View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14234_high_48 (Length: 262)

Name: NF14234_high_48
Description: NF14234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14234_high_48
NF14234_high_48
[»] scaffold0208 (3 HSPs)
scaffold0208 (126-223)||(6776-6873)
scaffold0208 (1-113)||(6603-6714)
scaffold0208 (1-99)||(12476-12573)
[»] chr8 (20 HSPs)
chr8 (1-130)||(42992954-42993083)
chr8 (1-112)||(32890969-32891079)
chr8 (4-107)||(1882725-1882828)
chr8 (1-98)||(9935359-9935455)
chr8 (1-98)||(32897093-32897189)
chr8 (1-99)||(39727299-39727399)
chr8 (1-99)||(7771312-7771409)
chr8 (1-98)||(14799399-14799495)
chr8 (1-98)||(14418021-14418114)
chr8 (1-112)||(39735517-39735631)
chr8 (1-99)||(10705923-10706021)
chr8 (1-98)||(5542143-5542239)
chr8 (1-98)||(36819051-36819147)
chr8 (51-109)||(10700139-10700197)
chr8 (1-99)||(24250183-24250279)
chr8 (1-72)||(31379430-31379501)
chr8 (12-93)||(1171414-1171493)
chr8 (1-91)||(22219706-22219796)
chr8 (1-70)||(31399047-31399116)
chr8 (41-76)||(39689782-39689817)
[»] scaffold0440 (1 HSPs)
scaffold0440 (1-98)||(1176-1273)
[»] chr7 (16 HSPs)
chr7 (1-112)||(3817280-3817390)
chr7 (1-115)||(339451-339564)
chr7 (1-99)||(42767276-42767374)
chr7 (1-99)||(351866-351963)
chr7 (4-99)||(12804083-12804177)
chr7 (1-98)||(35147986-35148083)
chr7 (1-98)||(3811152-3811248)
chr7 (1-98)||(28420942-28421038)
chr7 (1-99)||(20239031-20239128)
chr7 (1-76)||(43540065-43540140)
chr7 (1-98)||(5979156-5979253)
chr7 (6-98)||(5849610-5849702)
chr7 (3-112)||(26381151-26381258)
chr7 (3-98)||(26383708-26383806)
chr7 (1-99)||(22741900-22742004)
chr7 (4-57)||(30219269-30219322)
[»] chr5 (18 HSPs)
chr5 (1-112)||(28531451-28531561)
chr5 (1-112)||(32096929-32097040)
chr5 (1-113)||(12692249-12692360)
chr5 (1-112)||(24054415-24054526)
chr5 (1-98)||(28525369-28525465)
chr5 (1-99)||(30384358-30384457)
chr5 (1-98)||(7389531-7389627)
chr5 (1-98)||(32094142-32094239)
chr5 (1-98)||(12686162-12686258)
chr5 (1-98)||(16215157-16215253)
chr5 (12-112)||(19066076-19066175)
chr5 (1-75)||(14610229-14610303)
chr5 (1-101)||(30772363-30772463)
chr5 (1-98)||(41297357-41297453)
chr5 (1-76)||(26509930-26510002)
chr5 (6-76)||(26316796-26316866)
chr5 (4-99)||(19059746-19059840)
chr5 (37-92)||(8706454-8706508)
[»] chr3 (24 HSPs)
chr3 (1-112)||(10244303-10244413)
chr3 (1-112)||(49151692-49151802)
chr3 (1-115)||(10766837-10766950)
chr3 (1-112)||(11846032-11846142)
chr3 (1-99)||(28964948-28965043)
chr3 (1-98)||(10238195-10238291)
chr3 (1-98)||(17055775-17055872)
chr3 (1-98)||(30051085-30051181)
chr3 (1-98)||(49157759-49157855)
chr3 (1-112)||(42197131-42197241)
chr3 (1-95)||(55003398-55003491)
chr3 (1-98)||(10760633-10760729)
chr3 (1-98)||(11839708-11839804)
chr3 (1-98)||(48128030-48128126)
chr3 (1-112)||(17593250-17593361)
chr3 (1-112)||(38455521-38455629)
chr3 (1-92)||(53069043-53069133)
chr3 (1-98)||(8331867-8331963)
chr3 (1-99)||(42191202-42191299)
chr3 (1-69)||(38449074-38449142)
chr3 (1-100)||(24643532-24643631)
chr3 (12-98)||(13445142-13445227)
chr3 (12-76)||(46656775-46656839)
chr3 (1-31)||(34300577-34300607)
[»] chr4 (19 HSPs)
chr4 (1-112)||(24288067-24288175)
chr4 (6-112)||(26963310-26963415)
chr4 (3-99)||(4632869-4632964)
chr4 (1-112)||(10739308-10739418)
chr4 (1-112)||(10953077-10953187)
chr4 (1-98)||(50168673-50168769)
chr4 (6-98)||(26956812-26956903)
chr4 (1-115)||(48161039-48161149)
chr4 (1-98)||(33458249-33458346)
chr4 (1-73)||(10733253-10733325)
chr4 (1-73)||(10947022-10947094)
chr4 (1-99)||(6257187-6257284)
chr4 (1-111)||(49976667-49976776)
chr4 (7-93)||(34308060-34308144)
chr4 (1-98)||(48167258-48167351)
chr4 (8-67)||(19686341-19686400)
chr4 (1-112)||(33461367-33461472)
chr4 (19-112)||(50156043-50156135)
chr4 (1-93)||(55473133-55473221)
[»] chr6 (15 HSPs)
chr6 (1-112)||(8662750-8662860)
chr6 (6-112)||(21196990-21197095)
chr6 (1-98)||(32035269-32035365)
chr6 (1-98)||(21190849-21190945)
chr6 (1-99)||(8650785-8650882)
chr6 (1-98)||(31756196-31756294)
chr6 (1-98)||(4580304-4580400)
chr6 (1-101)||(21782733-21782832)
chr6 (1-99)||(18778663-18778761)
chr6 (1-112)||(25343704-25343819)
chr6 (1-98)||(25354291-25354388)
chr6 (4-112)||(6098060-6098172)
chr6 (1-76)||(17581706-17581781)
chr6 (6-92)||(21770546-21770632)
chr6 (6-97)||(6102708-6102803)
[»] chr2 (16 HSPs)
chr2 (1-112)||(31002457-31002568)
chr2 (1-112)||(35090619-35090728)
chr2 (1-98)||(36750495-36750591)
chr2 (1-98)||(28682928-28683024)
chr2 (1-112)||(13456180-13456290)
chr2 (1-103)||(31008435-31008537)
chr2 (1-98)||(30965408-30965505)
chr2 (1-92)||(35084665-35084755)
chr2 (1-98)||(11048536-11048632)
chr2 (1-98)||(35438693-35438788)
chr2 (1-98)||(13462121-13462217)
chr2 (1-93)||(13149674-13149765)
chr2 (4-69)||(23343644-23343709)
chr2 (1-99)||(44716786-44716884)
chr2 (1-112)||(29833288-29833398)
chr2 (9-65)||(1388035-1388090)
[»] chr1 (13 HSPs)
chr1 (1-112)||(25387473-25387583)
chr1 (1-98)||(50306269-50306365)
chr1 (1-99)||(1078304-1078401)
chr1 (1-94)||(34740066-34740158)
chr1 (4-112)||(24963671-24963778)
chr1 (6-98)||(44410095-44410186)
chr1 (3-112)||(38151945-38152052)
chr1 (1-98)||(25381518-25381614)
chr1 (1-98)||(27955241-27955336)
chr1 (1-99)||(31058124-31058221)
chr1 (6-99)||(24926737-24926828)
chr1 (1-112)||(31051624-31051739)
chr1 (1-98)||(12183562-12183663)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-112)||(172859-172969)
[»] scaffold0236 (1 HSPs)
scaffold0236 (1-99)||(5615-5712)
[»] scaffold0363 (1 HSPs)
scaffold0363 (1-98)||(605-698)
[»] scaffold0085 (1 HSPs)
scaffold0085 (6-81)||(38513-38588)
[»] scaffold1114 (1 HSPs)
scaffold1114 (34-98)||(1198-1261)
[»] scaffold0185 (1 HSPs)
scaffold0185 (4-59)||(6006-6061)


Alignment Details
Target: scaffold0208 (Bit Score: 94; Significance: 6e-46; HSPs: 3)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 6776 - 6873
Alignment:
Q  126 atttagtttctccgattcaaacccttttcttatcatgttttttatttgtgggtttatcttttgtttgattcggtgccgacatgccgtaaccatttatt 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6776 atttagtttctccgattcaaacccttttcttatcatgttttttatttgcgggtttatcttttgtttgattcggtgccgacatgccgtaaccatttatt 6873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 6603 - 6714
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcat-aattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    |||||||||||||||||||||||||||||||  ||||||||| |||| ||||||||| |||||||||| ||||| | |||||||  ||||||||||||||    
T  6603 taatcatgttcaatgttttgtttgcttccgctattgattcataaattgttgaacatggtttatgaaat-tgtttat-attaagagctaaatttccaacaa 6700  T
Q  100 gtggtatcagagcc 113  Q
    ||||||||||||||    
T  6701 gtggtatcagagcc 6714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 12476 - 12573
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcat-aattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    |||| |||||||||||||| |||||||||||  ||||||||| |||| ||||| ||| |||||||||| ||||| | |||||||  ||||||||||||||    
T  12476 taattatgttcaatgttttatttgcttccgctattgattcataaattgttgaatatggtttatgaaat-tgtttat-attaagagctaaatttccaacaa 12573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 6e-46; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 42993083 - 42992954
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  42993083 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttttaattaagacctaaatttccatcaag 42992984  T
Q  101 tggtatcagagccacgacatgtttaattta 130  Q
    |||||||||||||||  ||||||| |||||    
T  42992983 tggtatcagagccacttcatgtttgattta 42992954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 32890969 - 32891079
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||| | |||||||| |||||||||||||||    
T  32890969 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaacaag 32891067  T
Q  101 tggtatcagagc 112  Q
    ||||||||||||    
T  32891068 tggtatcagagc 32891079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 1882828 - 1882725
Alignment:
Q  4 tcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaagtgg 103  Q
    ||||||||||||||||||||||||||||  ||||||| ||||| ||||||||||| |||||||||||||||  |||||||| ||||||||||||||||||    
T  1882828 tcatgttcaatgttttgtttgcttccgctattgattcttaattgttgaacatgttctatgaaatctgttttatattaagacctaaatttccaacaagtgg 1882729  T
Q  104 tatc 107  Q
    ||||    
T  1882728 tatc 1882725  T

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Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 9935359 - 9935455
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    ||||||| |||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  9935359 taatcatattcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgttttt-attaagacctaaatttccaaca 9935455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 32897093 - 32897189
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||| | |||||||| |||||||||||||    
T  32897093 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaaca 32897189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 39727399 - 39727299
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgttttta--attaagacataaatttccaaca 98  Q
    ||||||||||||||||||||||||||||||   ||||||||||||| |||||||||||||||||||||| ||||||  |||||||| |||||||||||||    
T  39727399 taatcatgttcaatgttttgtttgcttccgttattgattcataattgttgaacatgttttatgaaatctatttttattattaagacctaaatttccaaca 39727300  T
Q  99 a 99  Q
    |    
T  39727299 a 39727299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 7771312 - 7771409
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    |||||||||||||||||||||||||||||||  |||||| |||||| |||||||||| ||||||||||||||| | |||||||| ||||||||||||||    
T  7771312 taatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaacaa 7771409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 14799495 - 14799399
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| ||||||||| ||||| | |||||||| |||||||||||||    
T  14799495 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatttgtttat-attaagacctaaatttccaaca 14799399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 14418021 - 14418114
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  |||||||||| |||   ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  14418021 taatcatgttcaatgttttgtttgcttccgctattgattcatagtta---aacatgttttatgaaatctgttttt-attaagacctaaatttccaaca 14418114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 39735631 - 39735517
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgttttta--att-aagacataaatttccaac 97  Q
    |||||||||||||| |||| ||| |||||||  ||||||||||||| |||||||||||||||||||||| ||||||  ||| || || ||||||||||||    
T  39735631 taatcatgttcaatattttatttacttccgctattgattcataattgttgaacatgttttatgaaatctatttttattattaaaaacctaaatttccaac 39735532  T
Q  98 aagtggtatcagagc 112  Q
    |||||||||||||||    
T  39735531 aagtggtatcagagc 39735517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 10705923 - 10706021
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    ||||||||||||||||||||||||||| |||  |||||| |  ||| || ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  10705923 taatcatgttcaatgttttgtttgcttacgctattgatttacgattgttaaacatgtattatgaaatctgtttttaattaagacctaaatttccaacaa 10706021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 5542239 - 5542143
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| |||| |||||| ||| | ||||| || |||||||||||||    
T  5542239 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattataaaatctatttat-attaaaacctaaatttccaaca 5542143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 36819051 - 36819147
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    ||||||| ||||||||||||||||||||| |  ||||||||||||| |||||||||| |||||| || ||||| | |||||||| |||||||||||||    
T  36819051 taatcatattcaatgttttgtttgcttccactattgattcataattgttgaacatgtattatgagatttgtttat-attaagacctaaatttccaaca 36819147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 10700139 - 10700197
Alignment:
Q  51 aacatgttttatgaaatctgtttttaattaagacataaatttccaacaagtggtatcag 109  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  10700139 aacatgtattatgaaatatgtttttaattaagacctaaatttccaacaagtggtatcag 10700197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 24250183 - 24250279
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    |||| ||||||||| ||||||||| ||||||  |||||||||| || || ||||||||||||||||| |||||||  ||||||| ||||||| ||||||    
T  24250183 taataatgttcaatattttgtttgtttccgctattgattcatatttgttcaacatgttttatgaaatatgttttt--ttaagacctaaattttcaacaa 24250279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 31379501 - 31379430
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtt 72  Q
    ||||||||||||||||||| ||||| |||| | |||||||||||||||| ||||||| ||||||||| ||||    
T  31379501 taatcatgttcaatgttttatttgcctccgtcattgattcataattattaaacatgtgttatgaaatttgtt 31379430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 1171414 - 1171493
Alignment:
Q  12 aatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttc 93  Q
    ||||||||||||||||||||  |||| |||||||| ||||| |||||| ||||||||||||||  |||||||| ||||||||    
T  1171414 aatgttttgtttgcttccgcggttgaatcataattgttgaatatgtttcatgaaatctgtttt--attaagacctaaatttc 1171493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 22219796 - 22219706
Alignment:
Q  1 taatcatgttcaatgttttgtttg-cttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatt 91  Q
    ||||||||||||| ||||| |||  |||| ||  ||||||||||| |||||||||||||||||||||||| ||||| |||||||| ||||||    
T  22219796 taatcatgttcaaagttttctttttcttctgctattgattcataactattgaacatgttttatgaaatctcttttt-attaagacctaaatt 22219706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31399116 - 31399047
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctg 70  Q
    |||||||||||||||| |||||||| ||| |  |||||||||||||||||||||| | |||| |||||||    
T  31399116 taatcatgttcaatgtattgtttgcctccactattgattcataattattgaacatatgttattaaatctg 31399047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 39689782 - 39689817
Alignment:
Q  41 ataattattgaacatgttttatgaaatctgttttta 76  Q
    |||||| |||||||||||||||||||||||||||||    
T  39689782 ataattgttgaacatgttttatgaaatctgttttta 39689817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 1273 - 1176
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1273 taatcatgttcaatgttttgtttgcttccgcctttgattcataattgttgaacatgttttatgaaatctgtttttaattaagacctaaatttccaaca 1176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 3817390 - 3817280
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||| | |||||||| |||||||||||||||    
T  3817390 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaacaag 3817292  T
Q  101 tggtatcagagc 112  Q
    ||||||||||||    
T  3817291 tggtatcagagc 3817280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 339451 - 339564
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| ||| | |||||||  |||||||||||||||    
T  339451 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctctttat-attaagagctaaatttccaacaag 339549  T
Q  101 tggtatcagagccac 115  Q
    |||||||||||||||    
T  339550 tggtatcagagccac 339564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 42767374 - 42767276
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  42767374 taatcatgttcaatattttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttttaattaagacctaaatttccaacaa 42767276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 351866 - 351963
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| | |||||||  ||||||||||||||    
T  351866 taatcatgttcaatgttttgtttgcttccgctgttgattcataattgttgaacatgttttatgaaatctgtttat-attaagagctaaatttccaacaa 351963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 12804083 - 12804177
Alignment:
Q  4 tcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    ||||||||||||||||| ||||||||||  ||||||||||||  |||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  12804083 tcatgttcaatgttttgcttgcttccgctattgattcataatcgttgaacatgttttatgaaatctgttttt-attaagacctaaatttccaacaa 12804177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 35148083 - 35147986
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacat-aaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  | |||| |||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  35148083 taatcatgttcaatgttttgtttgcttccgctatcgatttataattgttgaacatgttttatgaaatctgttttt-attaagacataaaatttccaaca 35147986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 3811248 - 3811152
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||| | |||||||| || ||||||||||    
T  3811248 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttat-attaagacctacatttccaaca 3811152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 28421038 - 28420942
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  |||||| |||||| |||||||||||||||||||||||||| | || ||||  |||||||||||||    
T  28421038 taatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgttttatgaaatctgtttat-atcaagagctaaatttccaaca 28420942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 20239031 - 20239128
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    |||||||||||||||||||||||||||||||  |||||  || ||| |||||||||||||||||||| ||||| | |||||||| ||||||||||||||    
T  20239031 taatcatgttcaatgttttgtttgcttccgctattgatgtatgattgttgaacatgttttatgaaatttgtttat-attaagacctaaatttccaacaa 20239128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 43540065 - 43540140
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgttttta 76  Q
    |||||||||||||| |||| |||  ||||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  43540065 taatcatgttcaatattttatttaattccgctattgattcataattattgaacatgttctatgaaatctgttttta 43540140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 5979253 - 5979156
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    ||||||||||||||  ||||||||||| |||  |||||| |  ||| || ||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  5979253 taatcatgttcaatagtttgtttgctttcgctattgatttacgattgttcaacatgtattatgaaatctgtttttaattaagacctaaattttcaaca 5979156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 5849610 - 5849702
Alignment:
Q  6 atgttcaatgttttgtttgcttccgcctttgattcataattattgaacat-gttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    ||||||||||||||| ||||||||||  |||||||||||| |||||||||  |||||| |||| ||||||| |||||||| ||||||| |||||    
T  5849610 atgttcaatgttttggttgcttccgctattgattcataatcattgaacataattttataaaatttgttttt-attaagacctaaatttgcaaca 5849702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 26381151 - 26381258
Alignment:
Q  3 atcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaagtg 102  Q
    |||||||||||| || |||||| || | || ||||||||||||| |||||||||| ||||||||||| ||||  ||| |||| |||||||| ||  ||||    
T  26381151 atcatgttcaatattgtgtttgttttcccccttgattcataattgttgaacatgtcttatgaaatctatttt--atttagacctaaatttctaatgagtg 26381248  T
Q  103 gtatcagagc 112  Q
     |||||||||    
T  26381249 atatcagagc 26381258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 26383708 - 26383806
Alignment:
Q  3 atcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtt---tttaattaagacataaatttccaaca 98  Q
    |||||||||||| ||||||||| ||| |   ||||||||||||| |||||||||| ||||||||||| ||   ||| ||| |||| |||||||||||||    
T  26383708 atcatgttcaatattttgtttgtttctgttgttgattcataattgttgaacatgtcttatgaaatctattctgttttatttagacttaaatttccaaca 26383806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 22742004 - 22741900
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttg-------attcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttc 93  Q
    |||||||||||||||||  ||||||||||||  |||       |||||||||| ||||||||||||||||||| ||||| || ||| |||| ||||||||    
T  22742004 taatcatgttcaatgttcagtttgcttccgctattgttgattcattcataattgttgaacatgttttatgaaacctgttctt-attgagacctaaatttc 22741906  T
Q  94 caacaa 99  Q
    ||||||    
T  22741905 caacaa 22741900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 30219322 - 30219269
Alignment:
Q  4 tcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgt 57  Q
    |||||||||| |||||||||| ||||||   |||||||||||||||||||||||    
T  30219322 tcatgttcaacgttttgtttgattccgctaatgattcataattattgaacatgt 30219269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 28531561 - 28531451
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||| | |||||||| |||||||||||||||    
T  28531561 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaacaag 28531463  T
Q  101 tggtatcagagc 112  Q
    ||||||||||||    
T  28531462 tggtatcagagc 28531451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 32097040 - 32096929
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||||||  |||||| |  ||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||     
T  32097040 taatcatgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttttaattaagacctaaatttccaacaaa 32096941  T
Q  101 tggtatcagagc 112  Q
    ||||||||||||    
T  32096940 tggtatcagagc 32096929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 12692360 - 12692249
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||||||  |||||| |||||| |||||||||||||||||||||||||| | || ||||  |||||||||||||||    
T  12692360 taatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgttttatgaaatctgtttat-atcaagagctaaatttccaacaag 12692262  T
Q  101 tggtatcagagcc 113  Q
    |||||||||||||    
T  12692261 tggtatcagagcc 12692249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 24054415 - 24054526
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacat-aaatttccaacaa 99  Q
    |||||||||||||||||||||||||||||||  | |||| |||||| |||||||||||||||||||||||||||| |||||||| | |||||| ||||||    
T  24054415 taatcatgttcaatgttttgtttgcttccgctatagatttataattgttgaacatgttttatgaaatctgttttt-attaagacctaaaattttcaacaa 24054513  T
Q  100 gtggtatcagagc 112  Q
    |||||||||||||    
T  24054514 gtggtatcagagc 24054526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 28525465 - 28525369
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||| | |||||||| |||||||||||||    
T  28525465 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaaca 28525369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 30384457 - 30384358
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgt-ttttaattaagacataaatttccaacaa 99  Q
    ||||| |||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||| |||| ||||| || ||||||||||||||    
T  30384457 taatcgtgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttttttattaaaacctaaatttccaacaa 30384358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 7389627 - 7389531
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| ||||||||| ||||| | |||||||| |||||||||||||    
T  7389627 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatttgtttat-attaagacctaaatttccaaca 7389531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 32094239 - 32094142
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  |||||| |  ||| |||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  32094239 taatcatgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattataaaatctgtttttaattaagacctaaatttccaaca 32094142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 12686258 - 12686162
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  |||||| |||||| |||||||||||||||||||||||||| | || ||||  |||||||||||||    
T  12686258 taatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgttttatgaaatctgtttat-atcaagagctaaatttccaaca 12686162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 16215253 - 16215157
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||| ||||| |||| ||||||||||||||||| || ||||| |||||||| ||||    
T  16215253 taatcatgttaaatgttttgtttgcttccgctattgattcataattgttgaatatgtgttatgaaatctgttttt-ataaagacctaaatttctaaca 16215157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 19066175 - 19066076
Alignment:
Q  12 aatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaagtggtatcagag 111  Q
    ||||||||||||||||||||   ||||| |||||  ||||||||| |||||||||| ||||||| |||||||| |||||||||||| |||||||||||||    
T  19066175 aatgttttgtttgcttccgctaatgatttataatcgttgaacatggtttatgaaatatgttttt-attaagacttaaatttccaactagtggtatcagag 19066077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 14610229 - 14610303
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgttttt 75  Q
    ||||||||||||||| ||| |||||||||||  || |||||||||| ||||||||||||||||||||||||||||    
T  14610229 taatcatgttcaatggtttatttgcttccgctattaattcataattgttgaacatgttttatgaaatctgttttt 14610303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 30772363 - 30772463
Alignment:
Q  1 taatcatgttcaatgtttt-gtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    |||||||||||| |||||| |||||||||| |  || ||||||||||||||||||||||||||||||| | ||||| |||||||  ||||||||||||||    
T  30772363 taatcatgttcattgtttttgtttgcttccactgtttattcataattattgaacatgttttatgaaatttattttt-attaagaactaaatttccaacaa 30772461  T
Q  100 gt 101  Q
    ||    
T  30772462 gt 30772463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 41297357 - 41297453
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||| ||||||||||||||||||||||| ||  ||||||||||||| |||||||||| ||||||||||| ||| | ||||||||  ||||||||||||    
T  41297357 taattatgttcaatgttttgtttgcttctgctattgattcataattgttgaacatgtattatgaaatctctttat-attaagacccaaatttccaaca 41297453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 26509930 - 26510002
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgttttta 76  Q
    |||| |||||||||||||||||||||||| |  ||   ||||||| ||||||||||||||||||||||||||||||    
T  26509930 taattatgttcaatgttttgtttgcttccactatt---tcataatgattgaacatgttttatgaaatctgttttta 26510002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 26316866 - 26316796
Alignment:
Q  6 atgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgttttta 76  Q
    |||||||||||||| ||||||||| |  || ||| | ||||||||||||||||||||||||| ||||||||    
T  26316866 atgttcaatgttttttttgcttccactattaatttaaaattattgaacatgttttatgaaatatgttttta 26316796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 19059840 - 19059746
Alignment:
Q  4 tcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    ||||||| ||| |||||||||||||| |   ||||| |||||  ||||| | |||||||||||| ||||||| |||||||| ||||||||||||||    
T  19059840 tcatgtttaatattttgtttgcttcccctaatgatttataatcgttgaatacgttttatgaaatatgttttt-attaagacctaaatttccaacaa 19059746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 8706508 - 8706454
Alignment:
Q  37 attcataattattgaacatgttttatgaaatctgtttttaattaagacataaattt 92  Q
    |||||||||| |||||||| ||||||||||||| ||||| |||||||| |||||||    
T  8706508 attcataattgttgaacatattttatgaaatctattttt-attaagacctaaattt 8706454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 10244413 - 10244303
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| | |||||||  |||||||||||||||    
T  10244413 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-attaagagctaaatttccaacaag 10244315  T
Q  101 tggtatcagagc 112  Q
    ||||||||||||    
T  10244314 tggtatcagagc 10244303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 49151692 - 49151802
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||| | |||||||| |||||||||||||||    
T  49151692 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaacaag 49151790  T
Q  101 tggtatcagagc 112  Q
    ||||||||||||    
T  49151791 tggtatcagagc 49151802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 10766950 - 10766837
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||||||  |||||| |||||| |||||||||| ||||||||| ||||||||| |||||| |||||||||||||||    
T  10766950 taatcatgttcaatgttttgtttgcttccgctgttgatttataattgttgaacatgtattatgaaatttgtttttaa-taagacctaaatttccaacaag 10766852  T
Q  101 tggtatcagagccac 115  Q
    |||||||||||||||    
T  10766851 tggtatcagagccac 10766837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 11846142 - 11846032
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||||||  |||||| |||||| |||||||||| |||| ||||||| ||||||||||||| |||||||||||||||    
T  11846142 taatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattataaaatctg-ttttaattaagacctaaatttccaacaag 11846044  T
Q  101 tggtatcagagc 112  Q
    ||||||||||||    
T  11846043 tggtatcagagc 11846032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28964948 - 28965043
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    |||||||||||||||||||||||||||||||  |||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28964948 taatcatgttcaatgttttgtttgcttccgctattgattcat---tgttgaacatgttttatgaaatctgtttttaattaagacctaaatttccaacaa 28965043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 10238291 - 10238195
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| | |||||||  |||||||||||||    
T  10238291 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-attaagagctaaatttccaaca 10238195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 17055872 - 17055775
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||| |||||||||| |||||||| |||||||| |||||||| ||||    
T  17055872 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatattttatgaaaactgttttttattaagacctaaatttcgaaca 17055775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 30051181 - 30051085
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  30051181 taatcatgttcaatattttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgttttt-attaagacctaaattttcaaca 30051085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 49157759 - 49157855
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||| | |||||||| |||||||||||||    
T  49157759 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaaca 49157855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 42197241 - 42197131
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||| ||||||||||||||||||||||||  |||||||| |||| |||||||||| ||||||||||| ||| | |||||||| || ||||||||||||    
T  42197241 taatcaggttcaatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaatctatttat-attaagacctatatttccaacaag 42197143  T
Q  101 tggtatcagagc 112  Q
    ||||||||||||    
T  42197142 tggtatcagagc 42197131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 55003491 - 55003398
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttcca 95  Q
    ||||||||||||||||||| |||||||| ||  ||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||    
T  55003491 taatcatgttcaatgttttatttgcttctgctattgattcataattgttgaacatgttttatgaaatctgttttt-attaagacctaaatttcca 55003398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 10760729 - 10760633
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    ||||||||||||||||||| |||||||||||  |||||| |||||| |||||||||| ||||||||||||||||||| |||||| |||||||||||||    
T  10760729 taatcatgttcaatgttttatttgcttccgctattgatttataattgttgaacatgtattatgaaatctgtttttaa-taagacctaaatttccaaca 10760633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 11839804 - 11839708
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| | ||||||||||||| | |||||||| |||||||||||||    
T  11839804 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtatcatgaaatctgtttat-attaagacctaaatttccaaca 11839708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 48128126 - 48128030
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||| ||||||||||||||| ||| |||| |||||||||||||    
T  48128126 taatcatgttcaatgttttgtttgtttccgctattgattcataattgttgaacatgtttcatgaaatctgttttt-attgagacctaaatttccaaca 48128030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 17593361 - 17593250
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||||||  |||||| |  ||| |||||||| | ||||||||| | |||||||||||||| ||||||||| |||||    
T  17593361 taatcatgttcaatgttttgtttgcttccgcgattgatttacgattgttgaacatctattatgaaatatatttttaattaagacctaaatttcctacaag 17593262  T
Q  101 tggtatcagagc 112  Q
    || |||||||||    
T  17593261 tgttatcagagc 17593250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 38455629 - 38455521
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||||||  |||||| |||||| |||||||||| ||||||||||   |||  ||||||||  |||||||||||||     
T  38455629 taatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaatc---tttatattaagaccgaaatttccaacaaa 38455533  T
Q  101 tggtatcagagc 112  Q
    ||||||||||||    
T  38455532 tggtatcagagc 38455521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 53069133 - 53069043
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaattt 92  Q
    |||||||||||||||||||||||||||||||  | |||| |||||| ||||||||||||||| |||||||||||| |||||||| |||||||    
T  53069133 taatcatgttcaatgttttgtttgcttccgctatcgatttataattgttgaacatgttttataaaatctgttttt-attaagacctaaattt 53069043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 8331867 - 8331963
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  |||||| |||||| ||||||||||||||| |||||| ||| | |||||||  |||||||||||||    
T  8331867 taatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgttttataaaatctatttat-attaagagctaaatttccaaca 8331963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 42191299 - 42191202
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    |||||| ||||||||||||||||||||||||  |||||||| |||| |||||||||| ||||||||||| ||| | |||||||| || |||||||||||    
T  42191299 taatcaggttcaatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaatctatttat-attaagacctatatttccaacaa 42191202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 38449142 - 38449074
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatct 69  Q
    |||||||||||||||||||||||||||||||  |||||| |||||| |||||||||| |||||||||||    
T  38449142 taatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaatct 38449074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 24643631 - 24643532
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttt--tatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    ||||||||||||||||||| ||| |||||||  ||||||||||| | ||||||||||||  |||||| | ||||||  |||||||| |||||||||||||    
T  24643631 taatcatgttcaatgttttatttacttccgctattgattcataaatgttgaacatgttttatatgaagtttgtttt--attaagacctaaatttccaaca 24643534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 13445142 - 13445227
Alignment:
Q  12 aatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||| |||||||||||  |||||| |||||| ||||||||||| ||| |||||| ||||| ||| |||| |||||||| ||||    
T  13445142 aatgttttatttgcttccgctattgatttataattgttgaacatgttctatcaaatctattttt-atttagacctaaatttctaaca 13445227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 46656775 - 46656839
Alignment:
Q  12 aatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgttttta 76  Q
    |||||||| ||| |||| ||  || ||||||| ||||||||||||||||||||||| ||||||||    
T  46656775 aatgttttatttacttcagctattaattcatatttattgaacatgttttatgaaatatgttttta 46656839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 34300577 - 34300607
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgc 31  Q
    |||||||||||||||||||||||||||||||    
T  34300577 taatcatgttcaatgttttgtttgcttccgc 34300607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 24288067 - 24288175
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| |||   |||||||| |||||||||||||||    
T  24288067 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctattt---attaagacctaaatttccaacaag 24288163  T
Q  101 tggtatcagagc 112  Q
    ||||||||||||    
T  24288164 tggtatcagagc 24288175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 112
Target Start/End: Complemental strand, 26963415 - 26963310
Alignment:
Q  6 atgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaagtggta 105  Q
    ||||||||||||||||||||||||||  ||||||||||||  |||||||||||||||||||| ||||||| |||||||| |||||||||||||||| |||    
T  26963415 atgttcaatgttttgtttgcttccgctattgattcataatcgttgaacatgttttatgaaatttgttttt-attaagacctaaatttccaacaagtagta 26963317  T
Q  106 tcagagc 112  Q
    |||||||    
T  26963316 tcagagc 26963310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 4632869 - 4632964
Alignment:
Q  3 atcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    |||||||||||||||||||||||||||||  |||||| |||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  4632869 atcatgttcaatgttttgtttgcttccgctgttgattaataattgttgaacatgttttatgaaatctgttttt-attaagacctaaatttccaacaa 4632964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 10739418 - 10739308
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||| |||||||||||||||||||||||||| |  ||||||  ||||| |||||||||    
T  10739418 taatcatgttcaatgttttgtttgcttctgctattgattcataattgttgaacatgttttatgaaatctgtttat-gttaagagctaaatgtccaacaag 10739320  T
Q  101 tggtatcagagc 112  Q
    ||||||||||||    
T  10739319 tggtatcagagc 10739308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 10953187 - 10953077
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||| |||||||||||||||||||||||||| |  ||||||  ||||| |||||||||    
T  10953187 taatcatgttcaatgttttgtttgcttctgctattgattcataattgttgaacatgttttatgaaatctgtttat-gttaagagctaaatgtccaacaag 10953089  T
Q  101 tggtatcagagc 112  Q
    ||||||||||||    
T  10953088 tggtatcagagc 10953077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 50168673 - 50168769
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||| ||||||||| |||||| |||| |||||||| |||||||||||||    
T  50168673 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacgtgttttatgtaatctggtttt-attaagacctaaatttccaaca 50168769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 26956903 - 26956812
Alignment:
Q  6 atgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||| |||||||||||  ||||||||||||  |||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  26956903 atgttcaatgttttatttgcttccgctattgattcataatcgttgaacatgttttatgaaatctgttttt-attaagacctaaatttccaaca 26956812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 48161039 - 48161149
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||| ||||||||||||||||||||||||||  |||||||||| ||   |||||| ||||||||||||| |||||| ||||||| |||||||| ||||||    
T  48161039 taattatgttcaatgttttgtttgcttccgctattgattcatagtt---gaacatattttatgaaatctattttta-ttaagacctaaatttctaacaag 48161134  T
Q  101 tggtatcagagccac 115  Q
    |||||||||||||||    
T  48161135 tggtatcagagccac 48161149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 33458346 - 33458249
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||| ||||||||||||||||  |||||| |  ||| |||||||| | |||||||||||||||||||||||||| |||||||||||||    
T  33458346 taatcatgttcaatattttgtttgcttccgctattgatttacgattgttgaacatatattatgaaatctgtttttaattaagacctaaatttccaaca 33458249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 10733325 - 10733253
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgttt 73  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  10733325 taatcatgttcaatgttttatttgcttccgctattgattcataattgttgaacatgttttatgaaatctgttt 10733253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 10947094 - 10947022
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgttt 73  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  10947094 taatcatgttcaatgttttatttgcttccgctattgattcataattgttgaacatgttttatgaaatctgttt 10947022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6257284 - 6257187
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    |||||||||||||||||||||||||||||||  |||||| || ||| |||||||||| ||||||||||| ||| | |||||||| ||||||||||||||    
T  6257284 taatcatgttcaatgttttgtttgcttccgctgttgatttatgattgttgaacatgtattatgaaatctatttat-attaagacctaaatttccaacaa 6257187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 49976667 - 49976776
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    ||||||| ||||||||||||||||||| |||  | ||||||||||| ||||| |||||||||||||| ||||||| ||||| |  |||||||| ||||||    
T  49976667 taatcatattcaatgttttgtttgctttcgctatcgattcataattgttgaatatgttttatgaaatttgttttt-attaaaatctaaatttctaacaag 49976765  T
Q  101 tggtatcagag 111  Q
    |||||||||||    
T  49976766 tggtatcagag 49976776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 34308144 - 34308060
Alignment:
Q  7 tgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttc 93  Q
    |||||||| |||||| |||||||||  ||||||||||||||||||||||||||||| |||||||||||  |||||||| ||||||||    
T  34308144 tgttcaatattttgtatgcttccgctattgattcataattattgaacatgttttataaaatctgtttt--attaagacgtaaatttc 34308060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 48167258 - 48167351
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||| ||||||||||||||||||||||||||  ||||||||||    |||||||| ||||||||||||| ||||| |||||||| |||||||| ||||    
T  48167258 taattatgttcaatgttttgtttgcttccgctattgattcata---gttgaacatattttatgaaatctattttt-attaagacctaaatttctaaca 48167351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 19686400 - 19686341
Alignment:
Q  8 gttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaat 67  Q
    ||||||| |||||||||||||||   |||||| ||| |||||||||||||||||||||||    
T  19686400 gttcaatattttgtttgcttccgttattgatttatagttattgaacatgttttatgaaat 19686341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 33461472 - 33461367
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    ||||||||||||||||||||||||||||| |  |||||| |  ||| |||||||     ||| |||| |||||||||||||||  |||||||| |||||     
T  33461472 taatcatgttcaatgttttgtttgcttccactattgatttacgattgttgaaca-----tataaaatatgtttttaattaagatttaaatttctaacaa- 33461379  T
Q  101 tggtatcagagc 112  Q
    ||||||||||||    
T  33461378 tggtatcagagc 33461367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 50156043 - 50156135
Alignment:
Q  19 tgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaagtggtatcagagc 112  Q
    ||||| |||||||  ||||||||||||| |||||||||||||||  |||||| |||| ||||| |  |||||||  |||||||| |||||||||    
T  50156043 tgtttacttccgctattgattcataattgttgaacatgttttatataatctggtttt-attaacaattaaatttttaacaagtgatatcagagc 50156135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 55473221 - 55473133
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttc 93  Q
    ||||||| |||||| |||| |||||||||||  |||||| ||   |||||||||| ||||||||||| ||||| | |||||||| ||||||||    
T  55473221 taatcatattcaatattttatttgcttccgctattgatttat---tattgaacatattttatgaaatttgtttct-attaagacctaaatttc 55473133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 8662860 - 8662750
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| | |||||||  ||||||| |||||||    
T  8662860 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-attaagagctaaatttacaacaag 8662762  T
Q  101 tggtatcagagc 112  Q
    ||||||||||||    
T  8662761 tggtatcagagc 8662750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 112
Target Start/End: Complemental strand, 21197095 - 21196990
Alignment:
Q  6 atgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaagtggta 105  Q
    ||||||||||||||||||||||||||  ||||||||||||  |||||||||||||||||||||||||||| | || ||| ||||||||||||||||||||    
T  21197095 atgttcaatgttttgtttgcttccgctattgattcataatcgttgaacatgttttatgaaatctgttttt-actatgacctaaatttccaacaagtggta 21196997  T
Q  106 tcagagc 112  Q
    |||||||    
T  21196996 tcagagc 21196990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 32035365 - 32035269
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||||||||||    
T  32035365 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-attaagacctaaatttccaaca 32035269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 21190945 - 21190849
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||| ||||||||||||||||| ||| |||||| |||||||||||||    
T  21190945 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatattttatgaaatctgtttataa-taagacctaaatttccaaca 21190849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 8650882 - 8650785
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| | |||||||  ||||||| ||||||    
T  8650882 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-attaagagctaaatttacaacaa 8650785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 31756294 - 31756196
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgt-ttttaattaagacataaatttccaaca 98  Q
    ||||||||||||||||||| ||||||||||   ||||||||||||| |||||||||||||||||||||||| |||| |||||||| |||||||||||||    
T  31756294 taatcatgttcaatgttttatttgcttccgttgttgattcataattgttgaacatgttttatgaaatctgtttttttattaagacctaaatttccaaca 31756196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 4580400 - 4580304
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  |||||||||| || |||||||||| ||||||||||||||| | |||||||| |||||||||||||    
T  4580400 taatcatgttcaatgttttgtttgcttccgctattgattcatagttgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaaca 4580304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21782832 - 21782733
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||||||  |||||| |||||| |||||||||| ||||||||||||||| | |||||||| |||||||| ||||||    
T  21782832 taatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttctaacaag 21782734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18778663 - 18778761
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatg-ttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    |||| |||||||| |||||||||||||||||  ||||||||||||||||||||||| ||||||||||| || ||||||||||||| ||||||||||||||    
T  18778663 taattatgttcaacgttttgtttgcttccgctattgattcataattattgaacatgtttttatgaaatttg-ttttaattaagacctaaatttccaacaa 18778761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 25343704 - 25343819
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaa----catgttttatgaaatctgtttttaattaagacataaatttccaa 96  Q
    |||||||||||||||||||||||||||| ||  |||||| |  ||| |||||    ||||| ||||||||| ||||||||||||||| ||||||||||||    
T  25343704 taatcatgttcaatgttttgtttgcttctgctattgatttacgattgttgaacatgcatgtattatgaaatttgtttttaattaagatataaatttccaa 25343803  T
Q  97 caagtggtatcagagc 112  Q
    ||||||||||||||||    
T  25343804 caagtggtatcagagc 25343819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 25354291 - 25354388
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    ||||||||||||||| |||||||||||||||  |||||| |  ||| |||||||||| |||||||||||||||||||||||||  |||||||||||||    
T  25354291 taatcatgttcaatgctttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttttaattaagatctaaatttccaaca 25354388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 6098060 - 6098172
Alignment:
Q  4 tcatgttcaatgttttgtttgcttccgcc-tttgattcataattattg---aacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    |||||||||||||||||| | |||||||  |||||||||||||| |||   ||||||||||||||||| ||||||| |||||||| ||| ||| ||||||    
T  6098060 tcatgttcaatgttttgtctacttccgctatttgattcataattgttgttgaacatgttttatgaaatttgttttttattaagacctaagttttcaacaa 6098159  T
Q  100 gtggtatcagagc 112  Q
    ||||||| |||||    
T  6098160 gtggtatgagagc 6098172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 17581706 - 17581781
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgttttta 76  Q
    |||||||||||||||||||||||||||||||  | ||||||||||  |||||||||||||||||| | ||||||||    
T  17581706 taatcatgttcaatgttttgtttgcttccgctatcgattcataatagttgaacatgttttatgaattatgttttta 17581781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 21770632 - 21770546
Alignment:
Q  6 atgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaattt 92  Q
    |||||||||||||||||| ||||| |  || ||| |  ||| |||| ||||| |||||||||||||||||||||||||| |||||||    
T  21770632 atgttcaatgttttgtttacttcctctattaatttacgattgttgatcatgtattatgaaatctgtttttaattaagacctaaattt 21770546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 6102708 - 6102803
Alignment:
Q  6 atgttcaatgttttgtttgcttccgcc-tttgattcataattattg---aacatgttttatgaaatctgtttttaattaagacataaatttccaac 97  Q
    |||||||||||||||| |||||||||  |||||||||| ||| |||   ||||| ||||||||||| ||||||| || ||||| ||||||||||||    
T  6102708 atgttcaatgttttgtctgcttccgctatttgattcatgattgttgttgaacatattttatgaaatatgttttttatgaagacctaaatttccaac 6102803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 31002457 - 31002568
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||| ||||||||||||||||  |||||| |  ||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  31002457 taatcatgttcaatattttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttttaattaagacctaaatttccaacaag 31002556  T
Q  101 tggtatcagagc 112  Q
    ||||||||||||    
T  31002557 tggtatcagagc 31002568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 35090728 - 35090619
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| | |||||||| ||||||| |||||||    
T  35090728 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-attaagacctaaattt-caacaag 35090631  T
Q  101 tggtatcagagc 112  Q
    ||||||||||||    
T  35090630 tggtatcagagc 35090619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 36750495 - 36750591
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  36750495 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgttttt-attaagacttaaatttccaaca 36750591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 28683024 - 28682928
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||||||||||    
T  28683024 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-attaagacctaaatttccaaca 28682928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 13456180 - 13456290
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||| ||||||||||||||||||||||||  |||||||| |||| |||||||||| ||||||||||| ||| | |||||||| || ||||||||||||    
T  13456180 taatcaggttcaatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaatctatttat-attaagacctatatttccaacaag 13456278  T
Q  101 tggtatcagagc 112  Q
    ||||||||||||    
T  13456279 tggtatcagagc 13456290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 31008435 - 31008537
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||| ||||||||||||||||  |||||| |  ||| |||||||||| |||||||||||||||||||||||||| ||||||||||||| |    
T  31008435 taatcatgttcaatattttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttttaattaagacctaaatttccaacagg 31008534  T
Q  101 tgg 103  Q
    |||    
T  31008535 tgg 31008537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 30965408 - 30965505
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||| ||||||||||||||||  |||||| || ||| |||||||||| |||||||||||||||||||||||||| |||||||| ||||    
T  30965408 taatcatgttcaatattttgtttgcttccgctattgatttatgattgttgaacatgtattatgaaatctgtttttaattaagacctaaatttctaaca 30965505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 35084755 - 35084665
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaattt 92  Q
    ||||||| |||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||||    
T  35084755 taatcattttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-attaagacctaaattt 35084665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 11048632 - 11048536
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||| ||| |||||||||||||||| | ||||||| |||||| |||||||||||||    
T  11048632 taatcatgttcaatgttttgtttgcttcagctattgattcataattgttggacatgttttatgaaatttatttttaa-taagacctaaatttccaaca 11048536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 35438788 - 35438693
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    ||||||||||||||||||| |||||||||||  ||||||||||| | |||||||||||||||||||| ||||||  |||||| | |||||||||||||    
T  35438788 taatcatgttcaatgttttatttgcttccgctattgattcataactgttgaacatgttttatgaaatttgtttt--attaaggcctaaatttccaaca 35438693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 13462121 - 13462217
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||| ||||||||||||||||||||||||  |||||||| |||| |||||||||| ||||||||||| ||| | |||||||| || ||||||||||    
T  13462121 taatcaggttcaatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaatctatttat-attaagacctatatttccaaca 13462217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 13149765 - 13149674
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttc 93  Q
    |||||||||||||||||||||||||||||||  |||||| |  ||| |||||||||| ||||||||||||||| | |||||||| ||||||||    
T  13149765 taatcatgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttc 13149674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 23343644 - 23343709
Alignment:
Q  4 tcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatct 69  Q
    ||||||||||||||||||||||||||||  ||||||| ||||  ||||||||||||||||||||||    
T  23343644 tcatgttcaatgttttgtttgcttccgctgttgattcgtaatcgttgaacatgttttatgaaatct 23343709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 44716884 - 44716786
Alignment:
Q  1 taatcatgttcaatgttttgttt-gcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    ||||||||||||||||||| ||| ||||||||  |||||| ||||   ||||||||||||||||| |||||||||| |||||||| |||||||| |||||    
T  44716884 taatcatgttcaatgttttcttttgcttccgctattgattgataaccgttgaacatgttttatgatatctgttttt-attaagacctaaatttctaacaa 44716786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 29833288 - 29833398
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||| ||||||||| |||| |||| |||||   |||||||| ||||||| ||||||| ||||||||||| ||| | ||| | || |||||||| ||||||    
T  29833288 taattatgttcaatattttatttgtttccgttattgattcacaattattaaacatgtattatgaaatctctttat-atttatacctaaatttctaacaag 29833386  T
Q  101 tggtatcagagc 112  Q
    | ||||||||||    
T  29833387 tagtatcagagc 29833398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 1388090 - 1388035
Alignment:
Q  9 ttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaa 65  Q
    |||||||||||||||| |||||   ||||||||||||||||||| ||||||||||||    
T  1388090 ttcaatgttttgtttgtttccgttattgattcataattattgaa-atgttttatgaa 1388035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 8e-33; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 25387583 - 25387473
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    |||||||||||||||||||||||||||||||  |||||||||| || |||||||||||||||||||||||||| | |||||||  || ||||||||||||    
T  25387583 taatcatgttcaatgttttgtttgcttccgctattgattcatatttgttgaacatgttttatgaaatctgtttat-attaagatctatatttccaacaag 25387485  T
Q  101 tggtatcagagc 112  Q
    ||||||||||||    
T  25387484 tggtatcagagc 25387473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 50306269 - 50306365
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||||||||||    
T  50306269 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-attaagacctaaatttccaaca 50306365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1078304 - 1078401
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    |||||||||||||||||||||||||||||||  |||||| |||||| |||||||||| ||||||||||||||| | |||||||| ||||||||||||||    
T  1078304 taatcatgttcaatgttttgtttgcttccgctattgattaataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaacaa 1078401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 34740066 - 34740158
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttcc 94  Q
    |||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||| | |||||||| |||||||||    
T  34740066 taatcatgttcaatgttttgtttgcttccgctattgattcataattgatgaacatgttttatgaaatctgtttat-attaagacctaaatttcc 34740158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 24963778 - 24963671
Alignment:
Q  4 tcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaagtgg 103  Q
    ||||||||||||||||||||||||||||  |||||||||| |  |||||||||||||||||||||||||||| |||||||  ||||||| |||||| |||    
T  24963778 tcatgttcaatgttttgtttgcttccgctattgattcatattcgttgaacatgttttatgaaatctgttttt-attaagatctaaattttcaacaaatgg 24963680  T
Q  104 tatcagagc 112  Q
    ||| |||||    
T  24963679 tattagagc 24963671  T

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Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 44410095 - 44410186
Alignment:
Q  6 atgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    ||||||||||||||||||||||||||  ||||||||||||  |||||||||||||||||||||||||||| | |||||| |||||||||||||    
T  44410095 atgttcaatgttttgtttgcttccgctattgattcataatcgttgaacatgttttatgaaatctgttttt-agtaagacctaaatttccaaca 44410186  T

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Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 38152052 - 38151945
Alignment:
Q  3 atcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaagtg 102  Q
    |||||||||||| ||||||||||||||||  |||||| |||||| |||||||||||||||||||||| ||||  |||||||| |  ||||| ||||||||    
T  38152052 atcatgttcaatattttgtttgcttccgctgttgattaataattgttgaacatgttttatgaaatctatttt--attaagacttggatttctaacaagtg 38151955  T
Q  103 gtatcagagc 112  Q
    ||||||||||    
T  38151954 gtatcagagc 38151945  T

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Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 25381614 - 25381518
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  |||||||||| || |||||||||| ||||||||||||||| | |||||||| || ||||||||||    
T  25381614 taatcatgttcaatgttttgtttgcttccgctattgattcatagttgttgaacatgtattatgaaatctgtttat-attaagacctatatttccaaca 25381518  T

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Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 27955241 - 27955336
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  |||||| || |||||| ||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  27955241 taatcatgttcaatgttttgtttgcttccgctattgatt-atgattattaaacatgttttatgaaatctgttttt-attaagacctaaatttctaaca 27955336  T

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Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31058124 - 31058221
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    |||||||||||||||||||||||||||||||  |||||| |  ||| |||||||||| ||||||||||||||| | |||||||| |||||||| |||||    
T  31058124 taatcatgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttctaacaa 31058221  T

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Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 24926828 - 24926737
Alignment:
Q  6 atgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    ||||||||||||||| ||||||||||  ||||||||||||  |||||||||||||||| ||||||||||| |||||||| ||||||| ||||||    
T  24926828 atgttcaatgttttggttgcttccgctattgattcataatcgttgaacatgttttatg-aatctgttttt-attaagacctaaattttcaacaa 24926737  T

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Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 31051624 - 31051739
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttt-----tatgaaatctgtttttaattaagacataaatttcca 95  Q
    |||||||||||||||||||||||||||||||  |||||| |  ||| |||||||||| |     |||||||||||||| | |||||||| |||||| | |    
T  31051624 taatcatgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattatgatatgaaatctgtttat-attaagacctaaattccta 31051722  T
Q  96 acaagtggtatcagagc 112  Q
    |||||||||||||||||    
T  31051723 acaagtggtatcagagc 31051739  T

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Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 12183663 - 12183562
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataatta-----ttgaacatgttttatgaaatctgtttttaattaagacataaatttcca 95  Q
    |||| ||||||||| |||||||||||||| |  ||||||||||||||     |||||||| ||||||||||||| ||||| |||||||  ||||||||||    
T  12183663 taattatgttcaatattttgtttgcttccactattgattcataattatattgttgaacatattttatgaaatctattttt-attaagaactaaatttcca 12183565  T
Q  96 aca 98  Q
    |||    
T  12183564 aca 12183562  T

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Target: scaffold0012 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 172969 - 172859
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaag 100  Q
    ||||||| |||||||||||||||||||||||  ||||||||||||| | ||||||||||||||||| |||||| | |||||||| ||||||| |||||||    
T  172969 taatcattttcaatgttttgtttgcttccgctattgattcataattgtagaacatgttttatgaaacctgtttat-attaagacctaaattttcaacaag 172871  T
Q  101 tggtatcagagc 112  Q
    | ||||||||||    
T  172870 tagtatcagagc 172859  T

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Target: scaffold0236 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 5615 - 5712
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaacaa 99  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| | || ||||  ||||||||||||||    
T  5615 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-atcaagagctaaatttccaacaa 5712  T

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Target: scaffold0363 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 698 - 605
Alignment:
Q  1 taatcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    |||||||||||||||||||||||||||||||  |||||||||| |||   ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  698 taatcatgttcaatgttttgtttgcttccgctattgattcatagtta---aacatgttttatgaaatctgttttt-attaagacctaaatttccaaca 605  T

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Target: scaffold0085 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 38513 - 38588
Alignment:
Q  6 atgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttttatgaaatctgtttttaattaa 81  Q
    |||||||||||||||||||||||| |  ||||||  |||| ||||||||||| |||||||||||| ||||| ||||    
T  38513 atgttcaatgttttgtttgcttccactgttgatttctaatgattgaacatgtcttatgaaatctggttttatttaa 38588  T

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Target: scaffold1114 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 1198 - 1261
Alignment:
Q  34 ttgattcataattattgaacatgttttatgaaatctgtttttaattaagacataaatttccaaca 98  Q
    ||||||||||||  |||||||||||||||||||||||||||| |||||||  | |||||||||||    
T  1198 ttgattcataatggttgaacatgttttatgaaatctgttttt-attaagatctgaatttccaaca 1261  T

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Target: scaffold0185 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 6006 - 6061
Alignment:
Q  4 tcatgttcaatgttttgtttgcttccgcctttgattcataattattgaacatgttt 59  Q
    ||||||||||||||||||||  | ||||  |||||| |||||||||||||||||||    
T  6006 tcatgttcaatgttttgtttaatgccgctattgattaataattattgaacatgttt 6061  T

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