View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14231_low_37 (Length: 247)
Name: NF14231_low_37
Description: NF14231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14231_low_37 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 2722527 - 2722756
Alignment:
| Q |
16 |
cagaaatgactaaagtccaaaagcacacatataataaatcttaaaaagaatttagaatatttagttgtcatttcgattataattctcagtgctgagcctt |
115 |
Q |
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| T |
2722527 |
cagaaatgactaaagtccaaaagcaca--tataataaatcttaaaaagaatttagaatatttagttgtcatttcgattataattctcagtgctgagcctt |
2722624 |
T |
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| Q |
116 |
tctttcattttgttttgttcctaagttattcagattcaagacacatgaaatccaaattttagatcatagagagagagtccccttatttacaacttttatt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2722625 |
tctttcattttgttttgttcctaagttattcagattcaagacacatgaaatccaaattttagatcatagagagagagtccccttatttacaacttttatt |
2722724 |
T |
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| Q |
216 |
gtccaactttaattaataataaaagtatattt |
247 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
2722725 |
gtccaactttaattaataataaaagtatattt |
2722756 |
T |
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