View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14232_low_6 (Length: 453)
Name: NF14232_low_6
Description: NF14232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14232_low_6 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 391; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 30 - 453
Target Start/End: Complemental strand, 49086045 - 49085618
Alignment:
| Q |
30 |
ggcacagaaataatgtaagaacggacgaaatcattcctgcaaatgcaattcttccagctaaaagcaggatcttggcctcatcgttattagacataagcat |
129 |
Q |
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| T |
49086045 |
ggcacagaaataatgtaagaacggacgaaatcattcctgcaaatgcaattcttccagctaaaagcaggatcttggcttcatcgttattagacataagcat |
49085946 |
T |
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| Q |
130 |
actagttaaaccacagccctaacaagtaagatttaca----cgaggtacaataaaaaattcaaatcaatcactacataataattacaatcctaaatttgt |
225 |
Q |
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|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49085945 |
gctagttaaaccacagccctaacaagtaagatttaaataaacgaggtacaataaaaaattcaaatcaatcactacataataattacaatcctaaatttgt |
49085846 |
T |
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| Q |
226 |
aggagacagtcaatgagtcaatataattaacaaacaagccgacagaaagcactaaaaatgctattaaaaacaatttgatttcactagacctacactacag |
325 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49085845 |
aggagacagtcaatgagtcaatgtaattaacaaacaagccgacagaaagcactaaaaatgctattaaaaacaatttgatttcactagacctacactacag |
49085746 |
T |
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| Q |
326 |
ttaaccattgttgagtcaaattagtgttcaagtcagactgtaaatcaataatgaaggtaacttgaaacaaaacaatctcagtagcctctggtttcagcta |
425 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49085745 |
ttaaccattgttgagtcaaattagtgttcaagtcagactgtaaatcaataatgaaggtaacttgaaacaaaacaatctcagtagcctctggtttcagcta |
49085646 |
T |
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| Q |
426 |
ctggaacttcaccctgtacttggcgaac |
453 |
Q |
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| T |
49085645 |
ccggaacttcaccctgtacttggcgaac |
49085618 |
T |
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