View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14234_high_44 (Length: 272)
Name: NF14234_high_44
Description: NF14234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14234_high_44 |
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Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 52624363 - 52624609
Alignment:
| Q |
9 |
aagcataggctgatatgttgatagattttattacaaaattccactaattaactgctttaacacacccgcaatctgacaaatacacga-tacaacagattc |
107 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |
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| T |
52624363 |
aagcataggctgatatgttgatagattttattacaaaattccactaattaactgctttaacacacccgcaatctgacaaatacaccaatacaacagattc |
52624462 |
T |
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| Q |
108 |
actcacattcaccaataggcaataacacaacagcactcaacaaccaattaagagaaattttaaatgataacaacaatgacacatttcaaaagttatttag |
207 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52624463 |
actcacattcaccaataggcaatatcacaacagcactcaacaaccaattaagagaaattttaaatgataacaacaatgacacatttcaaaagttatttag |
52624562 |
T |
|
| Q |
208 |
ctacactttgactggaagtataaaggttgaccagccgccaatacatg |
254 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52624563 |
ctacactttgactggaagtataaaggttgaccagccgccaatacatg |
52624609 |
T |
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