View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14231_low_13 (Length: 533)

Name: NF14231_low_13
Description: NF14231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14231_low_13
NF14231_low_13
[»] chr1 (42 HSPs)
chr1 (243-507)||(11688449-11688711)
chr1 (191-507)||(11691611-11691927)
chr1 (48-161)||(28455898-28456011)
chr1 (46-211)||(11688285-11688452)
chr1 (48-161)||(32007098-32007211)
chr1 (48-161)||(39276374-39276487)
chr1 (48-161)||(41761402-41761515)
chr1 (46-161)||(45813002-45813117)
chr1 (48-161)||(5055779-5055892)
chr1 (48-161)||(41808226-41808339)
chr1 (48-161)||(48660046-48660159)
chr1 (46-161)||(192437-192552)
chr1 (48-161)||(29994374-29994487)
chr1 (48-152)||(20772-20876)
chr1 (49-161)||(35945822-35945934)
chr1 (80-161)||(41039294-41039375)
chr1 (46-161)||(5943703-5943818)
chr1 (59-161)||(50106187-50106289)
chr1 (45-152)||(7059488-7059595)
chr1 (48-161)||(46447364-46447481)
chr1 (46-160)||(26032820-26032937)
chr1 (46-154)||(4065983-4066091)
chr1 (57-161)||(13109803-13109907)
chr1 (48-149)||(7275705-7275806)
chr1 (79-152)||(35110099-35110172)
chr1 (48-116)||(29587276-29587344)
chr1 (48-152)||(49783731-49783835)
chr1 (86-161)||(3716424-3716499)
chr1 (49-151)||(21938967-21939069)
chr1 (59-152)||(13097339-13097432)
chr1 (87-151)||(26264537-26264601)
chr1 (85-152)||(778635-778702)
chr1 (46-161)||(38817190-38817305)
chr1 (56-155)||(39284322-39284421)
chr1 (106-149)||(13183179-13183222)
chr1 (83-149)||(2088908-2088974)
chr1 (97-155)||(9886889-9886947)
chr1 (108-162)||(25931147-25931201)
chr1 (49-151)||(32982351-32982453)
chr1 (48-114)||(35224364-35224430)
chr1 (98-131)||(16770177-16770210)
chr1 (46-95)||(47111479-47111528)
[»] chr8 (40 HSPs)
chr8 (48-161)||(32333138-32333251)
chr8 (48-161)||(28817280-28817393)
chr8 (48-161)||(35779488-35779601)
chr8 (48-161)||(1331-1444)
chr8 (48-160)||(6602510-6602622)
chr8 (48-160)||(6677963-6678075)
chr8 (48-161)||(42885198-42885311)
chr8 (49-161)||(1078639-1078751)
chr8 (48-161)||(7792685-7792798)
chr8 (48-161)||(7813346-7813459)
chr8 (48-161)||(42192630-42192743)
chr8 (48-161)||(70514-70627)
chr8 (48-161)||(4530973-4531086)
chr8 (48-161)||(10963233-10963344)
chr8 (55-149)||(31532128-31532222)
chr8 (48-152)||(39303333-39303438)
chr8 (48-160)||(40911245-40911356)
chr8 (48-155)||(5385362-5385469)
chr8 (48-151)||(9292042-9292145)
chr8 (48-161)||(3822420-3822533)
chr8 (48-161)||(12534711-12534822)
chr8 (48-152)||(31969720-31969824)
chr8 (48-152)||(45264640-45264743)
chr8 (48-161)||(6099596-6099709)
chr8 (48-161)||(39435306-39435419)
chr8 (83-161)||(13891149-13891227)
chr8 (48-161)||(41849223-41849335)
chr8 (46-124)||(18386730-18386808)
chr8 (46-151)||(18752363-18752468)
chr8 (48-152)||(29425381-29425479)
chr8 (101-161)||(20269607-20269667)
chr8 (101-161)||(21056236-21056296)
chr8 (65-161)||(33731455-33731551)
chr8 (48-151)||(7403696-7403798)
chr8 (87-161)||(31695260-31695334)
chr8 (84-161)||(9775033-9775110)
chr8 (46-149)||(40932731-40932834)
chr8 (46-104)||(22203722-22203780)
chr8 (48-161)||(42364694-42364805)
chr8 (90-161)||(14400781-14400852)
[»] chr4 (54 HSPs)
chr4 (46-161)||(45874077-45874192)
chr4 (48-161)||(34739304-34739417)
chr4 (48-161)||(23417474-23417587)
chr4 (48-161)||(28798379-28798492)
chr4 (48-161)||(43139897-43140010)
chr4 (46-161)||(12735453-12735568)
chr4 (48-161)||(1173975-1174088)
chr4 (48-161)||(19849494-19849607)
chr4 (48-161)||(26424849-26424961)
chr4 (48-161)||(53457848-53457961)
chr4 (48-161)||(54768423-54768536)
chr4 (48-151)||(55214676-55214779)
chr4 (48-161)||(12867865-12867978)
chr4 (48-161)||(18257353-18257466)
chr4 (51-161)||(29581035-29581144)
chr4 (48-153)||(238457-238562)
chr4 (46-161)||(22608007-22608122)
chr4 (49-152)||(55400253-55400356)
chr4 (49-143)||(39807869-39807963)
chr4 (48-161)||(19225283-19225396)
chr4 (56-161)||(19673920-19674025)
chr4 (48-161)||(11278006-11278115)
chr4 (49-148)||(23710337-23710436)
chr4 (48-162)||(2864738-2864852)
chr4 (48-161)||(50033405-50033519)
chr4 (48-161)||(19814129-19814242)
chr4 (56-161)||(24417869-24417974)
chr4 (46-163)||(24517972-24518089)
chr4 (84-165)||(33770628-33770708)
chr4 (48-137)||(49030754-49030842)
chr4 (85-161)||(1966611-1966687)
chr4 (46-139)||(32778147-32778238)
chr4 (48-142)||(37134072-37134166)
chr4 (46-161)||(51287623-51287739)
chr4 (57-151)||(516457-516551)
chr4 (46-151)||(2804544-2804647)
chr4 (49-151)||(12767112-12767214)
chr4 (46-140)||(22910269-22910363)
chr4 (46-140)||(22968159-22968253)
chr4 (99-161)||(31015057-31015119)
chr4 (99-161)||(52171981-52172043)
chr4 (84-161)||(37620677-37620753)
chr4 (48-161)||(52768292-52768404)
chr4 (109-161)||(50347320-50347372)
chr4 (55-114)||(3465783-3465842)
chr4 (84-161)||(2075565-2075642)
chr4 (48-117)||(32441119-32441188)
chr4 (106-149)||(23532129-23532172)
chr4 (99-161)||(16555382-16555444)
chr4 (101-151)||(48822890-48822940)
chr4 (90-151)||(1125953-1126014)
chr4 (46-75)||(16342826-16342855)
chr4 (46-122)||(16887581-16887657)
chr4 (109-153)||(19119214-19119258)
[»] scaffold0032 (1 HSPs)
scaffold0032 (48-161)||(56505-56618)
[»] chr2 (44 HSPs)
chr2 (48-161)||(26605648-26605761)
chr2 (46-161)||(34460391-34460506)
chr2 (48-161)||(10639597-10639710)
chr2 (48-161)||(37197601-37197714)
chr2 (48-163)||(19537331-19537446)
chr2 (48-161)||(33083545-33083658)
chr2 (48-161)||(11708702-11708815)
chr2 (48-161)||(23839883-23839996)
chr2 (48-161)||(11459739-11459852)
chr2 (48-161)||(45125156-45125269)
chr2 (48-163)||(29659207-29659322)
chr2 (48-162)||(19816244-19816358)
chr2 (48-165)||(11816538-11816655)
chr2 (48-161)||(19048778-19048891)
chr2 (48-161)||(39535525-39535638)
chr2 (46-152)||(38440197-38440303)
chr2 (52-155)||(4851348-4851451)
chr2 (46-152)||(43778468-43778574)
chr2 (48-161)||(39831435-39831547)
chr2 (49-161)||(7275877-7275989)
chr2 (46-150)||(15782612-15782715)
chr2 (46-161)||(27137909-27138023)
chr2 (49-149)||(16654388-16654488)
chr2 (48-155)||(34234554-34234659)
chr2 (46-149)||(40786212-40786315)
chr2 (46-149)||(43684091-43684194)
chr2 (99-152)||(42578243-42578296)
chr2 (48-149)||(7349122-7349223)
chr2 (46-152)||(44181887-44181993)
chr2 (48-149)||(4800900-4801001)
chr2 (46-161)||(42025692-42025808)
chr2 (79-149)||(40825161-40825231)
chr2 (48-152)||(21312229-21312331)
chr2 (84-161)||(33001762-33001839)
chr2 (101-151)||(15344966-15345016)
chr2 (46-166)||(6054991-6055111)
chr2 (49-161)||(33564900-33565010)
chr2 (49-122)||(38400494-38400567)
chr2 (46-136)||(15072115-15072204)
chr2 (85-150)||(20497592-20497657)
chr2 (48-161)||(34239811-34239924)
chr2 (48-96)||(25501839-25501887)
chr2 (46-149)||(34093259-34093363)
chr2 (106-161)||(41780417-41780473)
[»] chr7 (51 HSPs)
chr7 (49-161)||(2146661-2146773)
chr7 (48-166)||(23358209-23358327)
chr7 (48-161)||(4106762-4106875)
chr7 (48-161)||(40058262-40058375)
chr7 (48-161)||(44083964-44084077)
chr7 (48-161)||(4107333-4107446)
chr7 (48-161)||(31770523-31770636)
chr7 (53-166)||(47570704-47570817)
chr7 (48-161)||(47250242-47250355)
chr7 (49-161)||(25546266-25546378)
chr7 (48-161)||(8439102-8439215)
chr7 (48-161)||(25112238-25112351)
chr7 (56-161)||(38781199-38781304)
chr7 (48-161)||(7162781-7162892)
chr7 (48-154)||(41183839-41183945)
chr7 (49-161)||(48146778-48146890)
chr7 (48-153)||(5772818-5772923)
chr7 (47-152)||(11355846-11355951)
chr7 (46-145)||(27229484-27229584)
chr7 (48-151)||(43753754-43753858)
chr7 (48-161)||(28603035-28603148)
chr7 (48-153)||(38033753-38033858)
chr7 (48-160)||(43203330-43203442)
chr7 (46-161)||(5587302-5587417)
chr7 (46-161)||(5592263-5592378)
chr7 (46-161)||(32606321-32606436)
chr7 (55-161)||(39513974-39514080)
chr7 (49-161)||(47557806-47557918)
chr7 (48-163)||(15634868-15634983)
chr7 (48-161)||(29484746-29484859)
chr7 (46-152)||(43170939-43171045)
chr7 (106-155)||(19630665-19630714)
chr7 (49-164)||(27915568-27915684)
chr7 (49-161)||(4001835-4001945)
chr7 (49-161)||(48444143-48444255)
chr7 (57-163)||(5462939-5463045)
chr7 (48-152)||(42081619-42081720)
chr7 (48-137)||(13887195-13887282)
chr7 (92-142)||(34763510-34763560)
chr7 (79-161)||(35577867-35577949)
chr7 (86-152)||(40657591-40657657)
chr7 (84-161)||(10220464-10220540)
chr7 (48-153)||(25872787-25872892)
chr7 (56-152)||(35309886-35309982)
chr7 (101-152)||(31288224-31288275)
chr7 (86-147)||(18506281-18506341)
chr7 (46-156)||(40642996-40643099)
chr7 (48-128)||(47960979-47961059)
chr7 (86-148)||(10626451-10626513)
chr7 (113-149)||(23036208-23036244)
chr7 (49-145)||(25049965-25050061)
[»] scaffold1348 (1 HSPs)
scaffold1348 (48-161)||(853-966)
[»] scaffold0119 (2 HSPs)
scaffold0119 (48-161)||(13942-14055)
scaffold0119 (48-161)||(19622-19735)
[»] chr5 (31 HSPs)
chr5 (48-161)||(13203981-13204094)
chr5 (48-161)||(21018247-21018360)
chr5 (48-161)||(4824930-4825043)
chr5 (48-161)||(35317688-35317801)
chr5 (51-161)||(31909376-31909486)
chr5 (48-161)||(12257380-12257493)
chr5 (49-152)||(2971009-2971112)
chr5 (49-155)||(29265900-29266006)
chr5 (48-149)||(6021016-6021117)
chr5 (46-149)||(40177646-40177749)
chr5 (48-149)||(1191543-1191644)
chr5 (46-155)||(21112071-21112180)
chr5 (92-161)||(32143405-32143474)
chr5 (49-143)||(27721456-27721550)
chr5 (48-161)||(8734020-8734134)
chr5 (46-152)||(14270546-14270652)
chr5 (49-152)||(23262573-23262672)
chr5 (56-161)||(28591341-28591446)
chr5 (48-151)||(3386894-3387004)
chr5 (83-163)||(17984731-17984811)
chr5 (46-152)||(35545955-35546061)
chr5 (48-152)||(2786295-2786398)
chr5 (48-161)||(11124676-11124789)
chr5 (49-146)||(2755950-2756047)
chr5 (48-128)||(9576985-9577065)
chr5 (117-161)||(17465170-17465214)
chr5 (85-149)||(41580078-41580142)
chr5 (106-161)||(19181793-19181847)
chr5 (111-161)||(4925673-4925723)
chr5 (47-112)||(3049094-3049159)
chr5 (49-90)||(30127919-30127960)
[»] chr3 (36 HSPs)
chr3 (48-161)||(7824445-7824558)
chr3 (48-161)||(43247641-43247754)
chr3 (48-163)||(29689471-29689586)
chr3 (48-161)||(54151672-54151785)
chr3 (46-161)||(28844526-28844642)
chr3 (48-161)||(3112986-3113099)
chr3 (48-161)||(9349667-9349780)
chr3 (48-161)||(36228985-36229098)
chr3 (48-161)||(51665916-51666029)
chr3 (48-153)||(54158290-54158395)
chr3 (48-161)||(4601449-4601562)
chr3 (48-146)||(55018040-55018138)
chr3 (48-161)||(52500862-52500975)
chr3 (46-150)||(1778873-1778977)
chr3 (48-161)||(42392796-42392909)
chr3 (48-151)||(35461480-35461583)
chr3 (48-161)||(33334632-33334745)
chr3 (48-153)||(29750645-29750749)
chr3 (55-151)||(38257304-38257400)
chr3 (82-161)||(7958627-7958706)
chr3 (98-161)||(55320391-55320454)
chr3 (48-161)||(41377608-41377716)
chr3 (49-161)||(475272-475383)
chr3 (49-161)||(32001415-32001527)
chr3 (48-152)||(43775247-43775351)
chr3 (49-151)||(40756728-40756831)
chr3 (58-152)||(47635005-47635099)
chr3 (49-147)||(8151373-8151471)
chr3 (46-152)||(50729546-50729652)
chr3 (46-152)||(50783197-50783303)
chr3 (46-152)||(51054723-51054829)
chr3 (46-143)||(448884-448981)
chr3 (115-161)||(2590801-2590847)
chr3 (48-149)||(53182757-53182858)
chr3 (49-152)||(27230692-27230794)
chr3 (47-152)||(8137633-8137736)
[»] scaffold0044 (1 HSPs)
scaffold0044 (48-160)||(9965-10077)
[»] chr6 (23 HSPs)
chr6 (48-161)||(33704240-33704353)
chr6 (48-161)||(33621518-33621631)
chr6 (48-161)||(21037315-21037427)
chr6 (46-161)||(4464149-4464264)
chr6 (48-161)||(28322956-28323069)
chr6 (48-161)||(2959173-2959286)
chr6 (49-161)||(16518448-16518558)
chr6 (48-161)||(19145495-19145607)
chr6 (48-161)||(21000716-21000829)
chr6 (44-161)||(29009641-29009758)
chr6 (92-161)||(35218631-35218700)
chr6 (46-152)||(24619079-24619185)
chr6 (48-161)||(361035-361148)
chr6 (48-152)||(32289370-32289473)
chr6 (47-126)||(11572031-11572110)
chr6 (46-151)||(12252045-12252150)
chr6 (92-161)||(28592119-28592188)
chr6 (48-160)||(584776-584887)
chr6 (46-161)||(32353932-32354046)
chr6 (46-144)||(10999416-10999514)
chr6 (82-149)||(7014313-7014380)
chr6 (98-152)||(11456047-11456101)
chr6 (87-161)||(22576244-22576318)
[»] scaffold0053 (1 HSPs)
scaffold0053 (46-152)||(22185-22291)
[»] scaffold0038 (1 HSPs)
scaffold0038 (48-161)||(114276-114389)
[»] scaffold0067 (1 HSPs)
scaffold0067 (48-161)||(34842-34956)
[»] scaffold0352 (1 HSPs)
scaffold0352 (49-161)||(8934-9046)
[»] scaffold0360 (1 HSPs)
scaffold0360 (46-151)||(14517-14632)
[»] scaffold0631 (1 HSPs)
scaffold0631 (119-161)||(4413-4455)
[»] scaffold0079 (1 HSPs)
scaffold0079 (46-75)||(50006-50035)


Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-124; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 243 - 507
Target Start/End: Original strand, 11688449 - 11688711
Alignment:
Q  243 caaccgtaaatgaaaagcttcattggaatataaaaagaaaataaaatattaatgagggtatatgttataaacaagagaaaatgatcagcacttaccttga 342  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11688449 caaccgtacatgaaaagcttcattagaatataaaaagaaaataaaatattaatgagggtatatgttataagcaagagaaaatgatcagcacttaccttga 11688548  T
Q  343 gaaacaaagatttaagaaaataaaatgttaatgaaggtataatgtcgttgtgttgaggagcatgaagacacggagagagaaagaatgtacatgtcctcaa 442  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  11688549 taaacaaagatttaagaaaataaaatgttaatgaaggtataatgtcgttgtgttgaggagcatgaagacacggagagagaaagaatgtacatgtcctca- 11688647  T
Q  443 tatgccagtgcaacacttttacactgccaacccaactatttgaagtaagtatcgtgagctccaag 507  Q
     |||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||    
T  11688648 -atgccagtgcaacacttttacattgccaacccaactatttgaactcagtatcgtgagctccaag 11688711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 191 - 507
Target Start/End: Original strand, 11691611 - 11691927
Alignment:
Q  191 tttttcattctattatacaacacaagaccttgaatcatcaaacattaacaaccaaccgtaaatgaaaagcttcattggaatataaaaagaaaataaaata 290  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  11691611 ttttttattctattatacaacacaacaccatgaatcatcaaacattaacaacgaaccgtacatgaaaagcttcattagaatataaaaagaaaataaaata 11691710  T
Q  291 ttaatgagggtatat---gttataaacaagagaaaatgatcagcacttaccttga-gaaacaaagatttaagaaaataaaatgttaatgaaggtataatg 386  Q
    ||||||| | |||||   || |||| ||||||||||| ||||||||| ||||| |  |||||||||||||||||| |   || |||  | | ||| ||||    
T  11691711 ttaatgaagttatatatagtaataagcaagagaaaataatcagcactgaccttaataaaacaaagatttaagaaagt--gatatta--gcaagtacaatg 11691806  T
Q  387 tcgttgtgttgaggagcatgaagacacggagagagaaagaatgtacatgtcctca--atatgccagtgcaacacttttacactgccaacccaactatttg 484  Q
    | ||||||||||||| ||||||||||||||||||||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||| ||||||    
T  11691807 ttgttgtgttgaggaacatgaagacacggagagagaaagaatgt--atgtcctcaatatatgccagtgcaacacttttacactgccaacccaaatatttg 11691904  T
Q  485 aagtaagtatcgtgagctccaag 507  Q
    || ||||||||||||||||||||    
T  11691905 aactaagtatcgtgagctccaag 11691927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 28455898 - 28456011
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28455898 caaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 28455997  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  28455998 aagaccaaaaaaaa 28456011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 11688285 - 11688452
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||  |||||||||||| ||| |||||| ||||| ||||||||  |  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11688285 gacaaatatcgaaattgcaagcccgaacgttgtgaccctggttcgaattcaggacttcagagttgtgtgtgagtttattttcagtggattaccacttcat 11688384  T
Q  146 ctaagacc--aacaaaaatataagaaagaagaaaaaagactaagagatttttcattctattatacaac 211  Q
    | ||||||  || ||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  11688385 ccaagaccaaaaaaaaaatataagaaagaagaaaaaagactaaaggatttttcattctattatacaac 11688452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 32007098 - 32007211
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32007098 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 32007197  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  32007198 aagaccaaaaaaaa 32007211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 39276374 - 39276487
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| |    
T  39276374 caaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttatgtgtgagtttattttcagtggattaccacttcattt 39276473  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  39276474 aagaccaaaaaaaa 39276487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 41761515 - 41761402
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||     
T  41761515 caaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatcc 41761416  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  41761415 aagaccaaaaaaaa 41761402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 46 - 161
Target Start/End: Complemental strand, 45813117 - 45813002
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||||||||||||||||| ||||| | | |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45813117 gacaaatgccgaaattgcaaggtcggacatcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcat 45813018  T
Q  146 ctaagaccaacaaaaa 161  Q
    |||||||||| |||||    
T  45813017 ctaagaccaaaaaaaa 45813002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 5055892 - 5055779
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5055892 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 5055793  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  5055792 aagacaaaaaaaaa 5055779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 41808226 - 41808339
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41808226 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 41808325  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  41808326 aagaccaaaaaaaa 41808339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 48660046 - 48660159
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||    
T  48660046 caaatgccgaaattgcaaggccggacgttatgacccgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 48660145  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  48660146 aagacaaaaaaaaa 48660159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 46 - 161
Target Start/End: Original strand, 192437 - 192552
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||||  ||||||||||||||||||||| || ||| ||||||||||  ||||||| |||||||||||||||||||||||| |||||||||||||||    
T  192437 gacaaatgctaaaattgcaaggccggacgttgtgatccgtgttcgaacccaggacctcacagttgtgtgtgagtttattttcagcggattaccacttcat 192536  T
Q  146 ctaagaccaacaaaaa 161  Q
    |||||||||| |||||    
T  192537 ctaagaccaaaaaaaa 192552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 29994487 - 29994374
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||| |||||   || ||||||||||||||||||||||| | ||||||||||||||| ||||||||| ||||||||||||||    
T  29994487 caaatgccgaaattgcaaggccagacgtcatgatccgggttcgaacccgagacctcacaattgtgtgtgagtttaatttcagtggtttaccacttcatct 29994388  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  29994387 aagaccaaaaaaaa 29994374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 20772 - 20876
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||| |||||  | ||||||| |||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  20772 caaatgccgaaattgcaaggcaggacgccgtgacccggattcgaacccgggacctcacagttgtgtgtgagtttatttttagtggattaccacttcatct 20871  T
Q  148 aagac 152  Q
    |||||    
T  20872 aagac 20876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 35945822 - 35945934
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    |||||||||||||| ||||| |||||||| |||| |||||||||||||  |||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  35945822 aaatgccgaaattgtaaggctggacgttgtgacctgggttcgaacccggaacctcacagttgtgtgtgaatttattttcagtggattaccacttcatcta 35945921  T
Q  149 agaccaacaaaaa 161  Q
    ||| ||| |||||    
T  35945922 agatcaaaaaaaa 35945934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 41039375 - 41039294
Alignment:
Q  80 acccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41039375 acccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaaaaaaaa 41039294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 46 - 161
Target Start/End: Original strand, 5943703 - 5943818
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||| |  ||||||| |||||| |||||||||| ||||| ||||||| ||||||||    
T  5943703 gacaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaactcaggacctcacagttgtttgtgagtttaatttcaatggattatcacttcat 5943802  T
Q  146 ctaagaccaacaaaaa 161  Q
    ||||||| || |||||    
T  5943803 ctaagacaaaaaaaaa 5943818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 50106289 - 50106187
Alignment:
Q  59 attgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaa 158  Q
    |||||||||||| |||||| |||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||| |||||||| ||| || ||    
T  50106289 attgcaaggccgaacgttgtgacccgggttcgaacccgggacctcacagttatgtgtgagtttattttcagtggattgccatttcatctatgacaaataa 50106190  T
Q  159 aaa 161  Q
    |||    
T  50106189 aaa 50106187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 45 - 152
Target Start/End: Original strand, 7059488 - 7059595
Alignment:
Q  45 ggacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttca 144  Q
    ||||||||| | ||||||||||| | ||||| | |||||||||||||| | ||||||||| ||||||||||||||||| ||| ||||||||||||||| |    
T  7059488 ggacaaatgtcaaaattgcaaggtcagacgtcgtgacccgggttcgaatctgagacctcacagttgtgtgtgagtttaatttaagtggattaccacttta 7059587  T
Q  145 tctaagac 152  Q
    ||||||||    
T  7059588 tctaagac 7059595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 46447481 - 46447364
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagt----ttattttcagtggattaccacttc 143  Q
    |||||||||||||||||||||  ||||| |  ||||||||||||||||| ||||||| |||| |||||||||    ||||||||||||||||||||| ||    
T  46447481 caaatgccgaaattgcaaggctcgacgtcgtaacccgggttcgaacccgggacctcacagttatgtgtgagtttaattattttcagtggattaccacatc 46447382  T
Q  144 atctaagaccaacaaaaa 161  Q
    ||||||||| || |||||    
T  46447381 atctaagacaaaaaaaaa 46447364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 26032820 - 26032937
Alignment:
Q  46 gacaaatgccgaaattgcaaggccgg---acgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccactt 142  Q
    ||||||||||||||||| |||| |||   |||| | |||||||||||||||| |  |||||| |||| |||||||||||| ||||||||||||||| |||    
T  26032820 gacaaatgccgaaattgtaaggtcggcggacgtcgtgacccgggttcgaacctggaacctcacagttttgtgtgagtttaatttcagtggattaccgctt 26032919  T
Q  143 catctaagaccaacaaaa 160  Q
    ||||||||||||| ||||    
T  26032920 catctaagaccaaaaaaa 26032937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 46 - 154
Target Start/End: Original strand, 4065983 - 4066091
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    ||||||| ||||||||||||| | | |||||| || ||||||||||| | ||||||| | | |||| |||||||||| |||||||| |||||||||||||    
T  4065983 gacaaataccgaaattgcaagactgaacgttgtgatccgggttcgaatctgagaccttacaattgtatgtgagtttaatttcagtgaattaccacttcat 4066082  T
Q  146 ctaagacca 154  Q
    |||||||||    
T  4066083 ctaagacca 4066091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 57 - 161
Target Start/End: Original strand, 13109803 - 13109907
Alignment:
Q  57 aaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaac 156  Q
    ||||||||||| ||||||| |  |||||  ||||||||    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||     
T  13109803 aaattgcaaggtcggacgtcgtaacccgaattcgaacctagaacctcacagttgtgtgtgagtttaatttcagtggattaccacttcatctaagacaaaa 13109902  T
Q  157 aaaaa 161  Q
    |||||    
T  13109903 aaaaa 13109907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 7275705 - 7275806
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||| |||||||| |||| ||||||||  ||| ||| ||||||||||  || ||| |||||||| |||||||| ||||||||| ||||||||||||||    
T  7275705 caaatgtcgaaattgtaaggtcggacgttatgactcggattcgaacccggaacttcacagttgtgtatgagtttaatttcagtggtttaccacttcatct 7275804  T
Q  148 aa 149  Q
    ||    
T  7275805 aa 7275806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 35110172 - 35110099
Alignment:
Q  79 gacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 152  Q
    |||||||||||||||||  ||||| | ||||||||||||||||| ||| || ||||||||||||||||||||||    
T  35110172 gacccgggttcgaacccaggaccttacagttgtgtgtgagtttaatttgagaggattaccacttcatctaagac 35110099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 29587276 - 29587344
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtg 116  Q
    |||||||||||||||||||||||||||| | |||| ||||||||||||| ||||||| | |||||||||    
T  29587276 caaatgccgaaattgcaaggccggacgtcgtgacctgggttcgaacccgggacctcacaattgtgtgtg 29587344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 49783731 - 49783835
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||| ||||||||||||| || ||||   ||  ||||||||||||||  |||||| |||||| ||||| |||| ||||||||| ||||||||||||||    
T  49783731 caaatgtcgaaattgcaaggtcgaacgtcatgattcgggttcgaacccggaacctcacagttgtatgtgaatttaatttcagtggtttaccacttcatct 49783830  T
Q  148 aagac 152  Q
    |||||    
T  49783831 aagac 49783835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 3716424 - 3716499
Alignment:
Q  86 gttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    ||||||||| ||||||||| ||||||||||||||||||||| ||||||||  |||||||||| |||| || |||||    
T  3716424 gttcgaacctgagacctcacagttgtgtgtgagtttatttttagtggattgtcacttcatcttagacaaaaaaaaa 3716499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 49 - 151
Target Start/End: Original strand, 21938967 - 21939069
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    |||||||||||||| ||||||||| ||   || |||| |||||| ||  ||||||| ||||||||| ||||||| |||||| || |||||||||||||||    
T  21938967 aaatgccgaaattgtaaggccggatgtcatgatccggattcgaatccaggacctcacagttgtgtgcgagtttaatttcagcggtttaccacttcatcta 21939066  T
Q  149 aga 151  Q
    |||    
T  21939067 aga 21939069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 13097339 - 13097432
Alignment:
Q  59 attgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 152  Q
    ||||||||| ||||||| | ||||||| ||| ||||    |||||| |||||| |||||||||| ||| | |||||||||||||||||||||||    
T  13097339 attgcaaggtcggacgtcgtgacccggattcaaacctagaacctcacagttgtatgtgagtttaattttattggattaccacttcatctaagac 13097432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 26264601 - 26264537
Alignment:
Q  87 ttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 151  Q
    |||||||| || |||||| ||||||||||||||||| ||||| || |||| ||||||||||||||    
T  26264601 ttcgaacctgaaacctcacagttgtgtgtgagtttaatttcaatgtattatcacttcatctaaga 26264537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 778635 - 778702
Alignment:
Q  85 ggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 152  Q
    ||||||||||   ||||| | ||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  778635 ggttcgaacctaggacctgacagttgtgtgtgagtttaatttcagtgaattaccaattcatctaagac 778702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 46 - 161
Target Start/End: Complemental strand, 38817305 - 38817190
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||| ||| |||| ||| |||||||| | || ||| ||||||||||||||||||| | |||||||||| |||| ||| | | | |||||| || ||    
T  38817305 gacaaatgtcgatattgaaagaccggacgtcgtgatccgagttcgaacccgagacctcacaattgtgtgtgaatttaattttaattgtttaccattttat 38817206  T
Q  146 ctaagaccaacaaaaa 161  Q
    ||||||| || |||||    
T  38817205 ctaagacaaaaaaaaa 38817190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 56 - 155
Target Start/End: Original strand, 39284322 - 39284421
Alignment:
Q  56 gaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaa 155  Q
    ||||||| |||| ||||||| | ||  ||||||||||||  |||||||| |||||| |||||||||| |||  ||||||||| | ||||||||| |||||    
T  39284322 gaaattgtaaggtcggacgtcgtgattcgggttcgaacctaagacctcacagttgtatgtgagtttaatttttgtggattactatttcatctaaaaccaa 39284421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 149
Target Start/End: Complemental strand, 13183222 - 13183179
Alignment:
Q  106 agttgtgtgtgagtttattttcagtggattaccacttcatctaa 149  Q
    |||||| |||||||||| |||||||| |||||||||||||||||    
T  13183222 agttgtatgtgagtttaatttcagtgaattaccacttcatctaa 13183179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 2088974 - 2088908
Alignment:
Q  83 cgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaa 149  Q
    ||||||||||| |   |||||| | |||| |||||||| | ||||||||||||||||||||||||||    
T  2088974 cgggttcgaactcagaacctcacaattgtatgtgagttcaatttcagtggattaccacttcatctaa 2088908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 155
Target Start/End: Complemental strand, 9886947 - 9886889
Alignment:
Q  97 agacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaa 155  Q
    |||||| | |||| |||||||||||| | ||| || |||||||||||||||||||||||    
T  9886947 agacctaacagttatgtgtgagtttaatatcactgaattaccacttcatctaagaccaa 9886889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 25931201 - 25931147
Alignment:
Q  108 ttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaat 162  Q
    ||||||||||||||| ||||| | |||||||||||||||| |||| || ||||||    
T  25931201 ttgtgtgtgagtttaatttcaatagattaccacttcatctgagacaaaaaaaaat 25931147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 32982453 - 32982351
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    ||||||||||| || ||||||  || ||  ||||||  ||| |||| ||||  ||| ||||||||||||||||  ||||||||| |||| ||||||||||    
T  32982453 aaatgccgaaactgtaaggccaaactttatgacccgaattcaaacctgagaaatcacagttgtgtgtgagtttgatttcagtggtttactacttcatcta 32982354  T
Q  149 aga 151  Q
    |||    
T  32982353 aga 32982351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 35224364 - 35224430
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtg 114  Q
    |||||||  ||| |||||||||||||||   |||||||||||||||||  ||||||| |||||||||    
T  35224364 caaatgcgaaaaatgcaaggccggacgtcatgacccgggttcgaacccaggacctcacagttgtgtg 35224430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 131
Target Start/End: Complemental strand, 16770210 - 16770177
Alignment:
Q  98 gacctcagagttgtgtgtgagtttattttcagtg 131  Q
    ||||||| ||||||||||||||||||||||||||    
T  16770210 gacctcacagttgtgtgtgagtttattttcagtg 16770177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 47111479 - 47111528
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaaccc 95  Q
    |||||||||||||||||||||| ||||||| | |||| ||||| ||||||    
T  47111479 gacaaatgccgaaattgcaaggtcggacgtcgtgacctgggtttgaaccc 47111528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 5e-48; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 32333138 - 32333251
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32333138 caaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 32333237  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  32333238 aagaccaaaaaaaa 32333251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 28817280 - 28817393
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||    
T  28817280 caaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 28817379  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  28817380 aagaccaaaaaaaa 28817393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 35779601 - 35779488
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35779601 caaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 35779502  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  35779501 aagaccaaaaaaaa 35779488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 1444 - 1331
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||| ||||||||||||||||||||| ||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1444 caaatgccaaaattgcaaggccggacgttgtgaccctggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 1345  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  1344 aagaccaaaaaaaa 1331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 6602622 - 6602510
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6602622 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 6602523  T
Q  148 aagaccaacaaaa 160  Q
    |||||||| ||||    
T  6602522 aagaccaaaaaaa 6602510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 6678075 - 6677963
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6678075 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 6677976  T
Q  148 aagaccaacaaaa 160  Q
    |||||||| ||||    
T  6677975 aagaccaaaaaaa 6677963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 42885198 - 42885311
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||    
T  42885198 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 42885297  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  42885298 aagaccaaaaaaaa 42885311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 1078751 - 1078639
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    |||||||||||||||||||||||||||   ||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1078751 aaatgccgaaattgcaaggccggacgtcatgacccaggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatcta 1078652  T
Q  149 agaccaacaaaaa 161  Q
    ||||||| |||||    
T  1078651 agaccaaaaaaaa 1078639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 7792685 - 7792798
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||||| || |||| |||||||||||||||||||||||||||||||| |||||||||    
T  7792685 caaatgccgaaattgcaaggctggacgttgtgactcgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattactacttcatct 7792784  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  7792785 aagaccaaaaaaaa 7792798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 7813346 - 7813459
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||| ||||||||||||||||| |||| ||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7813346 caaatgctgaaattgcaaggccggatgttgtgactcgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 7813445  T
Q  148 aagaccaacaaaaa 161  Q
    || ||||| |||||    
T  7813446 aaaaccaaaaaaaa 7813459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 42192743 - 42192630
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||| ||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||    
T  42192743 caaatgccgaaattgcaaggccggacgtcatgacccgagttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 42192644  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  42192643 aagaccaaaaaaaa 42192630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 70627 - 70514
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||| |||||||   |||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  70627 caaatgccgaaattgcaaggtcggacgtcatgacccgggtttgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 70528  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  70527 aagacaaaaaaaaa 70514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 4531086 - 4530973
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||| ||||||   |||||||||||||||||| ||||||| || |||||||||||||| ||||||||| ||||||||||||||    
T  4531086 caaatgccgaaattgcaaggctggacgtcatgacccgggttcgaacccgggacctcacagctgtgtgtgagtttaatttcagtggtttaccacttcatct 4530987  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  4530986 aagaccaaaaaaaa 4530973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 10963344 - 10963233
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||| |||||||| |||||| || || |||||||||||| ||||||| |||||||||  |||||||||||||||||||||||||||||||    
T  10963344 caaatgccgaaattacaaggccgaacgttgtgatccaggttcgaacccgggacctcacagttgtgtg--agtttattttcagtggattaccacttcatct 10963247  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  10963246 aagaccaaaaaaaa 10963233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 31532222 - 31532128
Alignment:
Q  55 cgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaa 149  Q
    ||||||||||||||||||||||| ||||||| || ||||| | ||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  31532222 cgaaattgcaaggccggacgttgtgacccggatttgaaccggggacctcacagttgtgtgtgagtttaatttcagtggattaccacttcatctaa 31532128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 39303333 - 39303438
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgag-tttattttcagtggattaccacttcatc 146  Q
    ||||||||||||||||||||||||||||   |||  ||||| ||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||    
T  39303333 caaatgccgaaattgcaaggccggacgtcatgacatgggtttgaacccgagacctcacagttgtgtgtgagttttaatttcagtggattaccacttcatc 39303432  T
Q  147 taagac 152  Q
    ||||||    
T  39303433 taagac 39303438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 40911245 - 40911356
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||||||||| | |||||||||||||| ||| ||||||| |  |||||||||||||| ||||||||| ||||||||||||||    
T  40911245 caaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaa-ccgggacctcacaactgtgtgtgagtttaatttcagtggcttaccacttcatct 40911343  T
Q  148 aagaccaacaaaa 160  Q
    |||| ||| ||||    
T  40911344 aagatcaaaaaaa 40911356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 5385362 - 5385469
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||| |||||| | ||||| |||||||||||| ||||||| ||||||||||||||||| ||||||||  |||||||||||| |    
T  5385362 caaatgccgaaattgcaaggctggacgtcgtgacccaggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtgatttaccacttcattt 5385461  T
Q  148 aagaccaa 155  Q
    | ||||||    
T  5385462 atgaccaa 5385469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 9292042 - 9292145
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||| |||||||| || ||||||||||| ||||||  ||||||| || ||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  9292042 caaatgtcgaaattgtaaagccggacgttgtgacccgaattcgaactcgggacttcacagttgtgtgtgagtttattttcagtggattaccacttcatct 9292141  T
Q  148 aaga 151  Q
    ||||    
T  9292142 aaga 9292145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 3822420 - 3822533
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||||||  || |||| ||||||||||||||||| ||| |||| ||||||||||| |||    
T  3822420 caaatgccgaaattgtaaggtcggacgttgtgacccgggttcgaacccaggatctcacagttgtgtgtgagtttaattttagtgaattaccacttcttct 3822519  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  3822520 aagacaaaaaaaaa 3822533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 12534822 - 12534711
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||  || |||| ||||| |||  |||||||||||||| ||||||||||||||||    
T  12534822 caaatgccgaaattgcaaggccggacgtcgtgatccgggttcgaacccaggatctcacagttgcgtg--agtttattttcagtagattaccacttcatct 12534725  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  12534724 aagacaaaaaaaaa 12534711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 31969824 - 31969720
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||| ||||||| |||||   || |||||||||||| || ||||||| |||||||||||| |||| ||||||||| ||||||||||||||    
T  31969824 caaatgccgaaatttcaaggccagacgtcatgatccgggttcgaacacgggacctcaaagttgtgtgtgaatttaatttcagtggtttaccacttcatct 31969725  T
Q  148 aagac 152  Q
    |||||    
T  31969724 aagac 31969720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 45264743 - 45264640
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||| || || |||| | ||| |||||||||||||| ||||||| |||| |||||||||||| |||||||||||||||||||| |||    
T  45264743 caaatgccgaaattgca-ggtcgaacgtcgtgactcgggttcgaacccgggacctcacagttttgtgtgagtttaatttcagtggattaccacttcctct 45264645  T
Q  148 aagac 152  Q
    |||||    
T  45264644 aagac 45264640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 6099596 - 6099709
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||| |||||||||||||||||||||   |||||| |||||||||||| |||||| | ||| | ||||||||| ||| ||||| ||||||||||||||    
T  6099596 caaatgtcgaaattgcaaggccggacgtcatgacccgagttcgaacccgaaacctcacaattgcgcgtgagtttagttttagtggtttaccacttcatct 6099695  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  6099696 aagacaaaaaaaaa 6099709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 39435306 - 39435419
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||| | ||||||||||| |||||||   || | ||||||||||||||||||||| ||||||||||||||||| |||  ||||||||| |||||||||    
T  39435306 caaatgtcaaaattgcaaggtcggacgtcatgatctgggttcgaacccgagacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatct 39435405  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  39435406 aagacaaaaaaaaa 39435419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 13891149 - 13891227
Alignment:
Q  83 cgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    ||||||||||||   ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| || |||||    
T  13891149 cgggttcgaacctaggacctcacagttgtgtgtgagtttattttcagtggtttaccacttcatctaagacaaaaaaaaa 13891227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 41849335 - 41849223
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||| ||||||| | || | ||||||||| |||  ||||||  |||||||||||||||| ||||||| |||||||| |||||||    
T  41849335 caaatgccgaaattgcaaggtcggacgtcgtgatctgggttcgaatccggaacctcactgttgtgtgtgagtttaatttcagt-gattaccatttcatct 41849237  T
Q  148 aagaccaacaaaaa 161  Q
    |||| ||| |||||    
T  41849236 aagatcaaaaaaaa 41849223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 18386730 - 18386808
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttatt 124  Q
    ||||||||| |||||||||||| |||| ||   ||| |||||||||||||| ||||||| |||||||||||||||||||    
T  18386730 gacaaatgctgaaattgcaaggtcggatgtcatgactcgggttcgaacccgggacctcacagttgtgtgtgagtttatt 18386808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 151
Target Start/End: Original strand, 18752363 - 18752468
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    ||||||| ||||||||| |||| ||||||| | || | |||||||||||||  |||| | ||||||||||| ||||| ||||||||||||  ||||||||    
T  18752363 gacaaataccgaaattgtaaggtcggacgtcgtgatcggggttcgaacccggaaccttacagttgtgtgtgggtttaatttcagtggattgacacttcat 18752462  T
Q  146 ctaaga 151  Q
     |||||    
T  18752463 ntaaga 18752468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 29425381 - 29425479
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||| |||||||||||||||||||   ||||||||      |||| || |||  | ||||||||||||||| ||||||||||||||||||||||||    
T  29425381 caaatgccaaaattgcaaggccggacgtcatgacccggg------cccgggatctcgcaattgtgtgtgagtttaatttcagtggattaccacttcatct 29425474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 20269607 - 20269667
Alignment:
Q  101 ctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||||||||| ||| |||||    
T  20269607 ctcacagttgtgtgtgagtttattttcaatggattaccatttcatctaagaacaaaaaaaa 20269667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 21056236 - 21056296
Alignment:
Q  101 ctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||||||||| ||| |||||    
T  21056236 ctcacagttgtgtgtgagtttattttcaatggattaccatttcatctaagaacaaaaaaaa 21056296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 33731551 - 33731455
Alignment:
Q  65 aggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    ||||| ||||| | ||||||||||| ||| || ||||||  ||||||||||||||||| ||| ||||| |||||||||| |||||||| || |||||    
T  33731551 aggccagacgtcgtgacccgggttcaaactcgggacctcccagttgtgtgtgagtttaattttagtggtttaccacttcttctaagacaaaaaaaaa 33731455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 7403798 - 7403696
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||| | |||||| |||| ||||||| | ||| || ||||||| ||||||| ||| |||||| |||||| ||| |||||||| |||||||||||||||    
T  7403798 caaatgtcaaaattgtaaggtcggacgtcgtgactcgagttcgaatccgagacatcacagttgtttgtgagcttaatttcagtg-attaccacttcatct 7403700  T
Q  148 aaga 151  Q
    ||||    
T  7403699 aaga 7403696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 31695334 - 31695260
Alignment:
Q  87 ttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    |||||||| | ||||||| | ||||||||||||||| ||||| ||| ||||||||||||||||||| || |||||    
T  31695334 ttcgaacctgggacctcacaattgtgtgtgagtttaatttcaatggtttaccacttcatctaagacaaaaaaaaa 31695260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 9775110 - 9775033
Alignment:
Q  84 gggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    |||||||||||||  |||||| |||| |||||||||||| ||| | |||||||| |||||||||||||| || |||||    
T  9775110 gggttcgaacccggaacctcacagttatgtgtgagtttaatttgaatggattacaacttcatctaagacaaaaaaaaa 9775033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 40932731 - 40932834
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||| |||||||| |||   |||||| | || |||| |||||| |||| | |||| |||||||||||| |||| ||| ||| ||||||||||||||    
T  40932731 gacaaatgtcgaaattgtaagattggacgtcgtgatccggattcgaatccgaaatctcacagttgtgtgtgactttaattttagtagattaccacttcat 40932830  T
Q  146 ctaa 149  Q
    ||||    
T  40932831 ctaa 40932834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 104
Target Start/End: Original strand, 22203722 - 22203780
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctca 104  Q
    ||||||| |||||||||||||| | ||||| | |||||||||||||| |||||||||||    
T  22203722 gacaaataccgaaattgcaaggtcagacgtcgtgacccgggttcgaatccgagacctca 22203780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 42364805 - 42364694
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||| ||| ||||||  ||   ||||| ||| |||| |  ||| ||||||||||||||||| ||||||| | ||||||||| ||||    
T  42364805 caaatgccgaaattgcaaagccagacgttatgatt-gggtttgaatccgaaatttcacagttgtgtgtgagtttaatttcagtagtttaccactttatct 42364707  T
Q  148 aagaccaacaaaaa 161  Q
    |||| |||||||||    
T  42364706 aaga-caacaaaaa 42364694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 14400781 - 14400852
Alignment:
Q  90 gaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    ||||||| ||||||| | ||||| ||||||||| ||  ||||| ||||||||||||||||||| || |||||    
T  14400781 gaacccgggacctcacaattgtgagtgagtttaattcaagtggtttaccacttcatctaagacaaaaaaaaa 14400852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 8e-47; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 46 - 161
Target Start/End: Original strand, 45874077 - 45874192
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45874077 gacaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcat 45874176  T
Q  146 ctaagaccaacaaaaa 161  Q
    |||||||||| |||||    
T  45874177 ctaagaccaaaaaaaa 45874192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 34739304 - 34739417
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34739304 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 34739403  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  34739404 aagaccaaaaaaaa 34739417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 23417587 - 23417474
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||| ||| | | ||||||||||||||||||||||||||||||||||||||||||    
T  23417587 caaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggactttacagttgtgtgtgagtttattttcagtggattaccacttcatct 23417488  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  23417487 aagaccaaaaaaaa 23417474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 28798492 - 28798379
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  28798492 caaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggaccttacagttgtgtgtgagtttattttcagtggattaccacttcatct 28798393  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  28798392 aagacaaaaaaaaa 28798379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 43140010 - 43139897
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43140010 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 43139911  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  43139910 aagacaaaaaaaaa 43139897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 46 - 161
Target Start/End: Original strand, 12735453 - 12735568
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||||| |||||| |||||| ||||||| |||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12735453 gacaaatgccaaaattgtaaggccagacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgagtttattttcagtggattaccacttcat 12735552  T
Q  146 ctaagaccaacaaaaa 161  Q
    |||||||||| |||||    
T  12735553 ctaagaccaaaaaaaa 12735568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 1173975 - 1174088
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1173975 caaatgccgaaattgcaaggccggacgtcatgacctgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 1174074  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  1174075 aagacaaaaaaaaa 1174088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 19849607 - 19849494
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  19849607 caaatgccgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcaatggtttaccacttcatct 19849508  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  19849507 aagaccaaaaaaaa 19849494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 26424961 - 26424849
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||| ||||||   |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26424961 caaatgccgaaattgcaaggc-ggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 26424863  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  26424862 aagaccaaaaaaaa 26424849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 53457848 - 53457961
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||| |||||||   |||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  53457848 caaatgccgaaattgcaaggtcggacgtcatgacccgggttcgaatccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 53457947  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  53457948 aagacaaaaaaaaa 53457961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 54768536 - 54768423
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||  ||||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  54768536 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccaggacctcacagttgtgtgcgagttttttttcagtggattaccacttcatct 54768437  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  54768436 aagaccaaaaaaaa 54768423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 55214676 - 55214779
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||| ||||||||||||||||||| | |||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  55214676 caaatgccaaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtatgagtttattttcagtggattaccactttatct 55214775  T
Q  148 aaga 151  Q
    ||||    
T  55214776 aaga 55214779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 12867865 - 12867978
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||| ||||||| | |||||| ||||||||| | || |||| ||||||| ||||||||||||||||||||||||||||||||||    
T  12867865 caaatgccgaaattgcaaggtcggacgtcgtgacccgagttcgaacctgggatctcacagttgtgagtgagtttattttcagtggattaccacttcatct 12867964  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  12867965 aagaccaaaaaaaa 12867978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 18257353 - 18257466
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   || |||||||||| |||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  18257353 caaatgccgaaattgcaaggccggacgtcatgatccgggttcgagcccgggacctcacagttgtgcgtgagtttattttcagtggattaccacttcatct 18257452  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  18257453 aagacaaaaaaaaa 18257466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 29581144 - 29581035
Alignment:
Q  51 atgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaag 150  Q
    ||||||||||||||||||||||||| | ||||  |||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||    
T  29581144 atgccgaaattgcaaggccggacgtcgtgacctaggttcgaacccgagacctcacagttgtgtgtgagtttaattt-agtggattaccacttcatctaag 29581046  T
Q  151 accaacaaaaa 161  Q
    || || |||||    
T  29581045 acaaaaaaaaa 29581035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 238562 - 238457
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||| |||||    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||     
T  238562 caaatgccgaaattgcaaggctggacgccatgacctgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatcg 238463  T
Q  148 aagacc 153  Q
    ||||||    
T  238462 aagacc 238457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 46 - 161
Target Start/End: Original strand, 22608007 - 22608122
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||| ||| ||||||||||||||||||||| | |||||||||||||||||| ||||||| |||||||| |||||||| ||||| |||||||| |||||||    
T  22608007 gacagatgtcgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtctgagtttaatttcaatggattactacttcat 22608106  T
Q  146 ctaagaccaacaaaaa 161  Q
    || |||| || |||||    
T  22608107 ctgagacaaaaaaaaa 22608122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 55400253 - 55400356
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    |||||||||||||||||||||||||||   || |||| ||||||| ||  |||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  55400253 aaatgccgaaattgcaaggccggacgtcatgatccggattcgaactcggaacctcatagttgtatgtgagtttattttcagtggattaccacttcatcta 55400352  T
Q  149 agac 152  Q
    ||||    
T  55400353 agac 55400356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 49 - 143
Target Start/End: Original strand, 39807869 - 39807963
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttc 143  Q
    ||||||||||||||||||||| ||| | | |||||| |||||||| || ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  39807869 aaatgccgaaattgcaaggccagacatcgtgacccgagttcgaactcgggacctcacagttgtgtgtgagtttaatttcagtggattaccacttc 39807963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 19225283 - 19225396
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||| || |||||||||   || ||||||||||||||| ||||||| | ||||| ||||||||| ||||||||| ||||||||||||||    
T  19225283 caaatgccgaaattgtaaagccggacgtcatgatccgggttcgaacccgggacctcacaattgtgcgtgagtttagtttcagtggtttaccacttcatct 19225382  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  19225383 aagacaaaaaaaaa 19225396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 56 - 161
Target Start/End: Complemental strand, 19674025 - 19673920
Alignment:
Q  56 gaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaa 155  Q
    ||||||||||||||| |||||| |||| ||||||||||||| ||||||| | || |||| ||||||| |||||||||||||||||||||| |||||| ||    
T  19674025 gaaattgcaaggccgaacgttgtgacctgggttcgaacccgggacctcacaattatgtgcgagtttaatttcagtggattaccacttcatttaagacaaa 19673926  T
Q  156 caaaaa 161  Q
     |||||    
T  19673925 aaaaaa 19673920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 11278006 - 11278115
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||||||| |   ||||||||||| |||||| ||||||| |||    |||||||||| ||||||||| ||||||||||||||    
T  11278006 caaatgccgaaattgcaaggccggacatcatgacccgggttcaaacccgggacctcacagt----tgtgagtttaatttcagtggtttaccacttcatct 11278101  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  11278102 aagaccaaaaaaaa 11278115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 23710436 - 23710337
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    ||||| ||||||||||||||||||||| | ||||||| |||||||| |  |||||| ||||  ||||||||||| |||||||||||||||||||||||||    
T  23710436 aaatgtcgaaattgcaaggccggacgtcgtgacccggattcgaacctggaacctcacagttacgtgtgagtttaatttcagtggattaccacttcatcta 23710337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 2864852 - 2864738
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||| |||||||||||| |||||| | ||||||||||||||||    |||||||||||||||||||| ||| |||||  || ||||||||||||||    
T  2864852 caaatgcctaaattgcaaggcgggacgtcgtgacccgggttcgaacctagaacctcagagttgtgtgtgagcttaatttcaaaggtttaccacttcatct 2864753  T
Q  148 aagaccaacaaaaat 162  Q
    || || || ||||||    
T  2864752 aacacaaaaaaaaat 2864738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 50033405 - 50033519
Alignment:
Q  48 caaatgccgaaattgcaaggcc-ggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatc 146  Q
    |||||||||||||||||| | | |||||||| |||||||||||||||  ||||| ||| |||||||||| |||||| ||||| || |||||||||||||     
T  50033405 caaatgccgaaattgcaaagactggacgttgtgacccgggttcgaacatgagacatcacagttgtgtgtaagtttaatttcaatgaattaccacttcata 50033504  T
Q  147 taagaccaacaaaaa 161  Q
    |||||| || |||||    
T  50033505 taagacaaaaaaaaa 50033519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 19814129 - 19814242
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||| ||||||| |||||||||||| | |||| |||||| |||| | ||||||| | || |||||||||||| ||||||| ||||||||||||||||    
T  19814129 caaatgcagaaattgtaaggccggacgtcgtgacctgggttcaaacctgggacctcacaattatgtgtgagtttaatttcagttgattaccacttcatct 19814228  T
Q  148 aagaccaacaaaaa 161  Q
    | ||| || |||||    
T  19814229 atgacaaaaaaaaa 19814242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 161
Target Start/End: Complemental strand, 24417974 - 24417869
Alignment:
Q  56 gaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaa 155  Q
    |||||||||||||  ||||| | |||||||||||||| ||||||||||| |||||||  |||||||| ||| |||||||||||||||| || ||||| ||    
T  24417974 gaaattgcaaggcacgacgtcgtgacccgggttcgaatccgagacctcacagttgtggatgagtttaattttagtggattaccacttcttccaagacaaa 24417875  T
Q  156 caaaaa 161  Q
     |||||    
T  24417874 aaaaaa 24417869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 24518089 - 24517972
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    ||||||||| ||||||| ||| |||||||||| |||||| |||||||||||| | |||| | || |||||||||||| ||| | || |||||||||| ||    
T  24518089 gacaaatgctgaaattgtaagaccggacgttgtgacccgtgttcgaacccgaaatctcacaattatgtgtgagtttaattttaatgaattaccacttaat 24517990  T
Q  146 ctaagaccaacaaaaata 163  Q
    || |||| || |||||||    
T  24517989 ctcagacaaaaaaaaata 24517972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 33770628 - 33770708
Alignment:
Q  84 gggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaatata 165  Q
    ||||||||||||| ||| ||| ||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  33770628 gggttcgaacccgggacttcatagttgtgtgtgagtttaatttcagtggtttaccgcttcatctaaga-caaaaaaaatata 33770708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 49030842 - 49030754
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattac 137  Q
    |||||| ||||||||||||||||||||| | || ||| ||||||||| || |||||| |||||||||||||||||  |||||||||||||    
T  49030842 caaatgtcgaaattgcaaggccggacgtcgtgatccgagttcgaaccgga-acctcatagttgtgtgtgagtttaacttcagtggattac 49030754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 1966611 - 1966687
Alignment:
Q  85 ggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    ||||||||  || ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||| || |||||    
T  1966611 ggttcgaattcgggacctcacagttgtgtgtgagtttaatttcagtggattacaacttcatctaagacaaaaaaaaa 1966687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 139
Target Start/End: Original strand, 32778147 - 32778238
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattacca 139  Q
    ||||||| || ||||||||||| ||||||| | || |||||||||||| |||||||||| | |  |||||||||||||||| ||||||||||||    
T  32778147 gacaaataccaaaattgcaaggtcggacgtcgtgatccgggttcgaacacgagacctcacaat--tgtgtgagtttatttttagtggattacca 32778238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 37134072 - 37134166
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccactt 142  Q
    ||||||| |||||| ||||| |||| ||   || |||||||||||||||| || ||| ||||||||||||||||| ||||||||| |||||||||    
T  37134072 caaatgctgaaattacaaggtcggatgtcatgatccgggttcgaacccgaaacttcacagttgtgtgtgagtttaatttcagtggtttaccactt 37134166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 46 - 161
Target Start/End: Original strand, 51287623 - 51287739
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgag-tttattttcagtggattaccacttca 144  Q
    |||||||||| |||||| |||| | ||||| | || | |||||  ||||||| |||||| ||||||||||||| |||| |||||||| ||||||| ||||    
T  51287623 gacaaatgccaaaattgtaaggtcagacgtcgtgatctgggtttaaacccgaaacctcacagttgtgtgtgagttttaatttcagtgaattaccatttca 51287722  T
Q  145 tctaagaccaacaaaaa 161  Q
    |||||||| || |||||    
T  51287723 tctaagacaaaaaaaaa 51287739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 57 - 151
Target Start/End: Complemental strand, 516551 - 516457
Alignment:
Q  57 aaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 151  Q
    |||||||||||  |||||||| ||| || ||| ||||||  || |||| | |||||||||||||||||||| |||||||||  ||||||||||||    
T  516551 aaattgcaaggttggacgttgtgactcgagtttgaacccaggatctcacaattgtgtgtgagtttattttcggtggattacagcttcatctaaga 516457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 46 - 151
Target Start/End: Original strand, 2804544 - 2804647
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||||  |||||| |||| ||||||||| ||||||||||||||||   |||||   |||| | |||||||||| ||| ||||||||||||||||||    
T  2804544 gacaaatgctaaaattgtaaggtcggacgttgtgacccgggttcgaacctaggacct--tagttttatgtgagtttaatttaagtggattaccacttcat 2804641  T
Q  146 ctaaga 151  Q
     |||||    
T  2804642 ttaaga 2804647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 49 - 151
Target Start/End: Original strand, 12767112 - 12767214
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    |||||||||||||| |||  |||||||   || | ||||||||| |||| |||||| ||||||||||||||||| ||||| ||| ||||  |||||||||    
T  12767112 aaatgccgaaattgtaagatcggacgtcatgatctgggttcgaatccgaaacctcacagttgtgtgtgagtttaatttcactggtttactgcttcatcta 12767211  T
Q  149 aga 151  Q
    |||    
T  12767212 aga 12767214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 22910363 - 22910269
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccac 140  Q
    |||||| | ||||||||||||| ||||||| | |||||||||||||||| | || |||| |||||||| | |||||| ||||| | |||||||||    
T  22910363 gacaaaagtcgaaattgcaaggtcggacgtcgtgacccgggttcgaacctgggatctcacagttgtgtctaagtttaatttcaatagattaccac 22910269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 46 - 140
Target Start/End: Original strand, 22968159 - 22968253
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccac 140  Q
    |||||| | ||||||||||||| ||||||| | |||||||||||||||| | || |||| |||||||| | |||||| ||||| | |||||||||    
T  22968159 gacaaaagtcgaaattgcaaggtcggacgtcgtgacccgggttcgaacctgggatctcacagttgtgtctaagtttaatttcaatagattaccac 22968253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 31015057 - 31015119
Alignment:
Q  99 acctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    |||||| ||||||||||||||||| ||||||||  ||||||||||||||||||| || |||||    
T  31015057 acctcacagttgtgtgtgagtttaatttcagtgctttaccacttcatctaagacaaaaaaaaa 31015119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 52172043 - 52171981
Alignment:
Q  99 acctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    |||||| | ||||||||||||||| ||||||||||||||||||| || ||||||||| |||||    
T  52172043 acctcacaattgtgtgtgagtttaatttcagtggattaccactttatttaagaccaaaaaaaa 52171981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 37620677 - 37620753
Alignment:
Q  84 gggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    ||||||||||||| ||  ||| || | |||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  37620677 gggttcgaacccgggatatcacaggtttgtgtgagtttaatttcagtggattaccacttcatcaaaga-caacaaaaa 37620753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 52768404 - 52768292
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||| |||| ||||||| ||||||| | ||  ||  ||||||||   || |||| ||||||||||||||||| ||||| |||||||||| |||||||    
T  52768404 caaatgctgaaactgcaaggtcggacgtcgtgattcgaattcgaaccaaggatctcacagttgtgtgtgagtttaatttcaatggattacca-ttcatct 52768306  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  52768305 aagaccaaaaaaaa 52768292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 50347372 - 50347320
Alignment:
Q  109 tgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| || |||||    
T  50347372 tgtgtgtgagtttaatttcagtggattaccacctcatctaagacaaaaaaaaa 50347320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 3465783 - 3465842
Alignment:
Q  55 cgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtg 114  Q
    ||||||||||||||||||||||| || || ||||||||| || ||||||| |||||||||    
T  3465783 cgaaattgcaaggccggacgttgtgatccaggttcgaactcgggacctcatagttgtgtg 3465842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 2075565 - 2075642
Alignment:
Q  84 gggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    ||||||||||||| ||||||| |||| |||||||||||| ||||| ||  ||| ||||| ||||||||| || |||||    
T  2075565 gggttcgaacccgggacctcacagttatgtgtgagtttaatttcaatgatttatcactttatctaagacaaaaaaaaa 2075642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 32441188 - 32441119
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtga 117  Q
    |||||| ||||||||||||||| ||| |   |||||||||||||||||| ||||||| ||||||| ||||    
T  32441188 caaatgtcgaaattgcaaggccagacatcatgacccgggttcgaacccgggacctcacagttgtgcgtga 32441119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 149
Target Start/End: Original strand, 23532129 - 23532172
Alignment:
Q  106 agttgtgtgtgagtttattttcagtggattaccacttcatctaa 149  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||    
T  23532129 agttgtgtgtgagtttaatttcagtgaattaccacttcttctaa 23532172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 16555382 - 16555444
Alignment:
Q  99 acctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    |||||| |||||||||||| |||| ||| | || |||||||||||||||||||| || |||||    
T  16555382 acctcacagttgtgtgtgaatttaattttaatgaattaccacttcatctaagacgaaaaaaaa 16555444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 48822890 - 48822940
Alignment:
Q  101 ctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 151  Q
    |||| ||||||||||||||||| ||||| | |||||||||||||| |||||    
T  48822890 ctcacagttgtgtgtgagtttaatttcaatagattaccacttcatttaaga 48822940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 1125953 - 1126014
Alignment:
Q  90 gaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 151  Q
    |||||| ||| |||| |||||||| |||||||| ||||| |  |||||||||||||||||||    
T  1125953 gaacccaagatctcacagttgtgtatgagtttaatttcaataaattaccacttcatctaaga 1126014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 75
Target Start/End: Complemental strand, 16342855 - 16342826
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgt 75  Q
    ||||||||||||||||||||||||||||||    
T  16342855 gacaaatgccgaaattgcaaggccggacgt 16342826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 122
Target Start/End: Complemental strand, 16887657 - 16887581
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagttta 122  Q
    ||||||||| |||||| ||| ||||||||| | || | |||||| ||| |||||| ||| |||| ||||||||||||    
T  16887657 gacaaatgcagaaattacaaagccggacgtcgtgatctgggttcaaactcgagacttcacagttatgtgtgagttta 16887581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 19119214 - 19119258
Alignment:
Q  109 tgtgtgtgagtttattttcagtggattaccacttcatctaagacc 153  Q
    |||||||||||||| ||||||||| |||| ||| |||||||||||    
T  19119214 tgtgtgtgagtttaatttcagtggtttactactccatctaagacc 19119258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 56505 - 56618
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  56505 caaatgccgaaattgcaaggtcggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 56604  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  56605 aagaccaaaaaaaa 56618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 1e-45; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 26605648 - 26605761
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  26605648 caaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgaatttattttcagtggattaccacttcatct 26605747  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  26605748 aagaccaaaaaaaa 26605761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 46 - 161
Target Start/End: Original strand, 34460391 - 34460506
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||   |||||| ||||||||||||||||||||||||||||||||||||||||    
T  34460391 gacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccagaacctcacagttgtgtgtgagtttattttcagtggattaccacttcat 34460490  T
Q  146 ctaagaccaacaaaaa 161  Q
    |||||||||| |||||    
T  34460491 ctaagaccaaaaaaaa 34460506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 10639710 - 10639597
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10639710 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 10639611  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  10639610 aagaccaaaaaaaa 10639597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 37197714 - 37197601
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37197714 caaatgccgaaattgcaaggctggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 37197615  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  37197614 aagaccaaaaaaaa 37197601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 19537331 - 19537446
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||  |||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  19537331 caaatgccgaaattgcaaggccggacgttgtgatccgggttcgaacccggaacctcacagttgtgtgtgtgtttattttcagtggattaccacttcatct 19537430  T
Q  148 aagaccaacaaaaata 163  Q
    |||||||| |||||||    
T  19537431 aagaccaaaaaaaata 19537446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 33083658 - 33083545
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33083658 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 33083559  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  33083558 aagacaaaaaaaaa 33083545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 11708702 - 11708815
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||  ||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  11708702 caaatgccgaaattgtaaggccggacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgggtttattttcagtggattaccacttcatct 11708801  T
Q  148 aagaccaacaaaaa 161  Q
    || ||||| |||||    
T  11708802 aataccaaaaaaaa 11708815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 23839883 - 23839996
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23839883 caaatgccaaaattgcaaggccggacgttgtgacctgggttcgaacctgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 23839982  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  23839983 aagacaaaaaaaaa 23839996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 11459739 - 11459852
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||| |||||||   |||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||||||||||||||||||    
T  11459739 caaatgccgaaattgcaaggtcggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgtgtttattttcaatggattaccacttcatct 11459838  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  11459839 aagaccaaaaaaaa 11459852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 45125269 - 45125156
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||| |||||||||||||| |||  |||||||||| ||  |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45125269 caaatgccgaaattgtaaggccggacgttgtgacttgggttcgaactcggaacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 45125170  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  45125169 aagaccaaaaaaaa 45125156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 29659322 - 29659207
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||| |||||| ||||||| || ||| |||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29659322 caaatgccaaaattgtaaggccgaacattgtgacccgggttcgaacccatgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 29659223  T
Q  148 aagaccaacaaaaata 163  Q
    ||||| || |||||||    
T  29659222 aagacaaaaaaaaata 29659207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 19816244 - 19816358
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||| |||||||||||||||||||||||| |||||||||| |||||||  |||||  |||||||| |||||||||||||||| |||||| |||||||||    
T  19816244 caaataccgaaattgcaaggccggacgttgtgacccgggtttgaacccggaacctcgcagttgtgtatgagtttattttcagtagattacaacttcatct 19816343  T
Q  148 aagaccaacaaaaat 162  Q
    |||||||| ||||||    
T  19816344 aagaccaaaaaaaat 19816358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 48 - 165
Target Start/End: Complemental strand, 11816655 - 11816538
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgag-tttattttcagtggattaccacttcatc 146  Q
    |||||||||||||||||||| ||||||| | |||| |||||||||||||  |||||| |||||| |||||| |||| |||||||||||||||||||||||    
T  11816655 caaatgccgaaattgcaaggtcggacgtcgtgacctgggttcgaacccggaacctcacagttgtatgtgagttttaatttcagtggattaccacttcatc 11816556  T
Q  147 taagaccaacaaaaatata 165  Q
    ||||||||| |||||||||    
T  11816555 taagaccaa-aaaaatata 11816538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 19048778 - 19048891
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||| ||||||||||||   || ||||||||||||||| ||||||| | ||||||||||||||| ||||||||| ||||||||||||||    
T  19048778 caaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagtttagtttcagtggtttaccacttcatct 19048877  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  19048878 aagacaaaaaaaaa 19048891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 39535638 - 39535525
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||| ||||||||||||||||||||| | |||||||||||||||||| ||||||| |||| | |||||||||| ||| || |||||||||||||||||    
T  39535638 caaatgtcgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttttatgtgagtttaatttgagcggattaccacttcatct 39535539  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  39535538 aagacaaaaaaaaa 39535525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 46 - 152
Target Start/End: Complemental strand, 38440303 - 38440197
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||||||||||||||||||||||||| | ||||||| | |||||| ||||||||  || | |||||||||||| ||| ||||||||||||||||||    
T  38440303 gacaaatgccgaaattgcaaggccggacgtcgtgacccggatccgaacctgagacctcctagctatgtgtgagtttaattttagtggattaccacttcat 38440204  T
Q  146 ctaagac 152  Q
    |||||||    
T  38440203 ctaagac 38440197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 52 - 155
Target Start/End: Original strand, 4851348 - 4851451
Alignment:
Q  52 tgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 151  Q
    ||||||||||| || ||||||||| | || |||||||| |||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  4851348 tgccgaaattgtaaagccggacgtcgtgatccgggttcaaacccgggacctcacagttgtgtgtgagtttaattttagtggattaccacttcatccaaga 4851447  T
Q  152 ccaa 155  Q
    ||||    
T  4851448 ccaa 4851451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 46 - 152
Target Start/End: Complemental strand, 43778574 - 43778468
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    ||||||| |||||||||||| |||| | || | |||| |||||||||||  |||| ||| ||||||||||||||||||||||| ||||||||||||||||    
T  43778574 gacaaataccgaaattgcaaagccgaatgtcgtgacctgggttcgaacctaagacttcacagttgtgtgtgagtttattttcattggattaccacttcat 43778475  T
Q  146 ctaagac 152  Q
    |||||||    
T  43778474 ctaagac 43778468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 39831547 - 39831435
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||| ||||||||||||||||||||||   || ||||||||||||| | ||||||| | ||||||||||||||| ||||||||| ||||||||||||||    
T  39831547 caaataccgaaattgcaaggccggacgtcatgatccgggttcgaaccgg-gacctcacaattgtgtgtgagtttaatttcagtggtttaccacttcatct 39831449  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  39831448 aagacaaaaaaaaa 39831435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 7275989 - 7275877
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    ||||||||||||||||||| |||| || | | |||||||||||||||| ||||||| |||||||||| | |||| ||| | |||||||||||||||||||    
T  7275989 aaatgccgaaattgcaaggtcggatgtcgtggcccgggttcgaacccgggacctcacagttgtgtgtaaatttaattttaatggattaccacttcatcta 7275890  T
Q  149 agaccaacaaaaa 161  Q
    |||| || |||||    
T  7275889 agacaaaaaaaaa 7275877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 15782612 - 15782715
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    ||||||||||||||||| |||| |||||||   |||||||||||||||||||||||| | || |||||| ||||||| ||||||||| ||||||||||||    
T  15782612 gacaaatgccgaaattgtaaggtcggacgtcatgacccgggttcgaacccgagaccttacag-tgtgtgggagtttaatttcagtggtttaccacttcat 15782710  T
Q  146 ctaag 150  Q
    |||||    
T  15782711 ctaag 15782715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 46 - 161
Target Start/End: Complemental strand, 27138023 - 27137909
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    ||||||||| ||||||| ||||||| || | | |||| ||||||||||||| ||||| | |||| | |||||||||| ||||||||||||||||||||||    
T  27138023 gacaaatgctgaaattg-aaggccgaacatcgtgacctgggttcgaacccgggaccttacagttttatgtgagtttaatttcagtggattaccacttcat 27137925  T
Q  146 ctaagaccaacaaaaa 161  Q
    |||||||||| |||||    
T  27137924 ctaagaccaaaaaaaa 27137909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 16654388 - 16654488
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    ||||||||||||||||||||||||||  | || ||| |||||||||||  |||||| ||||||||||||||||||||| |||| ||| || |||||||||    
T  16654388 aaatgccgaaattgcaaggccggacgccgtgatccgagttcgaacccggaacctcacagttgtgtgtgagtttatttttagtgaattgccccttcatcta 16654487  T
Q  149 a 149  Q
    |    
T  16654488 a 16654488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 34234554 - 34234659
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||| |||| |||| || | | ||| ||||||||||||||| |||  |||||||||||| ||||||| ||| ||||||||||||    
T  34234554 caaatgccgaaattgcaaggtcggatgttgtgatctgagtttgaacccgagacctcatagt--tgtgtgagtttaatttcagtagatcaccacttcatct 34234651  T
Q  148 aagaccaa 155  Q
    ||||||||    
T  34234652 aagaccaa 34234659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 149
Target Start/End: Complemental strand, 40786315 - 40786212
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||||  |||||||  ||||| ||||||||||| ||| |||| |||| |||||| |    
T  40786315 gacaaatgccgaaattgcaaggccggacgtcgtgaccctggttcgaacctaagacctcgcagttgagtgtgagtttaattttagtgaattatcacttctt 40786216  T
Q  146 ctaa 149  Q
    ||||    
T  40786215 ctaa 40786212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 43684091 - 43684194
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    ||||||||||||||||||||||||||||     |||  ||||||||||||| |||| || | || |||||||||||||||||| ||||||||||||||||    
T  43684091 gacaaatgccgaaattgcaaggccggacaccatgacatgggttcgaacccgggaccccacaattatgtgtgagtttattttcactggattaccacttcat 43684190  T
Q  146 ctaa 149  Q
    ||||    
T  43684191 ctaa 43684194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 42578243 - 42578296
Alignment:
Q  99 acctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 152  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42578243 acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 42578296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 7349122 - 7349223
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||| || ||||||||||||||||| | || ||| ||||||| ||||||||||| |  | |||||||||||| ||| ||||||| ||||||||||||    
T  7349122 caaatgctgatattgcaaggccggacgtcgtgatccgagttcgaatccgagacctcacaactatgtgtgagtttaattttagtggatcaccacttcatct 7349221  T
Q  148 aa 149  Q
    ||    
T  7349222 aa 7349223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 152
Target Start/End: Complemental strand, 44181993 - 44181887
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    ||||||||| ||||||| |||| || | |||| ||   || |||||| ||| || |||| ||||||||||||||||||||||||||||||| ||||| ||    
T  44181993 gacaaatgctgaaattgtaaggtcgaatgttgtgatttggattcgaatccgggatctcacagttgtgtgtgagtttattttcagtggattatcacttaat 44181894  T
Q  146 ctaagac 152  Q
    |||||||    
T  44181893 ctaagac 44181887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 4800900 - 4801001
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||| |||||||||||||| |||||| | |||| | |||||||||||  |||||   ||| |||||||||||| || ||||| |||||||||||||||    
T  4800900 caaatgtcgaaattgcaaggctggacgtcgtgacctgagttcgaacccggaacctcgcggttatgtgtgagtttaattccagtgaattaccacttcatct 4800999  T
Q  148 aa 149  Q
    ||    
T  4801000 aa 4801001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 46 - 161
Target Start/End: Original strand, 42025692 - 42025808
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagt-ttattttcagtggattaccacttca 144  Q
    |||||||| |||||||  ||||||||| || | |||| | ||||||||||   |||||| | |||||||||||| ||| |||||||||| ||||||||||    
T  42025692 gacaaatgtcgaaattttaaggccggatgtcgtgacctgagttcgaacccagaacctcacaattgtgtgtgagtcttaatttcagtggactaccacttca 42025791  T
Q  145 tctaagaccaacaaaaa 161  Q
    |||||||| || |||||    
T  42025792 tctaagacaaaaaaaaa 42025808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 40825231 - 40825161
Alignment:
Q  79 gacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaa 149  Q
    |||||||||||||| |||||| ||   || |||||||||||||||||||| ||||||| ||||||||||||    
T  40825231 gacccgggttcgaatccgagatcttccaggtgtgtgtgagtttattttcaatggattatcacttcatctaa 40825161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 21312229 - 21312331
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||| | |||||| ||| |||||||||| || | ||| ||||||| | ||||||| | |||||  |||||||||||| |||| |||||||||||||||    
T  21312229 caaatgtcaaaattgtaagaccggacgttgtgatctgggatcgaacctgggacctcacaattgtg--tgagtttatttttagtgaattaccacttcatct 21312326  T
Q  148 aagac 152  Q
    |||||    
T  21312327 aagac 21312331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 33001762 - 33001839
Alignment:
Q  84 gggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    |||||||||| |  ||||||| |||| | |||||||||| |||||||||||||||| |||||||||||| || |||||    
T  33001762 gggttcgaacacaggacctcacagttatatgtgagtttaatttcagtggattaccatttcatctaagacaaaaaaaaa 33001839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 15345016 - 15344966
Alignment:
Q  101 ctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 151  Q
    ||||||||||||||||| |||||||||||||||| |||| ||||| |||||    
T  15345016 ctcagagttgtgtgtgaatttattttcagtggatcaccatttcatttaaga 15344966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 46 - 166
Target Start/End: Complemental strand, 6055111 - 6054991
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattacc-acttca 144  Q
    |||||||||| ||||||||||| || |||| |  |  ||| ||||||| |  ||||||| || |||||||||||||| ||| ||||||||||| |||| |    
T  6055111 gacaaatgccaaaattgcaaggtcgaacgtcgtaattcggattcgaactcaggacctcatagctgtgtgtgagtttaattttagtggattacctacttta 6055012  T
Q  145 tctaagaccaacaaaaatataa 166  Q
    ||||||| ||||||||| ||||    
T  6055011 tctaaga-caacaaaaaaataa 6054991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 33565010 - 33564900
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    ||||| |||||||| ||||| |||||| | ||||  |||||||||||||||||| | |||  |||||||||||| ||||| ||| |||| | || |||||    
T  33565010 aaatgtcgaaattgtaaggctggacgtcgtgacctaggttcgaacccgagaccttatagt--tgtgtgagtttaatttcaatggcttactatttaatcta 33564913  T
Q  149 agaccaacaaaaa 161  Q
    | ||||| |||||    
T  33564912 aaaccaaaaaaaa 33564900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 38400494 - 38400567
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagttta 122  Q
    ||||||||||||||||||  ||||||| | |||| ||||||||| ||  ||||||| ||||||||| |||||||    
T  38400494 aaatgccgaaattgcaagatcggacgtcgtgaccagggttcgaatccaggacctcatagttgtgtgcgagttta 38400567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 15072115 - 15072204
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggatta 136  Q
    |||||||  ||||||||||| || ||| || | || |||| |||||||||| ||||||| | ||||||||| ||||| |||||||||||||    
T  15072115 gacaaatatcgaaattgcaaagctggatgtcgtgatccggattcgaacccgggacctcata-ttgtgtgtgtgtttaatttcagtggatta 15072204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 20497657 - 20497592
Alignment:
Q  85 ggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaag 150  Q
    ||||| ||||||  |||||| | |||| |||||||||  ||||||||| |||||||||||||||||    
T  20497657 ggttcaaacccggaacctcacaattgtatgtgagttttatttcagtggtttaccacttcatctaag 20497592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 34239924 - 34239811
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||| |||| | ||||| | ||| || |||||||| |   |||| | |||||||| |||||||| ||||| |  ||||||||||||| |    
T  34239924 caaatgccgaaattgtaaggtcagacgtcgtgactcgagttcgaactcagaaccttacagttgtgtatgagtttaatttcaataaattaccacttcattt 34239825  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  34239824 aagacaaaaaaaaa 34239811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 25501887 - 25501839
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccg 96  Q
    ||||||| |||||||||||||||||||| | ||||  ||||||||||||    
T  25501887 caaatgctgaaattgcaaggccggacgtcgtgacctaggttcgaacccg 25501839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 34093259 - 34093363
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtgga-ttaccacttca 144  Q
    |||||||| | |||||  |||| ||||||||| || || | ||| |||||||||| ||| |  | ||| |||||||| |||||||||| |||||||||||    
T  34093259 gacaaatgtcaaaattttaaggtcggacgttgtgatccagattcaaacccgagacatcacaaatatgtatgagtttaatttcagtggacttaccacttca 34093358  T
Q  145 tctaa 149  Q
    |||||    
T  34093359 tctaa 34093363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 41780417 - 41780473
Alignment:
Q  106 agttgtgtgtgagtttattttcagt-ggattaccacttcatctaagaccaacaaaaa 161  Q
    ||||||||||| ||||| ||||||| |||||||| ||||||||||||| || |||||    
T  41780417 agttgtgtgtgggtttaatttcagtgggattaccgcttcatctaagacaaaaaaaaa 41780473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 5e-45; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 2146661 - 2146773
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  2146661 aaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccaagacctcacagttgtgtgtgggtttattttcagtggattaccacttcatcta 2146760  T
Q  149 agaccaacaaaaa 161  Q
    ||||||| |||||    
T  2146761 agaccaaaaaaaa 2146773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 48 - 166
Target Start/End: Original strand, 23358209 - 23358327
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||| |||||||||||||||||||||| |  ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23358209 caaataccgaaattgcaaggccggacgtcgtaacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 23358308  T
Q  148 aagaccaacaaaaatataa 166  Q
    |||||||| ||||||||||    
T  23358309 aagaccaaaaaaaatataa 23358327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 4106762 - 4106875
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4106762 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 4106861  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  4106862 aagaccaaaaaaaa 4106875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 40058262 - 40058375
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  40058262 caaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtatgagtttattttcagtggattaccacttcatct 40058361  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  40058362 aagaccaaaaaaaa 40058375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 44083964 - 44084077
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44083964 caaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 44084063  T
Q  148 aagaccaacaaaaa 161  Q
    || ||||| |||||    
T  44084064 aaaaccaaaaaaaa 44084077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 4107333 - 4107446
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4107333 caaatgccgaaattgcaaggccggacgtcacgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 4107432  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  4107433 aagacaaaaaaaaa 4107446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 31770636 - 31770523
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||| ||   |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31770636 caaatgccgaaattgcaaggccggatgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 31770537  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  31770536 aagacaaaaaaaaa 31770523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 53 - 166
Target Start/End: Complemental strand, 47570817 - 47570704
Alignment:
Q  53 gccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 152  Q
    |||||||||||||||||||||||   |||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  47570817 gccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 47570718  T
Q  153 caacaaaaatataa 166  Q
    ||| ||||| ||||    
T  47570717 caaaaaaaaaataa 47570704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 47250355 - 47250242
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||| | || |||  ||||||||||||||||||||||||||||||||||||||||||    
T  47250355 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacctgggatctcttagttgtgtgtgagtttattttcagtggattaccacttcatct 47250256  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  47250255 aagaccaaaaaaaa 47250242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 25546378 - 25546266
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    |||||||||||||||||||||||||||   |||||||||||||| ||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||    
T  25546378 aaatgccgaaattgcaaggccggacgtcatgacccgggttcgaatccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatcta 25546279  T
Q  149 agaccaacaaaaa 161  Q
    ||||||| |||||    
T  25546278 agaccaaaaaaaa 25546266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 8439102 - 8439215
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||| ||||||||||| ||||||||| ||||||| |||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  8439102 caaatgccaaaattgcaaggtcggacgttgtgacccggattcgaacccaggacctcacagttgtgtgtgaatttattttcagtggattaccacttcatct 8439201  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  8439202 aagacaaaaaaaaa 8439215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 25112351 - 25112238
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||| |||||||||||||| |||||||   |||| ||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  25112351 caaataccgaaattgcaaggtcggacgtcatgacctgggttcgaacccgggacctcacagttgtgtgtgggtttattttcagtggattaccacttcatct 25112252  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  25112251 aagaccaaaaaaaa 25112238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 161
Target Start/End: Complemental strand, 38781304 - 38781199
Alignment:
Q  56 gaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaa 155  Q
    ||||||||||||||| | || | ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38781304 gaaattgcaaggccgaatgtcgtgacccggattcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaa 38781205  T
Q  156 caaaaa 161  Q
     |||||    
T  38781204 aaaaaa 38781199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 7162892 - 7162781
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| || ||||||| | |||||||  |||||||||||||||||||||||||||||||    
T  7162892 caaatgccgaaattgtaaggccggacgttgtgacccgggttcgaactcgggacctcacaattgtgtg--agtttattttcagtggattaccacttcatct 7162795  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  7162794 aagacaaaaaaaaa 7162781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 41183839 - 41183945
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||| |||||||||||| | |||||| |||| |||||||||||||||||||||||||| ||||||||||    
T  41183839 caaatgccgaaattgcaaggccggacgtcttgacctgggttcgaacccaatacctcacagttatgtgtgagtttattttcagtggattatcacttcatct 41183938  T
Q  148 aagacca 154  Q
    |||||||    
T  41183939 aagacca 41183945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 48146778 - 48146890
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    |||||| |||||||||||| | || || | |||||||||||||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||    
T  48146778 aaatgcagaaattgcaaggtcagatgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttaattttcattggattaccacttcatcta 48146877  T
Q  149 agaccaacaaaaa 161  Q
    ||||||| |||||    
T  48146878 agaccaaaaaaaa 48146890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 5772923 - 5772818
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||| |||||  || ||||||||||||||| ||| |||||| ||||||||||||||||| ||||||||| |||||||||||| |    
T  5772923 caaatgccgaaattgcaaggtcggacaatgtgacccgggttcgaactcgaaacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcattt 5772824  T
Q  148 aagacc 153  Q
    ||||||    
T  5772823 aagacc 5772818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 11355846 - 11355951
Alignment:
Q  47 acaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatc 146  Q
    ||||||||||||||||||||| ||||||||  || | || |||||||||| || |||| ||||||||||||||||| |||||||||||||||||||||||    
T  11355846 acaaatgccgaaattgcaaggtcggacgttatgatctggattcgaacccgggatctcacagttgtgtgtgagtttaatttcagtggattaccacttcatc 11355945  T
Q  147 taagac 152  Q
    ||||||    
T  11355946 taagac 11355951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 145
Target Start/End: Complemental strand, 27229584 - 27229484
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgag-tttattttcagtggattaccacttca 144  Q
    |||||||| ||||||||||||||||||||| | |||| ||||||||||||| ||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  27229584 gacaaatgtcgaaattgcaaggccggacgtcgtgacctgggttcgaacccgggacctcacagttgtgtgtgagttttaatttcagtggattaccacttca 27229485  T
Q  145 t 145  Q
    |    
T  27229484 t 27229484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 43753858 - 43753754
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgag-tttattttcagtggattaccacttcatc 146  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||||  |||||| |||||| |||||| |||| |||||||||||||||||||||||    
T  43753858 caaatgccgaaattgcaaggccggacgtcgtgacctgggttcgaacccggaacctcacagttgtatgtgagttttaatttcagtggattaccacttcatc 43753759  T
Q  147 taaga 151  Q
    |||||    
T  43753758 taaga 43753754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 28603035 - 28603148
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||| |||||||||||||| | |||| | ||||||||||||||| ||| | |||| |||||||||| | ||||||||||||||||||||||    
T  28603035 caaatgccgaaatcgcaaggccggacgtcgtgacctgagttcgaacccgagacttcacaattgtatgtgagtttaatctcagtggattaccacttcatct 28603134  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  28603135 aagacaaaaaaaaa 28603148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 38033753 - 38033858
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||| |||| ||||| ||| || |||||||| || ||| ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  38033753 caaatgccgaaattgtaaggtcggacattgtgatccgggttcaaatccgggacctcacagttgtgtgtgagtttattttcagtggagtaccacttcatct 38033852  T
Q  148 aagacc 153  Q
    | ||||    
T  38033853 atgacc 38033858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 43203330 - 43203442
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||| ||||| |||||  | |||||||||||||||||| ||||| | |||||||||||||||||||| |||||||||  |||||||| |    
T  43203330 caaatgccgaaattgtaaggcgggacgccgtgacccgggttcgaacccgggaccttacagttgtgtgtgagtttatttacagtggattttcacttcatat 43203429  T
Q  148 aagaccaacaaaa 160  Q
    |||||||| ||||    
T  43203430 aagaccaaaaaaa 43203442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 46 - 161
Target Start/End: Original strand, 5587302 - 5587417
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    ||||||||||||||||||||| |||||| | | || ||||||||||||||  ||||||| | ||  ||||||||||| ||| ||||||||||||||||||    
T  5587302 gacaaatgccgaaattgcaagtccggacatcgtgatccgggttcgaacccaggacctcacatttacgtgtgagtttaattttagtggattaccacttcat 5587401  T
Q  146 ctaagaccaacaaaaa 161  Q
    |||||||||| |||||    
T  5587402 ctaagaccaaaaaaaa 5587417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 46 - 161
Target Start/End: Original strand, 5592263 - 5592378
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    ||||||||||||||||||||| |||||| | | || ||||||||||||||  ||||||| | ||  ||||||||||| ||| ||||||||||||||||||    
T  5592263 gacaaatgccgaaattgcaagtccggacatcgtgatccgggttcgaacccaggacctcacatttacgtgtgagtttaattttagtggattaccacttcat 5592362  T
Q  146 ctaagaccaacaaaaa 161  Q
    |||||||||| |||||    
T  5592363 ctaagaccaaaaaaaa 5592378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 46 - 161
Target Start/End: Complemental strand, 32606436 - 32606321
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    ||||||| |||||||||||||||||||||| | ||||| |||||||||||||||||| | |||| | ||||| |||| |||||||| ||||||| |||||    
T  32606436 gacaaataccgaaattgcaaggccggacgtcgtgacccaggttcgaacccgagaccttacagttttatgtgaatttaatttcagtgaattaccaattcat 32606337  T
Q  146 ctaagaccaacaaaaa 161  Q
    ||||||| || |||||    
T  32606336 ctaagacaaaaaaaaa 32606321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 55 - 161
Target Start/End: Complemental strand, 39514080 - 39513974
Alignment:
Q  55 cgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagacca 154  Q
    ||||||||||||||||||||| | |||||| ||||||||||| ||||| | |||| |||||||||||| |||| ||||||||||||||||||| |||| |    
T  39514080 cgaaattgcaaggccggacgtcgtgacccgagttcgaacccgggaccttacagttatgtgtgagtttaatttcggtggattaccacttcatctgagacaa 39513981  T
Q  155 acaaaaa 161  Q
    | |||||    
T  39513980 aaaaaaa 39513974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 47557806 - 47557918
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    ||||||||||||| ||||| || ||||   ||||||||||||||||||  |||||| |||||| |||||||||| ||||||||| |||||||||||||||    
T  47557806 aaatgccgaaattacaaggtcgcacgtcatgacccgggttcgaacccggaacctcacagttgtatgtgagtttaatttcagtggtttaccacttcatcta 47557905  T
Q  149 agaccaacaaaaa 161  Q
    |||| || |||||    
T  47557906 agacaaaaaaaaa 47557918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 15634983 - 15634868
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||| || | ||||||| | ||||||| |||||| |||  || ||| ||||||||||||||||||||||||| ||||||||||||||||    
T  15634983 caaatgccgaaattgtaaagtcggacgtcgtgacccggattcgaaaccggaacttcacagttgtgtgtgagtttattttcagtagattaccacttcatct 15634884  T
Q  148 aagaccaacaaaaata 163  Q
    ||  |||| |||||||    
T  15634883 aaagccaaaaaaaata 15634868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 29484859 - 29484746
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   || | ||||| ||||||| ||||||| | |||| |||||||||| ||||||||||||| |||||||| |    
T  29484859 caaatgccgaaattgcaaggccggacgtcatgatctgggtttgaacccgggacctcacaattgtatgtgagtttaatttcagtggattatcacttcatat 29484760  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  29484759 aagacaaaaaaaaa 29484746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 46 - 152
Target Start/End: Complemental strand, 43171045 - 43170939
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||||||||||||||||||||||||| |  |||| ||||| || | ||||| ||  |||||| |||||||||| ||||| ||||||||||| ||||    
T  43171045 gacaaatgccgaaattgcaaggccggacgtcgtaacccaggttcaaatcggagacttcccagttgtatgtgagtttaatttcaatggattaccacgtcat 43170946  T
Q  146 ctaagac 152  Q
    |||||||    
T  43170945 ctaagac 43170939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 19630714 - 19630665
Alignment:
Q  106 agttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaa 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19630714 agttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaa 19630665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 49 - 164
Target Start/End: Complemental strand, 27915684 - 27915568
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgg-gttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||| |||||||||||| ||||||| | ||||  | |||||||||  ||| |||| |||||||| |||||||| ||||| || |||||||||||||||    
T  27915684 aaatgctgaaattgcaaggtcggacgtcgtgaccttgagttcgaacctaagatctcacagttgtgtatgagtttaatttcaatgaattaccacttcatct 27915585  T
Q  148 aagaccaacaaaaatat 164  Q
    |||||||| ||||||||    
T  27915584 aagaccaaaaaaaatat 27915568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 4001945 - 4001835
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    ||||| |||||||||||||||||| || | ||||||||||||||| || ||||||  ||   |||||||||||| ||||| ||| |||||||||||||||    
T  4001945 aaatgtcgaaattgcaaggccggatgtcgtgacccgggttcgaactcgggacctctcag--ctgtgtgagtttaatttcaatggtttaccacttcatcta 4001848  T
Q  149 agaccaacaaaaa 161  Q
    |||| || |||||    
T  4001847 agacaaaaaaaaa 4001835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 48444255 - 48444143
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    |||||||||||||| ||| | |||||| | || | ||||||||||||   || ||| |||||||||| |||||| |||||||| ||||||||||||||||    
T  48444255 aaatgccgaaattgtaagactggacgtcgtgatctgggttcgaaccctgtacttcacagttgtgtgtaagtttaatttcagtgaattaccacttcatcta 48444156  T
Q  149 agaccaacaaaaa 161  Q
    |||| || |||||    
T  48444155 agacaaaaaaaaa 48444143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 5463045 - 5462939
Alignment:
Q  57 aaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaac 156  Q
    ||||||||| |  ||| |||| || |||| |||||||| |||| |||| ||||||||||||||||| ||||| ||||  |||||||||||| |||||||     
T  5463045 aaattgcaatgttggatgttgtgatccggattcgaacctgagatctcacagttgtgtgtgagtttaatttcaatggagaaccacttcatcttagaccaaa 5462946  T
Q  157 aaaaata 163  Q
    |||||||    
T  5462945 aaaaata 5462939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 42081720 - 42081619
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||| | ||||||||||  || |||||| || ||||||||||||| | ||||||| |||||||||  ||||||||||||||| |||||||||| ||||    
T  42081720 caaatgtcaaaattgcaagatcgaacgttgtgatccgggttcgaacctg-gacctcacagttgtgtg--agtttattttcagtgaattaccactttatct 42081624  T
Q  148 aagac 152  Q
    |||||    
T  42081623 aagac 42081619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 13887195 - 13887282
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattac 137  Q
    ||||||||||| ||||||| |||||||| | ||||| ||||||||||||  |||||| |||  ||| |||||||| ||||||||||||||    
T  13887195 caaatgccgaacttgcaagaccggacgtcgtgacccaggttcgaacccggaacctcacagt--tgtatgagtttaatttcagtggattac 13887282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 34763510 - 34763560
Alignment:
Q  92 acccgagacctcagagttgtgtgtgagtttattttcagtggattaccactt 142  Q
    ||||| ||||||| ||||||||||||||||| |||||||||||||||||||    
T  34763510 acccgggacctcacagttgtgtgtgagtttaatttcagtggattaccactt 34763560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 35577949 - 35577867
Alignment:
Q  79 gacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    |||||| ||||||||||||||| ||| | |||||||| |||||| ||||| |||||||| | |||||||||||| || |||||    
T  35577949 gacccgagttcgaacccgagacttcacaattgtgtgtaagtttaatttcaatggattacaatttcatctaagacaaaaaaaaa 35577867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 40657591 - 40657657
Alignment:
Q  86 gttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 152  Q
    ||||||| | ||||||||| |||| |||| ||||||| ||||||||||||| |||||||||||||||    
T  40657591 gttcgaatctgagacctcatagttatgtgcgagtttaatttcagtggattatcacttcatctaagac 40657657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 10220540 - 10220464
Alignment:
Q  84 gggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    ||||||||| |||| |||||| |||| |||||||||||| ||||||||| |||||| |||||||||||| || |||||    
T  10220540 gggttcgaatccgaaacctcacagttttgtgtgagtttaatttcagtggtttacca-ttcatctaagacaaaaaaaaa 10220464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 25872787 - 25872892
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||| ||| ||||| ||||||| | || || ||||||||||   ||||| | | |||||| ||||||||||||| |||  ||||||||||||||    
T  25872787 caaatgccgatattacaaggtcggacgtcgtgatccaggttcgaacctatgaccttacaattgtgtatgagtttattttctgtgatttaccacttcatct 25872886  T
Q  148 aagacc 153  Q
    ||||||    
T  25872887 aagacc 25872892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 35309886 - 35309982
Alignment:
Q  56 gaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 152  Q
    ||||||| ||||||||||||   |||| || |||||| ||| || |||| | ||||||| ||||||| ||||||||| ||| |||||||||||||||    
T  35309886 gaaattgtaaggccggacgtcttgacctggtttcgaatccgggatctcacaattgtgtgcgagtttaatttcagtggtttatcacttcatctaagac 35309982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 101 - 152
Target Start/End: Complemental strand, 31288275 - 31288224
Alignment:
Q  101 ctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 152  Q
    |||| |||||||||| |||||| ||||||||| |||||||||||||||||||    
T  31288275 ctcacagttgtgtgtaagtttaatttcagtggtttaccacttcatctaagac 31288224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 18506341 - 18506281
Alignment:
Q  86 gttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||| ||| ||| ||||||||||||| ||||||||| ||||| ||||||||    
T  18506341 gttcgaacccgagacttcacagt-gtgtgtgagtttaatttcagtggtttaccgcttcatct 18506281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 40642996 - 40643099
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||| |||||||| |||||| ||| ||| || |||||||| |||||||||||       ||  |||||||||| ||||||||||||| || ||| |    
T  40642996 gacaaatgtcgaaattgtaaggccagacattgtgatccgggttcaaacccgagacc-------tgaatgtgagtttaatttcagtggattatcatttcgt 40643088  T
Q  146 ctaagaccaac 156  Q
    |||||||||||    
T  40643089 ctaagaccaac 40643099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 47961059 - 47960979
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttca 128  Q
    |||||||| ||||| ||||| | |||||   || ||||||||||||||| ||||||  ||||||||||||||||| |||||    
T  47961059 caaatgccaaaattacaaggtcagacgtcatgaaccgggttcgaacccgggacctcgtagttgtgtgtgagtttaatttca 47960979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 10626513 - 10626451
Alignment:
Q  86 gttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    |||||||||| | || ||| |||| | |||||||||||||| ||||||| |||||||||||||    
T  10626513 gttcgaacccaaaacttcatagttatatgtgagtttatttttagtggatcaccacttcatcta 10626451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 23036244 - 23036208
Alignment:
Q  113 tgtgagtttattttcagtggattaccacttcatctaa 149  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  23036244 tgtgagtttaatttcaatggattaccacttcatctaa 23036208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 145
Target Start/End: Complemental strand, 25050061 - 25049965
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||||||||| |||| | ||||| | |||| || || |||| |  || |||| |||||| |||||||||| ||| |||||||||||| |||||    
T  25050061 aaatgccgaaattgaaaggtcagacgtcgtgacctggatttgaactcatgatctcacagttgtatgtgagtttaatttaagtggattaccatttcat 25049965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 966 - 853
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  966 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 867  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  866 aagaccaaaaaaaa 853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 14055 - 13942
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14055 caaataccgaaattgcaaggccggacgttgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 13956  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  13955 aagaccaaaaaaaa 13942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 19735 - 19622
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19735 caaataccgaaattgcaaggccggacgttgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 19636  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  19635 aagaccaaaaaaaa 19622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 3e-43; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 13203981 - 13204094
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  13203981 caaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttatgtgtgagtttattttcagtggattaccacttcatct 13204080  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  13204081 aagaccaaaaaaaa 13204094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 21018247 - 21018360
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21018247 caaatgccaaaattgcgaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 21018346  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  21018347 aagaccaaaaaaaa 21018360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 4825043 - 4824930
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||||||||||| ||||| ||||| |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  4825043 caaatgccgaaattgcaaggccggacgttgtgacccaggttcaaacccgggacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 4824944  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  4824943 aagaccaaaaaaaa 4824930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 35317801 - 35317688
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||| ||||||||  |||| ||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35317801 caaatgccgaaattgcaaggtcggacgttatgacctggggtcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 35317702  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  35317701 aagaccaaaaaaaa 35317688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 31909486 - 31909376
Alignment:
Q  51 atgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaag 150  Q
    |||| |||||||||||||| |||||   |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31909486 atgctgaaattgcaaggccagacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaag 31909387  T
Q  151 accaacaaaaa 161  Q
    ||||| |||||    
T  31909386 accaaaaaaaa 31909376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 12257380 - 12257493
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||| |||||| ||||||| |||| ||||||||||||  ||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  12257380 caaatgccgaaattgtaaggccagacgttgtgacctgggttcgaacccaggacctcataattgtgtgtgagtttattttcagtggattaccacttcatct 12257479  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  12257480 aagaccaaaaaaaa 12257493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 2971009 - 2971112
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    ||||| |||||||| |||| | ||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  2971009 aaatgtcgaaattgtaaggtcagacgttgtgacccgggttcgaacctgagacctcacagttgtgtgtgagtttattttcggtggattaccacttcatcta 2971108  T
Q  149 agac 152  Q
    ||||    
T  2971109 agac 2971112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 49 - 155
Target Start/End: Original strand, 29265900 - 29266006
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    ||||| ||||||| ||||| || | |||| ||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29265900 aaatgtcgaaattacaaggtcgaatgttgtgacccggattcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatcta 29265999  T
Q  149 agaccaa 155  Q
    |||||||    
T  29266000 agaccaa 29266006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 6021016 - 6021117
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||| | ||||||||||||| ||||||| ||||||| |||||||||| ||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  6021016 caaatgtcaaaattgcaaggcctgacgttgtgacccggattcgaacccgggacctctcagttgtgtgtgagtttattttcagtggattaccactttatct 6021115  T
Q  148 aa 149  Q
    ||    
T  6021116 aa 6021117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 40177646 - 40177749
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||| ||||||||||||||||||||||| |||| || ||| ||||||  || |||  |||||||||||||||||||||||||||||||||||||||    
T  40177646 gacaaatgtcgaaattgcaaggccggacgttgtgacctggattccaacccggaacttcaccgttgtgtgtgagtttattttcagtggattaccacttcat 40177745  T
Q  146 ctaa 149  Q
    ||||    
T  40177746 ctaa 40177749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 48 - 149
Target Start/End: Complemental strand, 1191644 - 1191543
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||| ||||||||||||||||||||| | || ||||||||||||||| ||||||| | ||||||||||||||| ||||||||| |||| |||||||||    
T  1191644 caaatgacgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacaattgtgtgtgagtttaatttcagtggcttacaacttcatct 1191545  T
Q  148 aa 149  Q
    ||    
T  1191544 aa 1191543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 21112071 - 21112180
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||| ||||||||||||| |  |||| | ||||  |||||||||| | ||||||| |||||||| |||||||||||||||||||||||||| ||||    
T  21112071 gacaaatgtcgaaattgcaaggacatacgtcgtgacctaggttcgaacctgggacctcaaagttgtgtttgagtttattttcagtggattaccacatcat 21112170  T
Q  146 ctaagaccaa 155  Q
    ||||||||||    
T  21112171 ctaagaccaa 21112180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 32143474 - 32143405
Alignment:
Q  92 acccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32143474 acccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaaaaaaaa 32143405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 143
Target Start/End: Original strand, 27721456 - 27721550
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttc 143  Q
    ||||||||||||||||| | ||||||| | |||||||||| ||||||| ||||||| |||||| ||||| |||| ||||||||||||||||||||    
T  27721456 aaatgccgaaattgcaaagtcggacgtcgtgacccgggtttgaacccgggacctcacagttgtatgtgaatttaatttcagtggattaccacttc 27721550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 8734020 - 8734134
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgag-tttattttcagtggattaccacttcatc 146  Q
    ||||||| |||||||||||||||||||| | ||||  ||||||||||||  |||||| ||||||  ||||| ||||  ||||||||||||||||||||||    
T  8734020 caaatgctgaaattgcaaggccggacgtcgtgacctaggttcgaacccggaacctcacagttgtacgtgagttttaacttcagtggattaccacttcatc 8734119  T
Q  147 taagaccaacaaaaa 161  Q
    |||||| || |||||    
T  8734120 taagacaaaaaaaaa 8734134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 46 - 152
Target Start/End: Original strand, 14270546 - 14270652
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    ||||||||||||||||| ||   ||||||| | ||||||  ||| ||||||||| |||| |||||||| | |||||||||||||||||||| ||||||||    
T  14270546 gacaaatgccgaaattgaaaaatcggacgtcgtgacccgtattccaacccgagatctcatagttgtgtttaagtttattttcagtggattatcacttcat 14270645  T
Q  146 ctaagac 152  Q
    |||||||    
T  14270646 ctaagac 14270652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 23262573 - 23262672
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    |||||||||||||||||||| ||| |||| |||    |||||||||    |||| | |||||||||||||||||||||||||||||||||||||||||||    
T  23262573 aaatgccgaaattgcaaggctggatgttgtgac----gttcgaacctagaaccttacagttgtgtgtgagtttattttcagtggattaccacttcatcta 23262668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 161
Target Start/End: Complemental strand, 28591446 - 28591341
Alignment:
Q  56 gaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaa 155  Q
    |||||||||||||||||||| | ||| ||||||| |||| || |||||| |||||||| |||||||| | ||||||| |||||||||||||| |||| ||    
T  28591446 gaaattgcaaggccggacgtagtgactcgggttcaaacctgaaacctcacagttgtgtatgagtttaatgtcagtggtttaccacttcatcttagacaaa 28591347  T
Q  156 caaaaa 161  Q
     |||||    
T  28591346 aaaaaa 28591341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 3387004 - 3386894
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccg--ag-----acctcagagttgtgtgtgagtttattttcagtggattaccac 140  Q
    |||||||||||||||||||||||||||| |  | |||||||||||||||  ||     |||||| |||||||||||| |||| |||||||||||||||||    
T  3387004 caaatgccgaaattgcaaggccggacgtcgttatccgggttcgaacccggaagtcggaacctcaaagttgtgtgtgaatttaatttcagtggattaccac 3386905  T
Q  141 ttcatctaaga 151  Q
    ||| |||||||    
T  3386904 ttcttctaaga 3386894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 17984811 - 17984731
Alignment:
Q  83 cgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaata 163  Q
    ||||||||||||||  |||||| ||||||||||||||||| ||| ||||| ||| |||||||||||| ||||| |||||||    
T  17984811 cgggttcgaacccggaacctcacagttgtgtgtgagtttaattttagtggcttatcacttcatctaaaaccaataaaaata 17984731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 152
Target Start/End: Original strand, 35545955 - 35546061
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    ||||||||||||||||||||  ||| |||| | || |||  |||||||| | ||||||| |||||| |||| ||||| ||| ||||||||| ||||||||    
T  35545955 gacaaatgccgaaattgcaaaaccgaacgtcgtgatccgaattcgaacctgggacctcacagttgtatgtgggtttaatttaagtggattatcacttcat 35546054  T
Q  146 ctaagac 152  Q
    |||||||    
T  35546055 ctaagac 35546061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 2786295 - 2786398
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||| |||| ||||||  | || |||  ||| |||| | ||||||| |||||||| |||||||| || |||||||||||||||||||||    
T  2786295 caaatgccgaaattgtaaggtcggacgccgtgatccgaattcaaacctgggacctcacagttgtgtatgagtttaatt-cagtggattaccacttcatct 2786393  T
Q  148 aagac 152  Q
    |||||    
T  2786394 aagac 2786398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 11124676 - 11124789
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||| | ||||||||||||||||||| | ||||  | |||||||||   |||||| | || | |||| ||||| ||| ||||||||||||||||||||    
T  11124676 caaatgtcaaaattgcaaggccggacgtcgtgaccttgattcgaacccagaacctcataattttatgtgggtttaatttgagtggattaccacttcatct 11124775  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  11124776 aagacaaaaaaaaa 11124789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 2755950 - 2756047
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatc 146  Q
    |||||||||||||||||||||| |||| | || || | || |||| ||||||||   ||||||||||| ||||||||| || || ||||| |||||||    
T  2755950 aaatgccgaaattgcaaggccgaacgtggtgatccagttttgaactcgagacctagcagttgtgtgtgggtttatttttagcggtttaccccttcatc 2756047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 9577065 - 9576985
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttca 128  Q
    ||||||| |||||||||||||| |||||   |||| ||||||||||||   |||||| |||||| |||||||||| |||||    
T  9577065 caaatgctgaaattgcaaggccagacgtcatgacctgggttcgaacccagaacctcacagttgtatgtgagtttaatttca 9576985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 17465170 - 17465214
Alignment:
Q  117 agtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    |||||| ||||||||||||||||||||||||||||| || |||||    
T  17465170 agtttaatttcagtggattaccacttcatctaagacaaaaaaaaa 17465214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 41580142 - 41580078
Alignment:
Q  85 ggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaa 149  Q
    |||||||| |||| |||||| ||||||||||  ||||| ||| | ||||||||||||||||||||    
T  41580142 ggttcgaatccgaaacctcacagttgtgtgtaggtttaattttaatggattaccacttcatctaa 41580078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 19181793 - 19181847
Alignment:
Q  106 agttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    ||||||||||||||||| ||||||||||||| |||||||| |||||| || |||||    
T  19181793 agttgtgtgtgagtttaatttcagtggatta-cacttcatttaagacaaaaaaaaa 19181847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 4925673 - 4925723
Alignment:
Q  111 tgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    ||||| |||||| ||||||||| ||||||||||||||||||| || |||||    
T  4925673 tgtgtaagtttaatttcagtggtttaccacttcatctaagacaaaaaaaaa 4925723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 3049159 - 3049094
Alignment:
Q  47 acaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtg 112  Q
    ||||||||| ||||||||||||||||||  | ||||||  ||| |||||| ||||||| |||||||    
T  3049159 acaaatgccaaaattgcaaggccggacgccgtgacccgatttcaaacccgggacctcacagttgtg 3049094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 30127919 - 30127960
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcg 90  Q
    ||||||||||||||||||||||||| | | ||||||||||||    
T  30127919 aaatgccgaaattgcaaggccggacatcgtgacccgggttcg 30127960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 3e-43; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 7824558 - 7824445
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7824558 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 7824459  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  7824458 aagaccaaaaaaaa 7824445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 43247754 - 43247641
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43247754 caaatgccaaaattgcaaggccggacgttgtgacctgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 43247655  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  43247654 aagaccaaaaaaaa 43247641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 29689586 - 29689471
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29689586 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 29689487  T
Q  148 aagaccaacaaaaata 163  Q
    |||||| | |||||||    
T  29689486 aagacctaaaaaaata 29689471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 54151785 - 54151672
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  54151785 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtatgagtttattttcagtggattaccacttcatct 54151686  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  54151685 aagaccaaaaaaaa 54151672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 46 - 161
Target Start/End: Original strand, 28844526 - 28844642
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagttta-ttttcagtggattaccacttca 144  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |  |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  28844526 gacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacctggaacctcacagttgtgtgtgagtttatttttcagtggattaccacttca 28844625  T
Q  145 tctaagaccaacaaaaa 161  Q
    ||||||||||| |||||    
T  28844626 tctaagaccaaaaaaaa 28844642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 3113099 - 3112986
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||||||||| |  ||||| ||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||    
T  3113099 caaatgccgaaattgcaaggccggacgtcgtaacccgagttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 3113000  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  3112999 aagaccaaaaaaaa 3112986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 9349780 - 9349667
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||| ||||||| | || ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9349780 caaatgccgaaattgcaaggtcggacgtcgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 9349681  T
Q  148 aagaccaacaaaaa 161  Q
    || ||||| |||||    
T  9349680 aacaccaaaaaaaa 9349667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 36229098 - 36228985
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   || ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  36229098 caaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 36228999  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  36228998 aagaccaaaaaaaa 36228985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 51666029 - 51665916
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||| ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  51666029 caaatgccgaaattgcaaggccggacgtcatgacctgggttcgaacccgggaccttacagttgtgtgtgagtttattttcagtggattaccacttcatct 51665930  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  51665929 aagaccaaaaaaaa 51665916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 54158290 - 54158395
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   || ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  54158290 caaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 54158389  T
Q  148 aagacc 153  Q
    ||||||    
T  54158390 aagacc 54158395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 4601449 - 4601562
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||| |||||||    
T  4601449 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcagtggattaccagttcatct 4601548  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  4601549 aagacaaaaaaaaa 4601562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 48 - 146
Target Start/End: Complemental strand, 55018138 - 55018040
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatc 146  Q
    |||||| | ||||||||||||||||||| | |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  55018138 caaatgtcaaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatc 55018040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 52500862 - 52500975
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||| |||||||| ||||||||||||   || ||||||||||||| || |||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  52500862 caaatgtcgaaattgtaaggccggacgtcatgatccgggttcgaacctgaaacctcacagttgtgtgtgagtttattttcagtagattaccacttcatct 52500961  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  52500962 aagaccaaaaaaaa 52500975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 1778873 - 1778977
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| | |||||| ||| |||||||||| ||||||||||||||||    
T  1778873 gacaaatgccgaaattgcaaggccggacattgtgacccgggttcgaacccggaacctcacaattgtgtttgaatttattttcaatggattaccacttcat 1778972  T
Q  146 ctaag 150  Q
    |||||    
T  1778973 ctaag 1778977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 42392909 - 42392796
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||| |||||||   || ||||| ||||||||| ||||||| | ||||||||||||||| ||||||||| ||||||||||||||    
T  42392909 caaatgccgaaattgcaaggtcggacgtcatgatccgggctcgaacccgggacctcacaattgtgtgtgagtttaatttcagtggtttaccacttcatct 42392810  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  42392809 aagaccaaaaaaaa 42392796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 35461583 - 35461480
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||||  |||||| |||||||||||||||||||||| || ||||| || |||||||    
T  35461583 caaatgccgaaattgcaaggtcggacgttgtgatccgggttcgaacccggaacctcacagttgtgtgtgagtttattttctgtagattatcatttcatct 35461484  T
Q  148 aaga 151  Q
    ||||    
T  35461483 aaga 35461480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 33334632 - 33334745
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||| ||||||||||| |||| | ||||||| ||| ||||||| ||||||||||||||||| ||||||| ||||| |||||||| |    
T  33334632 caaatgccgaaattgcaaagccggacgttgtgacctgagttcgaatccgggacctcacagttgtgtgtgagtttaatttcagtagattatcacttcatat 33334731  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  33334732 aagacaaaaaaaaa 33334745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 29750645 - 29750749
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||| |||||| | ||||||| |||||||  ||||||||| | ||||| ||||| |||  |||||||||||||||||||||||    
T  29750645 caaatgccgaaattgcaaggctggacgtcgtgacccggattcgaactagagacctcacatttgtgcgtgag-ttaaattcagtggattaccacttcatct 29750743  T
Q  148 aagacc 153  Q
    ||||||    
T  29750744 aagacc 29750749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 38257400 - 38257304
Alignment:
Q  55 cgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 151  Q
    ||||||||||||| ||||||| | |||| ||||||||||||   |||||| | ||||||||||||||| |||||| |||||||||||||||||||||    
T  38257400 cgaaattgcaaggtcggacgtcgtgacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagcggattaccacttcatctaaga 38257304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 7958627 - 7958706
Alignment:
Q  82 ccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    ||||||||||||||| ||||||| |||| ||||| |||||||||| |||||||||||||||||||||| ||||| |||||    
T  7958627 ccgggttcgaacccgggacctcacagttatgtgtaagtttatttttagtggattaccacttcatctaataccaaaaaaaa 7958706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 55320454 - 55320391
Alignment:
Q  98 gacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  55320454 gacctcatagttgtgtgtgagtttattttcagtggattaccacttcatctaagacaaaaaaaaa 55320391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 41377608 - 41377716
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||| |||||| ||||||||||||   || || |||||||||||| |||||||      ||||||||||||||||||| |||||||||||||||||    
T  41377608 caaatgccaaaattgtaaggccggacgtcatgatccaggttcgaacccgggacctcac-----tgtgtgagtttattttcagcggattaccacttcatct 41377702  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  41377703 aagaccaaaaaaaa 41377716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 475383 - 475272
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    |||||| |||||||||||| |||||||   || |||||||||||| ||  |||||| |||||||||||||||||  ||||||| ||||||||||||||||    
T  475383 aaatgctgaaattgcaaggtcggacgtcatgatccgggttcgaactcggaacctcacagttgtgtgtgagttta-attcagtgaattaccacttcatcta 475285  T
Q  149 agaccaacaaaaa 161  Q
    |||| || |||||    
T  475284 agactaaaaaaaa 475272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 32001527 - 32001415
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    |||||||||||||| ||||||| || |   || || ||||||||| ||||| |||| ||||||||||||||||||||||||||  |||||||||||| ||    
T  32001527 aaatgccgaaattgtaaggccgaacatcttgaaccaggttcgaactcgagatctcacagttgtgtgtgagtttattttcagtgatttaccacttcatata 32001428  T
Q  149 agaccaacaaaaa 161  Q
    |||| || |||||    
T  32001427 agacaaaaaaaaa 32001415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 43775247 - 43775351
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||| |||| ||||||||| |||  | ||||||| |||  | |||| |||||| | |||||||| ||||||||||||||||||||||||    
T  43775247 caaatgccgaaattgtaaggtcggacgttgtgacttgcgttcgaatccggaatctcacagttgtatttgagtttaatttcagtggattaccacttcatct 43775346  T
Q  148 aagac 152  Q
    |||||    
T  43775347 aagac 43775351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 40756831 - 40756728
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttga-gacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||| ||||||||||| | |||| | | || |||| |||||||||||||||||| ||||| ||||||||||| ||||||| | ||||||||||||||    
T  40756831 aaatgccaaaattgcaaggtcagacgatcatgatccggattcgaacccgagacctcacagttgcgtgtgagtttaatttcagtagtttaccacttcatct 40756732  T
Q  148 aaga 151  Q
    ||||    
T  40756731 aaga 40756728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 58 - 152
Target Start/End: Complemental strand, 47635099 - 47635005
Alignment:
Q  58 aattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 152  Q
    |||||||||| ||||| ||| |||| ||||||||| ||  ||||||  |||| ||||| |||||| ||||||| |||||||||||||||||||||    
T  47635099 aattgcaaggtcggacattgtgacctgggttcgaatccaggacctcgcagttatgtgtaagtttaatttcagttgattaccacttcatctaagac 47635005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 8151373 - 8151471
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||| |||||||||| | || |||| | || |||||||||||||||||| |||| |||| ||||| |||||| ||||| |||||||||  |||||||    
T  8151373 aaatgctgaaattgcaaagacgaacgtcgtgatccgggttcgaacccgagatctcacagttatgtgtcagtttaatttcaatggattaccggttcatct 8151471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 46 - 152
Target Start/End: Original strand, 50729546 - 50729652
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    ||||||||||||||||| |||| | ||||| | || | || |||||||  ||||||||  |||| | |||||||||| ||||| | ||||||||||||||    
T  50729546 gacaaatgccgaaattgtaaggtcagacgtcgtgatctggattcgaacatgagacctcgcagttttatgtgagtttaatttcaatagattaccacttcat 50729645  T
Q  146 ctaagac 152  Q
    |||||||    
T  50729646 ctaagac 50729652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 46 - 152
Target Start/End: Complemental strand, 50783303 - 50783197
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    ||||||||||||||||| |||| | ||||| | || | || |||||||  ||||||||  |||| | |||||||||| ||||| | ||||||||||||||    
T  50783303 gacaaatgccgaaattgtaaggtcagacgtcgtgatctggattcgaacatgagacctcgcagttttatgtgagtttaatttcaatagattaccacttcat 50783204  T
Q  146 ctaagac 152  Q
    |||||||    
T  50783203 ctaagac 50783197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 46 - 152
Target Start/End: Original strand, 51054723 - 51054829
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||| ||||||| ||||| || |||||  ||  ||||||||||| | | |||||| | |||| ||| |||||| ||| ||||||||||||||||||    
T  51054723 gacaaatgtcgaaattacaaggtcgaacgttatgattcgggttcgaactcaaaacctcataattgtttgtaagtttaatttaagtggattaccacttcat 51054822  T
Q  146 ctaagac 152  Q
    |||||||    
T  51054823 ctaagac 51054829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 448981 - 448884
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttc 143  Q
    |||||||| | |||||| |||||||||||| | || |||  ||||||||   ||||||| |||||| |||||||||| ||| ||||||||||||||||    
T  448981 gacaaatgtcaaaattgtaaggccggacgtcgtgatccgaattcgaacctaggacctcacagttgtttgtgagtttaattttagtggattaccacttc 448884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 161
Target Start/End: Complemental strand, 2590847 - 2590801
Alignment:
Q  115 tgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    |||||||| ||||||||||||||||||||||||||||| || |||||    
T  2590847 tgagtttaatttcagtggattaccacttcatctaagacaaaaaaaaa 2590801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 53182757 - 53182858
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||| |||||||||||| | ||||||| || |||| || ||||  || |||||| | || |||||||||||| ||| || || ||||||||||||||    
T  53182757 caaatgctgaaattgcaaggtcagacgttgtgatccggatttgaacatgatacctcacaattatgtgtgagtttaattttaggggtttaccacttcatct 53182856  T
Q  148 aa 149  Q
    ||    
T  53182857 aa 53182858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 27230692 - 27230794
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    |||||| |||||||||||||| ||| | | |||| || ||| ||| || ||  ||| |||||||||||| |||| |||||||| |||||||||||||||     
T  27230692 aaatgctgaaattgcaaggccagacatcgtgacctggattcaaactcgggat-tcacagttgtgtgtgaatttaatttcagtgaattaccacttcatctc 27230790  T
Q  149 agac 152  Q
    ||||    
T  27230791 agac 27230794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 8137736 - 8137633
Alignment:
Q  47 acaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatc 146  Q
    ||||||||  ||||||||||| |||||||   |||||| ||| ||| | || |||||| |||||||||  |||||| ||||| ||| ||||||||| |||    
T  8137736 acaaatgcaaaaattgcaaggtcggacgtcatgacccgagtttgaatctgaaacctcacagttgtgtg--agtttaatttcaatggcttaccactttatc 8137639  T
Q  147 taagac 152  Q
    ||||||    
T  8137638 taagac 8137633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 10077 - 9965
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||||||||| |  ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10077 caaatgccgaaattgcaaggccggacgtcgtaacccgggttcgaacccgggacctcatagttgtgtgtgagtttattttcagtggattaccacttcatct 9978  T
Q  148 aagaccaacaaaa 160  Q
    |||||||| ||||    
T  9977 aagaccaaaaaaa 9965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 7e-41; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 33704240 - 33704353
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  33704240 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcattt 33704339  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  33704340 aagaccaaaaaaaa 33704353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 33621518 - 33621631
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  33621518 caaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatct 33621617  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  33621618 aagaccaaaaaaaa 33621631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 21037315 - 21037427
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||| |||||||||||||||||||||| ||| |||||||||| ||| ||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  21037315 caaatgctgaaattgcaaggccggacgttgtgactcgggttcgaatccg-gacctcacagttgtgtgtgagtttattttcagtgaattaccacttcatct 21037413  T
Q  148 aagaccaacaaaaa 161  Q
    |||||||| |||||    
T  21037414 aagaccaaaaaaaa 21037427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 46 - 161
Target Start/End: Original strand, 4464149 - 4464264
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    ||||||||||||||||||||||||||||||   || ||||||||||||| | ||||||| ||||||||||||||||| ||||||||| ||||||||||||    
T  4464149 gacaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacctgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcat 4464248  T
Q  146 ctaagaccaacaaaaa 161  Q
    |||||||||| |||||    
T  4464249 ctaagaccaaaaaaaa 4464264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 28322956 - 28323069
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||| ||||||||||||   || ||||||||||||||| ||||||| | ||||||||||||||| ||||||||| ||||||||||||||    
T  28322956 caaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagtttagtttcagtggtttaccacttcatct 28323055  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  28323056 aagacaaaaaaaaa 28323069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 2959173 - 2959286
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||||||||  | | |||   |||||||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||||||    
T  2959173 caaatgccgaaattgcaaggccggatatcgtgacttaggttcgaacccgagacctcacagttgtgtgtgagtttaatttccgtggaataccacttcatct 2959272  T
Q  148 aagaccaacaaaaa 161  Q
     ||||||| |||||    
T  2959273 tagaccaaaaaaaa 2959286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 16518448 - 16518558
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    ||||||| ||||||||||| ||||||||| |||| ||||||||||||  || |||| |||||||  ||||||||||||||||||||||||| ||||||||    
T  16518448 aaatgccaaaattgcaaggtcggacgttgtgacctgggttcgaacccaggagctcacagttgtg--tgagtttattttcagtggattaccatttcatcta 16518545  T
Q  149 agaccaacaaaaa 161  Q
    |||| || |||||    
T  16518546 agacaaaaaaaaa 16518558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 19145495 - 19145607
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||| |||||||||||||||||||| | ||||||  || ||||||| ||||||| | |||||||||| |||| ||||||||||||||||||||||||    
T  19145495 caaatgctgaaattgcaaggccggacgtcgtgacccgtttt-gaacccgggacctcacaattgtgtgtgaatttaatttcagtggattaccacttcatct 19145593  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  19145594 aagacaaaaaaaaa 19145607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 21000716 - 21000829
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||||||| ||||   |||| ||||||||||||| ||||||| | ||||||||| ||||| ||||||||| ||||||||||||||    
T  21000716 caaatgccgaaattgcaaggccgtacgtcatgacctgggttcgaacccgggacctcacaattgtgtgtgggtttaatttcagtggtttaccacttcatct 21000815  T
Q  148 aagaccaacaaaaa 161  Q
     |||| || |||||    
T  21000816 gagacaaaaaaaaa 21000829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 44 - 161
Target Start/End: Complemental strand, 29009758 - 29009641
Alignment:
Q  44 cggacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttc 143  Q
    ||||||||||| ||| ||| ||||||||||||   ||||||  |||||||| | ||||||| ||||||||||||||||||||| |||| |||||||||||    
T  29009758 cggacaaatgctgaagttgtaaggccggacgtcatgacccgaattcgaacctgggacctcacagttgtgtgtgagtttatttttagtgaattaccacttc 29009659  T
Q  144 atctaagaccaacaaaaa 161  Q
    ||||||||| || |||||    
T  29009658 atctaagacaaaaaaaaa 29009641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 35218700 - 35218631
Alignment:
Q  92 acccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35218700 acccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaaaaaaaa 35218631  T

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Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 152
Target Start/End: Complemental strand, 24619185 - 24619079
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||| | |||||| ||||||| |||| | |||||| |||||| |||| ||||||| | ||||||||||||||| ||||||| ||||||||||||||    
T  24619185 gacaaatgtcaaaattgtaaggccgaacgtcgtgacccgagttcgatcccgtgacctcataattgtgtgtgagtttaatttcagtcgattaccacttcat 24619086  T
Q  146 ctaagac 152  Q
    |||||||    
T  24619085 ctaagac 24619079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 361035 - 361148
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||| |||||||||||||| || | | ||| ||||||||||||||  |||||| |||| | |||||||||| ||||||||||||| ||||||||||    
T  361035 caaatgccaaaattgcaaggccgaacatcgtgacacgggttcgaacccggaacctcacagttatatgtgagtttaatttcagtggattaacacttcatct 361134  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  361135 aagacaaaaaaaaa 361148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 32289370 - 32289473
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||||||| ||||| |||| || |||  ||||||| |||||||||| |||||||||| |||||||| |||||| ||||||||||||||     
T  32289370 caaatgccgaaattgcaag-ccggatgttgtgatccgaattcgaactcgagacctcacagttgtgtgtaagtttattatcagtgaattaccacttcatca 32289468  T
Q  148 aagac 152  Q
    |||||    
T  32289469 aagac 32289473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 11572031 - 11572110
Alignment:
Q  47 acaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttatttt 126  Q
    |||||||| ||||||| |||||| ||||| | |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  11572031 acaaatgcagaaattgtaaggccagacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatttt 11572110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 151
Target Start/End: Original strand, 12252045 - 12252150
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    ||||||| |||| |||||||| ||||| || | |||| ||||| ||||||||||||||| ||||||||||||||||| ||| | ||| ||||||||||||    
T  12252045 gacaaataccgagattgcaagaccggatgtcgtgaccagggtttgaacccgagacctcatagttgtgtgtgagtttaattttaatggcttaccacttcat 12252144  T
Q  146 ctaaga 151  Q
     |||||    
T  12252145 ttaaga 12252150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 28592188 - 28592119
Alignment:
Q  92 acccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    |||| |||||||| ||||||||||||||||||||||| |||||||||| || ||||||||| || |||||    
T  28592188 acccaagacctcacagttgtgtgtgagtttattttcaatggattaccaatttatctaagacaaaaaaaaa 28592119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 584887 - 584776
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    |||||||||||||||||||| ||||||| | ||||||| ||||||  || ||||||| | || | |||||||||  |||||| ||||| ||||||||| |    
T  584887 caaatgccgaaattgcaagg-cggacgtcgtgacccggattcgaattcgggacctcacaattttatgtgagtttgatttcagaggattgccacttcatat 584789  T
Q  148 aagaccaacaaaa 160  Q
    |||||||| ||||    
T  584788 aagaccaaaaaaa 584776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 161
Target Start/End: Complemental strand, 32354046 - 32353932
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    |||||||||| |||||  |||| ||||||||| ||| ||| |||||||  | ||| ||| ||||||||||||||||||||||| | |||||||| || ||    
T  32354046 gacaaatgccaaaattcaaaggtcggacgttgtgactcggattcgaactgg-gacttcacagttgtgtgtgagtttattttcaattgattaccattttat 32353948  T
Q  146 ctaagaccaacaaaaa 161  Q
    ||||||| || |||||    
T  32353947 ctaagacaaaaaaaaa 32353932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 46 - 144
Target Start/End: Complemental strand, 10999514 - 10999416
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttca 144  Q
    |||||||||||||| ||||||| ||||||  | || || ||| |||| || | | |||| |||||| |||||||||| |||||||||||||||||||||    
T  10999514 gacaaatgccgaaactgcaaggtcggacgaagtgatccaggtacgaatccaaaatctcacagttgtatgtgagtttaatttcagtggattaccacttca 10999416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 7014380 - 7014313
Alignment:
Q  82 ccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaa 149  Q
    |||| ||||||||||| |||||| | || | |||||||||| |||||||| |||||||||||||||||    
T  7014380 ccggattcgaacccgaaacctcataattttatgtgagtttaatttcagtgtattaccacttcatctaa 7014313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 11456047 - 11456101
Alignment:
Q  98 gacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 152  Q
    ||||||| | ||||||||||||||||||  ||| |||||||||||||||||||||    
T  11456047 gacctcataattgtgtgtgagtttatttctagtcgattaccacttcatctaagac 11456101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 22576244 - 22576318
Alignment:
Q  87 ttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    ||||||||||  |||||| |||| |||||||||||  ||||| || ||||||||||| |||||||| || |||||    
T  22576244 ttcgaacccggaacctcacagttatgtgtgagtttgatttcattgtattaccacttcttctaagacaaaaaaaaa 22576318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 46 - 152
Target Start/End: Original strand, 22185 - 22291
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcat 145  Q
    ||||||||||||||||| |||||||||||| | ||||||||||||| |||| ||||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  22185 gacaaatgccgaaattgtaaggccggacgtcgtgacccgggttcgagcccgggacctcacagttgcgtgtgagtttaatttcagtggattaccacttcat 22284  T
Q  146 ctaagac 152  Q
    |||||||    
T  22285 ctaagac 22291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 114276 - 114389
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatct 147  Q
    ||||||||||||||| ||||||||||||   || ||||||||||||||| ||||||| | ||||||||||||||| ||||||||| ||||||||||||||    
T  114276 caaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagtttagtttcagtggtttaccacttcatct 114375  T
Q  148 aagaccaacaaaaa 161  Q
    ||||| || |||||    
T  114376 aagacaaaaaaaaa 114389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 34842 - 34956
Alignment:
Q  48 caaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagttt-attttcagtggattaccacttcatc 146  Q
    |||||||||||||||||||||||||||| | |||  ||||||||| ||  ||||||  |||||| ||||||||| | |||||||||||||||||||||||    
T  34842 caaatgccgaaattgcaaggccggacgtcgtgacatgggttcgaatccaggacctcgcagttgtatgtgagttttaatttcagtggattaccacttcatc 34941  T
Q  147 taagaccaacaaaaa 161  Q
    ||||||||| |||||    
T  34942 taagaccaaaaaaaa 34956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 9046 - 8934
Alignment:
Q  49 aaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacctcagagttgtgtgtgagtttattttcagtggattaccacttcatcta 148  Q
    |||||||||||||| ||||| |||||||  ||  ||||||||||||   ||||||| ||||||||||||||||| ||||||||  |||||||||||||||    
T  9046 aaatgccgaaattgtaaggcgggacgttatgattcgggttcgaacctaggacctcacagttgtgtgtgagtttaatttcagtgatttaccacttcatcta 8947  T
Q  149 agaccaacaaaaa 161  Q
    |||| || |||||    
T  8946 agacaaaaaaaaa 8934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 151
Target Start/End: Original strand, 14517 - 14632
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgttgagacccgggttcgaacccgagacct--cagagt--------tgtgtgtgagtttattttcagtggatt 135  Q
    |||||||| ||||||||||||||||||||| | || ||||||||||||||| |||||  ||||||        |||||||||||||| ||||||||||||    
T  14517 gacaaatgtcgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacagagtcacagatgtgtgtgtgagtttaatttcagtggatt 14616  T
Q  136 accacttcatctaaga 151  Q
    ||||||| ||||||||    
T  14617 accacttaatctaaga 14632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 4413 - 4455
Alignment:
Q  119 tttattttcagtggattaccacttcatctaagaccaacaaaaa 161  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  4413 tttattttcagtggattaccacttcatctaagaccaaaaaaaa 4455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 75
Target Start/End: Original strand, 50006 - 50035
Alignment:
Q  46 gacaaatgccgaaattgcaaggccggacgt 75  Q
    ||||||||||||||||||||||||||||||    
T  50006 gacaaatgccgaaattgcaaggccggacgt 50035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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