View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14232_high_18 (Length: 249)
Name: NF14232_high_18
Description: NF14232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14232_high_18 |
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Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 2 - 234
Target Start/End: Original strand, 17103259 - 17103491
Alignment:
| Q |
2 |
catcagacacaccatatctaaatgtaattcaaagtccacacacacactctcctactctcagtctcattcatattcacaagaaaattaaactatactagac |
101 |
Q |
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| T |
17103259 |
catcagacacaccatatctaaatgtaattcaaagtccacacacacactctcctactctcagtctcattcatattcacaagaaaaataaactatactagac |
17103358 |
T |
|
| Q |
102 |
tctagcaaaatggcctctacacaatgcttcttgcacccccaatatgctcttacaactccatctagaagtttgtctcaacgccaaattgttaccaacaaat |
201 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
17103359 |
tctagcaaaatggcctctacacaatgcttcttgcacccccaatatgctcttacaactccatctagaagtttgtctcagcgccaaattgttaccaacaaac |
17103458 |
T |
|
| Q |
202 |
caaaccatattgtttgcaaggcacagaaacaag |
234 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
17103459 |
caaaccatattgtttgcaaggcacagaaacaag |
17103491 |
T |
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