View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14232_high_23 (Length: 207)
Name: NF14232_high_23
Description: NF14232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14232_high_23 |
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Alignment Details
Target: chr3 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 40027650 - 40027461
Alignment:
| Q |
1 |
tccgacgacgacaacgatctcatcgacagcaacaataacagtaatgatgataacattaatagtatcagcaaaaggaaggccatgtctcctgagcctccag |
100 |
Q |
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| T |
40027650 |
tccgacgacgacaacgatctcatcgacagcaacaataacagtaatgatgataacagtaatagtatcagcaaaaggaaggccatgtctcctgagcctccag |
40027551 |
T |
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| Q |
101 |
agagatcaatgcccaaaataaaagggttggcggtggtggtgtaaacataaaaaagtacagattaagagtggttgttgcatgcatattatt |
190 |
Q |
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| T |
40027550 |
agagatcaatgcccaaaatgaaagggttggcggtggtggtgtaaacataaaaaagtacagattaagagtggttgttgcatgcatattatt |
40027461 |
T |
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