View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14234_high_54 (Length: 250)

Name: NF14234_high_54
Description: NF14234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14234_high_54
NF14234_high_54
[»] chr1 (12 HSPs)
chr1 (16-233)||(9467999-9468216)
chr1 (86-216)||(34364193-34364321)
chr1 (118-216)||(29677104-29677202)
chr1 (87-128)||(5831644-5831685)
chr1 (100-216)||(42604192-42604308)
chr1 (88-136)||(5855068-5855116)
chr1 (81-128)||(13350938-13350985)
chr1 (86-216)||(25238437-25238566)
chr1 (81-158)||(34490144-34490221)
chr1 (86-128)||(38244813-38244855)
chr1 (81-122)||(2569911-2569952)
chr1 (86-119)||(5855225-5855258)
[»] chr7 (15 HSPs)
chr7 (81-216)||(20556721-20556856)
chr7 (87-216)||(22740678-22740807)
chr7 (97-216)||(21548423-21548542)
chr7 (89-216)||(31303416-31303543)
chr7 (92-214)||(21589589-21589711)
chr7 (87-216)||(18312788-18312916)
chr7 (86-128)||(28805130-28805172)
chr7 (95-216)||(4290796-4290916)
chr7 (86-128)||(22033172-22033214)
chr7 (92-172)||(5083853-5083934)
chr7 (86-122)||(22033020-22033056)
chr7 (86-121)||(32964713-32964748)
chr7 (86-136)||(15958268-15958318)
chr7 (81-122)||(31303570-31303611)
chr7 (138-217)||(46943760-46943839)
[»] chr6 (11 HSPs)
chr6 (88-216)||(3222393-3222521)
chr6 (137-216)||(3620779-3620857)
chr6 (87-216)||(33815035-33815164)
chr6 (86-164)||(23595114-23595193)
chr6 (93-216)||(10304719-10304842)
chr6 (81-128)||(2365657-2365704)
chr6 (86-128)||(2430664-2430706)
chr6 (86-174)||(22608321-22608409)
chr6 (86-128)||(9068517-9068559)
chr6 (87-128)||(11108183-11108224)
chr6 (86-114)||(20084636-20084664)
[»] chr2 (9 HSPs)
chr2 (81-216)||(45305922-45306056)
chr2 (88-216)||(43900490-43900618)
chr2 (81-216)||(30906070-30906205)
chr2 (81-209)||(7378495-7378621)
chr2 (103-216)||(1400793-1400905)
chr2 (81-128)||(1400724-1400771)
chr2 (156-233)||(34175150-34175224)
chr2 (86-136)||(41212411-41212460)
chr2 (88-128)||(28527280-28527320)
[»] chr3 (22 HSPs)
chr3 (93-216)||(5341843-5341966)
chr3 (81-216)||(42637975-42638110)
chr3 (138-217)||(27335401-27335479)
chr3 (86-216)||(19280158-19280287)
chr3 (81-216)||(19624261-19624395)
chr3 (81-216)||(44080211-44080346)
chr3 (81-216)||(3823606-3823742)
chr3 (81-216)||(9710743-9710872)
chr3 (92-183)||(41571809-41571901)
chr3 (81-214)||(1705691-1705822)
chr3 (81-128)||(27079402-27079449)
chr3 (81-128)||(27085199-27085246)
chr3 (137-216)||(42481312-42481390)
chr3 (111-216)||(22432315-22432420)
chr3 (87-216)||(27707635-27707763)
chr3 (116-216)||(31545606-31545706)
chr3 (81-216)||(26308659-26308794)
chr3 (137-216)||(4169124-4169202)
chr3 (118-216)||(13358111-13358208)
chr3 (151-217)||(27326046-27326111)
chr3 (151-217)||(27332283-27332348)
chr3 (151-216)||(34627318-34627382)
[»] chr8 (11 HSPs)
chr8 (86-216)||(15714714-15714844)
chr8 (87-216)||(5321981-5322110)
chr8 (87-214)||(29367076-29367203)
chr8 (81-216)||(38606847-38606982)
chr8 (94-216)||(1240920-1241041)
chr8 (81-216)||(5573735-5573870)
chr8 (81-216)||(1251496-1251630)
chr8 (81-136)||(24575857-24575912)
chr8 (86-172)||(31596755-31596842)
chr8 (87-171)||(33286178-33286263)
chr8 (81-122)||(38606778-38606819)
[»] chr4 (17 HSPs)
chr4 (81-216)||(16583551-16583686)
chr4 (89-216)||(42908532-42908658)
chr4 (87-216)||(33179778-33179907)
chr4 (81-172)||(35544481-35544573)
chr4 (86-214)||(9809034-9809162)
chr4 (81-216)||(17633360-17633495)
chr4 (81-216)||(55666845-55666978)
chr4 (86-122)||(42908685-42908721)
chr4 (86-121)||(14351181-14351216)
chr4 (93-214)||(9810727-9810848)
chr4 (154-216)||(14351091-14351152)
chr4 (86-128)||(24669285-24669327)
chr4 (81-122)||(1966784-1966825)
chr4 (89-216)||(1966852-1966979)
chr4 (81-122)||(19596901-19596942)
chr4 (86-122)||(9810881-9810917)
chr4 (86-122)||(17633297-17633333)
[»] scaffold1126 (1 HSPs)
scaffold1126 (81-174)||(269-363)
[»] scaffold0251 (1 HSPs)
scaffold0251 (87-216)||(10634-10763)
[»] chr5 (16 HSPs)
chr5 (81-216)||(22169412-22169547)
chr5 (81-216)||(31189531-31189667)
chr5 (81-216)||(43461720-43461854)
chr5 (87-216)||(13312560-13312688)
chr5 (92-173)||(36169394-36169476)
chr5 (116-216)||(35922722-35922822)
chr5 (144-216)||(42034775-42034846)
chr5 (138-217)||(7156105-7156183)
chr5 (87-216)||(38521987-38522115)
chr5 (138-233)||(30704383-30704476)
chr5 (81-121)||(19621586-19621626)
chr5 (86-141)||(36169361-36169415)
chr5 (151-233)||(43262690-43262769)
chr5 (151-216)||(19621492-19621556)
chr5 (81-122)||(35922663-35922704)
chr5 (93-137)||(30045951-30045994)
[»] scaffold0043 (1 HSPs)
scaffold0043 (138-218)||(87035-87114)
[»] scaffold0126 (1 HSPs)
scaffold0126 (86-163)||(21551-21629)


Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 9467999 - 9468216
Alignment:
Q  16 atagaaacgcaattacctctatgcatttaaaaatgaataaaaataggttgacattgcaacacaactttcggttaaccaaatatatggtatgtgtgaccat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  9467999 atagaaacgcaattacctctatgcatttaaaaatgaataaaaataggttgacactgcaacacaactttcagttaaccaaatatatggtatgtgtgaccat 9468098  T
Q  116 attttttcagttgtctgaccatatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataaa 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9468099 attttttcagttgtctgaccatatttaaaagctgtaaaatgtgatcacacaactaaaatgtatgtgactactatttttgccacttagttaaccaaataaa 9468198  T
Q  216 tataatgatcacgcaact 233  Q
    ||||||||||||||||||    
T  9468199 tataatgatcacgcaact 9468216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 34364193 - 34364321
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgaccatatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgacta 185  Q
    |||||| ||||||||||| |||||||||||||||| |||||||  || ||||||||| |||||| || ||||| |||||||||||||||  | ||||| |    
T  34364193 gttaactaaatatatggtctgtgtgaccatatttt-tcagttgcgtggccatatttagaagctgaaacatgtggtcacacaactaaaatgaacgtgacca 34364291  T
Q  186 ctatttttgccacttagttaaccaaataaat 216  Q
    | ||||||  |||||||||||||||| ||||    
T  34364292 caattttt-tcacttagttaaccaaaaaaat 34364321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 216
Target Start/End: Complemental strand, 29677202 - 29677104
Alignment:
Q  118 tttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataaat 216  Q
    |||||||||||  |||||| |||||| |||||| |||||||| |||| |||||||||| |  ||||| ||||||||| ||||||||||||||||||||||    
T  29677202 tttttcagttgagtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgtgcgtgaccactattttt-ccacttagttaaccaaataaat 29677104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 5831685 - 5831644
Alignment:
Q  87 ttaaccaaatatatggtatgtgtgaccatattttttcagttg 128  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  5831685 ttaaccaaatatatggtctgtgtgaccatatttttttagttg 5831644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 42604192 - 42604308
Alignment:
Q  100 tggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactatttttgccac 198  Q
    ||||||||||||||| |||||||||||||  | |||| |||||| |||||  ||| | || ||| |||||||||||    ||||| ||||||||| ||||    
T  42604192 tggtatgtgtgaccacattttttcagttgcatcaccactatttagaagcttaaaagtatggtcatacaactaaaatgcgcgtgaccactattttt-ccac 42604290  T
Q  199 ttagttaaccaaataaat 216  Q
    ||||||||| ||||||||    
T  42604291 ttagttaacgaaataaat 42604308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 5855068 - 5855116
Alignment:
Q  88 taaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca 136  Q
    |||||||||||||||| |||||||||| || ||||||||||| ||||||    
T  5855068 taaccaaatatatggtctgtgtgaccacatattttcagttgtgtgacca 5855116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 13350938 - 13350985
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttg 128  Q
    |||| |||||||||||||||||||||||||| ||  ||||||||||||    
T  13350938 tttcagttaaccaaatatatggtatgtgtgatcacgttttttcagttg 13350985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 25238437 - 25238566
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgact 184  Q
    |||||| ||||||||||| | | ||| || |||||||||||||  |||||| |||||| |||||  |||||||| ||||  || |||||| |  || ||     
T  25238437 gttaactaaatatatggtctatatgatcaaattttttcagttgcgtgaccactatttagaagctaaaaaatgtggtcacgtaa-taaaatgtgcgtaacc 25238535  T
Q  185 actatttttgccacttagttaaccaaataaat 216  Q
    ||||||||| ||||||||||||||||||||||    
T  25238536 actattttt-ccacttagttaaccaaataaat 25238566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 34490144 - 34490221
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtg 158  Q
    |||| |||||| ||||||||||| ||||||| || |||||||||||||| |||||| |||||| |||||  ||||||||    
T  34490144 tttcagttaactaaatatatggtctgtgtga-cacattttttcagttgtatgaccactatttagaagctaaaaaatgtg 34490221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 38244855 - 38244813
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttttcagttg 128  Q
    |||| ||||||||||||| |||||||||| |||||||||||||    
T  38244855 gttagccaaatatatggtctgtgtgaccacattttttcagttg 38244813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 2569911 - 2569952
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatatttttt 122  Q
    ||||||||||||||||||||||| |||||||| | |||||||    
T  2569911 tttcggttaaccaaatatatggtctgtgtgactacatttttt 2569952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 119
Target Start/End: Complemental strand, 5855258 - 5855225
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattt 119  Q
    ||||||||||||||||||||||||||||| ||||    
T  5855258 gttaaccaaatatatggtatgtgtgaccacattt 5855225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 5e-31; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 20556721 - 20556856
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatg 179  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||||| |||||| |||||| |||||| |||||||| |||| |||||||||||   |    
T  20556721 tttcagttaaccaaatatatggtcggtgtgaccatattttttcagttgtgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatacgcg 20556820  T
Q  180 tgactactatttttgccacttagttaaccaaataaat 216  Q
    |||| | ||||||| ||||||||||||||||||||||    
T  20556821 tgaccaatattttt-ccacttagttaaccaaataaat 20556856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 22740807 - 22740678
Alignment:
Q  87 ttaaccaaatatatggtatgtgtgaccatatttttt-cagttgtctgaccatatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgacta 185  Q
    ||||| |||||||| || ||||| |||| ||||||| ||||||| ||||||||||||||||||| ||||| || |||| ||||||||||||  ||||  |    
T  22740807 ttaactaaatatatagtttgtgtaaccacatttttttcagttgtgtgaccatatttaaaagctgaaaaatatggtcacgcaactaaaatatgcgtgatca 22740708  T
Q  186 ctatttttgccacttagttaaccaaataaat 216  Q
     ||||||| ||||||||||||||||||||||    
T  22740707 ttattttt-ccacttagttaaccaaataaat 22740678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 21548423 - 21548542
Alignment:
Q  97 atatggtatgtgtgaccatattttttcagttgtctgacc-atatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactatttttgc 195  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| |||| |||||  |||    || || ||| ||||| |    
T  21548423 atatggtatgtgtgaccatattttttcagttgtgtgaccaatatttaaaagctgaaaaatgtggtcacgcaactcgaatgcgcgtaaccactgttttt-c 21548521  T
Q  196 cacttagttaaccaaataaat 216  Q
    |||||||||||||||||||||    
T  21548522 cacttagttaaccaaataaat 21548542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 31303416 - 31303543
Alignment:
Q  89 aaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactact 187  Q
    ||||||||| ||||| || ||||||| ||||||||| |||  |||||| |||||| |||||| |||||||| |||  |||||||||| |  ||||| |||    
T  31303416 aaccaaatacatggtctgcgtgaccacattttttcaattgcgtgaccactatttagaagctgaaaaatgtggtcatgcaactaaaatgtgcgtgaccact 31303515  T
Q  188 atttttgccacttagttaaccaaataaat 216  Q
    |||||| ||||||||||||||||||||||    
T  31303516 attttt-ccacttagttaaccaaataaat 31303543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 214
Target Start/End: Original strand, 21589589 - 21589711
Alignment:
Q  92 caaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactatt 190  Q
    ||||||||| || | ||||||||||||||||||||||| ||| || |||||| |||||| |||||||| |||  ||||||||||   |||||| ||||||    
T  21589589 caaatatattgtctatgtgaccatattttttcagttgtgtgatcactatttagaagctgaaaaatgtggtcatgcaactaaaatgcgtgtgaccactatt 21589688  T
Q  191 tttgccacttagttaaccaaataa 214  Q
    ||| ||||||| |||| |||||||    
T  21589689 ttt-ccacttaattaatcaaataa 21589711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 18312788 - 18312916
Alignment:
Q  87 ttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgacta 185  Q
    |||| |||||||||||| | |||||||| || ||||||||||  | || | |||||| |||||| |||||||| |||| ||||||||||  ||||||| |    
T  18312788 ttaatcaaatatatggtctctgtgaccacatattttcagttgcgtcactactatttagaagctg-aaaatgtgctcacgcaactaaaatgcatgtgacca 18312886  T
Q  186 ctatttttgccacttagttaaccaaataaat 216  Q
    |||||||| |||||||||||||| |||||||    
T  18312887 ctattttt-ccacttagttaacctaataaat 18312916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 28805172 - 28805130
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttttcagttg 128  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  28805172 gttaaccaaatatatggtatgtgtgaccacattttttcagttg 28805130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 4290796 - 4290916
Alignment:
Q  95 atatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactattttt 193  Q
    ||||||||| | | |||||| |||||||||||||  |||||| |||||| ||| || |||||||| |||| |||||||  | |  ||||| |||||||||    
T  4290796 atatatggtttatctgaccacattttttcagttgagtgaccactatttagaagttgaaaaatgtggtcacgcaactaag-tgtgcgtgaccactattttt 4290894  T
Q  194 gccacttagttaaccaaataaat 216  Q
     ||||||||||||||||||||||    
T  4290895 -ccacttagttaaccaaataaat 4290916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 22033214 - 22033172
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttttcagttg 128  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  22033214 gttaaccaaatatatggtctgtgtgaccatattttttgagttg 22033172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 5083934 - 5083853
Alignment:
Q  92 caaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaa 172  Q
    ||||||||||||||||||||||| ||||||||| |||  |||||| |||||| ||| || ||||| || |||| ||||||||    
T  5083934 caaatatatggtatgtgtgaccacattttttcaattgcgtgaccactatttagaagttgaaaaatatggtcacgcaactaaa 5083853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 22033020 - 22033056
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatatttttt 122  Q
    ||||||||||||||||||||||||||||| |||||||    
T  22033020 gttaaccaaatatatggtatgtgtgaccacatttttt 22033056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 121
Target Start/End: Original strand, 32964713 - 32964748
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttt 121  Q
    |||||| |||||||||||||||||||||||||||||    
T  32964713 gttaactaaatatatggtatgtgtgaccatattttt 32964748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 15958268 - 15958318
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca 136  Q
    ||||||||||||||||||  ||||||||| ||||||| |||||| ||||||    
T  15958268 gttaaccaaatatatggtcagtgtgaccacatttttttagttgtgtgacca 15958318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 31303611 - 31303570
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatatttttt 122  Q
    |||| |||||| |||||||||||||||||||||| |||||||    
T  31303611 tttcagttaacaaaatatatggtatgtgtgaccacatttttt 31303570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 46943839 - 46943760
Alignment:
Q  138 atttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactatttttgc-cacttagttaaccaaataaata 217  Q
    ||||| |||||| ||||||||||||| ||||||||||    ||||| |||||||||   ||||||||||||||||||||||    
T  46943839 atttagaagctg-aaaatgtgatcacgcaactaaaatgcgcgtgaccactattttttttcacttagttaaccaaataaata 46943760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 88 - 216
Target Start/End: Original strand, 3222393 - 3222521
Alignment:
Q  88 taaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactac 186  Q
    |||||||||||||||| | |||||||| |||||||||||||  |||||| |||||||| |||| |||||| | |||| |||||||||| || ||||| ||    
T  3222393 taaccaaatatatggtgtctgtgaccacattttttcagttgcgtgaccactatttaaatgctgaaaaatgcggtcacgcaactaaaatgtacgtgaccac 3222492  T
Q  187 tatttttgccacttagttaaccaaataaat 216  Q
    ||||||| ||||||||||||||||||||||    
T  3222493 tattttt-ccacttagttaaccaaataaat 3222521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 3620857 - 3620779
Alignment:
Q  137 tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataaat 216  Q
    |||||| ||| || ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||    
T  3620857 tatttagaagttgaaaaatgtgatcacacaactaaaatatatgtgaccactattttt-tcacttagttaaccaaataaat 3620779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 33815164 - 33815035
Alignment:
Q  87 ttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgacta 185  Q
    ||||| |||||||| || |||||||||| |||||||||||||  |||||| |||||| |||||| |||||||| |||| ||||||||||    ||||| |    
T  33815164 ttaactaaatatatagtctgtgtgaccacattttttcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgacca 33815065  T
Q  186 ctatttttgccacttagttaaccaaataaat 216  Q
    | |||||| ||||||||||||||||||||||    
T  33815064 ccattttt-ccacttagttaaccaaataaat 33815035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 23595114 - 23595193
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcaca 164  Q
    |||||| ||||||||||| |||||||||||||||||| |||||| |||| | |||||| |||||| |||||||| |||||    
T  23595114 gttaactaaatatatggtctgtgtgaccatatttttttagttgtgtgacaactatttagaagctgaaaaatgtggtcaca 23595193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 10304842 - 10304719
Alignment:
Q  93 aaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactattt 191  Q
    ||||||||||| |||||||||| |||||||||||||  ||| || |||||| |||| | |||||  | |||| ||||||||||    ||||| |||||||    
T  10304842 aaatatatggtctgtgtgaccacattttttcagttgcgtgatcactatttagaagcagaaaaatacggtcacgcaactaaaatgcgcgtgaccactattt 10304743  T
Q  192 ttgccacttagttaaccaaataaat 216  Q
    ||  |||||||||||||||||||||    
T  10304742 tt-tcacttagttaaccaaataaat 10304719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 2365704 - 2365657
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttg 128  Q
    |||| ||||||||||||||||||||| ||||||| |||||||||||||    
T  2365704 tttcagttaaccaaatatatggtatgcgtgaccacattttttcagttg 2365657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 2430706 - 2430664
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttttcagttg 128  Q
    |||||||||||||||||| |||||||||| |||||||||||||    
T  2430706 gttaaccaaatatatggtttgtgtgaccacattttttcagttg 2430664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 22608321 - 22608409
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaat 174  Q
    |||||||||||||||||| |||||||| | | |||||||||||  |||||| |||||| |||||| |||||||| |||  ||||||||||    
T  22608321 gttaaccaaatatatggtctgtgtgactaca-tttttcagttgcgtgaccactatttagaagctgaaaaatgtggtcatgcaactaaaat 22608409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 9068559 - 9068517
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttttcagttg 128  Q
    ||||| ||||||||||||||||||||||| ||||||| |||||    
T  9068559 gttaatcaaatatatggtatgtgtgaccacatttttttagttg 9068517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 11108224 - 11108183
Alignment:
Q  87 ttaaccaaatatatggtatgtgtgaccatattttttcagttg 128  Q
    ||||||||||||||| | |||||||||| |||||||||||||    
T  11108224 ttaaccaaatatatgatttgtgtgaccacattttttcagttg 11108183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 114
Target Start/End: Original strand, 20084636 - 20084664
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgacca 114  Q
    |||||||||||||||||||||||||||||    
T  20084636 gttaaccaaatatatggtatgtgtgacca 20084664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 45305922 - 45306056
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgaccatatttaaaagctgtaaaatgtgatcacacaactaaaatatatgt 180  Q
    |||| ||||| ||||||||| || ||| ||||||||||||||||||||  |||||| |||||||||||| ||||||||  ||| |||||||||| |  ||    
T  45305922 tttcagttaatcaaatatatagtctgtatgaccatattttttcagttgcgtgaccacatttaaaagctgaaaaatgtggccacgcaactaaaatgtgcgt 45306021  T
Q  181 gactactatttttgccacttagttaaccaaataaat 216  Q
    ||| ||||||||| |||||||||||||| |||||||    
T  45306022 gaccactattttt-ccacttagttaaccgaataaat 45306056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 88 - 216
Target Start/End: Original strand, 43900490 - 43900618
Alignment:
Q  88 taaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactac 186  Q
    |||| ||||||||||| ||||||| || |||||||||||||| |||||| |||||| |||||| |||||||| |||| ||||||||||  | ||||| ||    
T  43900490 taactaaatatatggtctgtgtgatcacattttttcagttgtgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccac 43900589  T
Q  187 tatttttgccacttagttaaccaaataaat 216  Q
    ||||||| | | ||||||||||||||||||    
T  43900590 tattttt-ctatttagttaaccaaataaat 43900618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 30906205 - 30906070
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatg 179  Q
    |||| |||||||||||||||||| || |||||||   ||||||||||   |||||| |||||||| |||| |||||||| |||| ||||||||||    |    
T  30906205 tttcagttaaccaaatatatggtctgcgtgaccaccatttttcagtttcgtgaccactatttaaatgctgaaaaatgtggtcacgcaactaaaatgcgcg 30906106  T
Q  180 tgactactatttttgccacttagttaaccaaataaat 216  Q
    |||| ||||||||| |||||||||||| |||||||||    
T  30906105 tgaccactattttt-ccacttagttaagcaaataaat 30906070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 209
Target Start/End: Complemental strand, 7378621 - 7378495
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgaccatatttaaaagctgtaaaatgtgatcacacaactaaaatatatgt 180  Q
    |||| |||||| ||||||||||| ||||||||||||||||||||||||  | |||| ||||| |||||  ||||| || | || |||||||||| | |||    
T  7378621 tttcagttaacaaaatatatggtttgtgtgaccatattttttcagttgcgtaaccacatttagaagct-aaaaatatggtgacgcaactaaaatgtgtgt 7378523  T
Q  181 gactactatttttgccacttagttaacca 209  Q
    ||| |||||| || ||||||| |||||||    
T  7378522 gaccactattatt-ccacttaattaacca 7378495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 216
Target Start/End: Complemental strand, 1400905 - 1400793
Alignment:
Q  103 tatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactatttttgccactta 201  Q
    |||||||||||| |||||| ||||||  |||||| |||||| |||||| |||||||| ||||||||| |||||    ||||  ||||||||| |||||||    
T  1400905 tatgtgtgaccacattttt-cagttgcgtgaccactatttagaagctgaaaaatgtggtcacacaacaaaaatgcgcgtgatcactattttt-ccactta 1400808  T
Q  202 gttaaccaaataaat 216  Q
    |||||||||||||||    
T  1400807 gttaaccaaataaat 1400793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 1400724 - 1400771
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttg 128  Q
    |||| ||||||||||||||||||||||||||||| ||||||| |||||    
T  1400724 tttcagttaaccaaatatatggtatgtgtgaccacattttttaagttg 1400771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 34175150 - 34175224
Alignment:
Q  156 gtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataaatataatgatcacgcaact 233  Q
    |||| ||| |||||||||| | ||||||| |||||||| ||||||||||||||||||||  ||| |||||||||||||    
T  34175150 gtgaccacgcaactaaaatgtgtgtgactgctattttt-ccacttagttaaccaaataa--atagtgatcacgcaact 34175224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 41212460 - 41212411
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca 136  Q
    |||||||||||||||||| |||||||||| ||||||| |||||| ||||||    
T  41212460 gttaaccaaatatatggtctgtgtgaccacatttttt-agttgtgtgacca 41212411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 28527280 - 28527320
Alignment:
Q  88 taaccaaatatatggtatgtgtgaccatattttttcagttg 128  Q
    |||||||||||||||| |||||||||| ||||||| |||||    
T  28527280 taaccaaatatatggtctgtgtgaccacatttttttagttg 28527320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 7e-24; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 5341843 - 5341966
Alignment:
Q  93 aaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactattt 191  Q
    ||||||||||| |||||||||||||||||| || ||  |||||| |||||| ||| || |||||||| ||| |||||||||||| || |||| |||||||    
T  5341843 aaatatatggtttgtgtgaccatatttttttagctgcgtgaccactatttagaagttgaaaaatgtggtcatacaactaaaatacatatgaccactattt 5341942  T
Q  192 ttgccacttagttaaccaaataaat 216  Q
    || ||||||||||||||||||||||    
T  5341943 tt-ccacttagttaaccaaataaat 5341966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 42638110 - 42637975
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatg 179  Q
    |||| |||||| ||||||||||||| | |||||| |||||||||||||  |||||| |||||| |||||| |||||||| |||| ||||||||||    |    
T  42638110 tttcagttaactaaatatatggtatatatgaccacattttttcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcg 42638011  T
Q  180 tgactactatttttgccacttagttaaccaaataaat 216  Q
    | || ||||||||| | ||||||||||||||||||||    
T  42638010 taaccactattttt-caacttagttaaccaaataaat 42637975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 27335479 - 27335401
Alignment:
Q  138 atttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataaata 217  Q
    ||||| |||||| |||||||| |||||||||||||||| | ||||| ||||||||| |||||||||||||||||||||||    
T  27335479 atttagaagctgaaaaatgtggtcacacaactaaaatacacgtgaccactattttt-ccacttagttaaccaaataaata 27335401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 19280158 - 19280287
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgact 184  Q
    |||||||||||||||||| || ||||||| |||||||||| ||  |||||| | |||| ||| || |||||||| |||| ||||||||||    |||||     
T  19280158 gttaaccaaatatatggtctgagtgaccacattttttcagatgcgtgaccactgtttagaagttgaaaaatgtggtcacgcaactaaaattcgcgtgacc 19280257  T
Q  185 actatttttgccacttagttaaccaaataaat 216  Q
    ||||||||  ||||||||||||||||||||||    
T  19280258 actatttt--ccacttagttaaccaaataaat 19280287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 19624261 - 19624395
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgaccatatttaaaagctgtaaaatgtgatcacacaactaaaatatatgt 180  Q
    |||| ||||| ||||||||| || |  |||| ||||||| ||||||||| |||||||||||| |||||  || |||||  ||| ||||||||||  | ||    
T  19624261 tttcagttaatcaaatatatagtctaagtgatcatatttcttcagttgtgtgaccatatttataagctaaaatatgtggccacccaactaaaatgcacgt 19624360  T
Q  181 gactactatttttgccacttagttaaccaaataaat 216  Q
    ||| ||||||||| ||||||||||||||| ||||||    
T  19624361 gaccactattttt-ccacttagttaaccacataaat 19624395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 44080211 - 44080346
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatatttttt-cagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatat 178  Q
    |||| |||||||||||||||  | |||||||||||||||||| ||||||  |||||| |||||| ||| || |||||||| ||||| ||||||||| |      
T  44080211 tttcagttaaccaaatatataatctgtgtgaccatattttttgcagttgcgtgaccactatttagaagttgaaaaatgtggtcaca-aactaaaatgtgc 44080309  T
Q  179 gtgactactatttttgccacttagttaaccaaataaat 216  Q
    ||| | ||||||||| ||||||||||||||||| ||||    
T  44080310 gtgcccactattttt-ccacttagttaaccaaaaaaat 44080346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 3823606 - 3823742
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaa--tgtgatcacacaactaaaatata 177  Q
    |||| ||||||||| |||||||| |||||||||| |||||||| ||||  |||||| |||||| |||||| ||||  | || |||| ||||||||||       
T  3823606 tttcagttaaccaattatatggtctgtgtgaccacattttttctgttgcgtgaccactatttataagctgaaaaaaatatggtcacgcaactaaaatgcg 3823705  T
Q  178 tgtgactactatttttgccacttagttaaccaaataaat 216  Q
    |||||| ||| ||||  ||||||||||||||||||||||    
T  3823706 tgtgaccactttttt--ccacttagttaaccaaataaat 3823742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 9710872 - 9710743
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatg 179  Q
    |||| ||||||||||||||||||     ||||||||||||||| ||||  |||||| || ||| |||||| ||| |||| |||| |||||||| || |      
T  9710872 tttcagttaaccaaatatatggt-----tgaccatattttttcggttgcgtgaccactacttagaagctgaaaactgtggtcacgcaactaaa-tacact 9710779  T
Q  180 tgactactatttttgccacttagttaaccaaataaat 216  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  9710778 tgaccactattttt-ccacttagttaaccaaataaat 9710743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 183
Target Start/End: Original strand, 41571809 - 41571901
Alignment:
Q  92 caaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgac 183  Q
    |||||||||||||| ||| |||| ||||||||||||   |||||| |||||||||| || ||||||||||||||||  |||||| || |||||    
T  41571809 caaatatatggtatatgtaaccacattttttcagttacgtgaccactatttaaaagttgaaaaatgtgatcacacagttaaaatgtacgtgac 41571901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 214
Target Start/End: Complemental strand, 1705822 - 1705691
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatg 179  Q
    |||| |||||||||||| ||| ||||||||| |||||||||  |||||  |||||| |||||| |||||| ||||| || |||  ||||||||||    |    
T  1705822 tttcagttaaccaaatacatgatatgtgtgatcatattttt--agttgcgtgaccactatttagaagctgaaaaatatggtcatgcaactaaaatgcgcg 1705725  T
Q  180 tgactactatttttgccacttagttaaccaaataa 214  Q
    |||| ||||||||| || |||||||||||||||||    
T  1705724 tgaccactattttt-ccccttagttaaccaaataa 1705691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 27079449 - 27079402
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttg 128  Q
    ||||||||||||||||||||||| |||||||||| | |||||||||||    
T  27079449 tttcggttaaccaaatatatggtctgtgtgaccacaatttttcagttg 27079402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 27085246 - 27085199
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttg 128  Q
    ||||||||||||||||||||||| |||||||||| | |||||||||||    
T  27085246 tttcggttaaccaaatatatggtctgtgtgaccacaatttttcagttg 27085199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 42481312 - 42481390
Alignment:
Q  137 tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataaat 216  Q
    ||||||||| ||| ||||| || ||||||||||||||| || ||||| | ||||||| | ||||||||||||||||||||    
T  42481312 tatttaaaaactgaaaaatatggtcacacaactaaaatgtacgtgaccattattttt-ctacttagttaaccaaataaat 42481390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 22432315 - 22432420
Alignment:
Q  111 accatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaacca 209  Q
    ||||||||||||||||||  || ||| ||||||||||||| |||||||| |||  ||||||||||   |||| | ||||||||| |||| ||||| ||||    
T  22432315 accatattttttcagttgcgtgtccactatttaaaagctgaaaaatgtggtcaatcaactaaaatgcgtgtgtccactattttt-ccacatagttgacca 22432413  T
Q  210 aataaat 216  Q
    |||||||    
T  22432414 aataaat 22432420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 27707635 - 27707763
Alignment:
Q  87 ttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgaccatatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactac 186  Q
    |||| |||||||||||| |||||| ||| ||||||||| |||| |||||| ||||  || ||  |||||||| || |||||||||||| |   |||| ||    
T  27707635 ttaatcaaatatatggtttgtgtgcccacattttttcaattgtgtgaccacattttgaaactaaaaaatgtggtcgcacaactaaaatgtgcatgaccac 27707734  T
Q  187 tatttttgccacttagttaaccaaataaat 216  Q
    |||||||  |||||  ||||||||||||||    
T  27707735 tattttt-tcacttgattaaccaaataaat 27707763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 216
Target Start/End: Original strand, 31545606 - 31545706
Alignment:
Q  116 attttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataa 214  Q
    |||||||||||||  | |||| |||||| |||||| |||||||| ||||||||||||||| |   |||| ||||||||| | ||||||||||| ||||||    
T  31545606 attttttcagttgagtaaccactatttagaagctgaaaaatgtggtcacacaactaaaatgtgcatgaccactattttt-ctacttagttaacaaaataa 31545704  T
Q  215 at 216  Q
    ||    
T  31545705 at 31545706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 26308794 - 26308659
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatg 179  Q
    |||| ||||| |||||||||||| |||||| ||| |||||| || || |  ||||| |||||| |||||| | |||||| |||| ||| ||||||    |    
T  26308794 tttcagttaatcaaatatatggtttgtgtggccacatttttccaattctgggaccactatttagaagctgaataatgtggtcacgcaattaaaatgcgcg 26308695  T
Q  180 tgactactatttttgccacttagttaaccaaataaat 216  Q
    |||| ||||||||| ||||||| ||||||||||||||    
T  26308694 tgaccactattttt-ccacttacttaaccaaataaat 26308659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 4169202 - 4169124
Alignment:
Q  137 tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataaat 216  Q
    |||||| |||||| |||||||| | || |||||||||| |  ||||| ||||||||| ||| ||||||||||||||||||    
T  4169202 tatttagaagctgaaaaatgtggtaacgcaactaaaatgtgcgtgaccactattttt-ccatttagttaaccaaataaat 4169124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 216
Target Start/End: Complemental strand, 13358208 - 13358111
Alignment:
Q  118 tttttcagttgtctgaccatatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataaat 216  Q
    ||||||| |||  |||||||||||| |||||| ||||| || |||||||| ||||||    || || ||||||||| |||| |||||||||||||||||    
T  13358208 tttttcaattgcatgaccatatttagaagctgaaaaatatggtcacacaattaaaatgcgcgttaccactattttt-ccacatagttaaccaaataaat 13358111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 27326111 - 27326046
Alignment:
Q  151 aaaatgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataaata 217  Q
    |||||||| |||| ||||||||||| ||||||| ||||||||| ||| || |||||| |||||||||    
T  27326111 aaaatgtggtcacgcaactaaaatacatgtgaccactattttt-ccagttggttaactaaataaata 27326046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 27332348 - 27332283
Alignment:
Q  151 aaaatgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataaata 217  Q
    |||||||| |||| ||||||||||| ||||||| ||||||||| ||| || |||||| |||||||||    
T  27332348 aaaatgtggtcacgcaactaaaatacatgtgaccactattttt-ccagttggttaactaaataaata 27332283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 34627382 - 34627318
Alignment:
Q  151 aaaatgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataaat 216  Q
    |||||||| |||| ||||||||||| |||| || | ||||||| ||| ||||||||||||||||||    
T  34627382 aaaatgtggtcacgcaactaaaatacatgtaaccattattttt-ccatttagttaaccaaataaat 34627318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 15714844 - 15714714
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgact 184  Q
    |||||| ||||||||||| ||||| |||| |||||||||| ||| |||| | ||||||||||||| ||||| || ||||  ||||||||| |  |||||     
T  15714844 gttaactaaatatatggtctgtgtaaccacattttttcagctgtgtgactactatttaaaagctgaaaaatatggtcacgtaactaaaatgtccgtgacc 15714745  T
Q  185 actatttttgccacttagttaaccaaataaat 216  Q
    ||||||||| ||||||||||||||||||||||    
T  15714744 actattttt-ccacttagttaaccaaataaat 15714714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 5322110 - 5321981
Alignment:
Q  87 ttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgacta 185  Q
    ||||||||||||||||| ||||||| || ||||||||| |||  ||| || |||||| |||||| ||||| ||||||| ||||||||||    ||||| |    
T  5322110 ttaaccaaatatatggtctgtgtgatcacattttttcaattgcgtgatcattatttagaagctgaaaaatatgatcacgcaactaaaatgcgcgtgacca 5322011  T
Q  186 ctatttttgccacttagttaaccaaataaat 216  Q
    |||||||| ||||||||||||||||||||||    
T  5322010 ctattttt-ccacttagttaaccaaataaat 5321981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 29367203 - 29367076
Alignment:
Q  87 ttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgacta 185  Q
    ||||| ||||||||||| | ||| |||||||||||||| |||| |||||| |||||  |||||| |||||||| |||| ||||||||||    ||||| |    
T  29367203 ttaactaaatatatggtctatgtaaccatattttttcaattgtgtgaccactattttgaagctgaaaaatgtggtcacgcaactaaaatgcgcgtgacca 29367104  T
Q  186 ctatttttgccacttagttaaccaaataa 214  Q
    |||||||| ||||||||||||||||||||    
T  29367103 ctattttt-ccacttagttaaccaaataa 29367076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 38606982 - 38606847
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatg 179  Q
    |||| |||||| | ||||||||| || ||||||| |||||||||||||  | |||| |||||| |||||| |||||||| |||| |||| |||||   ||    
T  38606982 tttcagttaactacatatatggtttgcgtgaccacattttttcagttgcgttaccactatttagaagctgaaaaatgtggtcacgcaacgaaaatgcgtg 38606883  T
Q  180 tgactactatttttgccacttagttaaccaaataaat 216  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  38606882 tgaccactattttt-ccacttagttaaccaaataaat 38606847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 1241041 - 1240920
Alignment:
Q  94 aatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactatttt 192  Q
    |||||||||| |||| |||||||||||||||||||| |||||| |||||| |||||| |||||||| |||   ||||||||| |  ||||| |||| |||    
T  1241041 aatatatggtgtgtgagaccatattttttcagttgtgtgaccactatttagaagctgaaaaatgtggtca-tgaactaaaatgtgcgtgaccacta-ttt 1240944  T
Q  193 tgccacttagttaaccaaataaat 216  Q
    | ||||||||||||||||||||||    
T  1240943 tcccacttagttaaccaaataaat 1240920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 5573735 - 5573870
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatg 179  Q
    |||| |||||||||||||||| ||| |||||| | ||||||||| |||  |||||| |||||| ||| || |||||||| |||   |||||||||  | |    
T  5573735 tttcagttaaccaaatatatgatatatgtgactacattttttcaattgcgtgaccactatttagaagttgaaaaatgtggtcatggaactaaaatgcacg 5573834  T
Q  180 tgactactatttttgccacttagttaaccaaataaat 216  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  5573835 tgaccactattttt-ccacttagttaaccaaataaat 5573870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 1251630 - 1251496
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatg 179  Q
    |||| |||||| ||||||||| | |||| ||||| |||||||||||||  |||||| ||||||||| ||| ||||||||||||   ||||||||| |  |    
T  1251630 tttcagttaactaaatatatgatttgtgagaccacattttttcagttgcgtgaccactatttaaaacctgaaaaatgtgatca-tgaactaaaatgtgcg 1251532  T
Q  180 tgactactatttttgccacttagttaaccaaataaat 216  Q
     ||| |||| |||| ||||||||||||||||||||||    
T  1251531 cgaccacta-ttttcccacttagttaaccaaataaat 1251496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 24575857 - 24575912
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca 136  Q
    ||||||||||||||||||||||| |||| ||||||||| ||| |||||||||||||    
T  24575857 tttcggttaaccaaatatatggtctgtgcgaccatattattttagttgtctgacca 24575912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 31596755 - 31596842
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaa 172  Q
    ||||| ||||||||||||||||||||||| |||||||||||||  | |||| |||||| ||| || |||||||| ||| |||||||||    
T  31596755 gttaatcaaatatatggtatgtgtgaccacattttttcagttgcgttaccactatttagaagatgaaaaatgtggtcagacaactaaa 31596842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 171
Target Start/End: Original strand, 33286178 - 33286263
Alignment:
Q  87 ttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaa 171  Q
    ||||||||||||||||| || ||||||| ||||||||| |||  |||||| | |||| |||||| |||||||| |||| |||||||    
T  33286178 ttaaccaaatatatggtctgcgtgaccacattttttcaattgcgtgaccactttttagaagctgaaaaatgtggtcacgcaactaa 33286263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 38606778 - 38606819
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatatttttt 122  Q
    |||| |||||| ||||||||||||||||||||||||||||||    
T  38606778 tttcagttaactaaatatatggtatgtgtgaccatatttttt 38606819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 16583551 - 16583686
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatg 179  Q
    |||| ||||||||||||||||||   |||||||| |||||||||||||  |||||| |||||| |||||| ||||| ||||||  ||||||||||    |    
T  16583551 tttcagttaaccaaatatatggttgatgtgaccacattttttcagttgcgtgaccactatttagaagctgaaaaatatgatcatgcaactaaaatgcgcg 16583650  T
Q  180 tgactactatttttgccacttagttaaccaaataaat 216  Q
    |||| ||||||||| ||||||| ||||||||||||||    
T  16583651 tgaccactattttt-ccacttaattaaccaaataaat 16583686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 42908532 - 42908658
Alignment:
Q  89 aaccaaatatatggtatgtgtgaccatattttttcagttgtctgaccatatttaaaagctg-taaaatgtgatcacacaactaaaatatatgtgactact 187  Q
    ||||||||||||||| ||| |||||||| |||||||||||| |||||| ||||||||| ||  ||||||||||||| ||||||||||    ||||| |||    
T  42908532 aaccaaatatatggtctgtttgaccata-tttttcagttgtgtgaccacatttaaaagttgaaaaaatgtgatcacgcaactaaaatgcgcgtgaccact 42908630  T
Q  188 atttttgccacttagttaaccaaataaat 216  Q
    || ||| || |||||||||||||||||||    
T  42908631 atgttt-cctcttagttaaccaaataaat 42908658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 33179907 - 33179778
Alignment:
Q  87 ttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgacta 185  Q
    ||||| ||||||||||||||||| ||||||| ||||||| ||  |||||| |||||| ||  || ||||||||  ||||||||||||||   |||||| |    
T  33179907 ttaactaaatatatggtatgtgttaccatatcttttcagctgcgtgaccactatttagaaagtgaaaaatgtggccacacaactaaaatgcgtgtgacca 33179808  T
Q  186 ctatttttgccacttagttaaccaaataaat 216  Q
    |||||||| |||||||||||| |||||||||    
T  33179807 ctattttt-ccacttagttaatcaaataaat 33179778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 172
Target Start/End: Complemental strand, 35544573 - 35544481
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaa 172  Q
    |||| ||||| |||||||||||||||||||| || |||||||| ||||| |||||| |||||| |||||| |||||||| |||| ||||||||    
T  35544573 tttcagttaatcaaatatatggtatgtgtgatcacattttttccgttgtatgaccactatttagaagctgaaaaatgtggtcacgcaactaaa 35544481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 214
Target Start/End: Original strand, 9809034 - 9809162
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgact 184  Q
    |||||| ||||||||||| || ||||||| |||||||||||||  |||||| |||||| |||||| |||||||  |||| ||||| ||||    |||||     
T  9809034 gttaactaaatatatggtctgcgtgaccacattttttcagttgcgtgaccactatttagaagctgaaaaatgtagtcacgcaactcaaatgcgcgtgacc 9809133  T
Q  185 actatttttgccacttagttaaccaaataa 214  Q
    ||||||||| ||| ||||||||||||||||    
T  9809134 actattttt-ccatttagttaaccaaataa 9809162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 17633495 - 17633360
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgaccatatttaaaag-ctgtaaaatgtgatcacacaactaaaatatatg 179  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||||  |||||| || || |||  || ||||| || |||| ||||||||||    |    
T  17633495 tttcagttaaccaaatatatggtctgtgtgaccacattttttcagttgcgtgaccacatctagaagtttgaaaaatatggtcacgcaactaaaatgcgcg 17633396  T
Q  180 tgactactatttttgccacttagttaaccaaataaat 216  Q
    |||| |||||||||   ||||||||||||||||||||    
T  17633395 tgaccactattttt-taacttagttaaccaaataaat 17633360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 55666978 - 55666845
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatg 179  Q
    |||| |||||| ||||||||||| |||||||||| | |||||||||||  |||||| |||||| |||||| |||| ||| ||||  ||||||||| |  |    
T  55666978 tttcagttaactaaatatatggtctgtgtgaccaca-tttttcagttgcgtgaccattatttataagctgaaaaacgtggtcac-gaactaaaatgttcg 55666881  T
Q  180 tgactactatttttgccacttagttaaccaaataaat 216  Q
    |||| ||||||||| |||||||||||| |||||||||    
T  55666880 tgaccactattttt-ccacttagttaagcaaataaat 55666845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 42908721 - 42908685
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatatttttt 122  Q
    ||||||||||||||||||||||||||||| |||||||    
T  42908721 gttaaccaaatatatggtatgtgtgaccacatttttt 42908685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 14351216 - 14351181
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttt 121  Q
    |||||||||||||||||| |||||||||||||||||    
T  14351216 gttaaccaaatatatggtttgtgtgaccatattttt 14351181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 214
Target Start/End: Original strand, 9810727 - 9810848
Alignment:
Q  93 aaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactattt 191  Q
    ||||||||||| || || |||| |||||||||||||  |||||| |||||| |||||  |||||||  |||| ||||| |||| |  |||||  ||||||    
T  9810727 aaatatatggtttgcgttaccacattttttcagttgcgtgaccactatttagaagctaaaaaatgtagtcacgcaactcaaatgtgcgtgacctctattt 9810826  T
Q  192 ttgccacttagttaaccaaataa 214  Q
    || ||| ||||||||||||||||    
T  9810827 tt-ccatttagttaaccaaataa 9810848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 216
Target Start/End: Original strand, 14351091 - 14351152
Alignment:
Q  154 atgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataaat 216  Q
    |||||||||| |||||||||| |   |||| ||||||||| ||||||||||||||||||||||    
T  14351091 atgtgatcacgcaactaaaatgtccatgaccactattttt-ccacttagttaaccaaataaat 14351152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 24669327 - 24669285
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttttcagttg 128  Q
    ||||| |||||||||||| |||||||||| |||||||||||||    
T  24669327 gttaatcaaatatatggtctgtgtgaccacattttttcagttg 24669285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 1966784 - 1966825
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatatttttt 122  Q
    |||| |||||||||||||||||| |||||||||| |||||||    
T  1966784 tttcagttaaccaaatatatggtctgtgtgaccacatttttt 1966825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 1966979 - 1966852
Alignment:
Q  89 aaccaaatatatggtatgtgtgaccatattttttc-agttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactac 186  Q
    |||||||||||||  || |||||||| |||||||  |||||  |||||| |||||| |||||| |||||||| |||| |||||||| |    ||||| ||    
T  1966979 aaccaaatatatgacatatgtgaccacattttttttagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaa-tgcgcgtgaccac 1966881  T
Q  187 tatttttgccacttagttaaccaaataaat 216  Q
    ||||||| ||||||| ||||||||||||||    
T  1966880 tattttt-ccacttaattaaccaaataaat 1966852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 19596942 - 19596901
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatatttttt 122  Q
    |||| ||||||||||||||||||| ||||||||| |||||||    
T  19596942 tttcagttaaccaaatatatggtacgtgtgaccacatttttt 19596901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 9810917 - 9810881
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatatttttt 122  Q
    |||||||||||||||||| |||||||||| |||||||    
T  9810917 gttaaccaaatatatggtctgtgtgaccacatttttt 9810881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 17633297 - 17633333
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatatttttt 122  Q
    |||||||||||||||||| |||||||||| |||||||    
T  17633297 gttaaccaaatatatggtctgtgtgaccacatttttt 17633333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1126 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1126
Description:

Target: scaffold1126; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 174
Target Start/End: Complemental strand, 363 - 269
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaat 174  Q
    |||| |||||||||||||||||| |||||| ||| | |||||||||||  |||||| |||||| |||||| |||||||| |||| ||||||||||    
T  363 tttcagttaaccaaatatatggtctgtgtggccacactttttcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaat 269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 10763 - 10634
Alignment:
Q  87 ttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgacta 185  Q
    ||||||||||||||||| |  ||||| ||||||||| |||||  |||||| |||||||||  |  |||||||| |||| |||||||||||   ||||| |    
T  10763 ttaaccaaatatatggtctaggtgactatattttttaagttgcatgaccactatttaaaaaataaaaaatgtggtcacgcaactaaaatacccgtgacca 10664  T
Q  186 ctatttttgccacttagttaaccaaataaat 216  Q
     ||||||| ||||||||||||||||||||||    
T  10663 ttattttt-ccacttagttaaccaaataaat 10634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 22169412 - 22169547
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatg 179  Q
    |||| |||||| |||||||||| || ||||| || |||||||||||||  |||||| |||||| ||| || |||||||| |||| ||||||||||    |    
T  22169412 tttcagttaactaaatatatggaatatgtgatcacattttttcagttgcgtgaccactatttataagttgaaaaatgtggtcacgcaactaaaatgcgcg 22169511  T
Q  180 tgactactatttttgccacttagttaaccaaataaat 216  Q
    |||| ||||||||| | || |||||||||||||||||    
T  22169512 tgaccactattttt-caacgtagttaaccaaataaat 22169547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 31189531 - 31189667
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatatttttt--cagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatata 177  Q
    |||| ||||||||||||||| ||||||||||||| ||||||   || |||  |||  | |||||| |||||| ||||||||||||| |||||||||| |     
T  31189531 tttcagttaaccaaatatatagtatgtgtgaccacatttttgtccaattgcatgattactatttagaagctgaaaaatgtgatcacgcaactaaaatgtt 31189630  T
Q  178 tgtgactactatttttgccacttagttaaccaaataaat 216  Q
    |||||| ||||||||  |||||| ||||| |||||||||    
T  31189631 tgtgaccactatttt--ccacttggttaatcaaataaat 31189667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 43461854 - 43461720
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatg 179  Q
    |||| ||||| |||||||||||| | || |||||||||||||||||||| |||||| |||||| ||| || |||||  | |||| ||||||||||  | |    
T  43461854 tttcagttaatcaaatatatggtctttg-gaccatattttttcagttgtgtgaccactatttagaagttgaaaaatacggtcacgcaactaaaattcacg 43461756  T
Q  180 tgactactatttttgccacttagttaaccaaataaat 216  Q
    | || ||||||||| ||||||||| ||||||||||||    
T  43461755 taaccactattttt-ccacttagtaaaccaaataaat 43461720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 13312560 - 13312688
Alignment:
Q  87 ttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgacta 185  Q
    ||||||||||||||||| | ||||| || |||||| ||||||  |||||  |||||| |||||| |||||||| |||| ||||||||||    ||| | |    
T  13312560 ttaaccaaatatatggtctatgtgaacacattttt-cagttgggtgaccgctatttagaagctgaaaaatgtggtcacgcaactaaaatgcgcgtggcaa 13312658  T
Q  186 ctatttttgccacttagttaaccaaataaat 216  Q
    |||||||| ||||||||||||||||||||||    
T  13312659 ctattttt-ccacttagttaaccaaataaat 13312688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 36169476 - 36169394
Alignment:
Q  92 caaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaa 173  Q
    ||||||||||||||||||||||| ||| |||||||||  |||||| |||||| |||||| ||||| || |||| |||||||||    
T  36169476 caaatatatggtatgtgtgaccacattctttcagttgcgtgaccactatttagaagctgaaaaatatggtcacgcaactaaaa 36169394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 216
Target Start/End: Original strand, 35922722 - 35922822
Alignment:
Q  116 attttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataa 214  Q
    |||||||||||||  |||||| |||||| |||||| |||||||| |||| ||||||||||   | |||| ||||||||| ||| ||||||||||||||||    
T  35922722 attttttcagttgcgtgaccactatttagaagctgaaaaatgtggtcacgcaactaaaatgcgtatgaccactattttt-ccatttagttaaccaaataa 35922820  T
Q  215 at 216  Q
    ||    
T  35922821 at 35922822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 42034775 - 42034846
Alignment:
Q  144 aagctgtaaaatgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataaat 216  Q
    |||||| |||||||| |||| ||||||||||  | ||||| ||||||||| ||||||||||||||||||||||    
T  42034775 aagctgaaaaatgtggtcacgcaactaaaatgcacgtgaccactattttt-ccacttagttaaccaaataaat 42034846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 7156105 - 7156183
Alignment:
Q  138 atttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataaata 217  Q
    ||||| |||||| ||||||||||| | ||||||||||||  ||||| | ||||||| ||||||| |||||||||||||||    
T  7156105 atttagaagctgaaaaatgtgatcgcgcaactaaaatatgcgtgaccattattttt-ccacttaattaaccaaataaata 7156183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 38522115 - 38521987
Alignment:
Q  87 ttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgacta 185  Q
    ||||||||||||||||| | |||||||| ||||||||| |||  |||||| |||||| |||||| |||||||| |||| | | ||||||    ||||| |    
T  38522115 ttaaccaaatatatggtctatgtgaccacattttttcaattgcatgaccactatttagaagctgaaaaatgtggtcacgcga-taaaatgcgcgtgacca 38522017  T
Q  186 ctatttttgccacttagttaaccaaataaat 216  Q
    ||||||||  |||||||||||| ||||||||    
T  38522016 ctattttt-acacttagttaactaaataaat 38521987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 30704476 - 30704383
Alignment:
Q  138 atttaaaagctgtaaaa-tgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataaatataatgatcacgcaact 233  Q
    |||||||||||| |||| |||| || ||||||||||||    ||||| ||||||||| ||||||||||||||||||||  ||| |||||||||||||    
T  30704476 atttaaaagctgaaaaaatgtggtcgcacaactaaaatgcgcgtgaccactattttt-ccacttagttaaccaaataa--atagtgatcacgcaact 30704383  T

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Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 19621626 - 19621586
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatattttt 121  Q
    |||| ||||||||||||||||||||||||||||| ||||||    
T  19621626 tttcagttaaccaaatatatggtatgtgtgaccacattttt 19621586  T

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Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 141
Target Start/End: Original strand, 36169361 - 36169415
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgaccatattt 141  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||  |||||||||||    
T  36169361 gttaaccaaatatatggtaggtgtgaccacatttttt-agttgcgtgaccatattt 36169415  T

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Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 43262769 - 43262690
Alignment:
Q  151 aaaatgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataaatataatgatcacgcaact 233  Q
    |||||||| |||||||||||||||    ||||| ||||||||| ||||||||||||||||||  | |||||| ||||||||||    
T  43262769 aaaatgtggtcacacaactaaaatgcgcgtgaccactattttt-ccacttagttaaccaaat--agataatggtcacgcaact 43262690  T

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Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 19621556 - 19621492
Alignment:
Q  151 aaaatgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataaat 216  Q
    |||| ||| |||| |||||||||| |  ||||| ||||||||| ||||||||||||||||||||||    
T  19621556 aaaacgtggtcacgcaactaaaatgtgcgtgaccactattttt-ccacttagttaaccaaataaat 19621492  T

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Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 35922663 - 35922704
Alignment:
Q  81 tttcggttaaccaaatatatggtatgtgtgaccatatttttt 122  Q
    |||| ||||| ||||||||||||||||||||||| |||||||    
T  35922663 tttcagttaatcaaatatatggtatgtgtgaccacatttttt 35922704  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 30045994 - 30045951
Alignment:
Q  93 aaatatatggtatgtgtgaccatattttttcagttgtctgaccat 137  Q
    |||||||||||||||||||| ||| |||||||||||| |||||||    
T  30045994 aaatatatggtatgtgtgactata-tttttcagttgtgtgaccat 30045951  T

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Target: scaffold0043 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 87035 - 87114
Alignment:
Q  138 atttaaaagctgtaaaatgtgatcacacaactaaaatatatgtgactactatttttgccacttagttaaccaaataaatat 218  Q
    ||||| || ||| |||||||| |||| ||||||||||| | ||||| ||||||||| | ||||||||||||||||||||||    
T  87035 atttagaaactgaaaaatgtggtcacgcaactaaaatacacgtgaccactattttt-ctacttagttaaccaaataaatat 87114  T

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Target: scaffold0126 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 21629 - 21551
Alignment:
Q  86 gttaaccaaatatatggtatgtgtgaccatattttttcagttgtctgacca-tatttaaaagctgtaaaatgtgatcac 163  Q
    ||||||| |||||||||| |||||||||| |||||||||||||  |||||| ||| || |||||| |||||||| ||||    
T  21629 gttaaccgaatatatggtctgtgtgaccacattttttcagttgcgtgaccactatatagaagctgaaaaatgtggtcac 21551  T

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