View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14231_low_41 (Length: 242)

Name: NF14231_low_41
Description: NF14231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14231_low_41
NF14231_low_41
[»] chr6 (9 HSPs)
chr6 (1-113)||(25096552-25096664)
chr6 (170-240)||(12696344-12696414)
chr6 (172-232)||(3398646-3398706)
chr6 (170-242)||(9024145-9024217)
chr6 (192-242)||(9025485-9025535)
chr6 (196-242)||(20576628-20576674)
chr6 (197-242)||(29049903-29049946)
chr6 (205-242)||(7569172-7569209)
chr6 (201-242)||(13364705-13364746)
[»] chr1 (9 HSPs)
chr1 (170-240)||(1486678-1486748)
chr1 (192-242)||(20157341-20157391)
chr1 (195-242)||(21038101-21038148)
chr1 (195-242)||(44482248-44482295)
chr1 (201-242)||(1864880-1864921)
chr1 (197-242)||(6427368-6427413)
chr1 (197-242)||(36906015-36906060)
chr1 (203-239)||(13436479-13436515)
chr1 (198-242)||(34371731-34371775)
[»] chr5 (11 HSPs)
chr5 (196-242)||(15410443-15410489)
chr5 (192-240)||(38749554-38749602)
chr5 (181-240)||(43001820-43001879)
chr5 (190-242)||(6471878-6471930)
chr5 (170-242)||(39205898-39205970)
chr5 (203-242)||(2548405-2548444)
chr5 (176-242)||(23015964-23016030)
chr5 (202-242)||(19737483-19737523)
chr5 (170-242)||(30502362-30502429)
chr5 (170-242)||(30542705-30542772)
chr5 (198-242)||(36838561-36838605)
[»] chr8 (7 HSPs)
chr8 (198-242)||(11803277-11803321)
chr8 (204-242)||(3508070-3508108)
chr8 (196-242)||(14634136-14634182)
chr8 (201-242)||(7658481-7658522)
chr8 (170-242)||(12559074-12559147)
chr8 (199-240)||(22493514-22493555)
chr8 (200-240)||(7442865-7442905)
[»] chr7 (17 HSPs)
chr7 (195-242)||(17307911-17307958)
chr7 (170-240)||(5409805-5409875)
chr7 (171-240)||(32093990-32094059)
chr7 (172-240)||(13770711-13770779)
chr7 (195-242)||(8160434-8160481)
chr7 (192-242)||(5233647-5233697)
chr7 (170-240)||(9778520-9778590)
chr7 (196-242)||(22602705-22602751)
chr7 (198-232)||(23128658-23128692)
chr7 (200-242)||(36314626-36314668)
chr7 (195-232)||(3142072-3142109)
chr7 (209-242)||(4909169-4909202)
chr7 (195-240)||(15902842-15902887)
chr7 (174-223)||(21138969-21139018)
chr7 (209-242)||(27732247-27732280)
chr7 (174-242)||(1433472-1433540)
chr7 (192-232)||(33384573-33384613)
[»] chr3 (10 HSPs)
chr3 (170-242)||(8039798-8039876)
chr3 (170-232)||(29508472-29508535)
chr3 (170-240)||(40993309-40993374)
chr3 (192-240)||(25948878-25948926)
chr3 (195-242)||(16192744-16192791)
chr3 (203-242)||(20691337-20691376)
chr3 (173-242)||(5441005-5441072)
chr3 (170-240)||(27505266-27505336)
chr3 (210-242)||(4704301-4704333)
chr3 (198-242)||(29386508-29386552)
[»] chr4 (6 HSPs)
chr4 (192-242)||(18513232-18513282)
chr4 (206-242)||(46180941-46180977)
chr4 (193-242)||(15659752-15659801)
chr4 (203-240)||(15835640-15835677)
chr4 (170-242)||(36635342-36635415)
chr4 (173-201)||(21945557-21945585)
[»] chr2 (4 HSPs)
chr2 (170-239)||(41843462-41843531)
chr2 (203-242)||(18889593-18889632)
chr2 (192-241)||(44776618-44776667)
chr2 (210-242)||(15909641-15909673)
[»] scaffold0171 (1 HSPs)
scaffold0171 (184-240)||(23440-23496)
[»] scaffold0024 (1 HSPs)
scaffold0024 (192-242)||(18099-18149)
[»] scaffold0022 (1 HSPs)
scaffold0022 (197-242)||(99911-99956)
[»] scaffold0020 (1 HSPs)
scaffold0020 (197-242)||(137798-137843)


Alignment Details
Target: chr6 (Bit Score: 89; Significance: 5e-43; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 25096664 - 25096552
Alignment:
Q  1 tcatcaaatccagcattctcaagcatctgtgaatgatttagaatattagtatcatatcatgtaatagaaattaattcaaaaatgtttcaaatcaaaagtt 100  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  25096664 tcatcaaatccagcattctcaagcatctgtgaatcatttacaatattagtagcatatcttgtaattgaaataaattcaaaaatgtttcaaatcaaaagtt 25096565  T
Q  101 atattgaataact 113  Q
    |||||||||||||    
T  25096564 atattgaataact 25096552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 12696414 - 12696344
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaatttt 240  Q
    |||||||||| |||| ||||| |||||||||| ||||  |||| | | |||||||||||||||||||||||    
T  12696414 tcccggtgtcagacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgtaatttt 12696344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 3398706 - 3398646
Alignment:
Q  172 ccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattat 232  Q
    ||||||||||||||||||| ||||| |||| ||||| | || ||| |||||||||||||||    
T  3398706 ccggtgtcggacatgtgtcgtgtccaacacgacaccgatacttataattacactgaattat 3398646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 9024145 - 9024217
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||||||| ||| ||||  | |||||||||| ||||  ||||||||||||||| |||||||||| |||||||    
T  9024145 tcccggtgttggatatgtcccgtgtccgacacgacactgacacatatgattacattgaattatgtcattttct 9024217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 9025485 - 9025535
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||| ||||| ||||| |||||||| ||||||||||||||||| |||||||    
T  9025485 tgtcggacacgacaccgacacatataattacactgaattatgtgattttct 9025535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 20576628 - 20576674
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||||| |||||||||| ||| |||||||||||||||| ||||||||    
T  20576628 cgacacgacaccaacacttataattacactgaattatgcaattttct 20576674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 29049946 - 29049903
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||||    
T  29049946 gacacaacaccaacacat--gattacattgaattatgtaattttct 29049903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 7569172 - 7569209
Alignment:
Q  205 accaacacatatgattacactgaattatgtaattttct 242  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  7569172 accaacacctataattacactgaattatgtaattttct 7569209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 13364705 - 13364746
Alignment:
Q  201 caacaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||||| |||||||||||||||||||||||| | |||||||    
T  13364705 caacaccgacacatatgattacactgaattatatgattttct 13364746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 1486678 - 1486748
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaatttt 240  Q
    ||||||||||||||| ||||| |||||||||| ||||| |||| ||| ||||||||||||||||| |||||    
T  1486678 tcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgatttt 1486748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 20157341 - 20157391
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||| ||||| ||||| |||||||||||||||||||||||||| |||||||    
T  20157341 tgtcggacacgacaccgacacatatgattacactgaattatgtgattttct 20157391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 21038148 - 21038101
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||||| ||||  || |||||||||||||||||||||||||||||||    
T  21038148 ccgacacgacactgacgcatatgattacactgaattatgtaattttct 21038101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 44482295 - 44482248
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||||| ||||| |||||||| ||||||||||||||||| |||||||    
T  44482295 ccgacacgacaccgacacatataattacactgaattatgtgattttct 44482248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 1864880 - 1864921
Alignment:
Q  201 caacaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||||| |||||||| ||||||||||||||||| |||||||    
T  1864880 caacaccgacacatataattacactgaattatgtgattttct 1864921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 6427413 - 6427368
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||| |||||||||||||| |||||| |||||||||| |||||||    
T  6427413 gacacgacaccaacacatataattacattgaattatgtgattttct 6427368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 36906060 - 36906015
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||||||| ||||||||||| ||||| ||||||||||| |||||||    
T  36906060 gacacaacgccaacacatataattactctgaattatgtgattttct 36906015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 13436515 - 13436479
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattt 239  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  13436515 acaccaacacatataattacactgaattatgtgattt 13436479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 34371775 - 34371731
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||| ||||| |||||||| ||||||||||||||||| |||||||    
T  34371775 acacgacaccgacacatataattacactgaattatgtgattttct 34371731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 15410443 - 15410489
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||||||||||||||||||||||||||||||||| || |||||||||    
T  15410443 cgacacaacaccaacacatatgattacactgaatcatataattttct 15410489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 38749554 - 38749602
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaatttt 240  Q
    ||||||||||||||||||||||||| |||||| |||||||||| |||||    
T  38749554 tgtccgacacaacaccaacacatataattacattgaattatgtcatttt 38749602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 43001879 - 43001820
Alignment:
Q  181 gacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaatttt 240  Q
    |||| ||||| ||||||||||| ||||||||| | | |||||||||||||||||||||||    
T  43001879 gacacgtgtcgtgtccgacacatcaccaacacttgtaattacactgaattatgtaatttt 43001820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 6471878 - 6471930
Alignment:
Q  190 catgtccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||||| |||| ||||| |||||||| ||||||||||||||||| |||||||    
T  6471878 catgtcccacacgacacccacacatataattacactgaattatgtgattttct 6471930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 39205970 - 39205898
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||||||||||| || ||||| |||| ||||| |||||||||||||| |||||||  |||||| | |||||||    
T  39205970 tcccggtgtcgggcacgtgtcgtgtcggacacgacaccaacacatataattacacctaattatatgattttct 39205898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 2548444 - 2548405
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  2548444 acaccgacacttatgattacactgaattatgtaattttct 2548405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 23015964 - 23016030
Alignment:
Q  176 tgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||||||||  |||| ||||||| |||||| | |||| ||| ||||||||||||||||| |||||||    
T  23015964 tgtcggacacatgtcgtgtccgatacaacatcgacacctataattacactgaattatgtgattttct 23016030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 19737483 - 19737523
Alignment:
Q  202 aacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||||| |||||||||||| || ||||||||||||||||||    
T  19737483 aacaccgacacatatgattgcattgaattatgtaattttct 19737523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 30502362 - 30502429
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||| |||||||||||||||| ||||||||||     | |||||||| |||||||||||||| || |||||||    
T  30502362 tcccagtgtcggacatgtgtcgtgtccgacac-----cgacacatataattacactgaattaagtgattttct 30502429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 30542705 - 30542772
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||| |||||||||||||||| ||||||||||     | |||||||| |||||||||||||| || |||||||    
T  30542705 tcccagtgtcggacatgtgtcgtgtccgacac-----cgacacatataattacactgaattaagtgattttct 30542772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 36838605 - 36838561
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||| ||||| |||||||| |||||||| ||||||||||||||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaattttct 36838561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000005; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 11803321 - 11803277
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||    
T  11803321 acacaacaccaacacatataattacactgaattatgtgattttct 11803277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 3508108 - 3508070
Alignment:
Q  204 caccaacacatatgattacactgaattatgtaattttct 242  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  3508108 caccaacacatatgattacattgaattatgttattttct 3508070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 14634136 - 14634182
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||||| ||||||||| |||| ||||||||||||||| |||||||||    
T  14634136 cgacacgacaccaacaaatataattacactgaattatataattttct 14634182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 7658522 - 7658481
Alignment:
Q  201 caacaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||||| ||| |||| |||||||||||||||||||||||||    
T  7658522 caacaccgacaaatataattacactgaattatgtaattttct 7658481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 12559074 - 12559147
Alignment:
Q  170 tcccggtgtcggacatgtgtca-tgtccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||| ||||||||| |||||  ||||||| |  ||||||| |||||||||||||||||||||| | |||||||    
T  12559074 tcccgttgtcggacacgtgtcggtgtccgagatgacaccaatacatatgattacactgaattatatcattttct 12559147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 22493555 - 22493514
Alignment:
Q  199 cacaacaccaacacatatgattacactgaattatgtaatttt 240  Q
    ||||||||| ||| |||||||||||||||||||||| |||||    
T  22493555 cacaacaccgacatatatgattacactgaattatgtgatttt 22493514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 7442905 - 7442865
Alignment:
Q  200 acaacaccaacacatatgattacactgaattatgtaatttt 240  Q
    ||||||||||||| | | |||||||||||||||||||||||    
T  7442905 acaacaccaacacttgtaattacactgaattatgtaatttt 7442865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 17307958 - 17307911
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  17307958 ccgacacgacaccaacacatataattacactgaattatgttattttct 17307911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 5409805 - 5409875
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaatttt 240  Q
    ||||||||||||||| ||||| |||||||||| ||||| |||| | | ||| ||||||||||||| |||||    
T  5409805 tcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtgatttt 5409875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 32093990 - 32094059
Alignment:
Q  171 cccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaatttt 240  Q
    |||||||||||||| ||||| |||||||||| ||||| |||  | | ||||||||||||||||| |||||    
T  32093990 cccggtgtcggacacgtgtcgtgtccgacacgacaccgacatttgtaattacactgaattatgtgatttt 32094059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 13770779 - 13770711
Alignment:
Q  172 ccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaatttt 240  Q
    ||||||||||||| ||||  |||||||||| ||| | |||| | | |||||||||||||||||||||||    
T  13770779 ccggtgtcggacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatgtaatttt 13770711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 8160481 - 8160434
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||||| | |||||||||||| |||||||| ||||||||||||||||    
T  8160481 ccgacacgataccaacacatataattacactaaattatgtaattttct 8160434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 5233697 - 5233647
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||| |||||||||||||||||||| ||||||||  ||||||| |||||||    
T  5233697 tgtcggacacaacaccaacacatataattacactagattatgtgattttct 5233647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 9778590 - 9778520
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaatttt 240  Q
    ||||||||||||||| ||||  |||||||||| ||||| |||| | | |||| |||||||||||| |||||    
T  9778590 tcccggtgtcggacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaattatgtgatttt 9778520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 22602705 - 22602751
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||||| ||||| |||||||| ||||||||||||||||| |||||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtgattttct 22602751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 232
Target Start/End: Original strand, 23128658 - 23128692
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattat 232  Q
    |||||||||| ||||||||||||||||||||||||    
T  23128658 acacaacaccgacacatatgattacactgaattat 23128692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 36314626 - 36314668
Alignment:
Q  200 acaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||||||||||||||||||||||| |||| ||||| |||||||    
T  36314626 acaacaccaacacatatgattacattgaaatatgtcattttct 36314668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 3142072 - 3142109
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattat 232  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  3142072 ccgacacaacaccgacacatatgattacattgaattat 3142109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 209 - 242
Target Start/End: Complemental strand, 4909202 - 4909169
Alignment:
Q  209 acacatatgattacactgaattatgtaattttct 242  Q
    ||||||||||||||| ||||||||||||||||||    
T  4909202 acacatatgattacaatgaattatgtaattttct 4909169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 15902887 - 15902842
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaatttt 240  Q
    ||||||||||||| |||||||| |||||||| |||||||| |||||    
T  15902887 ccgacacaacaccgacacatataattacactaaattatgtgatttt 15902842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 21138969 - 21139018
Alignment:
Q  174 ggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattaca 223  Q
    ||||||||||| || ||||||||||||| ||||| |||||||| ||||||    
T  21138969 ggtgtcggacacgtatcatgtccgacacgacaccgacacatataattaca 21139018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 209 - 242
Target Start/End: Original strand, 27732247 - 27732280
Alignment:
Q  209 acacatatgattacactgaattatgtaattttct 242  Q
    |||||||| |||||||||||||||||||||||||    
T  27732247 acacatataattacactgaattatgtaattttct 27732280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 1433540 - 1433472
Alignment:
Q  174 ggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||||||||||  |||| |||||||||| ||||| |||||||| |||||||  ||| |||| |||||||    
T  1433540 ggtgtcggacacatgtcttgtccgacacgacaccgacacatataattacaccaaatgatgtgattttct 1433472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 33384573 - 33384613
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattat 232  Q
    |||||||||| |||||||||||||| |||||||| ||||||    
T  33384573 tgtccgacaccacaccaacacatataattacactaaattat 33384613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 8039798 - 8039876
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacaca------acaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||||||||||||||||| |||||||||||||       ||||| |||||||| ||||||||||||||| |||||||||    
T  8039798 tcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaattatataattttct 8039876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 29508535 - 29508472
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgaca-caacaccaacacatatgattacactgaattat 232  Q
    |||||||||||||| |||||| ||||||||| ||||| | |||||||| |||||||||||||||    
T  29508535 tcccggtgtcggacgtgtgtcgtgtccgacaccaacatcgacacatataattacactgaattat 29508472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 40993309 - 40993374
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaatttt 240  Q
    ||||||||||||||||||||| ||||||||||     | |||||||| ||||||||||||||||| |||||    
T  40993309 tcccggtgtcggacatgtgtcgtgtccgacac-----cgacacatataattacactgaattatgtgatttt 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 25948878 - 25948926
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaatttt 240  Q
    |||||||||| |||||||||| ||| ||||||||||||||||| |||||    
T  25948878 tgtccgacacgacaccaacacttataattacactgaattatgtgatttt 25948926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 16192744 - 16192791
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||||| ||| |||||||||| ||||||||||||||||| |||||||    
T  16192744 ccgacacgacatcaacacatataattacactgaattatgttattttct 16192791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 20691376 - 20691337
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  20691376 acaccgacacatatgattacactgaattatgtcattttct 20691337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 5441005 - 5441072
Alignment:
Q  173 cggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||||| ||||||||||| |||| ||||||||||| |||||||  ||| || |||||||||| |||||||    
T  5441005 cggtgttggacatgtgtcgtgtctgacacaacaccgacacata--attccattgaattatgtgattttct 5441072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 27505336 - 27505266
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaatttt 240  Q
    ||||||||||||||| ||||| |||| ||||| ||||| |||| | | |||||||| |||||||| |||||    
T  27505336 tcccggtgtcggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatgtgatttt 27505266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 4704301 - 4704333
Alignment:
Q  210 cacatatgattacactgaattatgtaattttct 242  Q
    ||||||||||||||||||||||||| |||||||    
T  4704301 cacatatgattacactgaattatgtcattttct 4704333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 29386508 - 29386552
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||| ||||| ||||||||||||||||||||||||| | ||||||    
T  29386508 acacgacaccgacacatatgattacactgaattatgcagttttct 29386552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.00000000008; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 18513232 - 18513282
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||||||||||||||  ||||||||||||||| |||||||||| |||||||    
T  18513232 tgtccgacacaacactgacacatatgattacattgaattatgtcattttct 18513282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 46180941 - 46180977
Alignment:
Q  206 ccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||||||||||||||||||||||||||| |||||||    
T  46180941 ccaacacatatgattacactgaattatgttattttct 46180977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 15659752 - 15659801
Alignment:
Q  193 gtccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||||||| |||||||||||||| ||||||| ||||||||  |||||||    
T  15659752 gtccgacacgacaccaacacatataattacaccgaattatgagattttct 15659801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 240
Target Start/End: Original strand, 15835640 - 15835677
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaatttt 240  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  15835640 acaccaacacatatgattacacggaattatataatttt 15835677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 36635415 - 36635342
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacaca-acaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||||||||| |||  ||||| |||| |||||  |||| ||||||||| ||||||||||||||||| |||||||    
T  36635415 tcccggtgtctgacgcgtgtcgtgtctgacactcacacgaacacatataattacactgaattatgtgattttct 36635342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 201
Target Start/End: Complemental strand, 21945585 - 21945557
Alignment:
Q  173 cggtgtcggacatgtgtcatgtccgacac 201  Q
    |||||||||||||||||||||||||||||    
T  21945585 cggtgtcggacatgtgtcatgtccgacac 21945557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 41843531 - 41843462
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattt 239  Q
    |||| |||||||||| |||||  ||||||||||||||| |||||||| |||| || ||||||||| ||||    
T  41843531 tccccgtgtcggacacgtgtcgcgtccgacacaacaccgacacatataattataccgaattatgtgattt 41843462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 18889593 - 18889632
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  18889593 acaccgacacatatgattacactgaattatgtgattttct 18889632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 44776667 - 44776618
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttc 241  Q
    |||||||||| ||||| ||| ||||||||||||||| |||||| ||||||    
T  44776667 tgtccgacacgacaccgacatatatgattacactgagttatgtcattttc 44776618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 15909641 - 15909673
Alignment:
Q  210 cacatatgattacactgaattatgtaattttct 242  Q
    ||||||| |||||||||||||||||||||||||    
T  15909641 cacatataattacactgaattatgtaattttct 15909673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 23496 - 23440
Alignment:
Q  184 atgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaatttt 240  Q
    ||||||| |||||||||| ||||| |||| ||| ||||||||||||||||| |||||    
T  23496 atgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgatttt 23440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 18099 - 18149
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||||||||||||||||||| |  ||||||| |||||||||| |||||||    
T  18099 tgtccgacacaacaccaacacttgcgattacattgaattatgttattttct 18149  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 99956 - 99911
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||| |||||||||||||| |||||| |||||||||| |||||||    
T  99956 gacacgacaccaacacatataattacattgaattatgttattttct 99911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 137843 - 137798
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    ||||| |||||||||||||||| ||||||||||| ||| |||||||    
T  137843 gacacgacaccaacacatatgactacactgaattgtgtgattttct 137798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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