ||||    
T  22774144 agacacagacacgtcgacaccactaataattagacaaagtcacatatttcagtgtaattataagtgtcggtgtca 22774070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 25093510 - 25093552
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||| |||||||||||||| | |||||||||||||||||||||    
T  25093510 taatgatttgagaaaatcacacaattcagtgtaattatatgtg 25093552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 32804591 - 32804549
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||| |||||||||||||| |||||| ||||||||||||||||    
T  32804591 taataatttgagaaaatcacataatttagtgtaattatatgtg 32804549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 48353787 - 48353741
Alignment:
Q  140 accactaattatttgagaaaatcatataattcagtgtaattatatgt 186  Q
    ||||||||| |||||||||||||| |||||| | |||||||||||||    
T  48353787 accactaataatttgagaaaatcaaataattaattgtaattatatgt 48353741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 4987363 - 4987306
Alignment:
Q  124 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    |||||||||||  |||||  ||||| |||||| ||||||| |||||||||||||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 4987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 8789596 - 8789559
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  8789596 atttgagaaaatcacataattccgtgtaattatatgtg 8789559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 9624648 - 9624689
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatg 185  Q
    ||||| |||||||||||||| |||||||| ||||||||||||    
T  9624648 ctaataatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 14840349 - 14840304
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    |||||| |||| |||| ||||||||| |||||||||||||||||||    
T  14840349 acaccattaataatttcagaaaatcacataattcagtgtaattata 14840304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 24633766 - 24633811
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattat 182  Q
    |||||||||||| |||||||||||||| ||||||| ||| ||||||    
T  24633766 gacaccactaataatttgagaaaatcacataattcggtgcaattat 24633811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 1438817 - 1438853
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatatgt 186  Q
    |||||||||||||| |||||||||| |||||||||||    
T  1438817 atttgagaaaatcacataattcagtataattatatgt 1438853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 9800027 - 9800083
Alignment:
Q  124 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatt 180  Q
    |||||||||||  |||||| ||||| |||||||||||| | ||||||| ||||||||    
T  9800027 acactgacacgccgacacctctaataatttgagaaaattacataattccgtgtaatt 9800083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 15796345 - 15796309
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaatta 181  Q
    |||| |||||| |||||||||||||||||||||||||    
T  15796345 taataatttgaaaaaatcatataattcagtgtaatta 15796309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 20691306 - 20691378
Alignment:
Q  124 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 196  Q
    |||||||||||| || ||   |||| |||||||||||| | ||||||||||||||| ||||||| ||| ||||    
T  20691306 acactgacacgtagaaactgataataatttgagaaaatgacataattcagtgtaatcatatgtgtcggtgtca 20691378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 25064894 - 25064954
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattat 182  Q
    ||||| |||||||  |||||| ||||| |||||| ||||||| |||||| |||||||||||    
T  25064894 agacattgacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaattat 25064954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 34910317 - 34910361
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||| |||||| |||||| ||||||| |||||||||||||||||    
T  34910317 gacacaactaataatttgaaaaaatcacataattcagtgtaatta 34910361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 187
Target Start/End: Original strand, 39205850 - 39205930
Alignment:
Q  107 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||| |||||| ||||||| |||||  ||||| |||||||||||||||||||||  |||||||||||||||    
T  39205850 atgaagcacggatacagacacggacacgtcgacactgctaataatttgagaaaatcatataattaggtgtaattatatgtg 39205930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 39698511 - 39698585
Alignment:
Q  107 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||||  |||||||||||| ||||||  ||||| |||||| ||||||| |||||||||||||||||    
T  39698511 atgaagcacggatacggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatta 39698585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 27144448 - 27144513
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||  |||||| ||||| ||||||| |||||| |||||| ||||||||||||||||    
T  27144448 agacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtg 27144513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 3966489 - 3966553
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||| |  |||||| ||||| |||||||||||||| | |||||||||||||||||||||    
T  3966489 gacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtg 3966553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 6471941 - 6471898
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  6471941 ctaataatttgagaaaatcacataattcagtgtaattatatgtg 6471898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 32630803 - 32630744
Alignment:
Q  128 tgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||| |||||||  |||| |||||||||||| |||||||||| ||||||||||||||    
T  32630803 tgacacgctgacaccgataataatttgagaaaattatataattcaatgtaattatatgtg 32630744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 41091309 - 41091266
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  41091309 ctaatgatttgagaaaatcacataattcagtgtaattatatgtg 41091266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 6035468 - 6035529
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    |||||||||||||  |||||| ||||| |||||||||| | ||||||||||||||||||||||    
T  6035468 agacactgacacgccgacaccgctaataatttgagaaa-taatataattcagtgtaattatat 6035529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 12264887 - 12264838
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| |||||||||||||||||| | || ||||||||||||||||||||    
T  12264887 acaccgctaattatttgagaaaattacatgattcagtgtaattatatgtg 12264838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 18421887 - 18421842
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatatgtgacggcgtc 195  Q
    |||||||||||||| ||||| ||||||||||||||||| |||||||    
T  18421887 atttgagaaaatcacataatccagtgtaattatatgtgtcggcgtc 18421842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 24273076 - 24273039
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||| |||||||||||||||||||||||    
T  24273076 atttgagaaaatcacataattcagtgtaattatatgtg 24273039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 24389138 - 24389175
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||| |||||||||||||||||||||||    
T  24389138 atttgagaaaatcacataattcagtgtaattatatgtg 24389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 30502446 - 30502397
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||| ||||||||||||||  ||||||||||||||||||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtg 30502397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 30542789 - 30542740
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||| ||||||||||||||  ||||||||||||||||||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtg 30542740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 34879363 - 34879400
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||||||||||||||||||| |||||||    
T  34879363 atttgagaaaatcatataattcagtgtaataatatgtg 34879400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 35017040 - 35017085
Alignment:
Q  140 accactaattatttgagaaaatcatataattcagtgtaattatatg 185  Q
    ||||||||| |||||||||||||| |||||| ||||||||||||||    
T  35017040 accactaataatttgagaaaatcacataatttagtgtaattatatg 35017085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 12927661 - 12927701
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  12927661 ctaataatttgagaaaatcatataatttagtgtaattatat 12927701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 15410521 - 15410457
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||  |||||| ||||| |||| ||||||| |||| |||||||||||| |||||||    
T  15410521 gacactgacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaatcatatgtg 15410457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 5468054 - 5467991
Alignment:
Q  120 atagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    ||||||||||||||||  | |||  |||| |||||| ||||||| |||||||||||||||||||    
T  5468054 atagacactgacacgtcaataccgataataatttgataaaatcacataattcagtgtaattata 5467991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 6770529 - 6770588
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattat 182  Q
    |||||||||||  |||||| |||||| |||| ||||||||| ||||||||||||| ||||    
T  6770529 gacactgacacactgacacaactaataatttaagaaaatcacataattcagtgtacttat 6770588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 23012460 - 23012417
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||||||||||||||||||| | ||||||||||||||    
T  23012460 ctaataatttgagaaaatcatataatttaatgtaattatatgtg 23012417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 28588742 - 28588687
Alignment:
Q  128 tgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    |||||||  ||||||  |||| |||||||||||||| |||||||||||||||||||    
T  28588742 tgacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattata 28588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 187
Target Start/End: Complemental strand, 33035857 - 33035810
Alignment:
Q  140 accactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||| |||| ||||||  ||||||||||||||||||||||||||||||    
T  33035857 accattaataatttgaataaatcatataattcagtgtaattatatgtg 33035810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 10022645 - 10022679
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatat 184  Q
    |||||| ||||||||||||||||||||||||||||    
T  10022645 atttgataaaatcatataattcagtgtaattatat 10022679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 22423882 - 22423824
Alignment:
Q  126 actgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    ||||||||  |||||| |||||| |||||||||||||| |||||||| | |||||||||    
T  22423882 actgacaccctgacactactaataatttgagaaaatcacataattcaatataattatat 22423824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Complemental strand, 23016040 - 23016002
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaattata 183  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  23016040 taatcatttgagaaaatcacataattcagtgtaattata 23016002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Original strand, 25863212 - 25863250
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaattata 183  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  25863212 taataatttgagaaaatgatataattcagtgtaattata 25863250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 186
Target Start/End: Original strand, 31682048 - 31682082
Alignment:
Q  152 ttgagaaaatcatataattcagtgtaattatatgt 186  Q
    ||||||||||||||||||| |||||||||||||||    
T  31682048 ttgagaaaatcatataatttagtgtaattatatgt 31682082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 42893330 - 42893404
Alignment:
Q  107 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||||| ||||| |||||   |||||  ||||| |||||| ||||||| ||||| |||||||||||    
T  42893330 atgaagcacggatatggacacggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaatta 42893404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 6247609 - 6247666
Alignment:
Q  124 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    |||||||||||  |||||  ||||| |||||| ||||||| |||||||||||||||||    
T  6247609 acactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaatta 6247666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 15405115 - 15405070
Alignment:
Q  136 tgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    |||||| |||||| |||||| |||||||||||||||| ||||||||    
T  15405115 tgacacaactaataatttgaaaaaatcatataattcaatgtaatta 15405070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 17593783 - 17593734
Alignment:
Q  135 ttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    |||| ||| ||||| ||||||||||||||  |||||||||||||||||||    
T  17593783 ttgaaaccgctaataatttgagaaaatcacgtaattcagtgtaattatat 17593734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 19438329 - 19438386
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatt 180  Q
    ||||||||||| | |||| | || || |||||||||||||| ||||||||||||||||    
T  19438329 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 19438386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 36838544 - 36838593
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||| |||||||||||| | |||||| ||||||||||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgtaattatatgtg 36838593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 9449455 - 9449519
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||| ||||  ||||||| |||| |||||||||||||| |||||||| ||||| ||| ||||    
T  9449455 gacactggcacgccgacaccaataataatttgagaaaatcacataattcaatgtaactatttgtg 9449519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 11685925 - 11685989
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||| |  |||||| ||||| |||||||||| ||  |||||| ||||||||||||||||    
T  11685925 gacactgacatgccgacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtg 11685989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 16304500 - 16304440
Alignment:
Q  120 atagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatt 180  Q
    ||||| |||||||||  |||||| || |||||||||  ||||||||||||| |||||||||    
T  16304500 atagatactgacacgccgacaccgctgattatttgaataaatcatataatttagtgtaatt 16304440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 26312782 - 26312818
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatatgt 186  Q
    ||||||||||||||  |||||||||||||||||||||    
T  26312782 atttgagaaaatcaattaattcagtgtaattatatgt 26312818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 27932235 - 27932279
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    |||||| ||||| |||||||||||| | |||||||||||||||||    
T  27932235 gacaccgctaataatttgagaaaattacataattcagtgtaatta 27932279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 30098312 - 30098372
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    ||||||||||||  || |||  |||| |||||||||||||| |||||||| ||||||||||    
T  30098312 gacactgacacgacgaaaccgttaataatttgagaaaatcacataattcaatgtaattata 30098372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 39758290 - 39758322
Alignment:
Q  155 agaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||| |||||||||||||||||||||||    
T  39758290 agaaaatcacataattcagtgtaattatatgtg 39758322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 187
Target Start/End: Complemental strand, 56488599 - 56488519
Alignment:
Q  107 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||| ||||| ||||| |||||||||||||| ||||  |||||||||||||||||||||||| ||||| |||||||    
T  56488599 atgaagcacagatatggacaccgacacgttgacaccgctaacaatttgagaaaatcatataattcagggtaatcatatgtg 56488519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 36635310 - 36635374
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||   ||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  36635310 gacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatatgtg 36635374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 40179709 - 40179647
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatg 185  Q
    ||||||||||||||||||||| ||||  ||||| ||||||| |||||||||||||||||||||    
T  40179709 gacactgacacgttgacaccattaatagtttgaaaaaatcacataattcagtgtaattatatg 40179647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 22440673 - 22440606
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacg 190  Q
    |||||||| || | ||||||  |||| |||||||||||||| ||||||||||||||||||||||||||    
T  22440673 gacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtgacg 22440606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 4383338 - 4383411
Alignment:
Q  107 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||||  ||||||||||||| || || |||||| |||||| ||||||| |||||||||||||||||    
T  4383338 atgaagcacggatacggacactgacacgtcgatacaactaataatttga-aaaatcacataattcagtgtaatta 4383411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 13783267 - 13783331
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||   |||||| ||||||||||||||| |||| | |||||||||||||||||||||    
T  13783267 gacactgacacaccgacaccgctaattatttgagaagatcacaaaattcagtgtaattatatgtg 13783331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 21539943 - 21539879
Alignment:
Q  120 atagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    ||||||||||||| |  ||||||| |||| |||| |||||||||||||||| |||||||||||||    
T  21539943 atagacactgacatgccgacaccattaataatttaagaaaatcatataatttagtgtaattatat 21539879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 5775417 - 5775358
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 196  Q
    ||||||| |||| |||||||||||||| |||||| |||||||||||||||| ||| ||||    
T  5775417 gacaccattaataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtca 5775358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 186
Target Start/End: Complemental strand, 8402787 - 8402752
Alignment:
Q  151 tttgagaaaatcatataattcagtgtaattatatgt 186  Q
    ||||||||||||||||||||||||||||||||||||    
T  8402787 tttgagaaaatcatataattcagtgtaattatatgt 8402752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 40613441 - 40613500
Alignment:
Q  128 tgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||  |||||| |||||  ||||||||||||| |||||||||||||||||||||||    
T  40613441 tgacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtg 40613500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 3712568 - 3712518
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||| ||||| ||||||||||||||| ||||||| ||||||||||||||    
T  3712568 gacaccgctaataatttgagaaaatcatgtaattcaatgtaattatatgtg 3712518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 8423777 - 8423731
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    |||||| ||||| |||||||||||||| |||||||||||||||||||    
T  8423777 gacaccgctaataatttgagaaaatcacataattcagtgtaattata 8423731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 30522973 - 30522927
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    ||||| |||||||||||||||||||| |||||||||||||| |||||    
T  30522973 acaccgctaattatttgagaaaatcacataattcagtgtaactatat 30522927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 40742591 - 40742641
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||| |||| ||||||||||||||||||||  ||||||||||||||||    
T  40742591 gacaccattaataatttgagaaaatcatataatctagtgtaattatatgtg 40742641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 56257940 - 56257978
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattat 182  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  56257940 ctaataatttgagaaaatcatataattcagtgtaattat 56257978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 903930 - 903971
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaattatatgt 186  Q
    |||| |||||||||||||| ||||||||||||||||||||||    
T  903930 taataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 7970535 - 7970568
Alignment:
Q  153 tgagaaaatcatataattcagtgtaattatatgt 186  Q
    ||||||||||||||||||||||||||||||||||    
T  7970535 tgagaaaatcatataattcagtgtaattatatgt 7970568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 35723458 - 35723393
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaat-catataattcagtgtaattatatgtg 187  Q
    ||||||||||||  |||||| ||||| |||||||||||| || |||||||| ||||||||||||||    
T  35723458 gacactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtg 35723393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 15029751 - 15029815
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||  |||||  ||||| |||||| || |||| |||||||||||||||||||||||    
T  15029751 gacactgacacgcagacactgctaataatttgaaaatatcacataattcagtgtaattatatgtg 15029815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 37496690 - 37496746
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaat 179  Q
    ||||||||||||||||||||  ||||| ||||||||||| | |||||||| ||||||    
T  37496690 gacactgacacgttgacaccgataattttttgagaaaatgacataattcaatgtaat 37496746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 37698719 - 37698759
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  37698719 ctaataatttgagaaaattatataattcagtgtaattatat 37698759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 999400 - 999357
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||    
T  999400 ctaataatttgagtaaatcatataatttagtgtaattatatgtg 999357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 7214580 - 7214533
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattatatg 185  Q
    ||||||||||| |||||||||||||| |||||| | ||||||||||||    
T  7214580 acaccactaataatttgagaaaatcacataatttaatgtaattatatg 7214533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 54580083 - 54580036
Alignment:
Q  136 tgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    |||||| |||||| |||||| ||||||| |||||||||||||||||||    
T  54580083 tgacacaactaataatttgaaaaaatcacataattcagtgtaattata 54580036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 35952669 - 35952627
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgt 186  Q
    ||||| |||||| |||||||||||||||| |||||||||||||    
T  35952669 ctaataatttgataaaatcatataattcaatgtaattatatgt 35952627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 49653040 - 49652982
Alignment:
Q  128 tgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgt 186  Q
    ||||||||| | || |||||| |||| ||||||||| |||||||||| |||||||||||    
T  49653040 tgacacgtttatactactaataatttaagaaaatcagataattcagtataattatatgt 49652982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 16189722 - 16189759
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  16189722 atttgagaaaatcacataattcagtgtaattatgtgtg 16189759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 18576083 - 18576046
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  18576083 atttgagaaaatcacataattcggtgtaattatatgtg 18576046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 187
Target Start/End: Complemental strand, 22234980 - 22234899
Alignment:
Q  107 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaa-tcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||||  ||||| ||||||  |||||| ||||  |||||| |||| ||| |||||||||||||||| ||||||    
T  22234980 atgaagcacggatacggacacggacacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgtaattctatgtg 22234899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 24613768 - 24613719
Alignment:
Q  129 gacacgttgacaccactaattatttgagaaaatcatataattcagtgtaa 178  Q
    ||||||| ||||| |||||| |||||||||||||| |||||||| |||||    
T  24613768 gacacgtcgacacaactaataatttgagaaaatcacataattcaatgtaa 24613719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 680061 - 680005
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaat 179  Q
    ||||||||||||| | ||||| ||||||||||||||||  | |||||||| ||||||    
T  680061 gacactgacacgtcggcaccagtaattatttgagaaaaaaacataattcaatgtaat 680005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 9996853 - 9996889
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatatgt 186  Q
    |||||||||||||| |||||||||| |||||||||||    
T  9996853 atttgagaaaatcacataattcagtataattatatgt 9996889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 26504372 - 26504308
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||| || | |||||  ||||| |||| ||||||||| ||| |||||||||||||||||||    
T  26504372 gacactgaaacatcgacactgctaataatttaagaaaatcaaatagttcagtgtaattatatgtg 26504308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 30982935 - 30982891
Alignment:
Q  139 caccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    |||| ||||| |||||||||||||| ||| |||||||||||||||    
T  30982935 caccgctaatgatttgagaaaatcacatatttcagtgtaattata 30982891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 12941008 - 12940950
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||    
T  12941008 gacactgacacgttgacacaactaataatttgaaaaaatcatataattcagtgtaatta 12940950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 20242800 - 20242736
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||  ||||| ||||||| ||| ||||||||| |||||||||||||||||||||||    
T  20242800 gacactgacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtg 20242736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 21616748 - 21616812
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||||  |||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  21616748 gacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 21616812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 23718012 - 23718076
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||   |||||| ||||| |||||||||| ||| |||||||||||||||||||||||    
T  23718012 gacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtg 23718076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 24105684 - 24105748
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||   |||||| ||||| |||||||||| ||| |||||||||||||||||||||||    
T  24105684 gacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtg 24105748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 29970622 - 29970558
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||| |||||||| ||||| |||||||||||||  ||| ||||||||||| |||||||    
T  29970622 gacactgacacattgacaccgctaataatttgagaaaatcgcatagttcagtgtaatcatatgtg 29970558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 4882766 - 4882711
Alignment:
Q  126 actgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    |||||||||| || ||| |||||||||||| ||||| |||||||||||||||||||    
T  4882766 actgacacgtcgataccgctaattatttgaaaaaatgatataattcagtgtaatta 4882711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 34691857 - 34691814
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| |||||| |||||||||||||||||||||||||||||||    
T  34691857 ctaataatttgataaaatcatataattcagtgtaattatatgtg 34691814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 34714269 - 34714226
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| |||||| |||||||||||||||||||||||||||||||    
T  34714269 ctaataatttgataaaatcatataattcagtgtaattatatgtg 34714226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 44860319 - 44860370
Alignment:
Q  136 tgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||| ||||| |||||||||||||  |||||||||||||||||||||||    
T  44860319 tgacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtg 44860370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 16069327 - 16069261
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgac 189  Q
    ||||||||||||  ||||||  |||| |||| | |||||||||||||||||||||||||| ||||||    
T  16069327 gacactgacacgccgacaccgttaataatttaaaaaaatcatataattcagtgtaattatttgtgac 16069261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 20539747 - 20539689
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||| |||||  ||||| |||||| |||||||||||||| ||||||||||    
T  20539747 gacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaatta 20539689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 21782890 - 21782832
Alignment:
Q  124 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattat 182  Q
    |||||||||||  |||||  ||||| |||||||||||||| ||||||||||||||||||    
T  21782890 acactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 30527646 - 30527604
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||| ||||||||||||||||||||| ||||||||||||||||    
T  30527646 taataatttgagaaaatcatataatttagtgtaattatatgtg 30527604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 37411303 - 37411253
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||| ||||| |||||||||||||| |||||||||||| ||||||||||    
T  37411303 gacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtg 37411253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 2665946 - 2665897
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||| |||| ||||||||| |||||| ||||||||||||||||    
T  2665946 acaccactaataattttagaaaatcacataatttagtgtaattatatgtg 2665897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 5367197 - 5367242
Alignment:
Q  142 cactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||| ||||||| |||||| |||||||||||||||||||||||    
T  5367197 cactaataatttgaggaaatcacataattcagtgtaattatatgtg 5367242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 28677909 - 28677958
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgt 186  Q
    |||||| ||||| |||||| ||||||| ||||||||||||||||||||||    
T  28677909 gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 36756418 - 36756357
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    |||||||||||||| ||||| |||||| ||||||  |||| | |||||||||||||||||||    
T  36756418 agacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattata 36756357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 24975384 - 24975336
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatg 185  Q
    |||||| ||||| ||||||||||||| ||||||||||||||| ||||||    
T  24975384 gacaccgctaataatttgagaaaatcgtataattcagtgtaaatatatg 24975336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 25846743 - 25846787
Alignment:
Q  139 caccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    |||||||||| |||||||||||||| || ||||||||||||||||    
T  25846743 caccactaataatttgagaaaatcacatgattcagtgtaattata 25846787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 31808063 - 31808127
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||   |||||| ||||| |||| | ||||||| |||||||||||||||||||||||    
T  31808063 gacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtg 31808127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 34785055 - 34784991
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||   ||||| ||||||| ||| ||||||||| |||||| ||||||||||||||||    
T  34785055 gacactgacacaccgacacaactaatttttttagaaaatcacataatttagtgtaattatatgtg 34784991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 38355935 - 38355887
Alignment:
Q  148 ttatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 196  Q
    |||||||||||||||| |||||||||||| |||||||||| ||| ||||    
T  38355935 ttatttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 38355887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 11670738 - 11670789
Alignment:
Q  120 atagacactgacacgttgacaccactaattatttgagaaaatcatataattc 171  Q
    |||||||||||||||| ||| |||||||| |||||| ||||||| |||||||    
T  11670738 atagacactgacacgtcgacgccactaataatttgaaaaaatcacataattc 11670789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 18276521 - 18276580
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 196  Q
    |||||| ||||| ||||||||||||||  ||||||||||||||||| |||| ||| ||||    
T  18276521 gacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtgtcggtgtca 18276580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 180
Target Start/End: Complemental strand, 22084883 - 22084848
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaatt 180  Q
    |||| |||||||||||||||||||||||||||||||    
T  22084883 taataatttgagaaaatcatataattcagtgtaatt 22084848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 187
Target Start/End: Original strand, 35056883 - 35056918
Alignment:
Q  152 ttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||| ||||||||||||||||||||||||||    
T  35056883 ttgagaaaaccatataattcagtgtaattatatgtg 35056918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 15909677 - 15909639
Alignment:
Q  151 tttgagaaaatcatataattcagtgtaattatatgtgac 189  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  15909677 tttgagaaaattacataattcagtgtaattatatgtgac 15909639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 18841086 - 18841028
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    |||||||||||| |||||| |||||| |||||| ||||| | |||||| ||||||||||    
T  18841086 gacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaatta 18841028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 27084232 - 27084302
Alignment:
Q  107 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgta 177  Q
    ||||||||||||||  ||||| |||||   |||||  ||||| ||||||||||||||||||||||| ||||    
T  27084232 atgaagcacggatacggacacggacactccgacactgctaataatttgagaaaatcatataattcaatgta 27084302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 35449521 - 35449563
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||| |||||||||||||| | |||||||||||||||||||||    
T  35449521 taataatttgagaaaatcacagaattcagtgtaattatatgtg 35449563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 39279691 - 39279725
Alignment:
Q  153 tgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||| |||||||||||||||||||||||    
T  39279691 tgagaaaatcaaataattcagtgtaattatatgtg 39279725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 39323250 - 39323308
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    |||||||| |||| |||||| ||||| |||||| ||||| | |||||||||||||||||    
T  39323250 gacactgaaacgtcgacaccgctaataatttgacaaaattacataattcagtgtaatta 39323308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 1327978 - 1328023
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattat 182  Q
    |||||| ||||| |||||||||||||||| |||||||| |||||||    
T  1327978 gacaccgctaataatttgagaaaatcataaaattcagtataattat 1328023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 2331795 - 2331839
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattat 182  Q
    |||||| |||| |||||||||||||| ||||||||||||| ||||    
T  2331795 acaccattaataatttgagaaaatcacataattcagtgtatttat 2331839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 30404923 - 30404851
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtc 195  Q
    ||||||||||||  |||||   |||| |||||| ||||||| ||||||||||||||||| | ||| |||||||    
T  30404923 gacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggcgtc 30404851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 36878437 - 36878507
Alignment:
Q  113 cacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    |||||| |||||||||||||||  |||||| ||||| |||||||||||||| |||||||||||||||||||    
T  36878437 cacggacatagacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattata 36878507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 7918285 - 7918220
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||||| ||||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  7918285 agacaatgacacgctgacatcactaataatttgagaaaatcacataattcagtgtaattatatgtg 7918220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 10572661 - 10572598
Alignment:
Q  124 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||  |||||||||||| |||||||||||||| ||||||| ||||||||| |||||    
T  10572661 acactgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaattaaatgtg 10572598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 1815227 - 1815301
Alignment:
Q  107 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||||  ||||||||||||  ||||| | ||||||||| | ||||||| |||||||||||||||||    
T  1815227 atgaagcacggatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaatta 1815301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 25361886 - 25361936
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  25361886 gacaccactgataatttgagaaaatcacataattcagtgtaattatatgtg 25361936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 28273161 - 28273103
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    |||||||||| | |||||| |||||| |||||| |||||||||||||||||||||||||    
T  28273161 gacactgacatgctgacacaactaatcatttgaaaaaatcatataattcagtgtaatta 28273103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 34298436 - 34298482
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||    
T  34298436 gacaccactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 38503320 - 38503370
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  38503320 gacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtg 38503370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 10233254 - 10233303
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  10233254 acaccactaataaattgagaaaatcacataattcagtgtaattatatgtg 10233303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 13997868 - 13997933
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||  ||||||  ||||||||| | ||||||| |||||||||||||||||||||||    
T  13997868 agacactgacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtg 13997933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 398838 - 398778
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    ||||||||||||  |||||| ||||| |||||| ||||||| |||||||||||||||||||    
T  398838 gacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 6427336 - 6427400
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||   ||||| ||||| |||||||||||||| |||||||| ||||||||||||||    
T  6427336 gacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtg 6427400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 14332700 - 14332652
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattatatgt 186  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  14332700 acaccactaataatttgagaaaatcacataatttagtgtaattatatgt 14332652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 17831604 - 17831540
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||  |||||| ||||| |||||||||||||| || |||||||||||| |||||||    
T  17831604 gacactgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtg 17831540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 48148116 - 48148049
Alignment:
Q  118 atatagacactgacacgttgacaccactaattatttgagaaaa-tcatataattcagtgtaattatat 184  Q
    ||||||| ||||||| ||||||||| ||||| |||| | |||| ||||||||||||||||||||||||    
T  48148116 atatagatactgacatgttgacaccgctaataattttaaaaaaatcatataattcagtgtaattatat 48148049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 1864931 - 1864889
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtg 1864889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 2896194 - 2896140
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgta 177  Q
    ||||||||||||  |||||| ||||| |||||||||||||| |||||||||||||    
T  2896194 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 9828044 - 9828094
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||| |||||| ||||||| |||||||||||||||| ||||||    
T  9828044 gacaccactaataatttgataaaatcacataattcagtgtaattttatgtg 9828094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 12443512 - 12443466
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgtgacg 190  Q
    ||||| |||||||||||||| |||||||||||||||| |||||||||    
T  12443512 ctaataatttgagaaaatcacataattcagtgtaattgtatgtgacg 12443466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 16927259 - 16927197
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    |||||||||||||| | ||   ||||| |||||| ||||||||||||||||||||||||||||    
T  16927259 agacactgacacgtcggcatagctaataatttgaaaaaatcatataattcagtgtaattatat 16927197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 19324550 - 19324612
Alignment:
Q  125 cactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||| |||| |||||  || || |||||||||||||| |||||||||||||||||||||||    
T  19324550 cactgatacgtcgacactgctgataatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 20157421 - 20157359
Alignment:
Q  125 cactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||| | |||||| ||||| || ||||||||||| ||||||||||||||| |||||||    
T  20157421 cactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtg 20157359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 24577259 - 24577201
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||| |||||| |||||| |||||| |||||| ||||||| |||||||||||||||||    
T  24577259 gacacggacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaatta 24577201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 25098614 - 25098564
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||| || || |||||||||||||| |||||||||||||||||||||||    
T  25098614 gacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtg 25098564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 40181878 - 40181920
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgt 186  Q
    ||||| |||||||||||||| ||||||||||||||||||||||    
T  40181878 ctaataatttgagaaaatcacataattcagtgtaattatatgt 40181920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 1486779 - 1486722
Alignment:
Q  126 actgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    ||||||||| ||||||  ||||| |||||| ||||||| |||||||||||||||||||    
T  1486779 actgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattata 1486722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 6415074 - 6415001
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 196  Q
    ||||||||||||  |||| | |||||||||||||||||||| ||||| |||| |||||| ||||| ||| ||||    
T  6415074 gacactgacacgccgacatcgctaattatttgagaaaatcacataatacagtttaattagatgtgtcggtgtca 6415001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 44482243 - 44482280
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||| |||||||||||||||||||||||    
T  44482243 atttgagaaaatcacataattcagtgtaattatatgtg 44482280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 8842788 - 8842724
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgt 186  Q
    |||||||||||||  | |||||||| | ||||||||||| ||||||||| | |||||||||||||    
T  8842788 agacactgacacgccggcaccactagtaatttgagaaaaacatataatttaatgtaattatatgt 8842724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 9033081 - 9033021
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaa-tcatataattcagtgtaattat 182  Q
    |||||||||||||  ||||||||||| |||||| |||| ||| ||||||||||||||||||    
T  9033081 gacactgacacgtcaacaccactaataatttgaaaaaaatcacataattcagtgtaattat 9033021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 9629973 - 9629913
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    ||||| ||||| | |||||| ||||| |||||| |||||||||||||||||||| ||||||    
T  9629973 gacaccgacacatcgacaccgctaataatttgataaaatcatataattcagtgtgattata 9629913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 5898340 - 5898277
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatg 185  Q
    ||||||||| |||  |||||| ||||| || ||| ||||||| |||||||||||||||||||||    
T  5898340 agacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatg 5898277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 19562693 - 19562630
Alignment:
Q  124 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||  |||||  ||||| |||||||||||||  ||| |||||||||||||||||||    
T  19562693 acactgacacgccgacactgctaataatttgagaaaatctcatagttcagtgtaattatatgtg 19562630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 187
Target Start/End: Original strand, 34371728 - 34371763
Alignment:
Q  152 ttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||| |||||||||||||||||||||||    
T  34371728 ttgagaaaatcacataattcagtgtaattatatgtg 34371763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 39130835 - 39130776
Alignment:
Q  128 tgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||| |||||| | |||| |||| ||||||| |||||||| ||||||||||||||||    
T  39130835 tgacacgctgacactattaataattttagaaaattatataatttagtgtaattatatgtg 39130776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 49872844 - 49872887
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| |||||||||||  |||||||||||||||||||||||||    
T  49872844 ctaatcatttgagaaaactatataattcagtgtaattatatgtg 49872887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 9690346 - 9690275
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtc 195  Q
    ||||||||||||| ||||||| ||||| |  ||||||||||  | ||||||||||||| ||||||| |||||||    
T  9690346 agacactgacacgctgacaccgctaataaactgagaaaatc--acaattcagtgtaatcatatgtgtcggcgtc 9690275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 22881689 - 22881631
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||  ||||| |||||| |||||| ||||||| |||||| ||||||||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaatta 22881631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 41500779 - 41500717
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatg 185  Q
    |||||||||| ||||||||||||| | |||| ||||||| |||||||| | |||||| |||||    
T  41500779 gacactgacatgttgacaccactagtaatttaagaaaatgatataattgaatgtaatcatatg 41500717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 41510957 - 41510895
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatg 185  Q
    |||||||||| ||||||||||||| | |||| ||||||| |||||||| | |||||| |||||    
T  41510957 gacactgacatgttgacaccactagtaatttaagaaaatgatataattgaatgtaatcatatg 41510895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 42359522 - 42359464
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    |||||||||||| ||||||  ||||| |||||| ||||||| | |||||||||||||||    
T  42359522 gacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaatta 42359464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 46348456 - 46348398
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||  |||||  ||||| |||||| |||||||||||||| ||||||||||    
T  46348456 gacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaatta 46348398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 187
Target Start/End: Original strand, 52903269 - 52903299
Alignment:
Q  157 aaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||||||||||||||||||||    
T  52903269 aaaatcatataattcagtgtaattatatgtg 52903299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 9709821 - 9709870
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||| |||||||||||||| |||||||  ||||||||||||||    
T  9709821 acaccgctaataatttgagaaaatcacataattcgttgtaattatatgtg 9709870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 12707928 - 12707883
Alignment:
Q  141 ccactaattatttgagaaaatcatataattcagtgtaattatatgt 186  Q
    |||||||| |||| |||||||||||||||| |||| ||||||||||    
T  12707928 ccactaataatttaagaaaatcatataatttagtgcaattatatgt 12707883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 12713382 - 12713337
Alignment:
Q  141 ccactaattatttgagaaaatcatataattcagtgtaattatatgt 186  Q
    |||||||| |||| ||||||||| |||||| |||||||||||||||    
T  12713382 ccactaataatttaagaaaatcacataatttagtgtaattatatgt 12713337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 12717473 - 12717428
Alignment:
Q  141 ccactaattatttgagaaaatcatataattcagtgtaattatatgt 186  Q
    |||||||| |||| ||||||||| |||||| |||||||||||||||    
T  12717473 ccactaataatttaagaaaatcacataatttagtgtaattatatgt 12717428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 31015050 - 31015087
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  31015050 ctaataatttgagaaaatcacataattcagtgtaatta 31015087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 36905998 - 36906047
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||| || ||||||||||| ||||||||| |||||||||||||    
T  36905998 acaccgctaataatctgagaaaatcacataattcagagtaattatatgtg 36906047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 38078733 - 38078676
Alignment:
Q  124 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    |||||||||||| |||||  ||||| |||||| ||||||| |||||||| ||||||||    
T  38078733 acactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaatta 38078676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 609530 - 609482
Alignment:
Q  124 acactgacacgttgacaccactaattatttgagaaaatcatataattca 172  Q
    |||||||||||  |||||||||||| |||||||||||| | ||||||||    
T  609530 acactgacacgccgacaccactaataatttgagaaaattacataattca 609482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 187
Target Start/End: Complemental strand, 11606024 - 11605944
Alignment:
Q  107 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||| | ||||| ||||||| | || | |||| | ||||| |||||| ||||||||||||||||||| ||||| |||||    
T  11606024 atgaagtatggatacagacacttaaacatcgacatcgctaataatttgaaaaaatcatataattcagtgaaattacatgtg 11605944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 27966044 - 27966008
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatatgt 186  Q
    |||||||||||||||  ||||||||||||||||||||    
T  27966044 atttgagaaaatcattaaattcagtgtaattatatgt 27966008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 30749858 - 30749890
Alignment:
Q  155 agaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||| |||||||||||||||||||||||    
T  30749858 agaaaatcacataattcagtgtaattatatgtg 30749890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 30771309 - 30771341
Alignment:
Q  155 agaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||| |||||||||||||||||||||||    
T  30771309 agaaaatcacataattcagtgtaattatatgtg 30771341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 32461550 - 32461478
Alignment:
Q  109 gaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    |||||||||||| ||||| |||||||  | ||| |||||| |||||| ||||||| |||||| | ||||||||    
T  32461550 gaagcacggatacagacagtgacacgccggcacaactaataatttgaaaaaatcacataatttaatgtaatta 32461478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 35999375 - 35999331
Alignment:
Q  143 actaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||| |||| |||||||||||||||| ||| ||||||||||||    
T  35999375 actaataatttaagaaaatcatataatttagtataattatatgtg 35999331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 37598818 - 37598877
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    ||||||||||||  ||||| |||||| |||||| ||||||| | |||||||||||||||||    
T  37598818 gacactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattata 37598877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 34897071 - 34897135
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||||| |||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  34897071 gacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 34897135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 4786411 - 4786347
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||  ||||||| |||| |||| ||||||||| |||||||||||||||||||||||    
T  4786411 gacactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtg 4786347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 39954352 - 39954284
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacgg 191  Q
    ||||| ||||||  |||||| ||||| |||||||||||||| |||||| ||||||||||||||||||||    
T  39954352 gacaccgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgacgg 39954284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 20679469 - 20679395
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 196  Q
    ||||||||||| || |||||| ||||| |||||||||||||| ||| ||||||||||||||| ||| ||| ||||    
T  20679469 agacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtca 20679395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 14134685 - 14134746
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    ||||| ||||||| ||||  |||||| |||||||||||||| ||||||||||||||||||||    
T  14134685 gacacggacacgtcgacaatactaataatttgagaaaatcacataattcagtgtaattatat 14134746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 24362276 - 24362211
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||| ||||||  |||||| ||||| |||||||| ||||| |||||||||||||||||||||||    
T  24362276 agacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtg 24362211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 12606881 - 12606829
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 196  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  12606881 ctaataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgtca 12606829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 7658463 - 7658510
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||||    
T  7658463 gacaccactaataatttgagaaaattacataattcagtgtaattatat 7658510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 12570813 - 12570746
Alignment:
Q  117 gatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    ||||||||||| |||||||||||||| ||||| |||| |||||| |  |||||| |||||||||||||    
T  12570813 gatatagacaccgacacgttgacaccgctaataatttaagaaaaacgcataattaagtgtaattatat 12570746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 12570587 - 12570517
Alignment:
Q  117 gatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||| |||||| |||||||||||||  ||||| |||| |||||| || |||||| ||||||||||||||||    
T  12570587 gatacagacaccgacacgttgacactgctaataatttaagaaaaacacataattaagtgtaattatatgtg 12570517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 4611534 - 4611583
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgt 186  Q
    |||||| ||||| |||||||||||| | ||||||||||||||||||||||    
T  4611534 gacaccgctaataatttgagaaaataacataattcagtgtaattatatgt 4611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 15816215 - 15816142
Alignment:
Q  110 aagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    ||||| |||||  ||||||||||||  ||||| |||||| |||||| ||||||| |||||| ||||||||||||    
T  15816215 aagcatggatacggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattata 15816142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 13203628 - 13203688
Alignment:
Q  124 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    ||||||| ||||  ||| ||||||| |||||||||||| | ||||||||||||||||||||    
T  13203628 acactgatacgtcaacaacactaataatttgagaaaattacataattcagtgtaattatat 13203688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 13844669 - 13844605
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||||  |||||  ||||| |||||||||||||| |||||| ||||||||||||||||    
T  13844669 gacacggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtg 13844605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 18964163 - 18964227
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||  | || ||||||| ||| ||||||||| |||||||| ||||||||||||||    
T  18964163 gacactgacacgtcaagacaactaatttttttagaaaatcacataattcaatgtaattatatgtg 18964227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 36934656 - 36934720
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||| |||||| |||||| ||||| ||| || ||||||| |||||||| ||||||||||||||    
T  36934656 gacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaattatatgtg 36934720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 3025558 - 3025597
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattata 183  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  3025558 ctaataatttgagaaaatcacataattcagtgtaattata 3025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 11815815 - 11815862
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataatt 170  Q
    ||||||||||||||||||||| |||| ||||||||||||  |||||||    
T  11815815 gacactgacacgttgacaccaataataatttgagaaaatgttataatt 11815862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 14731719 - 14731762
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||    
T  14731719 ctaataatttgagaaaatcacataatttagtgtaattatatgtg 14731762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 24669418 - 24669477
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||| |||||||  |||| ||||||| |||| | |||||||||||||||||    
T  24669418 agacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaatta 24669477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 31236629 - 31236586
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| |||||||||||||| |||||||| ||||||||||||||    
T  31236629 ctaataatttgagaaaatcacataattcaatgtaattatatgtg 31236586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 11803267 - 11803309
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||| |||| ||||||||| |||||||||||||||||||||||    
T  11803267 taataatttaagaaaatcacataattcagtgtaattatatgtg 11803309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 11927137 - 11927095
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||| |||||| ||||||| |||||||||||||||||||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtg 11927095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 12559158 - 12559116
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgt 186  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||    
T  12559158 ctaataatttgagaaaatgatataattcagtgtaatcatatgt 12559116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 36450827 - 36450769
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||  ||||| |||||| |||||| ||||||| | |||||||||||||||    
T  36450827 gacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaatta 36450769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 14634206 - 14634153
Alignment:
Q  131 cacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    ||||| |||||| ||||  |||| ||||||| ||||||||||||||||||||||    
T  14634206 cacgtcgacaccgctaacaatttaagaaaattatataattcagtgtaattatat 14634153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 24017497 - 24017452
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattat 182  Q
    |||| ||||||| |||||||| |||||||||||||| |||||||||    
T  24017497 gacatcactaataatttgagacaatcatataattcaatgtaattat 24017452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 26418388 - 26418351
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  26418388 atttgagaaaatcatattattcagtgtaatcatatgtg 26418351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 29447177 - 29447128
Alignment:
Q  129 gacacgttgacaccactaattatttgagaaaatcatataattcagtgtaa 178  Q
    ||||||| ||||| |||||| |||||||||||||| |||||||| |||||    
T  29447177 gacacgtcgacacaactaataatttgagaaaatcacataattcaatgtaa 29447128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 34201113 - 34201056
Alignment:
Q  129 gacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgt 186  Q
    ||||| ||||||| | |||| |||||||||||| | |||||||| |||||||||||||    
T  34201113 gacacattgacactaataataatttgagaaaatgacataattcaatgtaattatatgt 34201056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 12124078 - 12124138
Alignment:
Q  107 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatata 167  Q
    |||||||||||||| |||||| |||| |   ||||| ||||| ||||||||||||||||||    
T  12124078 atgaagcacggatacagacacggacaagccaacaccgctaataatttgagaaaatcatata 12124138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 18067994 - 18067954
Alignment:
Q  136 tgacaccactaattatttgagaaaatcatataattcagtgt 176  Q
    ||||||| ||||| |||||||||||||| ||||||||||||    
T  18067994 tgacaccgctaataatttgagaaaatcacataattcagtgt 18067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Complemental strand, 26902216 - 26902184
Alignment:
Q  155 agaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||| |||||||||||||||||||||||    
T  26902216 agaaaatcacataattcagtgtaattatatgtg 26902184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 31109591 - 31109527
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||  ||||||  |||| |||||||||||||| | |||||||| ||| ||||||||    
T  31109591 gacactgacacgccgacaccgttaataatttgagaaaatcaaacaattcagtctaactatatgtg 31109527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 22868028 - 22868092
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||  |||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  22868028 gacactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtg 22868092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 3520416 - 3520351
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||||| |||||||  |||| ||||||||||||||||||||||| ||||||||||||||    
T  3520416 agacattgacacgctgacaccgataatcatttgagaaaatcatataattcaatgtaattatatgtg 3520351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 6630986 - 6630921
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||  |||||||||||| |||||||||| |||  ||||||||||||||||||||||    
T  6630986 agacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtg 6630921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 32308106 - 32308170
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||  |||||| ||||| |||||||||||||| |||||||||||||||| ||||||    
T  32308106 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtg 32308170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 42720963 - 42720899
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||||||||| ||||| |||||| ||||||| |||||| | ||||||||||||||    
T  42720963 gacactgacacgttgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtg 42720899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 5835231 - 5835306
Alignment:
Q  121 tagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 196  Q
    |||||||||| |||  ||||||||||||  ||||||||||| | ||||||||||||||||||||||| ||| ||||    
T  5835231 tagacactgatacgccgacaccactaatagtttgagaaaataacataattcagtgtaattatatgtgtcggtgtca 5835306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 5235971 - 5236033
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    |||||||||||||| |||||| ||||| |||| ||||||| |||||||| |||||||||||||    
T  5235971 agacactgacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaattatat 5236033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 21141049 - 21140995
Alignment:
Q  129 gacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    ||||||| |||||||||||| |||| |||||||||||||||||||||| ||||||    
T  21141049 gacacgtcgacaccactaataatttaagaaaatcatataattcagtgtgattata 21140995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 22602781 - 22602719
Alignment:
Q  125 cactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||  ||||||   |||||||||||||||||| |||||||||||||||||||||||    
T  22602781 cactgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtg 22602719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 23128728 - 23128670
Alignment:
Q  129 gacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||| |||||||| |||| ||||||||||| |||||||||||||||||| |||||||    
T  23128728 gacacgctgacaccaataataatttgagaaaaccatataattcagtgtaatcatatgtg 23128670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 27945027 - 27945085
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||  |||||||||||| |||||||||||| | |||||||||||||||||    
T  27945027 gacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaatta 27945085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 187
Target Start/End: Original strand, 2948653 - 2948733
Alignment:
Q  107 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||| ||||||||| |||||||||  |||||| || || |||| |||||||||  ||||| ||||||||||||||||    
T  2948653 atgaagcatggatatagatactgacacgccgacaccgctgataattttagaaaatcacgtaatttagtgtaattatatgtg 2948733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 26733290 - 26733354
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||| |||||| ||||| |||||| ||||||| |||||||||| |||||| |||||    
T  26733290 gacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtg 26733354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 187
Target Start/End: Original strand, 9482905 - 9482984
Alignment:
Q  108 tgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||  |||||||||||   |||| | || || |||||||||||||| | |||||||||||||||||||||    
T  9482905 tgaagcacggatacggacactgacacaccgacatcgctgataatttgagaaaatcacacaattcagtgtaattatatgtg 9482984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 20549778 - 20549841
Alignment:
Q  124 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||   |||||| ||||| ||||||||||||||  ||||||||||||||||||||||    
T  20549778 acactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtg 20549841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 5548676 - 5548726
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||| || || |||||||||||||| |||||||||||||||||||||||    
T  5548676 gacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtg 5548726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 2034434 - 2034491
Alignment:
Q  130 acacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||| |||||||||||| ||||||||| ||||||||||| ||||||  ||||||||    
T  2034434 acacgtcgacaccactaataatttgagaatatcatataatttagtgtatatatatgtg 2034491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 15902807 - 15902872
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||| |  ||||||| |||| |||||| ||||||| |||||| ||||||||||||||||    
T  15902807 agacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtg 15902872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 26329456 - 26329383
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtc 195  Q
    |||||||||||||  |||| |  |||| ||||||||||| || | ||||||||||||||||||||| |||||||    
T  26329456 agacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtc 26329383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 29787428 - 29787383
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattat 182  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||||    
T  29787428 gacaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 1401011 - 1401071
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    |||||||||||| ||| | | ||||| |||||||||| ||| |||||||||||||||||||    
T  1401011 gacactgacacgctgatatcgctaataatttgagaaactcacataattcagtgtaattata 1401071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 4909138 - 4909201
Alignment:
Q  124 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||| |||| |||||||||| |||| |||||||||||| | |||||||| |||||| |||||||    
T  4909138 acacggacaggttgacaccaataataatttgagaaaattacataattcattgtaatcatatgtg 4909201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 7758321 - 7758372
Alignment:
Q  136 tgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||| |||| ||||||| |||||||||||| ||||||| ||||    
T  7758321 tgacaccactaataattttagaaaattatataattcagtataattatgtgtg 7758372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 17851438 - 17851481
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||    
T  17851438 ctaataattttagaaaatcacataattcagtgtaattatatgtg 17851481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 18569124 - 18569069
Alignment:
Q  129 gacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    |||||||| | |||| |||| |||||||||||| |||||| |||||||||||||||    
T  18569124 gacacgttaataccaataatgatttgagaaaatgatataaatcagtgtaattatat 18569069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 23191882 - 23191945
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgt 186  Q
    |||||||| |||  |||||| ||||| |||||||||||||| ||| ||||||||||||| ||||    
T  23191882 gacactgatacgccgacaccgctaataatttgagaaaatcacatatttcagtgtaattacatgt 23191945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 2424621 - 2424659
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattat 182  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  2424621 ctaataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 8239101 - 8239059
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||| |||| |||||||| ||||||||||||||||||||||||    
T  8239101 taataatttaagaaaatcttataattcagtgtaattatatgtg 8239059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 185
Target Start/End: Original strand, 10377525 - 10377555
Alignment:
Q  155 agaaaatcatataattcagtgtaattatatg 185  Q
    |||||||||||||||||||||||||||||||    
T  10377525 agaaaatcatataattcagtgtaattatatg 10377555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 181
Target Start/End: Original strand, 13300416 - 13300454
Alignment:
Q  143 actaattatttgagaaaatcatataattcagtgtaatta 181  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  13300416 actaataatttgaaaaaatcatataattcagtgtaatta 13300454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 182
Target Start/End: Original strand, 14729667 - 14729746
Alignment:
Q  107 atgaagcacggatatagacactgacacg----ttgacaccactaattatttgagaaaatcatataattcagtgtaattat 182  Q
    |||||||||||||| | |||| ||||||    |||| ||| ||||| ||||||||||||||  |||||||||||||||||    
T  14729667 atgaagcacggatacaaacacggacacggccattgaaaccgctaataatttgagaaaatcacgtaattcagtgtaattat 14729746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 16341504 - 16341546
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||| |||||||||||||| |||||| ||||||||||||||||    
T  16341504 taataatttgagaaaatcacataattaagtgtaattatatgtg 16341546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 19206050 - 19206100
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||| ||||| |||||||||||||| |||||||| | ||||||||||||    
T  19206050 gacaccgctaataatttgagaaaatcacataattcattataattatatgtg 19206100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 22484010 - 22484084
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 196  Q
    |||||||||||||  |||||| ||||| |||| |||||||   |||||||||| |||||||||||| ||| ||||    
T  22484010 agacactgacacgccgacaccgctaataattttagaaaattgcataattcagtataattatatgtgtcggtgtca 22484084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 41020478 - 41020544
Alignment:
Q  119 tatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatg 185  Q
    |||| |||||||||||| ||||| |||||| ||||   ||||||| |||||| ||||||||||||||    
T  41020478 tataaacactgacacgtcgacacaactaataatttacaaaaatcacataatttagtgtaattatatg 41020544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 11890970 - 11890933
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaattat 182  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  11890970 taataatttgaaaaaatcatataattcagtgtaattat 11890933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 17307906 - 17307943
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||| | |||||||||||||||||||||||    
T  17307906 atttgagaaaataacataattcagtgtaattatatgtg 17307943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 25791638 - 25791702
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||  |||||| |||||||||||||||| ||| |||| ||| |||| |||||||||    
T  25791638 agacactgacacgccgacaccgctaattatttgagaaattcacataa-tcaatgtagttatatgtg 25791702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 27732305 - 27732248
Alignment:
Q  130 acacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||| |  |||| |||| ||||||| | |||||||||||||||||||||||    
T  27732305 acacgttgacaacgttaataatttaagaaaattacataattcagtgtaattatatgtg 27732248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 11831432 - 11831476
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||| |||||| |||||| |||||||||||||| ||||||||||    
T  11831432 gacacaactaataatttgaaaaaatcatataatttagtgtaatta 11831476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 18013147 - 18013083
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||   |||||| |||||| |||| | ||||| | |||||||||||||||||||||||    
T  18013147 gacactgacattctgacactactaataatttaaaaaaattacataattcagtgtaattatatgtg 18013083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 27093472 - 27093424
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatg 185  Q
    |||||| ||||| |||| ||||||||| |||||| ||||||||||||||    
T  27093472 gacaccgctaataatttaagaaaatcacataatttagtgtaattatatg 27093424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 27184829 - 27184877
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatg 185  Q
    |||||| ||||| |||| ||||||||| |||||| ||||||||||||||    
T  27184829 gacaccgctaataatttaagaaaatcacataatttagtgtaattatatg 27184877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 30516430 - 30516374
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaat 179  Q
    ||||||||||||| ||||| |  ||| |||||||||||| |||||||||| ||||||    
T  30516430 gacactgacacgtcgacactaacaataatttgagaaaatgatataattcaatgtaat 30516374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 92777 - 92851
Alignment:
Q  107 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||||  ||||||||||||  |||||| ||||| |||||||||||| | |||||||||||||||||    
T  92777 atgaagcacggatacggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaatta 92851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 13360444 - 13360382
Alignment:
Q  124 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgt 186  Q
    |||| ||||||| |||||||||| | |||||||||||||| ||||||||||||||||||||||    
T  13360444 acacagacacgtcgacaccactagtaatttgagaaaatcacataattcagtgtaattatatgt 13360382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 19040341 - 19040402
Alignment:
Q  126 actgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||  |||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  19040341 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 19040402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 7265666 - 7265602
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||   ||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  7265666 gacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 7265602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 13851722 - 13851786
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||| |||||| ||||| |||||||||||| |  ||||||||||||||||||||||    
T  13851722 gacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtg 13851786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 7723323 - 7723260
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgt 186  Q
    ||||||||||||| |||||  ||||| ||||||||||||||||||||||||  |||||||||||    
T  7723323 gacactgacacgtggacactgctaataatttgagaaaatcatataattcagcataattatatgt 7723260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 7996451 - 7996389
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatg 185  Q
    |||||||||| |  |||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  7996451 gacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatg 7996389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 8022350 - 8022412
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatg 185  Q
    |||||||||| |  |||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  8022350 gacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatg 8022412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 9658865 - 9658926
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    ||||||||||||  |||||| ||||| |||| ||||||||| ||||||||||||||||||||    
T  9658865 gacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatat 9658926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 196
Target Start/End: Original strand, 19044450 - 19044523
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 196  Q
    ||||||||||||  ||||| |||||| ||||||||| |||| |||||||||||| |||||||||| ||| ||||    
T  19044450 gacactgacacgccgacacgactaataatttgagaatatcacataattcagtgttattatatgtgtcggtgtca 19044523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 9027164 - 9027228
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||  |||||| ||||| |||||||| ||||| ||||||| |||||||||||||||    
T  9027164 gacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtg 9027228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 9025546 - 9025503
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  9025546 ctaataatttgagaaaatcacataattcagtgtaattatatgtg 9025503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 7086780 - 7086845
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||| ||||||| | |||  ||||| |||||||||||||| |||||| ||||||||||||||||    
T  7086780 agacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattatatgtg 7086845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 8389530 - 8389485
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    |||| |||||| |||| |||||||||||||||||||||||||||||    
T  8389530 acactactaataatttaagaaaatcatataattcagtgtaattata 8389485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 11591916 - 11591879
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||| |||||||||||||||||||||||    
T  11591916 atttgagaaaatcacataattcagtgtaattatatgtg 11591879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 13364751 - 13364714
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||||||||||||||||||| |||||||    
T  13364751 atttgagaaaatcatataattcagtgtaatcatatgtg 13364714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 26562702 - 26562739
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||||| |||||||||||||||||||||||    
T  26562702 atttgagaaaatcacataattcagtgtaattatatgtg 26562739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 30866202 - 30866153
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||| |||||||||||||| |||||||| ||||||||||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtg 30866153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 3398605 - 3398664
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    ||||||||||||  |||||  ||||| |||||| |||||||||||||||||||||||||||    
T  3398605 gacactgacacgccgacacagctaataatttga-aaaatcatataattcagtgtaattata 3398664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 5732583 - 5732519
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||  ||||||  |||| |||||||||||||| ||| || ||||||||||||||||    
T  5732583 gacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtg 5732519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 7938102 - 7938162
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    ||||||||||||  |||||  ||||| |||||| |||||||||||||| ||||||||||||    
T  7938102 gacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattata 7938162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 25096408 - 25096480
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgt 194  Q
    |||||| ||||||  |||||||||||| |||||||||||||| |||||  |||||||||| || || ||||||    
T  25096408 agacaccgacacgacgacaccactaataatttgagaaaatcacataatctagtgtaattacatatgtcggcgt 25096480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 9629374 - 9629433
Alignment:
Q  128 tgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||  |||||| | ||| |||||||||||||| |||||||| ||||||||||||||    
T  9629374 tgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtg 9629433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 16833293 - 16833352
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    |||||||||||||  ||||| |||||| |||||| ||||||| ||| |||||||||||||    
T  16833293 agacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaatta 16833352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 21924987 - 21924944
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||    
T  21924987 ctaataatttgagaatatcaaataattcagtgtaattatatgtg 21924944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 24832595 - 24832638
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||    
T  24832595 ctaataatttgagaaaatcttataatttagtgtaattatatgtg 24832638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 25038141 - 25038086
Alignment:
Q  126 actgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    |||||||||||||||||  |||| |||||||||||| | |||||| ||||||||||    
T  25038141 actgacacgttgacaccgttaataatttgagaaaattacataatttagtgtaatta 25038086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 32511726 - 32511679
Alignment:
Q  136 tgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    ||||||| ||||| |||| ||||||||| |||||||||||||||||||    
T  32511726 tgacaccgctaataatttaagaaaatcacataattcagtgtaattata 32511679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 1532225 - 1532290
Alignment:
Q  124 acactgacacgttgacac--cactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||||| |||||  | ||||| |||||| ||||| | |||||||||||||||||||||||    
T  1532225 acactgacacgtcgacacaccgctaataatttgataaaattacataattcagtgtaattatatgtg 1532290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 7377979 - 7378029
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||| ||||  |||||||||||||| |||||||| ||||||||||||||    
T  7377979 gacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtg 7378029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 8777046 - 8776988
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||  ||||| |||||| |||||| ||||||| | |||||||||||||||    
T  8777046 gacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaatta 8776988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 9617442 - 9617484
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||| |||||||||||||| |||||||| ||||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtg 9617484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 10770747 - 10770689
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||   |||| |||||| |||||| ||||||| |||||||||||||||||    
T  10770747 gacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaatta 10770689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 16766683 - 16766741
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||  |||||  ||||| |||||| ||||||| |||||||||||||||||    
T  16766683 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 16766741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 17341735 - 17341677
Alignment:
Q  125 cactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    ||||||||||  ||||||  |||| |||||| ||||||| |||||||||||||||||||    
T  17341735 cactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattata 17341677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 21142126 - 21142168
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||| ||||||||||||||||||||||||| || |||||||||    
T  21142126 taataatttgagaaaatcatataattcagtctagttatatgtg 21142168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 34595120 - 34595178
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    |||| |||||||  ||||| |||||| |||||| ||||||| |||||||||||||||||    
T  34595120 gacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatta 34595178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 7151413 - 7151462
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||| |||||| ||||||| |||||| ||||||||||||||||    
T  7151413 acacctctaataatttgaaaaaatcacataattaagtgtaattatatgtg 7151462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 17411914 - 17411877
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  17411914 atttaagaaaatcatataattcagtataattatatgtg 17411877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 20518330 - 20518395
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||  | ||||||||||  |||||||||||| | |||| ||||| ||||||||||||    
T  20518330 agacactgacacactaacaccactaacaatttgagaaaattacataaatcagtataattatatgtg 20518395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 31579276 - 31579239
Alignment:
Q  145 taattatttgagaaaatcatataattcagtgtaattat 182  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaattat 31579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 34073399 - 34073358
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatg 185  Q
    ||||| |||||||||||||  |||||||||||||||||||||    
T  34073399 ctaataatttgagaaaatctcataattcagtgtaattatatg 34073358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 5462685 - 5462733
Alignment:
Q  136 tgacaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    |||||||  |||| |||||||||||||| |||||||| |||||||||||    
T  5462685 tgacaccgttaataatttgagaaaatcacataattcattgtaattatat 5462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 5626769 - 5626705
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||||  ||||| ||||||| ||| |||||||||  || |||||||||| ||||||||    
T  5626769 gacactgacacgccgacacaactaatttttttagaaaatcacttagttcagtgtaaatatatgtg 5626705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 187
Target Start/End: Original strand, 7248360 - 7248408
Alignment:
Q  139 caccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||||| || |||| |||||| ||||||||| |||||||||||||    
T  7248360 caccactaataatctgaggaaatcacataattcagggtaattatatgtg 7248408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 8805646 - 8805586
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattat 182  Q
    |||||| ||||||| | |||  ||||| |||||||||||||| |||||| |||||||||||    
T  8805646 agacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattat 8805586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 10339198 - 10339134
Alignment:
Q  124 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtg-taattatatgtg 187  Q
    |||||||||||  |||||| | | | |||||||||||||| ||||||||||| ||||||||||||    
T  10339198 acactgacacgccgacaccgcgattaatttgagaaaatcacataattcagtgttaattatatgtg 10339134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 15443682 - 15443742
Alignment:
Q  124 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    |||||||||||| |||| || |||| |||||||||||| | |||||||| | |||||||||    
T  15443682 acactgacacgtcgacatcaataataatttgagaaaataacataattcaatataattatat 15443742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 17302333 - 17302397
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||||||  | ||||| |||||| |||| ||||||||| ||||||  |||||||||||||||    
T  17302333 gacactgacatatggacacaactaataatttaagaaaatcacataattttgtgtaattatatgtg 17302397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 17841662 - 17841594
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacgg 191  Q
    ||||||||||||  |||||  ||||| |||||| ||||||| |||||| |||||||||| | |||||||    
T  17841662 gacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacgg 17841594  T

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Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 20371183 - 20371119
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||| |||||||  |||||| ||||| |||||||||||||| |||| ||| ||| ||||||||||    
T  20371183 gacattgacacgccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtg 20371119  T

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Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 26575409 - 26575357
Alignment:
Q  118 atatagacactgacacgttgacaccactaattatttgagaaaatcatataatt 170  Q
    ||||||| |||||||||| |||||||||||| |||  | ||||||||||||||    
T  26575409 atatagatactgacacgtcgacaccactaataattgaaaaaaatcatataatt 26575357  T

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Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 33419159 - 33419223
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||| ||| || || ||||||||| |||||| ||| | |||||||||| ||||||||||||||    
T  33419159 gacactaacatgtcgaaaccactaataatttgaaaaattgatataattcaatgtaattatatgtg 33419223  T

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Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 90844 - 90890
Alignment:
Q  138 acaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||    
T  90844 acaccattaataatttgagaaaatcatataattcagtgtaattatat 90890  T

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Target: scaffold0085 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 26378 - 26443
Alignment:
Q  122 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| |||||||| |||||||||||| |||||||||||||| |||||||| |||  |||||||||    
T  26378 agacagtgacacgtcgacaccactaataatttgagaaaatcacataattcaatgtcgttatatgtg 26443  T

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Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 44585 - 44534
Alignment:
Q  136 tgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||||| ||||  |||||||||||||| |||||||||||||||||||||||    
T  44585 tgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtg 44534  T

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Target: scaffold0306 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 13386 - 13444
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||  ||||| |||||| |||||||||||||| ||||||||||| |||||    
T  13386 gacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaatta 13444  T

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Target: scaffold0152 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 21941 - 21883
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||  ||||| |||||| |||||||||||||| ||||||||||| |||||    
T  21941 gacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaatta 21883  T

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Target: scaffold0036 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 9802 - 9756
Alignment:
Q  141 ccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||    
T  9802 ccactaataatttgagaaaatcacttaattcagtgtaattatatgtg 9756  T

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Target: scaffold0361 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 14499 - 14574
Alignment:
Q  107 atgaagcacggatatagacactg-acacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||||  ||||| | |||||  ||||| |||||| |||||| ||||||| |||||||||||||||||    
T  14499 atgaagcacggatacggacaccggacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatta 14574  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 135364 - 135321
Alignment:
Q  144 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| |||||||||||||| ||||||| |||||||||||||||    
T  135364 ctaataatttgagaaaatcacataattctgtgtaattatatgtg 135321  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 178892 - 178833
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcat-ataattcagtgtaatta 181  Q
    ||||||||||||  ||||| |||||| |||||| |||||||| |||||||||||||||||    
T  178892 gacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaatta 178833  T

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Target: scaffold0103 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 51797 - 51855
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||||||||||  |||||  ||||| |||||| ||||||| |||||||||||||||||    
T  51797 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

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Target: scaffold0227 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 7401 - 7324
Alignment:
Q  107 atgaagcacggatatagacactg-acacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    |||||||||||||| |||||| | |||||  ||||| |||||| |||||  ||||||| |||||| ||||||||||||    
T  7401 atgaagcacggatacagacaccggacacgccgacacaactaataatttggaaaaatcacataatttagtgtaattata 7324  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 183
Target Start/End: Original strand, 53193 - 53226
Alignment:
Q  150 atttgagaaaatcatataattcagtgtaattata 183  Q
    |||||||||||||| |||||||||||||||||||    
T  53193 atttgagaaaatcacataattcagtgtaattata 53226  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 240094 - 240021
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 196  Q
    ||||| |||| ||||||| |  |||| |||||||||||| |||||||||| |||||| ||||||| ||| ||||    
T  240094 gacacggacatgttgacaactataataatttgagaaaataatataattcaatgtaatcatatgtgtcggtgtca 240021  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 8010 - 8054
Alignment:
Q  137 gacaccactaattatttgagaaaatcatataattcagtgtaatta 181  Q
    ||||| |||||| |||||| ||||||||||||| |||||||||||    
T  8010 gacacaactaataatttgaaaaaatcatataatacagtgtaatta 8054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 9884 - 9948
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 187  Q
    ||||| ||||||  |||||  |||||| ||| ||||||||||| ||| |||||||||||||||||    
T  9884 gacaccgacacgccgacacagctaatttttttagaaaatcataaaatgcagtgtaattatatgtg 9948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 85045 - 84985
Alignment:
Q  124 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 184  Q
    |||| ||||||  |||||||||| | |||| ||||||||||||||||  ||||||||||||    
T  85045 acacggacacgccgacaccactactaatttaagaaaatcatataattatgtgtaattatat 84985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 263445 - 263385
Alignment:
Q  123 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 183  Q
    |||||||||| ||  ||||  ||||| ||||||||||| || |||||||||||||||||||    
T  263445 gacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattata 263385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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