View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14231_low_21 (Length: 429)

Name: NF14231_low_21
Description: NF14231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14231_low_21
NF14231_low_21
[»] chr4 (49 HSPs)
chr4 (12-411)||(2813001-2813393)
chr4 (149-243)||(16408601-16408694)
chr4 (147-242)||(20225119-20225213)
chr4 (149-243)||(23501831-23501924)
chr4 (149-243)||(11054148-11054239)
chr4 (149-243)||(20639658-20639750)
chr4 (149-240)||(25629096-25629184)
chr4 (144-243)||(48598820-48598916)
chr4 (149-243)||(20225026-20225117)
chr4 (149-243)||(47528530-47528621)
chr4 (149-243)||(13256399-13256492)
chr4 (169-243)||(20405131-20405205)
chr4 (151-243)||(29207900-29207989)
chr4 (189-241)||(16911608-16911660)
chr4 (152-240)||(21647011-21647098)
chr4 (147-243)||(44363128-44363223)
chr4 (149-243)||(30639423-30639514)
chr4 (148-243)||(48327762-48327856)
chr4 (149-243)||(54175107-54175200)
chr4 (149-236)||(54730301-54730387)
chr4 (149-226)||(33836487-33836563)
chr4 (149-243)||(5648302-5648393)
chr4 (149-243)||(9832313-9832404)
chr4 (149-243)||(47444001-47444092)
chr4 (150-243)||(6430627-6430717)
chr4 (149-231)||(30352580-30352661)
chr4 (169-243)||(30581484-30581557)
chr4 (150-243)||(40915872-40915962)
chr4 (148-243)||(30690175-30690267)
chr4 (148-215)||(38755907-38755973)
chr4 (149-243)||(51865038-51865129)
chr4 (169-242)||(17043413-17043484)
chr4 (158-243)||(19027892-19027974)
chr4 (149-211)||(32484307-32484368)
chr4 (150-244)||(8473621-8473714)
chr4 (169-238)||(20908655-20908723)
chr4 (170-243)||(21489131-21489203)
chr4 (149-241)||(5306660-5306753)
chr4 (149-236)||(10277757-10277841)
chr4 (152-240)||(10660451-10660538)
chr4 (152-240)||(10874596-10874683)
chr4 (149-212)||(38786682-38786744)
chr4 (149-243)||(55766466-55766557)
chr4 (159-240)||(9987844-9987922)
chr4 (169-243)||(39029079-39029152)
chr4 (170-230)||(25463179-25463237)
chr4 (171-243)||(49796841-49796911)
chr4 (195-243)||(25343231-25343279)
chr4 (191-243)||(35894502-35894553)
[»] chr3 (40 HSPs)
chr3 (149-243)||(46421034-46421128)
chr3 (149-243)||(13628790-13628883)
chr3 (149-243)||(29366720-29366813)
chr3 (151-243)||(353351-353442)
chr3 (149-243)||(13730602-13730695)
chr3 (149-243)||(14987023-14987116)
chr3 (149-243)||(49013473-49013566)
chr3 (151-243)||(8247688-8247780)
chr3 (149-243)||(15797286-15797377)
chr3 (148-243)||(39203580-39203672)
chr3 (147-243)||(45786212-45786307)
chr3 (149-243)||(40272812-40272903)
chr3 (149-243)||(1217154-1217245)
chr3 (149-243)||(26869772-26869863)
chr3 (149-243)||(31592913-31593004)
chr3 (149-243)||(34771364-34771455)
chr3 (149-243)||(54484757-54484848)
chr3 (148-242)||(10795422-10795515)
chr3 (150-243)||(22122918-22123008)
chr3 (150-243)||(22609831-22609921)
chr3 (169-243)||(34420662-34420735)
chr3 (169-240)||(54374364-54374434)
chr3 (169-243)||(9607269-9607343)
chr3 (149-243)||(53996565-53996657)
chr3 (149-224)||(5173719-5173793)
chr3 (149-243)||(12914035-12914126)
chr3 (189-243)||(47624107-47624159)
chr3 (190-243)||(16735506-16735557)
chr3 (169-243)||(33926148-33926221)
chr3 (189-242)||(45139515-45139568)
chr3 (149-237)||(52926219-52926304)
chr3 (170-243)||(55401242-55401314)
chr3 (160-243)||(6411833-6411913)
chr3 (149-243)||(516475-516569)
chr3 (169-243)||(7943056-7943128)
chr3 (149-212)||(24851301-24851363)
chr3 (189-243)||(26573193-26573245)
chr3 (169-227)||(25944551-25944608)
chr3 (159-240)||(45948848-45948926)
chr3 (149-210)||(30452892-30452952)
[»] chr6 (21 HSPs)
chr6 (149-243)||(12221914-12222008)
chr6 (149-243)||(29355855-29355948)
chr6 (149-230)||(2166410-2166490)
chr6 (149-230)||(2178043-2178123)
chr6 (149-243)||(1347006-1347097)
chr6 (149-243)||(1354757-1354848)
chr6 (149-230)||(12892064-12892144)
chr6 (140-243)||(25557767-25557867)
chr6 (149-231)||(12885967-12886048)
chr6 (149-233)||(3116129-3116212)
chr6 (169-241)||(7947390-7947461)
chr6 (140-243)||(26097202-26097302)
chr6 (189-243)||(6024277-6024331)
chr6 (149-243)||(9161166-9161259)
chr6 (153-224)||(14975094-14975164)
chr6 (169-238)||(32579474-32579541)
chr6 (144-213)||(6808467-6808535)
chr6 (147-226)||(16895694-16895774)
chr6 (147-226)||(16915983-16916063)
chr6 (159-238)||(3815087-3815163)
chr6 (191-243)||(24734686-24734738)
[»] chr5 (28 HSPs)
chr5 (149-243)||(38879625-38879718)
chr5 (147-243)||(13801765-13801860)
chr5 (149-243)||(4619104-4619197)
chr5 (153-243)||(27328796-27328885)
chr5 (152-243)||(7368440-7368528)
chr5 (149-243)||(8169984-8170075)
chr5 (149-243)||(32703466-32703557)
chr5 (149-243)||(43334247-43334339)
chr5 (150-243)||(20135648-20135740)
chr5 (149-221)||(25622524-25622595)
chr5 (147-241)||(34154812-34154903)
chr5 (149-243)||(41014362-41014453)
chr5 (146-243)||(16880644-16880738)
chr5 (149-240)||(24448937-24449025)
chr5 (149-240)||(35710358-35710446)
chr5 (148-236)||(1565483-1565567)
chr5 (150-240)||(12006329-12006418)
chr5 (149-227)||(16957374-16957449)
chr5 (169-243)||(19142962-19143034)
chr5 (169-243)||(43574650-43574722)
chr5 (149-243)||(29334439-29334531)
chr5 (148-214)||(30877563-30877628)
chr5 (149-243)||(3771383-3771474)
chr5 (191-236)||(12477161-12477205)
chr5 (194-243)||(42924876-42924925)
chr5 (169-225)||(10306493-10306548)
chr5 (149-209)||(16028624-16028683)
chr5 (187-227)||(39079788-39079827)
[»] chr1 (41 HSPs)
chr1 (149-243)||(18944710-18944804)
chr1 (144-243)||(42304202-42304300)
chr1 (149-243)||(30395726-30395819)
chr1 (149-243)||(35253187-35253278)
chr1 (149-243)||(20004090-20004183)
chr1 (148-243)||(4349705-4349797)
chr1 (149-243)||(38478282-38478373)
chr1 (149-243)||(46247953-46248044)
chr1 (149-243)||(10668292-10668385)
chr1 (169-243)||(27201714-27201788)
chr1 (149-243)||(35005190-35005283)
chr1 (149-243)||(34725098-34725189)
chr1 (149-224)||(50606487-50606561)
chr1 (149-243)||(18741957-18742050)
chr1 (189-243)||(19932792-19932846)
chr1 (152-243)||(46991871-46991959)
chr1 (149-243)||(19414504-19414595)
chr1 (159-243)||(10378745-10378826)
chr1 (149-245)||(14617103-14617196)
chr1 (170-242)||(15505632-15505702)
chr1 (172-243)||(12126859-12126928)
chr1 (149-212)||(27474376-27474438)
chr1 (169-243)||(31382233-31382305)
chr1 (149-243)||(41319806-41319897)
chr1 (149-243)||(47214576-47214667)
chr1 (170-243)||(18724565-18724636)
chr1 (154-243)||(23768325-23768411)
chr1 (190-243)||(31442429-31442481)
chr1 (171-243)||(32632578-32632648)
chr1 (189-242)||(35117805-35117858)
chr1 (189-240)||(20036291-20036340)
chr1 (152-231)||(45402175-45402251)
chr1 (149-240)||(2435786-2435875)
chr1 (149-243)||(43768206-43768297)
chr1 (170-243)||(11596579-11596650)
chr1 (193-243)||(22324959-22325009)
chr1 (205-243)||(46859133-46859170)
chr1 (214-243)||(4430088-4430117)
chr1 (170-238)||(44485129-44485195)
chr1 (149-236)||(1517311-1517395)
chr1 (153-240)||(45812541-45812625)
[»] chr8 (36 HSPs)
chr8 (147-243)||(16225063-16225158)
chr8 (149-243)||(20869967-20870060)
chr8 (149-241)||(7136527-7136618)
chr8 (149-243)||(6760866-6760959)
chr8 (149-243)||(26954177-26954270)
chr8 (149-243)||(39460994-39461087)
chr8 (154-241)||(5689677-5689761)
chr8 (159-240)||(20284079-20284159)
chr8 (159-240)||(21070707-21070787)
chr8 (149-243)||(2626566-2626657)
chr8 (149-243)||(12625934-12626025)
chr8 (149-243)||(12670250-12670341)
chr8 (149-240)||(25250569-25250659)
chr8 (148-241)||(17823622-17823712)
chr8 (150-243)||(45071308-45071398)
chr8 (148-243)||(13160745-13160837)
chr8 (149-243)||(19729384-19729475)
chr8 (149-243)||(28817626-28817717)
chr8 (149-243)||(30454097-30454188)
chr8 (149-243)||(35261723-35261814)
chr8 (149-243)||(36720840-36720931)
chr8 (149-243)||(44530193-44530284)
chr8 (194-243)||(43942368-43942417)
chr8 (169-240)||(8897783-8897852)
chr8 (170-241)||(24365079-24365148)
chr8 (149-243)||(10857873-10857964)
chr8 (189-243)||(29877138-29877190)
chr8 (159-243)||(44742528-44742610)
chr8 (149-212)||(28407476-28407538)
chr8 (149-243)||(29521685-29521776)
chr8 (193-243)||(17250918-17250968)
chr8 (149-226)||(26102578-26102652)
chr8 (149-240)||(5135290-5135377)
chr8 (149-230)||(16013511-16013591)
chr8 (169-242)||(44781523-44781596)
chr8 (169-244)||(24245489-24245565)
[»] chr7 (42 HSPs)
chr7 (147-243)||(47716503-47716598)
chr7 (149-243)||(42805568-42805661)
chr7 (149-243)||(43557516-43557610)
chr7 (149-240)||(19265861-19265948)
chr7 (149-243)||(21172009-21172100)
chr7 (149-243)||(42391100-42391191)
chr7 (189-243)||(46354238-46354292)
chr7 (147-243)||(48735120-48735213)
chr7 (149-243)||(32758303-32758394)
chr7 (148-240)||(10693072-10693161)
chr7 (159-243)||(38604570-38604652)
chr7 (149-243)||(7879682-7879773)
chr7 (150-243)||(11617589-11617679)
chr7 (189-243)||(33500557-33500611)
chr7 (147-243)||(22698965-22699061)
chr7 (170-238)||(28362165-28362231)
chr7 (148-243)||(2541018-2541110)
chr7 (159-235)||(21566487-21566561)
chr7 (149-243)||(31591109-31591200)
chr7 (149-243)||(42798713-42798804)
chr7 (149-243)||(14732821-14732913)
chr7 (169-243)||(17048834-17048907)
chr7 (195-243)||(23419719-23419765)
chr7 (159-243)||(35334826-35334907)
chr7 (170-231)||(39123949-39124010)
chr7 (149-231)||(45018923-45019006)
chr7 (180-243)||(14099036-14099097)
chr7 (180-243)||(14409053-14409114)
chr7 (149-240)||(19426890-19426977)
chr7 (174-245)||(48123508-48123577)
chr7 (170-240)||(18512473-18512541)
chr7 (149-243)||(27629678-27629769)
chr7 (149-231)||(27889316-27889395)
chr7 (169-243)||(34626227-34626299)
chr7 (168-243)||(35203483-35203558)
chr7 (149-243)||(35787269-35787360)
chr7 (149-243)||(39093439-39093531)
chr7 (153-230)||(47077859-47077933)
chr7 (170-243)||(16341322-16341394)
chr7 (171-243)||(19266494-19266564)
chr7 (150-241)||(18747533-18747621)
chr7 (150-237)||(29907469-29907552)
[»] chr2 (35 HSPs)
chr2 (147-243)||(14530362-14530457)
chr2 (149-243)||(10543742-10543835)
chr2 (149-243)||(9671223-9671314)
chr2 (149-243)||(10546207-10546298)
chr2 (149-243)||(24200623-24200716)
chr2 (149-214)||(1289093-1289158)
chr2 (149-240)||(5841075-5841165)
chr2 (149-243)||(21779261-21779352)
chr2 (146-240)||(23397811-23397902)
chr2 (149-243)||(36871536-36871626)
chr2 (149-242)||(8455316-8455406)
chr2 (149-241)||(17668048-17668137)
chr2 (149-241)||(17623610-17623699)
chr2 (149-240)||(30826083-30826170)
chr2 (149-243)||(14444772-14444863)
chr2 (189-243)||(22371098-22371150)
chr2 (153-231)||(24859992-24860067)
chr2 (149-243)||(25249738-25249829)
chr2 (149-243)||(25632553-25632644)
chr2 (189-243)||(32781327-32781379)
chr2 (149-239)||(40762234-40762321)
chr2 (193-243)||(19615036-19615085)
chr2 (169-243)||(31158458-31158532)
chr2 (149-237)||(11514486-11514570)
chr2 (159-243)||(12023929-12024010)
chr2 (146-243)||(44449380-44449475)
chr2 (169-240)||(17896307-17896376)
chr2 (149-233)||(23488535-23488618)
chr2 (169-231)||(4516370-4516430)
chr2 (169-238)||(13245114-13245181)
chr2 (170-243)||(21377093-21377164)
chr2 (169-230)||(19185762-19185823)
chr2 (149-210)||(34080176-34080236)
chr2 (147-243)||(14544108-14544203)
chr2 (151-211)||(41409936-41409995)
[»] scaffold0049 (1 HSPs)
scaffold0049 (147-243)||(59021-59116)
[»] scaffold0180 (1 HSPs)
scaffold0180 (149-239)||(24133-24220)
[»] scaffold0015 (1 HSPs)
scaffold0015 (149-243)||(48634-48725)
[»] scaffold0168 (1 HSPs)
scaffold0168 (144-243)||(30621-30717)
[»] scaffold0057 (2 HSPs)
scaffold0057 (149-240)||(46878-46966)
scaffold0057 (169-243)||(24791-24863)
[»] scaffold0187 (2 HSPs)
scaffold0187 (151-243)||(10052-10141)
scaffold0187 (151-243)||(20380-20469)
[»] scaffold0311 (1 HSPs)
scaffold0311 (169-243)||(10854-10926)
[»] scaffold0258 (1 HSPs)
scaffold0258 (149-243)||(13024-13115)
[»] scaffold0254 (1 HSPs)
scaffold0254 (189-230)||(4214-4256)
[»] scaffold0223 (1 HSPs)
scaffold0223 (148-237)||(11179-11265)


Alignment Details
Target: chr4 (Bit Score: 306; Significance: 1e-172; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 12 - 411
Target Start/End: Complemental strand, 2813393 - 2813001
Alignment:
Q  12 aggagcacagagaaattgctgcagaaaaattgggaataagtgtgatgaagacgagagaagatgcgtgtgatgaagagtgaagacaatacgagataggaag 111  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||       ||| |||||||||||||    
T  2813393 aggatcacaaagaaattgctgcagaaaaattgggaataagtgtgatgaagacgagagaagatacgtgtgatgaaga-------caagacgagataggaag 2813301  T
Q  112 agagttgcacgaagttggagatgagacaagagaagataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccat 211  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| | || || |||||| |||| |||||||    
T  2813300 agagttgcacgaagttggagatgagacaagagaagacaaagggcaatccggtgcacttaaagctcccgcatacgcatcgttcgggaaagggtcccaccat 2813201  T
Q  212 tattggtgtattgtacgcagtcttaccctgttatgggacaagagaagatacgggtaataaatttatagttcgtgtgttaggtttgaaatatgatatcatg 311  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  2813200 tattgatgtattgtacgcagtcttaccctgttatgagacaagagaagatacgggtaataaatttatagttcgtgtgttagatttgaaatatgctatcatg 2813101  T
Q  312 tagctagagtcaataagagagggttagtaaatggtttagtttatcttttcttattggtgtatcaaagacggattttaatatgcgcaccaaacaatccctt 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2813100 tagctagagtcaataagagagggttagtaaatggtttagtttatcttttcttattggtgtatcaaagacggattttaatatgtgcaccaaacaatccctt 2813001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 16408601 - 16408694
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16408601 aaagggcaacccggtgcact-aaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 16408694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 20225213 - 20225119
Alignment:
Q  147 ataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgt 242  Q
    ||||||||||| |||||||||| ||||||||| ||||||   ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  20225213 ataaagggcaacccggtgcact-aaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgt 20225119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 23501924 - 23501831
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||||| | ||||||||||||||| ||||||||||||||||||||||||||  |||||||||||    
T  23501924 aaagggcaacccggtgcact-aaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgtt 23501831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 11054148 - 11054239
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | ||||||| |||||| | |||||||||||||||||| |||||  |||||||||||||||||||||||||||||    
T  11054148 aaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggttccgccatt--tggtgtattgtacgcagtcttaccctgtt 11054239  T

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Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 20639658 - 20639750
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  20639658 aaagggcaacccggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccatt-ttggtgtattgtacgcagccttaccctgtt 20639750  T

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Target: chr4; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 25629184 - 25629096
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    ||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||| |||||||  |||||||||||||| ||| ||||||||    
T  25629184 aaagggcaacccggtgcact-aaagctcccgcatatgtagggtccgggaaggggtcccaccat--ttggtgtattgtacacagccttaccct 25629096  T

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Target: chr4; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 144 - 243
Target Start/End: Original strand, 48598820 - 48598916
Alignment:
Q  144 aagataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||| ||||||||| |||||||||| | ||||||  |||||| ||||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  48598820 aagaaaaagggcaacccggtgcact-agagctccggcatatgcatggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 48598916  T

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Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 20225117 - 20225026
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  20225117 aaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 20225026  T

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Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 47528530 - 47528621
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | |||||||||||||  | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  47528530 aaagggcaacccggtgcact-agagctcccacatattcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 47528621  T

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Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 13256399 - 13256492
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| || |||   ||| ||||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  13256399 aaagggcaacccggtgcact-aaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgtt 13256492  T

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Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 20405205 - 20405131
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||| ||||||   ||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  20405205 taaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgtt 20405131  T

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Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 29207900 - 29207989
Alignment:
Q  151 agggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  29207900 agggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 29207989  T

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Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 16911660 - 16911608
Alignment:
Q  189 ggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctg 241  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  16911660 ggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 16911608  T

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Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 21647098 - 21647011
Alignment:
Q  152 gggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    |||||| |||||||||| ||||||||| ||||||   |||| |||||||||| |||||||||||||| |||||||||||| ||||||||    
T  21647098 gggcaacccggtgcact-aaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccct 21647011  T

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Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 243
Target Start/End: Original strand, 44363128 - 44363223
Alignment:
Q  147 ataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||| |||||||| ||||||  |||||||||| | |||||||||    
T  44363128 ataaagggcaacccggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgtt 44363223  T

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Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 30639514 - 30639423
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| || ||||||| ||||||||| |||||| | |||||||||||||||  |||||||  ||||||||||||||||| |||||||||||    
T  30639514 aaagggcaacccagtgcact-aaagctcccgcatatgcagggtccgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtt 30639423  T

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Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 148 - 243
Target Start/End: Original strand, 48327762 - 48327856
Alignment:
Q  148 taaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||| || |||||||||| ||| || || |||||||  ||| ||||||| ||| |||||||||||||||||||||| ||||||||||||||||    
T  48327762 taaagggtaacccggtgcactaaaa-cttccgcatatgtggggttcgggaagaggtcccaccattattggtgtattgtatgcagtcttaccctgtt 48327856  T

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Target: chr4; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 54175200 - 54175107
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccggg-aaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||  |||||||||| ||||||||| |||||| | |||||||| ||||||| |||||||| |||||||||||||||||| |||||||||||    
T  54175200 aaagggcagcccggtgcact-aaagctcccgcatatgcagggtccggggaaggggtcccaccatt-ttggtgtattgtacgcagccttaccctgtt 54175107  T

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Target: chr4; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 236
Target Start/End: Complemental strand, 54730387 - 54730301
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtctta 236  Q
    |||||| ||| ||||||||| ||||||||| |||| | | ||||||||||||||||||| ||||||||||||||| ||||||| ||||    
T  54730387 aaagggtaattcggtgcact-aaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagcctta 54730301  T

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Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 33836487 - 33836563
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgta 226  Q
    ||||||||| ||| |||||| ||||||||| |||| | | ||||||||||||||| ||||||||||||||||||||||    
T  33836487 aaagggcaacccgttgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgta 33836563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 5648393 - 5648302
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| || ||||||| || |||||| |||| | | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  5648393 aaagggcaacccagtgcactgaa-gctcccgcatacgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 5648302  T

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Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 9832313 - 9832404
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | || |||  |||||| | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  9832313 aaagggcaacccggtgcact-agagttcctgcatatgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 9832404  T

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Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 47444092 - 47444001
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| || ||||||| || |||||  |||||| | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  47444092 aaagggcaacccagtgcactgaa-gctcctgcatatgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 47444001  T

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Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 6430627 - 6430717
Alignment:
Q  150 aagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||| ||||||| || ||||||||| |||| | | ||||||||||| ||| ||||||||  ||||||||||||||||| |||||||||||    
T  6430627 aagggcaacccggtgcgct-aaagctcccgcatacgcagggtccgggaagtggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 6430717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 30352580 - 30352661
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcag 231  Q
    |||||||||  ||||||||| ||||||||| |||| | | |||||| |||||||| |||||||| ||||||||||||||||||    
T  30352580 aaagggcaacacggtgcact-aaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcag 30352661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 30581484 - 30581557
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| ||||||| | ||||||||||||||| |||||||| |||||||||||||| ||  |||||||||||    
T  30581484 taaagctcctacatatgcagggtccgggaaggggtcccaccatt-ttggtgtattgtacacacccttaccctgtt 30581557  T

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Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 40915962 - 40915872
Alignment:
Q  150 aagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||||||||||| || |||||| |||| | | ||||||||||||| | ||||||||  ||||||||||||||||| |||||| ||||    
T  40915962 aagggcaatccggtgcactgaa-gctcccgcatacgcagggtccgggaagggctcccaccatt--tggtgtattgtacgcagccttaccttgtt 40915872  T

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Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 243
Target Start/End: Original strand, 30690175 - 30690267
Alignment:
Q  148 taaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||  | |||||||| ||||||||| |||| | | ||||||||||||||| ||||||  |||||||||||||| |||| |||||||||||    
T  30690175 taaagggcagcctggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccacca--attggtgtattgtatgcagccttaccctgtt 30690267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 215
Target Start/End: Original strand, 38755907 - 38755973
Alignment:
Q  148 taaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattatt 215  Q
    |||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||| |||||||||||    
T  38755907 taaagggcaacccggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccattatt 38755973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 51865038 - 51865129
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||| ||||||||| | ||||||||| |||| | | ||||||||||||||  ||||||||  ||||||||||||||||| |||||| ||||    
T  51865038 aaagggcagtccggtgcaat-aaagctcccgcatacgcagggtccgggaaggggccccaccatt--tggtgtattgtacgcagccttaccatgtt 51865129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 242
Target Start/End: Original strand, 17043413 - 17043484
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgt 242  Q
    |||||||||  |||||| | |||| |||||||||| ||||||||  ||||||||||||||||| ||||||||||    
T  17043413 taaagctccagcatatgcagggtctgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgt 17043484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 19027974 - 19027892
Alignment:
Q  158 tccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||| |||||||||||||| | |  ||| || ||||||| ||||||  ||||||||||||||||||| |||||||||||    
T  19027974 tccggtgcact-aaagctcccacatacgcagagtctggaaaggggtcccacca--attggtgtattgtacgcagccttaccctgtt 19027892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 32484368 - 32484307
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccat 211  Q
    ||||||||| |||||||||| ||||||||| |||||| | ||||||||||||||| |||||||    
T  32484368 aaagggcaacccggtgcact-aaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 244
Target Start/End: Original strand, 8473621 - 8473714
Alignment:
Q  150 aagggcaatccggtgcacttaaagctcccacatatgtatgg-tccggg-aaggggttccaccattattggtgtattgtacgcagtcttaccctgtta 244  Q
    |||||||| |||||||||| ||||||||| |||||| | || |||||| ||||||| ||||||||  |||||||||||| |||| ||||||||||||    
T  8473621 aagggcaacccggtgcact-aaagctcccgcatatgcaggggtccggggaaggggtcccaccatt--tggtgtattgtatgcagccttaccctgtta 8473714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 20908655 - 20908723
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttacc 238  Q
    |||||||||| |||| | | ||| ||||||||||| |||||||| |||||||||||||||||| ||||||    
T  20908655 taaagctcccgcatacgcagggttcgggaaggggtcccaccatt-ttggtgtattgtacgcagccttacc 20908723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 21489203 - 21489131
Alignment:
Q  170 aaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||| | | ||| ||||||||||| |||||||| |||||| ||||||||||||||||| |||||    
T  21489203 aaagctcccgcatacgcagggttcgggaaggggtcccaccatt-ttggtgcattgtacgcagtcttactctgtt 21489131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 241
Target Start/End: Original strand, 5306660 - 5306753
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctccc----acatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctg 241  Q
    ||||||||| |||||||| |||||||||||    ||||| | | ||||||||||||||| |||||||  |||||||||||||||||  |||||||||    
T  5306660 aaagggcaacccggtgca-ttaaagctcccgtccacatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcaaccttaccctg 5306753  T

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Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 236
Target Start/End: Original strand, 10277757 - 10277841
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtctta 236  Q
    ||||||||||||||| ||||  || ||||| |||||| | |||| ||||||||||| ||||||  |||||||||||||||||| ||||    
T  10277757 aaagggcaatccggttcactagaa-ctcccgcatatgcagggtctgggaaggggtttcaccat--ttggtgtattgtacgcagcctta 10277841  T

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Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 10660538 - 10660451
Alignment:
Q  152 gggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    |||||| ||| |||||||||||||||| |||| | | ||||  |||||||||  ||||||||||||||||||||| |||| | ||||||    
T  10660538 gggcaacccgatgcacttaaagctcccgcatacgca-ggtcttggaaggggtctcaccattattggtgtattgtatgcagccataccct 10660451  T

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Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 10874683 - 10874596
Alignment:
Q  152 gggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    |||||| ||| |||||||||||||||| |||| | | ||||  |||||||||  ||||||||||||||||||||| |||| | ||||||    
T  10874683 gggcaacccgatgcacttaaagctcccgcatacgca-ggtcttggaaggggtctcaccattattggtgtattgtatgcagccataccct 10874596  T

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Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 38786744 - 38786682
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccatt 212  Q
    ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| ||||||||    
T  38786744 aaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccatt 38786682  T

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Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 55766466 - 55766557
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||  |||||||||| ||||||| | |||| | | ||||||||| ||||||||||||||    ||||||||||||||| |||||||||||    
T  55766466 aaagggcatcccggtgcact-aaagctctcgcatacgcaaggtccgggatggggttccaccattca--gtgtattgtacgcagccttaccctgtt 55766557  T

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Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 9987844 - 9987922
Alignment:
Q  159 ccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    |||||||| ||||||||||| |||||| | ||||  ||||||||| |||||||  ||||||||||||| |||| ||||||||    
T  9987844 ccggtgca-ttaaagctcccgcatatgcaaggtcaaggaaggggtcccaccat--ttggtgtattgtatgcagccttaccct 9987922  T

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Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 39029079 - 39029152
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||| |||||| | ||||||| ||| ||| |||||||| || ||||||||||| ||| |||||||||||    
T  39029079 taaagctcccgcatatgcagggtccggaaagtggtcccaccatt-ttcgtgtattgtacacagccttaccctgtt 39029152  T

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Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 25463237 - 25463179
Alignment:
Q  170 aaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgca 230  Q
    ||||||||| |||||| | ||||||||||||||| |||||||  ||||||| |||||||||    
T  25463237 aaagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtgttgtacgca 25463179  T

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Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 49796911 - 49796841
Alignment:
Q  171 aagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||| |||| | | ||| ||||||||||| ||||||||  ||||||||||||||||| |||||| ||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccatgtt 49796841  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 25343279 - 25343231
Alignment:
Q  195 ggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| | ||| || |||||||||||||||||| |||||||||||    
T  25343279 ggaaggggtccaaccctttttggtgtattgtacgcagccttaccctgtt 25343231  T

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Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 35894502 - 35894553
Alignment:
Q  191 tccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||||| |||||||| |||||||||||||||||  |||||| ||||    
T  35894502 tccgggaaggggtcccaccatt-ttggtgtattgtacgcacacttaccgtgtt 35894553  T

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Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 46421034 - 46421128
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||||||||||||| |||| | | ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  46421034 aaagggcaaaccggtgcacttaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt 46421128  T

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Target: chr3; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 13628790 - 13628883
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  13628790 aaagggcaacccggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt 13628883  T

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Target: chr3; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 29366720 - 29366813
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| || ||||||| |||||||||||||| | | ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  29366720 aaagggcaacccagtgcact-aaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt 29366813  T

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Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 353351 - 353442
Alignment:
Q  151 agggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||| |||||||||| ||||||||| ||||||   ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  353351 agggcaacccggtgcact-aaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt 353442  T

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Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 13730602 - 13730695
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| ||||||   ||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||    
T  13730602 aaagggcaacccggtgcact-aaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgtt 13730695  T

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Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 14987116 - 14987023
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||| || |||||||||| ||||||||| |||||| | |||||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  14987116 aaagggaaacccggtgcact-aaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgtt 14987023  T

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Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 49013473 - 49013566
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| | ||||   ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  49013473 aaagggcaacccggtgcact-aaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt 49013566  T

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Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 8247688 - 8247780
Alignment:
Q  151 agggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||| || ||||||||||||||||| |||| | | |||||||||||| || ||||||||||||||||||||||||||  |||||||||||    
T  8247688 agggcaacccagtgcacttaaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgtt 8247780  T

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Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 15797377 - 15797286
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | |||||||||||||| | ||||||||||||||| |||||||  |||||||||||||||||| |||||||||||    
T  15797377 aaagggcaacccggtgcact-agagctcccacatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagccttaccctgtt 15797286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 148 - 243
Target Start/End: Complemental strand, 39203672 - 39203580
Alignment:
Q  148 taaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||| |||||||||| ||||||||| |||||| | ||||||||||||||| |||||||  |||||||||||||||||  |||||||||||    
T  39203672 taaagggcaacccggtgcact-aaagctcccgcatatgcaaggtccgggaaggggtcccaccat--ttggtgtattgtacgcaaccttaccctgtt 39203580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 147 - 243
Target Start/End: Original strand, 45786212 - 45786307
Alignment:
Q  147 ataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||| |||||||||| ||||||||  |||  | | ||||||||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  45786212 ataaagggcaacccggtgcact-aaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtt 45786307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 40272812 - 40272903
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  40272812 aaagggcaacccggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 40272903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 1217245 - 1217154
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| || |||||  ||||||||||||||||| |||||||||||    
T  1217245 aaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccgccatt--tggtgtattgtacgcagccttaccctgtt 1217154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 26869863 - 26869772
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||  ||||||||| |||| | ||||||||| ||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  26869863 aaagggcaacccggtgcacc-aaagctcccgcatacgcatggtccggcaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 26869772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 31593004 - 31592913
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | ||||||| |||||| | |||||||||||| || ||||||||  ||||||||||||||||| |||||||||||    
T  31593004 aaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggagtcccaccatt--tggtgtattgtacgcagccttaccctgtt 31592913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 34771364 - 34771455
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||  |||||||||| | ||||||| |||||| | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  34771364 aaagggcagcccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 34771455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 54484848 - 54484757
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||| |||||||  |||||||||||||||||| |||||| ||||    
T  54484848 aaagggcaacccggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagccttaccttgtt 54484757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 242
Target Start/End: Original strand, 10795422 - 10795515
Alignment:
Q  148 taaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgt 242  Q
    |||||||||| | |||||||| || |||||| |||| | | ||||| ||||||||| |||||||| |||||||||||||||||| ||||||||||    
T  10795422 taaagggcaacctggtgcactgaa-gctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgt 10795515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 22122918 - 22123008
Alignment:
Q  150 aagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||| |||||||||| | ||||| | |||||| | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  22122918 aagggcaacccggtgcact-agagctctcgcatatgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 22123008  T

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Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 22609921 - 22609831
Alignment:
Q  150 aagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||| |||||||||| || |||||| |||| | | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  22609921 aagggcaacccggtgcactgaa-gctcccgcatacgcaaggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 22609831  T

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Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 34420662 - 34420735
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||||||| | | ||||||||||||||| |||||||| ||||||||| |||||||| |||||||||||    
T  34420662 taaagctcccacatacgcaaggtccgggaaggggtcccaccatt-ttggtgtatggtacgcagccttaccctgtt 34420735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 54374364 - 54374434
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    |||||||||| |||||| | ||||||||||||||| |||||||| |||||| ||||||||||| ||||||||    
T  54374364 taaagctcccgcatatgcagggtccgggaaggggtcccaccatt-ttggtggattgtacgcagccttaccct 54374434  T

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Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 9607343 - 9607269
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||| ||||||   |||| |||||||||| ||| ||||||||||||||| ||||||| |||||||||||    
T  9607343 taaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgtt 9607269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 53996565 - 53996657
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||  |||||||||| |||||||||||||| | |  ||| |||||||||| |||||||| ||||||||||||| |||| |||||||||||    
T  53996565 aaagggcagcccggtgcact-aaagctcccacatacgcagtgtcagggaaggggtcccaccatt-ttggtgtattgtaagcagccttaccctgtt 53996657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 5173719 - 5173793
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattg 224  Q
    ||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||  |||||||| |||||||||||    
T  5173719 aaagggcaacccggtgcact-aaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattg 5173793  T

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Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 12914035 - 12914126
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||| || |||||||| |||||| | |||| ||||||||||  |||||||  ||||||||||||||| | |||||||||||    
T  12914035 aaagggcaacccggtgca-ttgaagctcccgcatatgcagggtctgggaaggggtctcaccatt--tggtgtattgtacgccgccttaccctgtt 12914126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 47624159 - 47624107
Alignment:
Q  189 ggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  47624159 ggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 47624107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 16735557 - 16735506
Alignment:
Q  190 gtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  16735557 gtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 16735506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 33926221 - 33926148
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||| | |||||| | ||||| ||||||||| |||||||||| |||||||||||| ||| |||||||||||    
T  33926221 taaagctctcgcatatgcagggtccaggaaggggtcccaccattat-ggtgtattgtacacagccttaccctgtt 33926148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 45139515 - 45139568
Alignment:
Q  189 ggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgt 242  Q
    |||| |||||||||| |||||||| ||||||||||||| |||| ||||||||||    
T  45139515 ggtctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgt 45139568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 52926219 - 52926304
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttac 237  Q
    ||||||||| ||||||| || ||||||||| |||| | | |||||||||||| || |||||||  |||||||||||||||||| |||||    
T  52926219 aaagggcaacccggtgcgct-aaagctcccgcatacgcagggtccgggaaggtgtcccaccat--ttggtgtattgtacgcagccttac 52926304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 55401314 - 55401242
Alignment:
Q  170 aaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||| | | |||||| |||||||| |||||||| |||||||||| |||||||||||| ||||||    
T  55401314 aaagctcccgcatacggaaggtccgagaaggggtcccaccatt-ttggtgtattatacgcagtcttaacctgtt 55401242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 6411833 - 6411913
Alignment:
Q  160 cggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| ||||||||| |||| | | |||| |||||||||| ||| ||||  ||||||||||||||||| |||||||||||    
T  6411833 cggtgcact-aaagctcccgcatacgcaaggtctgggaaggggtcccatcatt--tggtgtattgtacgcagccttaccctgtt 6411913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 516569 - 516475
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattatt-ggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | | |||| |||||||||| || ||||| || ||| |||||| ||||| |||||||||||    
T  516569 aaagggcaacccggtgcact-aaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgtt 516475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 7943128 - 7943056
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||| |||| | |||||| || ||||| | ||||||||  || ||||||||||||||||||||||||||    
T  7943128 taaagctcccgcatacgcatggtctggaaagggatcccaccatt--tgatgtattgtacgcagtcttaccctgtt 7943056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 24851301 - 24851363
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccatt 212  Q
    ||||||||| |||||||||| ||||||||| |||||| | | ||||||||||||| ||||||||    
T  24851301 aaagggcaacccggtgcact-aaagctcccgcatatgcaggatccgggaaggggtcccaccatt 24851363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 26573245 - 26573193
Alignment:
Q  189 ggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| ||||| ||||||  ||||||||||||||||||| |||||||||||    
T  26573245 ggtccgggatggggtcccacca--attggtgtattgtacgcagccttaccctgtt 26573193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 25944608 - 25944551
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtac 227  Q
    ||||||||||||||| | | |||| |||||||||| |||||||| ||||||||||||||    
T  25944608 taaagctcccacatacgcagggtcagggaaggggtcccaccatt-ttggtgtattgtac 25944551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 45948848 - 45948926
Alignment:
Q  159 ccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    |||||||||| ||||||||| |||| | | |||||| |||||||| ||||||  |||||||||||||| |||| ||||||||    
T  45948848 ccggtgcact-aaagctcccgcatacgcagggtccgagaaggggtcccacca--attggtgtattgtatgcagccttaccct 45948926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 30452952 - 30452892
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccacca 210  Q
    ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| ||||||    
T  30452952 aaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccacca 30452892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 12221914 - 12222008
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  12221914 aaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt 12222008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 29355855 - 29355948
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  29355855 aaagggcaacccggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt 29355948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 2166410 - 2166490
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgca 230  Q
    ||||||||| |||||||||| |||||||||  |||| || ||||||||||||||| ||||||||||||||||||||||||||    
T  2166410 aaagggcaacccggtgcact-aaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgca 2166490  T

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Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 2178043 - 2178123
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgca 230  Q
    ||||||||| |||||||||| |||||||||  |||| || ||||||||||||||| ||||||||||||||||||||||||||    
T  2178043 aaagggcaacccggtgcact-aaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgca 2178123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 1347097 - 1347006
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  1347097 aaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 1347006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 1354757 - 1354848
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  1354757 aaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 1354848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 12892144 - 12892064
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgca 230  Q
    ||||||||| |||||||||| ||||||||| ||||||   ||||||||||||||| ||||||||||||||||||| ||||||    
T  12892144 aaagggcaacccggtgcact-aaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatacgca 12892064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 25557867 - 25557767
Alignment:
Q  140 agagaagataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccc 239  Q
    |||||| | ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||||||  ||||  ||||||||||||||||| |||||||    
T  25557867 agagaataaaaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggttccttcatt--tggtgtattgtacgcagccttaccc 25557771  T
Q  240 tgtt 243  Q
    ||||    
T  25557770 tgtt 25557767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 231
Target Start/End: Complemental strand, 12886048 - 12885967
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcag 231  Q
    ||||||||| |||||||||| |||||||||||||| | | |||| |||||||||| |||||||| || |||||||||||||||    
T  12886048 aaagggcaacccggtgcact-aaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgtattgtacgcag 12885967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 3116129 - 3116212
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtc 233  Q
    |||||||||||||||| ||| ||||||||| |||| | | |||||| |||||||| |||||||| |||||||||||| |||||||    
T  3116129 aaagggcaatccggtgtact-aaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgtattgtgcgcagtc 3116212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 7947390 - 7947461
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctg 241  Q
    ||||||||||||||| | | ||||||||||||||  |||||||| |||||||||||||||||| |||||||||    
T  7947390 taaagctcccacatacgcaaggtccgggaagggggcccaccatt-ttggtgtattgtacgcagccttaccctg 7947461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 26097302 - 26097202
Alignment:
Q  140 agagaagataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccc 239  Q
    |||||| | ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| ||  ||||  ||||||||||||||||| |||||||    
T  26097302 agagaataaaaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccttcatt--tggtgtattgtacgcagccttaccc 26097206  T
Q  240 tgtt 243  Q
    ||||    
T  26097205 tgtt 26097202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 6024331 - 6024277
Alignment:
Q  189 ggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||| ||| ||| |||||||||||||||||||||||||||||| ||||    
T  6024331 ggtccgggaagaggtcccatcattattggtgtattgtacgcagtcttaccatgtt 6024277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 9161259 - 9161166
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| | |||||||| |||||| || |||| | | |||||| |||||||| |||||||||||| |||||||||||||| ||||| |||||    
T  9161259 aaagggcaacctggtgcact-aaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttactctgtt 9161166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 14975094 - 14975164
Alignment:
Q  153 ggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattg 224  Q
    ||||| |||||||||| ||| ||||| ||||||   ||| ||||||||||| ||||||||||||||||||||    
T  14975094 ggcaacccggtgcactaaaa-ctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattg 14975164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 32579541 - 32579474
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttacc 238  Q
    |||||||||| |||||| | |||| |||||||||| ||||||||  ||| ||||||||||||| ||||||    
T  32579541 taaagctcccgcatatgcagggtctgggaaggggtcccaccatt--tggggtattgtacgcaggcttacc 32579474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 6808535 - 6808467
Alignment:
Q  144 aagataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccatta 213  Q
    |||| ||||||||| |||||||||| ||||||||| ||||   | ||||||||||||||| |||||||||    
T  6808535 aagaaaaagggcaacccggtgcact-aaagctcccgcatacacagggtccgggaaggggtcccaccatta 6808467  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 16895694 - 16895774
Alignment:
Q  147 ataaagggcaatcc-ggtgcacttaaagctcccacatatgtatggtccgggaa-ggggttccaccattattggtgtattgta 226  Q
    ||||||||||| || |||||||| ||| || ||||||||||| |||||||||| ||||| |||||||| || ||||||||||    
T  16895694 ataaagggcaaacccggtgcactaaaa-cttccacatatgtagggtccgggaagggggtcccaccatttttagtgtattgta 16895774  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 16915983 - 16916063
Alignment:
Q  147 ataaagggcaa-tccggtgcacttaaagctcccacatatgtatggtccgggaagg-ggttccaccattattggtgtattgta 226  Q
    ||||||||||| ||||||||||| |||||||||||||||||| ||||  |||||| ||| | |||||| || ||||||||||    
T  16915983 ataaagggcaaatccggtgcact-aaagctcccacatatgtagggtctaggaaggaggtcctaccatttttagtgtattgta 16916063  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 3815087 - 3815163
Alignment:
Q  159 ccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttacc 238  Q
    |||||||||| |||||| || |||| ||| ||| |||||| |||| ||||||||  ||||||||||||||||||| ||||    
T  3815087 ccggtgcact-aaagcttccgcatacgtagggttcgggaaagggtcccaccatt--tggtgtattgtacgcagtcgtacc 3815163  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 24734738 - 24734686
Alignment:
Q  191 tccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||||| ||||| || ||| |||||||||||||  |||||||||||    
T  24734738 tccgggaaggggtcccaccttttttgttgtattgtacgcaaccttaccctgtt 24734686  T

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Target: chr5 (Bit Score: 59; Significance: 7e-25; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 38879718 - 38879625
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  38879718 aaagggcaacccggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt 38879625  T

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Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 147 - 243
Target Start/End: Original strand, 13801765 - 13801860
Alignment:
Q  147 ataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||| |||||||||| ||||||| | ||||||   ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  13801765 ataaagggcaacccggtgcact-aaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt 13801860  T

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Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 4619104 - 4619197
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||| | ||||||   ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  4619104 aaagggcaacccggtgcact-aaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt 4619197  T

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Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 27328885 - 27328796
Alignment:
Q  153 ggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||| ||||||||||| |||| | | ||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  27328885 ggcaatccgatgca-ttaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt 27328796  T

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Target: chr5; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 7368528 - 7368440
Alignment:
Q  152 gggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||| |||||||||| | |||||||||||||| | ||||||||||||||| ||||||  ||||||||||||||||||| |||||||||||    
T  7368528 gggcaacccggtgcact-agagctcccacatatgcagggtccgggaaggggtcccacca--attggtgtattgtacgcagccttaccctgtt 7368440  T

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Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 8169984 - 8170075
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||| ||||| |||||| | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  8169984 aaagggcaacccggtgcactgaaa-ctcccgcatatgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 8170075  T

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Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 32703557 - 32703466
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  32703557 aaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 32703466  T

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Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 43334339 - 43334247
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||  | | ||||||||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  43334339 aaagggcaacccggtgcact-aaagctcccgcatc-gcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtt 43334247  T

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Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 20135740 - 20135648
Alignment:
Q  150 aagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||| |||||||||| || |||||  ||||||   ||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  20135740 aagggcaacccggtgcactgaa-gctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgtt 20135648  T

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Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 25622595 - 25622524
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgta 221  Q
    |||||||||||||||||||| ||||||||| |||| | | ||||||||||||||| |||||||||||||||||    
T  25622595 aaagggcaatccggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgta 25622524  T

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Target: chr5; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 147 - 241
Target Start/End: Original strand, 34154812 - 34154903
Alignment:
Q  147 ataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctg 241  Q
    ||||||||||| |||||||||| | |||| || |||||| | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||    
T  34154812 ataaagggcaacccggtgcact-agagctaccgcatatgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctg 34154903  T

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Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 41014453 - 41014362
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| ||||||   ||||| ||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  41014453 aaagggcaacccggtgcact-aaagctcccgcatatgcggggtccaggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 41014362  T

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Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 146 - 243
Target Start/End: Original strand, 16880644 - 16880738
Alignment:
Q  146 gataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| || |||||||||| ||||||||| |||| | ||||||||||||| |||  |||||||  ||||||||||||||||| |||||||||||    
T  16880644 gataaagggaaacccggtgcact-aaagctcccgcatacgcatggtccgggaagtggtcacaccatt--tggtgtattgtacgcagccttaccctgtt 16880738  T

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Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 24449025 - 24448937
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    ||||||||| |||||||||| ||||||||  |||| | | ||||||||||||||| ||||||||  ||||||||||||||||| ||||||||    
T  24449025 aaagggcaacccggtgcact-aaagctcctgcatacgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccct 24448937  T

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Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 35710446 - 35710358
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    ||||||||| |||||||||| | ||||||| |||||| ||| ||||||||||||| |||||||  ||||||||||| |||||| ||||||||    
T  35710446 aaagggcaacccggtgcact-agagctcccgcatatgcatgttccgggaaggggtcccaccat--ttggtgtattgaacgcagccttaccct 35710358  T

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Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 1565567 - 1565483
Alignment:
Q  148 taaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtctta 236  Q
    |||||||||| ||||||||||  ||||||||||||||| | ||||||||||||||| || ||||  |||||| ||||||||||| ||||    
T  1565567 taaagggcaacccggtgcact--aagctcccacatatgcagggtccgggaaggggtcccgccat--ttggtgcattgtacgcagcctta 1565483  T

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Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 150 - 240
Target Start/End: Original strand, 12006329 - 12006418
Alignment:
Q  150 aagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    ||||||||  ||||||||| ||||||||| |||| | | |||| |||||||||| |||||||||||||||||||||| | || ||||||||    
T  12006329 aagggcaacacggtgcact-aaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccct 12006418  T

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Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 16957449 - 16957374
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtac 227  Q
    ||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||| |||||||  ||||||||||||||    
T  16957449 aaagggcaacccggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtac 16957374  T

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Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 19142962 - 19143034
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||| ||||| |||| | ||||||||||||||||| |||||||  |||||||| ||||||||| |||||||||||    
T  19142962 taaatctcccgcatacgcatggtccgggaaggggtcccaccat--ttggtgtactgtacgcagccttaccctgtt 19143034  T

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Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 43574722 - 43574650
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||| |||| | | ||||||||||||||| |||||||  ||||| |||||||||||| |||||||||||    
T  43574722 taaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtatattgtacgcagccttaccctgtt 43574650  T

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Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 29334531 - 29334439
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||  |||||||| |||||| ||||||||| | | |||||||||| |||| |||||||| | |||||||||||||||| |||||| ||||    
T  29334531 aaagggcagcccggtgca-ttaaagatcccacatacgcagggtccgggaatgggtcccaccattct-ggtgtattgtacgcagccttaccttgtt 29334439  T

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Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 214
Target Start/End: Original strand, 30877563 - 30877628
Alignment:
Q  148 taaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattat 214  Q
    |||||||||| |||||||||| | |||||||||||||| | ||||||||||||||| ||||| ||||    
T  30877563 taaagggcaacccggtgcact-agagctcccacatatgcagggtccgggaaggggtcccacctttat 30877628  T

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Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 3771474 - 3771383
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||  |||||||||| ||||||||||||||   |  |||||||||||||| ||||||  ||||||||||||| | ||| |||||||||||    
T  3771474 aaagggcagcccggtgcact-aaagctcccacatacacagagtccgggaaggggtcccacca--attggtgtattgttcacagccttaccctgtt 3771383  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 12477161 - 12477205
Alignment:
Q  191 tccgggaaggggttccaccattattggtgtattgtacgcagtctta 236  Q
    ||||||||||||| |||||||| |||||||||||||||||| ||||    
T  12477161 tccgggaaggggtcccaccatt-ttggtgtattgtacgcagcctta 12477205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 42924876 - 42924925
Alignment:
Q  194 gggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||| ||||| |||| |||||||||||||||||  |||||||||||    
T  42924876 gggaagggattccatcatttttggtgtattgtacgcaaccttaccctgtt 42924925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 10306493 - 10306548
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgt 225  Q
    |||||||||| |||| | | ||||||||||||||| |||||||| ||||||||||||    
T  10306493 taaagctcccgcatacgcagggtccgggaaggggtcccaccatt-ttggtgtattgt 10306548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 16028624 - 16028683
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccacc 209  Q
    ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| |||||    
T  16028624 aaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccacc 16028683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 39079788 - 39079827
Alignment:
Q  187 atggtccgggaaggggttccaccattattggtgtattgtac 227  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  39079788 atggtccgggaaggggtcccaccatt-ttggtgtattgtac 39079827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 7e-25; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 18944804 - 18944710
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  18944804 aaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgtt 18944710  T

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Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 144 - 243
Target Start/End: Original strand, 42304202 - 42304300
Alignment:
Q  144 aagataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||| |||||||||||||||||||| |||||||||||||| | | ||||||||||||||| |||||||| || ||||||||||||||  |||||||||||    
T  42304202 aagaaaaagggcaatccggtgcact-aaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccctgtt 42304300  T

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Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 30395726 - 30395819
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||  ||||||||| ||||||||| ||||||   ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  30395726 aaagggcaactcggtgcact-aaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt 30395819  T

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Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 35253187 - 35253278
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||||||||||||| | ||||||| |||||| | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  35253187 aaagggcaatccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 35253278  T

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Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 20004090 - 20004183
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| ||||||   |||| |||||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  20004090 aaagggcaacccggtgcact-aaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgtt 20004183  T

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Target: chr1; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 148 - 243
Target Start/End: Complemental strand, 4349797 - 4349705
Alignment:
Q  148 taaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  4349797 taaagggcaacccggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 4349705  T

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Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 38478282 - 38478373
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | ||||||| |||||| | |||||| |||||||||||||||||  ||||||||||||||||| |||||||||||    
T  38478282 aaagggcaacccggtgcact-agagctcccgcatatgcagggtccgagaaggggttccaccatt--tggtgtattgtacgcagccttaccctgtt 38478373  T

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Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 46247953 - 46248044
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| ||||| |||| ||||||||| |||| | | ||||||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  46247953 aaagggcaacccggtacact-aaagctcccgcatacgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagtcttaccctgtt 46248044  T

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Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 10668385 - 10668292
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | | || |||||||||||| ||||||||||||||||||||||||||  |||||| ||||    
T  10668385 aaagggcaacccggtgcact-aaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgtt 10668292  T

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Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 27201788 - 27201714
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||| |||| | | ||||||||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  27201788 taaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtt 27201714  T

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Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 35005283 - 35005190
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||| ||| |||| | | ||||||||||||||| |||||||| ||||||||||||| |||| |||||||||||    
T  35005283 aaagggcaacccggtgcact-aaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtt 35005190  T

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Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 34725098 - 34725189
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| |||||||  || ||||||||||||||| |||||||||||    
T  34725098 aaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccat--ttagtgtattgtacgcagccttaccctgtt 34725189  T

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Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 50606561 - 50606487
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattg 224  Q
    ||||||||| |||||||||| ||||||||| |||||| | ||||||||||||||| |||||||| |||||||||||    
T  50606561 aaagggcaacccggtgcact-aaagctcccgcatatgcagggtccgggaaggggtcccaccatttttggtgtattg 50606487  T

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Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 18741957 - 18742050
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||| || |||||||||| ||||||| | |||| | | |||| |||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  18741957 aaagggaaacccggtgcact-aaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtt 18742050  T

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Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 19932792 - 19932846
Alignment:
Q  189 ggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  19932792 ggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtt 19932846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 46991959 - 46991871
Alignment:
Q  152 gggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||| |||||||||| |||||||||||||| | | ||||||||||||||| |||||||  | |||||||||||| ||| |||||||||||    
T  46991959 gggcaacccggtgcact-aaagctcccacatacgcagggtccgggaaggggtcccaccat--tcggtgtattgtacacagccttaccctgtt 46991871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 19414595 - 19414504
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | ||||||| |||||| | ||| ||||||||||| ||||||||  ||||||||||||||||| |||| ||||||    
T  19414595 aaagggcaacccggtgcact-agagctcccgcatatgcagggtacgggaaggggtcccaccatt--tggtgtattgtacgcagccttaacctgtt 19414504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 10378745 - 10378826
Alignment:
Q  159 ccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||| ||||||||| |||||| | |||||  |||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  10378745 ccggtgcact-aaagctcccgcatatgcagggtccaagaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 10378826  T

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Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 14617196 - 14617103
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttat 245  Q
    |||||| || |||||||||| ||||||||| |||||| | ||||||||||||| | |||||||  |||||||||||||||||  |||||| ||||||    
T  14617196 aaagggtaacccggtgcact-aaagctcccgcatatgcagggtccgggaagggatcccaccat--ttggtgtattgtacgcaaccttaccttgttat 14617103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 15505702 - 15505632
Alignment:
Q  170 aaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgt 242  Q
    ||||||||| |||| | | ||| ||||||||||| ||||||||  ||||||||||||||||||||||||||||    
T  15505702 aaagctcccgcatacgcagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagtcttaccctgt 15505632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 12126859 - 12126928
Alignment:
Q  172 agctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||| |||||| | ||||||||||||||| |||| |||  ||||||||||||||||| |||||||||||    
T  12126859 agctcccgcatatgcagggtccgggaaggggtcccacaatt--tggtgtattgtacgcagccttaccctgtt 12126928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 27474438 - 27474376
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccatt 212  Q
    |||||||||||||||||||| ||||||||| |||| | | ||||||||||||||| ||||||||    
T  27474438 aaagggcaatccggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccatt 27474376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 31382233 - 31382305
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||| |||||| | ||||| ||||||||| ||||||||  ||||||||||||||||| |||| ||||||    
T  31382233 taaagctcccgcatatgcagggtccaggaaggggtcccaccatt--tggtgtattgtacgcagccttatcctgtt 31382305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 41319806 - 41319897
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| || ||||||| ||| ||||| |||||| | ||| ||||||||||| ||| ||||  ||||||||||||||||| |||||||||||    
T  41319806 aaagggcaacccagtgcactgaaa-ctcccgcatatgaagggttcgggaaggggtcccatcatt--tggtgtattgtacgcagccttaccctgtt 41319897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 47214667 - 47214576
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||| |||| |||||||| | ||||||| |||||| | |||| |||||||||| ||||||||  ||||||||||||||||  |||||||||||    
T  47214667 aaagggtaatctggtgcact-agagctcccgcatatgcagggtctgggaaggggtcccaccatt--tggtgtattgtacgcaaccttaccctgtt 47214576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 18724565 - 18724636
Alignment:
Q  170 aaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||| ||||||||||||||| |||  ||  |||||||||||||| ||| |||||||||||    
T  18724565 aaagctcccgcatatgtagggtccgggaaggggtcccaagat--ttggtgtattgtacacagccttaccctgtt 18724636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 23768325 - 23768411
Alignment:
Q  154 gcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||| |||||| ||||||||| |||| | | |||| ||||||| || ||||||||  ||||||||||||||||| |||||||||||    
T  23768325 gcaatccgctgcact-aaagctcccgcatacgcagggtctgggaaggtgtcccaccatt--tggtgtattgtacgcagccttaccctgtt 23768411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 31442429 - 31442481
Alignment:
Q  190 gtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||||||| |||||||| |||||||||||||||||  |||||||||||    
T  31442429 gtccgggaaggggtcccaccatt-ttggtgtattgtacgcatccttaccctgtt 31442481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 32632578 - 32632648
Alignment:
Q  171 aagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||| |||||| | |||  |||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  32632578 aagctcccgcatatgcagggtttgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 32632648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 35117805 - 35117858
Alignment:
Q  189 ggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgt 242  Q
    ||||||||||||||| ||| |||| |||||||||||||| ||| ||||||||||    
T  35117805 ggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgt 35117858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 20036340 - 20036291
Alignment:
Q  189 ggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    |||||||||||||||||||||||  ||||||||||| ||||| |||||||||    
T  20036340 ggtccgggaaggggttccaccat--ttggtgtattgaacgcaatcttaccct 20036291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 45402251 - 45402175
Alignment:
Q  152 gggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcag 231  Q
    |||||| |||||||||| ||||||||| |||| | | |||| |||||||||| ||||||||  |||||||||||||||||    
T  45402251 gggcaacccggtgcact-aaagctcccgcatacgcagggtctgggaaggggtcccaccatt--tggtgtattgtacgcag 45402175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 2435786 - 2435875
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    |||||| | ||||||||||| ||||||||| |||  | | ||| ||| ||||||| |||||||| |||||||||||||||||| ||||||||    
T  2435786 aaaggggagtccggtgcact-aaagctcccgcatgcggagggtacggaaaggggtcccaccatt-ttggtgtattgtacgcaggcttaccct 2435875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 43768297 - 43768206
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||  |||||||| |||||||||||  ||| | | |||| |||||||||| ||||||  |||||||||||||| |||| |||||||||||    
T  43768297 aaagggcagcccggtgca-ttaaagctcccgtatacgcagggtctgggaaggggtcccacca--attggtgtattgtaggcagccttaccctgtt 43768206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 11596650 - 11596579
Alignment:
Q  170 aaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||| | | ||||| ||||||||| ||||||||  ||||||||| ||||||| |||||||||||    
T  11596650 aaagctcccgcatacgcagggtccaggaaggggtcccaccatt--tggtgtattatacgcagccttaccctgtt 11596579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 22325009 - 22324959
Alignment:
Q  193 cgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||| |||| ||||||||| ||||||||||||| |||| |||||||||||    
T  22325009 cgggacggggctccaccatttttggtgtattgtatgcagccttaccctgtt 22324959  T

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Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 46859170 - 46859133
Alignment:
Q  205 ccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  46859170 ccaccatt-ttggtgtattgtacgcagtcttaccctgtt 46859133  T

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Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 243
Target Start/End: Original strand, 4430088 - 4430117
Alignment:
Q  214 ttggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||||||||||||||||||||||    
T  4430088 ttggtgtattgtacgcagtcttaccctgtt 4430117  T

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Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 44485129 - 44485195
Alignment:
Q  170 aaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttacc 238  Q
    ||||||||| |||| ||| | ||||||||||||| | ||||||  ||||||||||||||||| ||||||    
T  44485129 aaagctcccgcatacgtaggatccgggaaggggtccaaccatt--tggtgtattgtacgcagccttacc 44485195  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 236
Target Start/End: Original strand, 1517311 - 1517395
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtctta 236  Q
    ||||||||| |||||||||| ||||||||  |||| | | |||| | |||||||| ||||||  ||||||||||||||||||| ||||    
T  1517311 aaagggcaacccggtgcact-aaagctcctgcatacgcagggtctgagaaggggtcccacca--attggtgtattgtacgcagcctta 1517395  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 45812541 - 45812625
Alignment:
Q  153 ggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    ||||| |||||||||| | ||||||| |||||| | |||  |||||||||| ||||||||  |||||||||||| |||| ||||||||    
T  45812541 ggcaacccggtgcact-agagctcccgcatatgcagggtttgggaaggggtcccaccatt--tggtgtattgtatgcagccttaccct 45812625  T

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Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 16225158 - 16225063
Alignment:
Q  147 ataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||| ||| |||||||||| ||||||||| ||||||   ||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  16225158 ataaaggacaacccggtgcact-aaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccctgtt 16225063  T

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Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 20870060 - 20869967
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| ||||||   ||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  20870060 aaagggcaacccggtgcact-aaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt 20869967  T

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Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 149 - 241
Target Start/End: Original strand, 7136527 - 7136618
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctg 241  Q
    |||||| || |||||||||| ||||||||| ||||||   ||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  7136527 aaagggtaacccggtgcact-aaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 7136618  T

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Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 6760959 - 6760866
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| ||||||   |||||| |||||||| |||||||||||||||||||||||| || |||||||||||    
T  6760959 aaagggcaacccggtgcact-aaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgtt 6760866  T

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Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 26954270 - 26954177
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| || ||||||| ||||||||| ||||||   |||| |||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  26954270 aaagggcaacccagtgcact-aaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt 26954177  T

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Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 39460994 - 39461087
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | | |||||||||||||||  |||||||||||||||||||||||||| ||||| |||||    
T  39460994 aaagggcaacccggtgcact-aaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgtt 39461087  T

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Target: chr8; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 5689761 - 5689677
Alignment:
Q  154 gcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctg 241  Q
    |||| |||||||||| |||||||||||||| | ||||| |||||||||||||||||||  |||||||||||||||||| |||||||||    
T  5689761 gcaaaccggtgcact-aaagctcccacatacgcatggttcgggaaggggttccaccat--ttggtgtattgtacgcagccttaccctg 5689677  T

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Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 20284079 - 20284159
Alignment:
Q  159 ccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    |||||||||| ||| ||||| |||| | | ||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  20284079 ccggtgcactaaaa-ctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 20284159  T

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Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 21070707 - 21070787
Alignment:
Q  159 ccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    |||||||||| ||| ||||| |||| | | ||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  21070707 ccggtgcactaaaa-ctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 21070787  T

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Target: chr8; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 2626657 - 2626566
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||| |||||||| || |||||| |||||| | |||| |||||||||| ||| ||||  |||||||||||||||||||||||||||||    
T  2626657 aaagggcaatctggtgcactgaa-gctcccgcatatgcagggtctgggaaggggtcccatcatt--tggtgtattgtacgcagtcttaccctgtt 2626566  T

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Target: chr8; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 12626025 - 12625934
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | | ||||||||| ||||| ||||||||  |||||||||||| ||||||||||||||||    
T  12626025 aaagggcaacccggtgcact-aaagctcccgcatacgcagggtccgggagggggtcccaccatt--tggtgtattgtatgcagtcttaccctgtt 12625934  T

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Target: chr8; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 12670250 - 12670341
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||| || |||||||||| | ||||||| |||||| | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  12670250 aaagggtaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 12670341  T

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Target: chr8; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 25250659 - 25250569
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    ||||||||| |||||||||| ||| ||||| ||||||   ||| ||||||||||| ||||||||||||||||||||||||||| | ||||||    
T  25250659 aaagggcaacccggtgcact-aaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccct 25250569  T

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Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 241
Target Start/End: Complemental strand, 17823712 - 17823622
Alignment:
Q  148 taaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctg 241  Q
    |||||||||| |||||||||| ||||||||  |||||| | ||| |||||||||||||||||||  |||||||||| |||||||||||| ||||    
T  17823712 taaagggcaacccggtgcact-aaagctcctgcatatgcagggttcgggaaggggttccaccat--ttggtgtattttacgcagtcttatcctg 17823622  T

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Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 45071398 - 45071308
Alignment:
Q  150 aagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||| |||||||||| || |||||| |||| | | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  45071398 aagggcaacccggtgcactgaa-gctcccgcatacgcaaggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 45071308  T

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Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 148 - 243
Target Start/End: Complemental strand, 13160837 - 13160745
Alignment:
Q  148 taaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||| |||| ||||| || |||||| |||| | | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  13160837 taaagggcaacccggcgcactgaa-gctcccgcatacgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 13160745  T

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Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 19729475 - 19729384
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||||| ||||||| | |||||||  ||||| | ||||||||||||||| ||||||||  ||||||||||||| ||| |||||||||||    
T  19729475 aaagggcaatccagtgcact-agagctcccgtatatgcagggtccgggaaggggtcccaccatt--tggtgtattgtacacagccttaccctgtt 19729384  T

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Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 28817626 - 28817717
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| ||| |||||| ||||||||| |||| | | ||||||||||||||| |||||||  | |||||||||||||||| |||||||||||    
T  28817626 aaagggcaacccgatgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccat--tgggtgtattgtacgcagccttaccctgtt 28817717  T

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Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 30454097 - 30454188
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| |||||||  ||||||||| |||||||| |||||| ||||    
T  30454097 aaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtatcgtacgcagccttaccttgtt 30454188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 35261814 - 35261723
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | | ||||| ||||||||| ||||||||  ||||||||||||||||  |||||||||||    
T  35261814 aaagggcaacccggtgcact-aaagctcccgcatacgcagggtccaggaaggggtcccaccatt--tggtgtattgtacgcaaccttaccctgtt 35261723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 36720931 - 36720840
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| | |||||||| |||||| || |||| | | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  36720931 aaagggcaaccgggtgcact-aaagcttccgcatacgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 36720840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 44530284 - 44530193
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||| ||| |||||||||| ||||||||| |||| | | ||||| ||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  44530284 aaaggtcaacccggtgcact-aaagctcccgcatacgcagggtccaggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 44530193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 43942417 - 43942368
Alignment:
Q  194 gggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  43942417 gggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtt 43942368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 8897783 - 8897852
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    |||||||||| |||||| | ||||||||||||||| |||||||  ||||||||||||||| || ||||||||    
T  8897783 taaagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgtagccttaccct 8897852  T

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Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 24365079 - 24365148
Alignment:
Q  170 aaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctg 241  Q
    |||||||||||||| | | ||||||||||||||| |||||||  |||||||||||| ||||| |||||||||    
T  24365079 aaagctcccacatacgcagggtccgggaaggggtcccaccat--ttggtgtattgttcgcagccttaccctg 24365148  T

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Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 10857964 - 10857873
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | | ||||| ||||| ||| ||||||  ||||||||||||| ||||| |||||||||||    
T  10857964 aaagggcaacccggtgcact-aaagctcccgcatacgcaaggtccaggaagtggtcccacca--attggtgtattgtgcgcagccttaccctgtt 10857873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 29877190 - 29877138
Alignment:
Q  189 ggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  29877190 ggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 29877138  T

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Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 44742528 - 44742610
Alignment:
Q  159 ccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||| || |||||| |||  ||| |||||  |||||||| |||||||| |||||||||||||||||| |||||||||||    
T  44742528 ccggtgcact-aatgctcccgcatccgtagggtccaagaaggggtcccaccatt-ttggtgtattgtacgcagccttaccctgtt 44742610  T

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Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 28407538 - 28407476
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccatt 212  Q
    ||||||||| |||||||| | ||||||||| |||| ||| ||||||||||||||| ||||||||    
T  28407538 aaagggcaacccggtgcagt-aaagctcccgcatacgtagggtccgggaaggggtcccaccatt 28407476  T

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Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 29521685 - 29521776
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||| |||| |||||||||| ||||||||| |||| | | |||| |||| ||| | ||||||||  ||||||||||||||||| |||||||||||    
T  29521685 aaagagcaacccggtgcact-aaagctcccgcatacgcagggtctgggatgggttcccaccatt--tggtgtattgtacgcagccttaccctgtt 29521776  T

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Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 17250918 - 17250968
Alignment:
Q  193 cgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||| |||| ||||||||||||||||||||||||| | |||| ||||||    
T  17250918 cgggaaagggtcccaccattattggtgtattgtacgctgccttaacctgtt 17250968  T

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Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 26102652 - 26102578
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgta 226  Q
    ||||||||| |||||||||| | ||||||| |||| | | ||||||||||||||| |||||||  |||||||||||||    
T  26102652 aaagggcaacccggtgcact-agagctcccgcataagcagggtccgggaaggggtcccaccat--ttggtgtattgta 26102578  T

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Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 5135290 - 5135377
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    ||||||||  |||||||||  ||||||||  |||| | | ||||||||||||||| |||||||  |||||||||||||| ||| ||||||||    
T  5135290 aaagggcagcccggtgcac--aaagctcctgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacacagccttaccct 5135377  T

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Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 16013591 - 16013511
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgca 230  Q
    ||||| ||| |||||||||| ||||||||| |||| | | |||| ||||||||||  ||||||| || ||||||||||||||    
T  16013591 aaaggacaacccggtgcact-aaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgca 16013511  T

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Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 242
Target Start/End: Original strand, 44781523 - 44781596
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgt 242  Q
    |||||||||| |||| | | |||| |||| ||||| ||| |||| |||||||||||||| ||| ||||||||||    
T  44781523 taaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgt 44781596  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 244
Target Start/End: Complemental strand, 24245565 - 24245489
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattatt-ggtgtattgtacgcagtcttaccctgtta 244  Q
    |||||||||| |||| | | ||||| ||||||||| |||| ||| || |||| |||||||| |||||||||||||||    
T  24245565 taaagctcccgcatacgcagggtccaggaaggggtcccacaattttttggtgcattgtacgtagtcttaccctgtta 24245489  T

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Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 47716598 - 47716503
Alignment:
Q  147 ataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||| |||||||||  ||||||||| ||||||   ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  47716598 ataaagggcaacccggtgcacc-aaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt 47716503  T

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Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 42805661 - 42805568
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| ||||||   ||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||    
T  42805661 aaagggcaacccggtgcact-aaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgtt 42805568  T

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Target: chr7; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 43557610 - 43557516
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | |  |||||||| ||||| ||||||||||||||||||||||||||| ||||| |||||    
T  43557610 aaagggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgtt 43557516  T

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Target: chr7; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 19265948 - 19265861
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    ||||||||  |||||||||| |||||||||||||||||| ||||||||||||||| ||||||||  ||||||||||||||||| ||||||||    
T  19265948 aaagggcagcccggtgcact-aaagctcccacatatgta-ggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccct 19265861  T

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Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 21172009 - 21172100
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  21172009 aaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 21172100  T

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Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 42391100 - 42391191
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  42391100 aaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 42391191  T

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Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 46354292 - 46354238
Alignment:
Q  189 ggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  46354292 ggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt 46354238  T

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Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 243
Target Start/End: Original strand, 48735120 - 48735213
Alignment:
Q  147 ataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| |||||||  |||||||||||||||||| |||||| ||||    
T  48735120 ataaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagccttaccgtgtt 48735213  T

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Target: chr7; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 32758394 - 32758303
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| |||||||  |||||||||||||| ||| |||||||||||    
T  32758394 aaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacacagccttaccctgtt 32758303  T

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Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 10693072 - 10693161
Alignment:
Q  148 taaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    |||||||||| || ||||||| | ||||||| |||||| | ||||||||||||||| |||||||  |||||||||||||||||| ||||||||    
T  10693072 taaagggcaacccagtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagccttaccct 10693161  T

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Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 38604652 - 38604570
Alignment:
Q  159 ccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||||||||||||| |||| | | ||||||| |||||||  |||||||  ||||||||||||||||| |||||||||||    
T  38604652 ccggtgcacttaaagctcccgcatacgcagggtccggaaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtt 38604570  T

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Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 7879773 - 7879682
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| || |||||| |||| | | ||||||||||||||| ||||||||  ||||||||||||||||| |||||| ||||    
T  7879773 aaagggcaacccggtgcactgaa-gctcccgcatacgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccttgtt 7879682  T

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Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 11617589 - 11617679
Alignment:
Q  150 aagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||| |||||||||| |||| |||  |||| | | ||||| ||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  11617589 aagggcaacccggtgcact-aaaggtcctgcatacgcagggtccaggaaggggtcccaccatt--tggtgtattgtacgcagtcttaccctgtt 11617679  T

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Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 33500611 - 33500557
Alignment:
Q  189 ggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||||||| |||||||| || |||||| ||||||||||||||||||||    
T  33500611 ggtccgggaaggggtcccaccattttttgtgtatagtacgcagtcttaccctgtt 33500557  T

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Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 243
Target Start/End: Original strand, 22698965 - 22699061
Alignment:
Q  147 ataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaag-gggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||| || |||||||||| | ||||||| ||||   | ||||||||||  |||| |||||||| ||||||||||||||||||||||||||||||    
T  22698965 ataaagggtaacccggtgcact-atagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctgtt 22699061  T

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Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 28362165 - 28362231
Alignment:
Q  170 aaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttacc 238  Q
    |||||||||||||||| | |||| |||||||||| |||||||  |||||||||||||||||| ||||||    
T  28362165 aaagctcccacatatgcaaggtctgggaaggggtcccaccat--ttggtgtattgtacgcagccttacc 28362231  T

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Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 243
Target Start/End: Original strand, 2541018 - 2541110
Alignment:
Q  148 taaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||| || |||||||||| ||||||||| |||| | | || |||||||||||| ||||||||  |||||||| |||||||| |||||||||||    
T  2541018 taaagggaaacccggtgcact-aaagctcccgcatacgcagggaccgggaaggggtcccaccatt--tggtgtatagtacgcagccttaccctgtt 2541110  T

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Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 21566561 - 21566487
Alignment:
Q  159 ccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtctt 235  Q
    |||||||||| ||||||||| |||||| | ||| ||||||||||| | |||||| ||||||||||||||||||||||    
T  21566561 ccggtgcact-aaagctcccgcatatgcagggttcgggaaggggtcctaccatt-ttggtgtattgtacgcagtctt 21566487  T

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Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 31591109 - 31591200
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| |||||||  ||  |||||||||||||| ||||| |||||    
T  31591109 aaagggcaacccggtgcact-agagctcccgcatatgcaaggtccgggaaggggtcccaccat--ttattgtattgtacgcagccttactctgtt 31591200  T

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Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 42798804 - 42798713
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| ||| |||||| | ||||||| |||||| | |||||||||| |||| ||||||||  ||||||||||||||||| |||||| ||||    
T  42798804 aaagggcaacccgatgcact-atagctcccgcatatgcagggtccgggaaagggtcccaccatt--tggtgtattgtacgcagccttaccttgtt 42798713  T

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Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 14732821 - 14732913
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||| |||||||||||||| ||||||||| ||||   | ||| |||||||| ||| ||||||| ||||||||||| |||||| |||||||||||    
T  14732821 aaaggacaatccggtgcact-aaagctcccgcataaacagggttcgggaaggagtttcaccatttttggtgtattg-acgcagccttaccctgtt 14732913  T

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Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 17048834 - 17048907
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| ||||| | | | |||||||||||||||||||||| ||||||||||||||| |  |||||||||||    
T  17048834 taaagctcctacataagcaagttccgggaaggggttccaccatt-ttggtgtattgtacgtaaccttaccctgtt 17048907  T

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Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 23419719 - 23419765
Alignment:
Q  195 ggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  23419719 ggaaggggtcccaccatt--tggtgtattgtacgcagtcttaccctgtt 23419765  T

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Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 35334826 - 35334907
Alignment:
Q  159 ccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||| ||||||||  |||| | | ||||||||||||||| ||||||||   |||||||||||| |||||||||||||||    
T  35334826 ccggtgcact-aaagctcctgcatacgcagggtccgggaaggggtcccaccattc--ggtgtattgtacacagtcttaccctgtt 35334907  T

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Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 39124010 - 39123949
Alignment:
Q  170 aaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcag 231  Q
    ||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| |||||||    
T  39124010 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcag 39123949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 45018923 - 45019006
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccacca--ttattggtgtattgtacgcag 231  Q
    ||||||||| | |||||||| ||||||||| |||| | | ||||||||||||||||||||||  || ||||| ||||||||||||    
T  45018923 aaagggcaacctggtgcact-aaagctcccgcatacgcagggtccgggaaggggttccaccagttttttggtatattgtacgcag 45019006  T

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Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 14099036 - 14099097
Alignment:
Q  180 catatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||| ||| ||| ||||||||||| ||||||||  |||||||||||||||||||||| ||||||    
T  14099036 catacgtagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagtcttaacctgtt 14099097  T

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Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 14409053 - 14409114
Alignment:
Q  180 catatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||| ||| ||| ||||||||||| ||||||||  |||||||||||||||||||||| ||||||    
T  14409053 catacgtagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagtcttaacctgtt 14409114  T

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Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 19426890 - 19426977
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    ||||||||| |||||||||| || |||| | |||||| | |||||| |||||| | ||||||||  ||||||||||||||||||||||||||    
T  19426890 aaagggcaacccggtgcactgaa-gctctcgcatatgcagggtccgagaaggg-tcccaccatt--tggtgtattgtacgcagtcttaccct 19426977  T

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Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 245
Target Start/End: Original strand, 48123508 - 48123577
Alignment:
Q  174 ctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttat 245  Q
    ||||| |||||| ||||||| | ||||||| ||||||||  |||||||||||| ||||| ||||||||||||    
T  48123508 ctcccgcatatgcatggtccagaaaggggtcccaccatt--tggtgtattgtatgcagttttaccctgttat 48123577  T

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Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 18512473 - 18512541
Alignment:
Q  170 aaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    ||||||||| |||| | | ||||||||||||||| |||||||  | |||||||||||||||| ||||||||    
T  18512473 aaagctcccgcatacgcagggtccgggaaggggtcccaccat--tcggtgtattgtacgcagccttaccct 18512541  T

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Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 27629769 - 27629678
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| || ||| || |||||| | || |||||||||||| ||||||||  ||||||||| ||||||  |||||||||||    
T  27629769 aaagggcaacccggtgcactgaa-gctaccgcatatgcagggcccgggaaggggtcccaccatt--tggtgtattttacgcaaccttaccctgtt 27629678  T

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Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 27889316 - 27889395
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcag 231  Q
    ||||||||| |||||| ||  ||||||||| |||| | | ||||||||||||||| |||||||  ||||||||||||||||||    
T  27889316 aaagggcaacccggtgtacc-aaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcag 27889395  T

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Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 34626227 - 34626299
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||| |||| | | ||||||||||||| | ||||||||  |||||||||| |||||| |||||||||||    
T  34626227 taaagctcccgcatacgcagggtccgggaagggatcccaccatt--tggtgtattgaacgcagccttaccctgtt 34626299  T

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Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 35203558 - 35203483
Alignment:
Q  168 ttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||| |||| |||  || | ||||||| | |||||||| ||||| ||||||||||||||||| ||||||    
T  35203558 ttaaagctcccgcatacgtagagttcaggaagggatcccaccatttttggtatattgtacgcagtcttatcctgtt 35203483  T

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Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 35787269 - 35787360
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||| || |||||||| |||| | | ||||||||||||||| || ||||  |||||||||||||||||  |||||| ||||    
T  35787269 aaagggcaacccggtgca-ttgaagctcccgcatacgcaaggtccgggaaggggtcccgccat--ttggtgtattgtacgcaaccttaccatgtt 35787360  T

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Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 39093439 - 39093531
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||  |||||||||| |||||| |  |||||| | | ||||||||||| | |||| ||||| |||||||||||| |||||||||||||||    
T  39093439 aaagggcagcccggtgcact-aaagcttctgcatatgcaagttccgggaagggttcccactattat-ggtgtattgtacacagtcttaccctgtt 39093531  T

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Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 47077859 - 47077933
Alignment:
Q  153 ggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgca 230  Q
    ||||||||||||||| || ||||||| |||||||| |||  |||||||||| |||||||  || ||||||||||||||    
T  47077859 ggcaatccggtgcac-tagagctcccgcatatgtagggtttgggaaggggtcccaccat--tttgtgtattgtacgca 47077933  T

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Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 16341394 - 16341322
Alignment:
Q  170 aaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| ||||||   ||||||||||| ||  |||||||| ||||||||||||||| || |||||||||||    
T  16341394 aaagctcccgcatatgataggtccgggaagagggcccaccatt-ttggtgtattgtacgtagccttaccctgtt 16341322  T

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Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 19266564 - 19266494
Alignment:
Q  171 aagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||| |||| | | ||||||||||||| | |||| |||  ||||||||||||||||| |||||||||||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaatt--tggtgtattgtacgcagccttaccctgtt 19266494  T

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Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 18747621 - 18747533
Alignment:
Q  150 aagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctg 241  Q
    |||||||  |||||||||| ||||||||| |||| | | ||| | ||||||||| ||||||  ||||||||||| ||||||| |||||||||    
T  18747621 aagggcagcccggtgcact-aaagctcccgcatacgcagggttcaggaaggggtcccacca--attggtgtattatacgcagccttaccctg 18747533  T

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Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 237
Target Start/End: Complemental strand, 29907552 - 29907469
Alignment:
Q  150 aagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttac 237  Q
    |||||||| |||||||||| ||||||||| ||||   | ||||||||| ||||| |||||||| ||||||||||| |||||| |||||    
T  29907552 aagggcaacccggtgcact-aaagctcccgcatac--agggtccgggatggggtcccaccatt-ttggtgtattgaacgcagccttac 29907469  T

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Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 14530457 - 14530362
Alignment:
Q  147 ataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||| |||||||||||||||||||||||| || |||||||||||    
T  14530457 ataaagggcaacccggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgtt 14530362  T

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Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 10543835 - 10543742
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  10543835 aaagggcaacccggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtt 10543742  T

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Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 9671314 - 9671223
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  9671314 aaagggcaacccggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 9671223  T

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Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 10546298 - 10546207
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  10546298 aaagggcaacccggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 10546207  T

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Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 24200623 - 24200716
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||| ||||||   | ||||||||||||| | |||||||| |||||||||||||||||| |||||||||||    
T  24200623 aaagggcaacccggtgcact-aaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgtt 24200716  T

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Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 1289158 - 1289093
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattat 214  Q
    |||||||||||||||||||| ||||||||| |||||| ||| ||||||||||||| ||||||||||    
T  1289158 aaagggcaatccggtgcactaaaagctcccgcatatgcatgatccgggaaggggtcccaccattat 1289093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 5841165 - 5841075
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    |||||||||  ||||||||| ||||||||| ||||||   ||||||||||||||| |||||||||||| |||||||||||||  ||||||||    
T  5841165 aaagggcaactcggtgcact-aaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccct 5841075  T

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Target: chr2; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 21779261 - 21779352
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| |||||||  |||||||||||||||||  |||||||||||    
T  21779261 aaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcaaccttaccctgtt 21779352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 23397902 - 23397811
Alignment:
Q  146 gataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    |||||||||||| |||||||||| | ||||||| |||||||| |||||| |||||||| ||||||||  |||||||||||||| || ||||||||    
T  23397902 gataaagggcaacccggtgcact-agagctcccgcatatgtagggtccgagaaggggtcccaccatt--tggtgtattgtacgtagccttaccct 23397811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 36871626 - 36871536
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  36871626 aaagggcaacccggtgcact-aaagctcccgcatacgca-ggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 36871536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 8455316 - 8455406
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgt 242  Q
    ||||||||| |||||||||| ||||||||  |||| | | ||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||    
T  8455316 aaagggcaacccggtgcact-aaagctccggcatacgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgt 8455406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 17668137 - 17668048
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctg 241  Q
    ||||||||| |||||||||| |||||||||| ||| | | ||| || |||||||||||||||||  ||||||||||||||||| |||||||||    
T  17668137 aaagggcaacccggtgcact-aaagctcccatatacgcagggttcgagaaggggttccaccatt--tggtgtattgtacgcagccttaccctg 17668048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 17623699 - 17623610
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctg 241  Q
    ||||||||| || ||||||| |||||| ||||||| | | | | ||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  17623699 aaagggcaacccagtgcact-aaagcttccacatacgcaggattcgggaaggggttccaccatt--tggtgtattgtacgcagccttaccctg 17623610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 30826170 - 30826083
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    ||||| ||||| |||||||| ||||||||| |||||||| |||| |||||||| ||||||||||  ||||||||||||||||  ||||||||    
T  30826170 aaaggacaatctggtgcact-aaagctcccgcatatgtagggtctgggaaggg-ttccaccatt--tggtgtattgtacgcaaccttaccct 30826083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 14444863 - 14444772
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| | |||||||| ||||||||| |||| | | ||||||||||||||| |||||||  ||||||||| |||| ||| |||||||||||    
T  14444863 aaagggcaacctggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtatcgtacacagccttaccctgtt 14444772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 22371150 - 22371098
Alignment:
Q  189 ggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  22371150 ggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 22371098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 24859992 - 24860067
Alignment:
Q  153 ggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcag 231  Q
    |||||||||||||||| ||||||||| |||| | | |||||| |||||||||| ||||||  |||||||||||||||||    
T  24859992 ggcaatccggtgcact-aaagctcccgcatacgcagggtccgagaaggggttctaccatt--tggtgtattgtacgcag 24860067  T

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Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 25249738 - 25249829
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||| | |||| | | ||| ||||||||| | ||||||||  ||||||||||||||||| |||||||||||    
T  25249738 aaagggcaacccggtgcact-aaagctcacgcatacgcagggttcgggaagggatcccaccatt--tggtgtattgtacgcagccttaccctgtt 25249829  T

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Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 25632644 - 25632553
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||||||| |||| ||| ||| ||||||||  | ||||||||  ||||||||||||||||| |||| ||||||    
T  25632644 aaagggcaacccggtgcact-aaagctcccgcatacgtaaggttcgggaaggaatcccaccatt--tggtgtattgtacgcagccttatcctgtt 25632553  T

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Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 32781327 - 32781379
Alignment:
Q  189 ggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||| |||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  32781327 ggtctgggaaggggtcccaccatt--tggtgtattgtacgcagtcttaccctgtt 32781379  T

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Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 40762234 - 40762321
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccc 239  Q
    ||||||||| |||||||||| |||||||||||||| | | ||||| |||| |||| |||||||  ||||||||||||||| || |||||||    
T  40762234 aaagggcaacccggtgcact-aaagctcccacatacgcagggtccaggaaagggtcccaccat--ttggtgtattgtacgtagccttaccc 40762321  T

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Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 19615085 - 19615036
Alignment:
Q  193 cgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  19615085 cgggaaggggt-ccactattattggtatattgtacgcagtcttaccctgtt 19615036  T

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Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 31158458 - 31158532
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||| |||| | | |||| |||||||||| |||||||| ||||| ||||||| ||| ||||||||||||    
T  31158458 taaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgtt 31158532  T

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Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 11514570 - 11514486
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttac 237  Q
    |||||||||||||||||||| ||||||||| |||| | | |||| |||||||| | ||||||||  ||||||||||||||||| |||||    
T  11514570 aaagggcaatccggtgcact-aaagctcccgcatacgcagggtctgggaaggg-tcccaccatt--tggtgtattgtacgcagccttac 11514486  T

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Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 12023929 - 12024010
Alignment:
Q  159 ccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||| |||||||| ||| ||| | | ||||||||| ||||| ||||||||  ||||||||||||||||| |||||||||||    
T  12023929 ccggtgca-ttaaagcttccaaatacgcagggtccgggagggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 12024010  T

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Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 243
Target Start/End: Original strand, 44449380 - 44449475
Alignment:
Q  146 gataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||| ||| || |||||| ||||| |||||||| | | | ||||||||||||||| |||| ||| |||||||||||||||||| |||| ||||||    
T  44449380 gataaagagcagtcaggtgca-ttaaaactcccacaaacgcagggtccgggaaggggtcccactatt-ttggtgtattgtacgcagccttatcctgtt 44449475  T

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Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 17896376 - 17896307
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    ||||||||||||||| | | |||||| |||||||| |||||||  ||||| |||||||||||| ||||||||    
T  17896376 taaagctcccacatacgcagggtccgagaaggggtcccaccat--ttggtatattgtacgcagccttaccct 17896307  T

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Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 23488618 - 23488535
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtc 233  Q
    |||| |||| |||||||||| ||||||| | |||| | | ||||||||||||||| |||||||| || |||||||| ||||||||    
T  23488618 aaagagcaacccggtgcact-aaagctctcgcatacgcagggtccgggaaggggtcccaccattttttgtgtattgcacgcagtc 23488535  T

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Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 4516370 - 4516430
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcag 231  Q
    ||||||| ||||||| | | ||||||||||||||| ||||||  |||||||||||||||||||    
T  4516370 taaagcttccacatacgcagggtccgggaaggggtcccacca--attggtgtattgtacgcag 4516430  T

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Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 13245114 - 13245181
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttacc 238  Q
    ||||||||||  ||||| ||||||||||||||||| |||||||  || ||||| ||||||||| ||||||    
T  13245114 taaagctcccgtatatgcatggtccgggaaggggtcccaccat--ttagtgtaatgtacgcagccttacc 13245181  T

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Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 21377093 - 21377164
Alignment:
Q  170 aaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||||||| | | ||| ||||||||||| |||||||  |||||| ||||||| ||| |||||||||||    
T  21377093 aaagctcccacatacgcagggttcgggaaggggtcccaccat--ttggtgcattgtacccagccttaccctgtt 21377164  T

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Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 19185762 - 19185823
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgca 230  Q
    |||||||||| |||| | | ||||| |||||||||||||||||| || ||| ||||||||||    
T  19185762 taaagctcccgcatacgcagggtccaggaaggggttccaccattttttgtgcattgtacgca 19185823  T

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Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 34080236 - 34080176
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccacca 210  Q
    ||||||||| |||||||||| ||| ||||| |||||| | ||||||||||||||| ||||||    
T  34080236 aaagggcaacccggtgcactaaaa-ctcccgcatatgcagggtccgggaaggggtcccacca 34080176  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 14544203 - 14544108
Alignment:
Q  147 ataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||||   |||||||| ||||||||| |||| | | ||||| ||||||||| | |||||| || |  ||||| ||||||||||||||||||    
T  14544203 ataaagggcaacttggtgcact-aaagctcccgcatacgcagggtcccggaaggggtccgaccattttttggttattgcacgcagtcttaccctgtt 14544108  T

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Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 41409995 - 41409936
Alignment:
Q  151 agggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccat 211  Q
    ||||||| |||||||||| || |||||| |||||| | ||||||||||||||| |||||||    
T  41409995 agggcaacccggtgcactgaa-gctcccgcatatgcagggtccgggaaggggtcccaccat 41409936  T

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Target: scaffold0049 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 59116 - 59021
Alignment:
Q  147 ataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||||| ||| |||||| ||||||||| |||| | |  ||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  59116 ataaagggcaacccgatgcact-aaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgtt 59021  T

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Target: scaffold0180 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 24133 - 24220
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccc 239  Q
    |||||||||||||||||||| | ||||||| |||||| | ||||||||||||||| |||||||  |||||||||||||||||| |||||||    
T  24133 aaagggcaatccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagccttaccc 24220  T

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Target: scaffold0015 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 48634 - 48725
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||    
T  48634 aaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 48725  T

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Target: scaffold0168 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 243
Target Start/End: Complemental strand, 30717 - 30621
Alignment:
Q  144 aagataaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||| ||||||||| |||||||||| | ||||||| |||||| | ||||||||||||||| |||||||  |||||||||||||||||| | |||||||||    
T  30717 aagaaaaagggcaacccggtgcact-agagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagccctaccctgtt 30621  T

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Target: scaffold0057 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 46966 - 46878
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct 240  Q
    ||||||||| |||||||||| ||||||||| |||| | | ||||||||||||||| |||||||  |||||||||||||||||  ||||||||    
T  46966 aaagggcaacccggtgcact-aaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcaaccttaccct 46878  T

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Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 24791 - 24863
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||| |||| | | ||| ||||||||||| ||||||||  |||||| |||||||||| |||||||||||    
T  24791 taaagctcccgcatacgcagggttcgggaaggggtcccaccatt--tggtgtgttgtacgcagccttaccctgtt 24863  T

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Target: scaffold0187 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 10052 - 10141
Alignment:
Q  151 agggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||| ||||||||||  | |||||  |||||| | ||||||||||||||| |||| |||  ||||||||||||||||||||||| |||||    
T  10052 agggcaacccggtgcactgga-gctcctgcatatgcagggtccgggaaggggtcccactatt--tggtgtattgtacgcagtcttactctgtt 10141  T

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Target: scaffold0187; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 20380 - 20469
Alignment:
Q  151 agggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||| ||||||||||  | |||||  |||||| | ||||||||||||||| |||| |||  ||||||||||||||||||||||| |||||    
T  20380 agggcaacccggtgcactgga-gctcctgcatatgcagggtccgggaaggggtcccactatt--tggtgtattgtacgcagtcttactctgtt 20469  T

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Target: scaffold0311 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 10926 - 10854
Alignment:
Q  169 taaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    |||||||||| |||| | | ||||||||||||||| |||||||  ||||||||||| |||||| | |||||||||    
T  10926 taaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattggacgcagccctaccctgtt 10854  T

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Target: scaffold0258 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 13024 - 13115
Alignment:
Q  149 aaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt 243  Q
    ||||||||| |||||||||| ||||| ||| |||| | | |||| |||||||||| ||||||||   |||||||||||||||| |||||| ||||    
T  13024 aaagggcaacccggtgcact-aaagcccccgcatacgcagggtctgggaaggggtcccaccattc--ggtgtattgtacgcagccttaccttgtt 13115  T

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Target: scaffold0254 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 4256 - 4214
Alignment:
Q  189 ggtccgggaaggggttccacca-ttattggtgtattgtacgca 230  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  4256 ggtccgggaaggggtcccaccaattattggtgtattgtacgca 4214  T

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Target: scaffold0223 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 11265 - 11179
Alignment:
Q  148 taaagggcaatccggtgcacttaaagctcccacatatgtatggtccgggaaggggttccaccattattggtgtattgtacgcagtcttac 237  Q
    |||||||||| | |||||||| | ||||||| |||||| | |||||||||||| || |||||||  ||||||||||||| |||| |||||    
T  11265 taaagggcaacctggtgcact-agagctcccgcatatgcagggtccgggaaggtgtcccaccat--ttggtgtattgtaagcagccttac 11179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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