View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14231_low_15 (Length: 501)
Name: NF14231_low_15
Description: NF14231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14231_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 377; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 1 - 481
Target Start/End: Original strand, 6491686 - 6492177
Alignment:
| Q |
1 |
tgcataaacaaccttagccctatgaaaactcgtaatttaaaattaatttcagactaatgtttctagctatggaactccaaattcactgagcaaaattgtt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
6491686 |
tgcataaacaaccttagccctatgaaaactcgtaatttaaaattaatttcagactaatgtttctagcaatggaactccaaattcactgagcaaaattgtt |
6491785 |
T |
|
| Q |
101 |
agaatttgatagctatgataatcaagctcacattcacttttgttgaaataacagtccagggcaagattaattgcattcatgagtgcgcttgccactgctg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
6491786 |
agaatttgatagctatgataatcaagctcacattcacttttgtttaaataacagtccagggcaagattaattgcattcatgagtacgcttgccactgctg |
6491885 |
T |
|
| Q |
201 |
ccactaaacctttctcgactttgatcacaacttaccttaacttctgtcttctcatgatgagcactgataaataagatttatttgtgtcatctctgggaaa |
300 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||| |
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| T |
6491886 |
ccactaaacctttctcgactttgatcacaacttaccttaacttctgtcatctcatgatgagcactgataaataagattaatttgtttcatctctgggaaa |
6491985 |
T |
|
| Q |
301 |
gaaagatacaannnnnnnncccaagttgtttctccttagcaaagtttctttaagaaaaaatagatttaattttagnnnnnnncactgtattttaatgctt |
400 |
Q |
| |
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||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
6491986 |
gaaagatacaattttttttcccaagttatttctccttagcaaagtttctttaagaaaaaatagatttaattttagtttttttcactgtattttaatgctt |
6492085 |
T |
|
| Q |
401 |
tctgttatcccaagaacaatgacacaaaaaggtaggtgttact-----------gtaggatttgtctagttatataattaaatactcatttt |
481 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
6492086 |
tctgttatcccaagaacaatgacacaaaaaggtatgtgttactgattatatctagtaggatttgtctagttatataattaaatactcatttt |
6492177 |
T |
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