View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14232_high_13 (Length: 273)
Name: NF14232_high_13
Description: NF14232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14232_high_13 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 15 - 229
Target Start/End: Original strand, 32036464 - 32036678
Alignment:
| Q |
15 |
caaaggagcagcttgaagaagcttatcataatatctcacttgattaccctctgatgatctaacttccatttctttgtcacacacttcattgccacttcat |
114 |
Q |
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| T |
32036464 |
caaaggagcagcttgaagaagcttatcataatatctcacttgattaccctctgatgatctaacttccatttctttgtcacacacttcattgccacttcat |
32036563 |
T |
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| Q |
115 |
caccataaccttcaaacacttttcacagccaaaatcaacacaaatctgcaacaaacgaacaaaaacatcatcgtacataagtagtacattgcaaaattag |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32036564 |
caccataaccttcaaacacttttcacagccaaaatcaacacaaatctgcaacaaacgaacaaaaacatcatcgtacataagtagtacattgcaaaattag |
32036663 |
T |
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| Q |
215 |
tgattttatggaaag |
229 |
Q |
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| T |
32036664 |
tgattttatggaaag |
32036678 |
T |
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