View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14233_low_9 (Length: 232)
Name: NF14233_low_9
Description: NF14233
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14233_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 25 - 202
Target Start/End: Original strand, 17875533 - 17875710
Alignment:
| Q |
25 |
agaaggagcacagaatcccataaaaatagtgttagagagagatagagtttgcaaacaaacacagtgtcaactctaagctgtaagctgcagaatttggatg |
124 |
Q |
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| T |
17875533 |
agaaagagcacagaatcccataaaaatagtgttagagagagatagaggttgcaaacaaacacagtgtcaactctaagctgtaagctgcagaatttggatg |
17875632 |
T |
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| Q |
125 |
atgggaactcaactcggtactatttgactcactgactcattcatcattcaactcctactaaaaagtaagtaaaagggt |
202 |
Q |
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| T |
17875633 |
atgggaactcaactcggtactatttgactcactgactcattcatcattcaactcctactaaaaagtaagtaaaagggt |
17875710 |
T |
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