View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14232_low_22 (Length: 239)
Name: NF14232_low_22
Description: NF14232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14232_low_22 |
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Alignment Details
Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 16 - 225
Target Start/End: Complemental strand, 2485951 - 2485742
Alignment:
| Q |
16 |
atatcaacattcctttctgttccatttttaatttactttcaaaaaattaaacgtaaaaactgaatgaatatgtatccaatacgtgaatgttgaaaatttt |
115 |
Q |
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| T |
2485951 |
atatcaacattcctttctgttccatttttaatttactttcaaaaaattaaccgtaaaaactgaatgaatatgtatccaatacgtgaatgttgaaaatttt |
2485852 |
T |
|
| Q |
116 |
agagagatatggaagaaggatcaatcatgtcctttgttttcatggtagtaaggtaatgtgtgttttgatttctggaaatggtgatcttatgagagttccc |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2485851 |
agagagatatggaagaaggatcaatcatgtcctttgttttcatggtattaaggtaatgtgtgttttgatttctggaaatggtgatcttatgagagttccc |
2485752 |
T |
|
| Q |
216 |
gctatctctg |
225 |
Q |
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||||| |||| |
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| T |
2485751 |
gctatttctg |
2485742 |
T |
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