View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14234_high_28 (Length: 323)
Name: NF14234_high_28
Description: NF14234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14234_high_28 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 12 - 323
Target Start/End: Original strand, 13080776 - 13081081
Alignment:
| Q |
12 |
gagaagaaaaatacatagaaatagaattaatatgaaataaaacatgattaagaacaacatgttcatctcaatttggtcttaatttgcttagtgtgagttt |
111 |
Q |
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| T |
13080776 |
gagaagaaaaagacatagaaatagaattaatatgaaataaaacatgattaagaacaacatgttcatctcaatttggtcttagtttgcttagtgtgagttt |
13080875 |
T |
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| Q |
112 |
gtgcttgtgtttgtgtttgtgagagttatgagatgtgagcatgttaacgttgcttaattaagtggaaactcatcctataaaaaataaattaattaagggg |
211 |
Q |
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| T |
13080876 |
gtgcttgt------gtttgtgagagttatgagatgtgagcatgttaacgttgcttaattaagtggaagttcatcctataaaaaataaattaattaagggg |
13080969 |
T |
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| Q |
212 |
agattaattaatacctcatgtgctgcaagtgcatgatctatagtagacatgtgcgatgaatttttaacgttgttgaagttgccaatatttatacttgcgt |
311 |
Q |
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| T |
13080970 |
agattaattaatacctcatgtgctgcaagtgcatgatctatagtagacatgtgtgatgaatttttaacgttgttgaagttgacaatatttatacttgcgt |
13081069 |
T |
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| Q |
312 |
tgtgtgcatgat |
323 |
Q |
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| T |
13081070 |
tgtgtgcatgat |
13081081 |
T |
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